Prupe.3G291000_v2.0.a1

Denticleless protein homolog

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
26092921 .. 26097916
4996 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G291000.1

Sequence Viewer

Length: 1536 bp
ATGGAGATCTCAAAGCCCCAATCGTTCTTCCAAGACATCAGATCCAGAGAGCTACATGGATTCAGAGCTCCAAAGCGACCGTACATCAATGGCCTGGCATCAGATTTCCATGAAATTGGGGCCATTGCTGCTGAACACAACGGCCCTCCAATGGCGATTTCGTTTGGCAAGACGTGTAAAAACTCTGACATTGTCGCAATGTCAGACGAAGATGGGTACTTGAGCTTGTTCGATACACGTCGCAAGTTCTCTGCATCAGCATCTTTCCAAGAAAATGCAGATAAAACTAAGGTGTGTGATTGGGTTGCACATCAAAATGCTGTGTTTGACGTCTGTTGGATTAAGGATGATACTCAAATTATGACAGCTTCTGGTGATCAAACTATCAAGGTATGGGATATTCAGGAAAAGAAATGTACTGCAATACTGATGGGGCACACAGGAAGTGTGAAATCTCTCTGTCCTCATCCAACTAATCCTGAGATTATTGTCTCTGGTTCGAGAGATGGCTCCTTTGCTCTTTGGGATATGAGATGTAATTCAAGCTCCAAAAATATTCACGGGGAGATTGCAATATGCTCAACTGCTGTGGTTAAAGGGGCTCATCTTTTTCCACGGGCAAAGCGTGTAAGGCGCGGAAAGGCTGCTTCCATGAGCATCACATCAGTTCTTTATCTTAAAGACGAGGTTTCCATTGCTACTGCTGGAGCTGTGGACAGCATTGTCAAGTTTTGGGATACTAGAAGTTTGAAAAATGTCGTCACACAGACATCCCCTCACCTTGAGTCTACTGAGAAGGAAAGAAGATTACATGGTATAACTAGCTTATCCCAAGATTTAAACGGAGTGTTTATTTCAGCCTCATGTATGGACAACAGAATATATTTGTATAATGTACTTCAGCTACAAAAGGGTCCTATGCAATCTTTCAGTGGATGTAGGATTGAATCTTTTTTTGTGAAGTCAGTTCTTAGCCCTGATGCTGCTCACATGCTCAGTGGTTCCAGCGATGGAAATGCCTATATTTGGCAGGTAAACAAGCCTCAAGAAGATCCTGTAATATTGAAAAGCCATGACGGAGAAGTTACAGCAGTGGATTGGTCCCATTTTGAGGTTGGGAAGATGGCAACTTCTTCGGATGATTTTACAGTTCGCATTTGGAACTCTCAGAATAGTTACGGCCCAAGCACAAACTCACCATCTGTCATCCGGAGGAGAGTCATGGCAATCCCAGGTGCAGAATGTAGAAAGCTTCTAATGAATGAATCAATTCATACGTCAAAGGACTCTGGAAATTTGTGTCCGTCAGACGACGGATTGGATGAATCTAGTTCAAGAAAACCAATTAAAATGCCGAAAATCAGTACTCCCCAATCTCAGAAGAAACAATCTATGGCAGATTCTGACTTTATTGAAACCTTTGAAAAGACCCCAGAAGCTGCGTTGAAGAGCCCTTCTTCTGTTCTGAACCCTCCTTCCTCTCTAAAAAGGAAAACAATCCGAGATTACTTTGGAGTACCTACTTTAAACTTGTAG

Protein Analysis

512

Amino Acids

56.43

Weight (kDa)

8.37

Isoelectric Point (pI)

47.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 722
AatII GACGTC 1 cut(s) 333
Acc36I ACCTGC 1 cut(s) 1021
AccI GTMKAC 1 cut(s) 788
AccII CGCG 1 cut(s) 636
AccIII TCCGGA 1 cut(s) 1209
AciI CCGC 1 cut(s) 636
AclWI GGATC 2 cut(s) 36, 1046
AcsI RAATTY 1 cut(s) 1294
AcuI CTGAAG 1 cut(s) 884
AcyI GRCGYC 1 cut(s) 330
AfaI GTAC 6 cut(s) 83, 218, 418, 897, 1366, 1518
AfiI CCNNNNNNNGG 3 cut(s) 151, 1026, 1111
AflIII ACRYGT 2 cut(s) 173, 236
AgsI TTSAA 8 cut(s) 543, 751, 947, 1066, 1335, 1415, 1424, 1447
AjiI CACGTC 2 cut(s) 174, 239
AjnI CCWGG 2 cut(s) 93, 1231
AjuI GAANNNNNNNTTGG 2 cut(s) 142, 174
AloI GAACNNNNNNTCC 2 cut(s) 1460, 1492
Alw21I GWGCWC 1 cut(s) 70
Alw26I GTCTC 1 cut(s) 496
AlwI GGATC 2 cut(s) 36, 1046
AlwNI CAGNNNCTG 3 cut(s) 371, 1403, 1439
Aor13HI TCCGGA 1 cut(s) 1209
AoxI GGCC 4 cut(s) 91, 120, 142, 1180
ApeKI GCWGC 4 cut(s) 128, 644, 983, 1439
ApoI RAATTY 1 cut(s) 1294
Asp700I GAANNNNTTC 1 cut(s) 1269
AspLEI GCGC 1 cut(s) 636
AspS9I GGNCC 5 cut(s) 120, 143, 914, 1101, 1181
AsuHPI GGTGA 3 cut(s) 386, 770, 1188
AvaII GGWCC 2 cut(s) 914, 1101
BaeGI GKGCMC 1 cut(s) 438
BanII GRGCYC 3 cut(s) 70, 604, 1454
Bbv12I GWGCWC 1 cut(s) 70
BbvI GCAGC 4 cut(s) 115, 631, 970, 1426
BccI CCATC 6 cut(s) 206, 424, 500, 1004, 1117, 1207
BceAI ACGGC 2 cut(s) 157, 1195
BcgI CGANNNNNNTGC 4 cut(s) 998, 1032, 1116, 1150
BciT130I CCWGG 2 cut(s) 95, 1233
BciVI GTATCC 1 cut(s) 730
BclI TGATCA 1 cut(s) 376
BcoDI GTCTC 1 cut(s) 496
BfaI CTAG 3 cut(s) 741, 822, 1329
BfuAI ACCTGC 1 cut(s) 1021
BfuI GTATCC 1 cut(s) 730
BglII AGATCT 1 cut(s) 6
BisI GCNGC 4 cut(s) 129, 645, 984, 1440
BlsI GCNGC 4 cut(s) 130, 646, 985, 1441
BmcAI AGTACT 1 cut(s) 1366
Bme1390I CCNGG 2 cut(s) 95, 1233
Bme18I GGWCC 2 cut(s) 914, 1101
BmgBI CACGTC 2 cut(s) 174, 239
BmgT120I GGNCC 5 cut(s) 120, 143, 914, 1101, 1181
BmiI GGNNCC 5 cut(s) 121, 511, 915, 1003, 1103
BmrFI CCNGG 2 cut(s) 95, 1233
BmsI GCATC 5 cut(s) 107, 263, 269, 666, 970
BpmI CTGGAG 1 cut(s) 726
BpuEI CTTGAG 3 cut(s) 241, 803, 1029
BsaHI GRCGYC 1 cut(s) 330
BsaJI CCNNGG 2 cut(s) 614, 1231
BsaWI WCCGGW 1 cut(s) 1209
Bsc4I CCNNNNNNNGG 3 cut(s) 151, 1026, 1111
Bse3DI GCAATG 3 cut(s) 123, 204, 693
BseAI TCCGGA 1 cut(s) 1209
BseBI CCWGG 2 cut(s) 95, 1233
BseDI CCNNGG 2 cut(s) 614, 1231
BseGI GGATG 7 cut(s) 352, 466, 770, 941, 1144, 1206, 1327
BseLI CCNNNNNNNGG 3 cut(s) 151, 1026, 1111
BseMI GCAATG 3 cut(s) 123, 204, 693
BseMII CTCAG 5 cut(s) 471, 783, 1009, 1181, 1391
BseRI GAGGAG 1 cut(s) 1228
BseSI GKGCMC 1 cut(s) 438
BseXI GCAGC 4 cut(s) 115, 631, 970, 1426
BsgI GTGCAG 1 cut(s) 1257
Bsh1236I CGCG 1 cut(s) 636
Bsh1285I CGRYCG 1 cut(s) 80
BshFI GGCC 4 cut(s) 93, 122, 144, 1182
BsiEI CGRYCG 1 cut(s) 80
BsiHKAI GWGCWC 1 cut(s) 70
BsiSI CCGG 1 cut(s) 1210
BslFI GGGAC 1 cut(s) 1087
BslI CCNNNNNNNGG 3 cut(s) 151, 1026, 1111
BsmAI GTCTC 1 cut(s) 496
BsmFI GGGAC 1 cut(s) 1087
BsnI GGCC 4 cut(s) 93, 122, 144, 1182
Bsp1286I GDGCHC 4 cut(s) 70, 438, 604, 1454
Bsp13I TCCGGA 1 cut(s) 1209
Bsp143I GATC 4 cut(s) 6, 41, 376, 1051
BspACI CCGC 1 cut(s) 636
BspANI GGCC 4 cut(s) 93, 122, 144, 1182
BspCNI CTCAG 5 cut(s) 472, 784, 1008, 1180, 1390
BspEI TCCGGA 1 cut(s) 1209
BspFNI CGCG 1 cut(s) 636
BspLI GGNNCC 5 cut(s) 121, 511, 915, 1003, 1103
BspMI ACCTGC 1 cut(s) 1021
BspPI GGATC 2 cut(s) 36, 1046
BspQI GCTCTTC 1 cut(s) 1442
BsrDI GCAATG 3 cut(s) 123, 204, 693
BssECI CCNNGG 2 cut(s) 614, 1231
BssMI GATC 4 cut(s) 6, 41, 376, 1051
BssNI GRCGYC 1 cut(s) 330
Bst2UI CCWGG 2 cut(s) 95, 1233
Bst4CI ACNGT 2 cut(s) 81, 1150
Bst6I CTCTTC 1 cut(s) 1442
BstACI GRCGYC 1 cut(s) 330
BstDEI CTNAG 7 cut(s) 288, 480, 792, 971, 995, 1167, 1377
BstDSI CCRYGG 1 cut(s) 614
BstF5I GGATG 7 cut(s) 352, 466, 770, 941, 1144, 1206, 1327
BstFNI CGCG 1 cut(s) 636
BstHHI GCGC 1 cut(s) 636
BstKTI GATC 4 cut(s) 9, 44, 379, 1054
BstMAI GTCTC 1 cut(s) 496
BstMBI GATC 4 cut(s) 6, 41, 376, 1051
BstMCI CGRYCG 1 cut(s) 80
BstMWI GCNNNNNNNGC 2 cut(s) 128, 631
BstNI CCWGG 2 cut(s) 95, 1233
BstNSI RCATGY 1 cut(s) 994
BstSCI CCNGG 2 cut(s) 93, 1231
BstSLI GKGCMC 1 cut(s) 438
BstUI CGCG 1 cut(s) 636
BstV1I GCAGC 4 cut(s) 115, 631, 970, 1426
BstX2I RGATCY 3 cut(s) 6, 41, 1051
BstXI CCANNNNNNTGG 1 cut(s) 116
BstYI RGATCY 3 cut(s) 6, 41, 1051
BsuI GTATCC 1 cut(s) 730
BsuRI GGCC 4 cut(s) 93, 122, 144, 1182
BtgI CCRYGG 1 cut(s) 614
BtgZI GCGATG 1 cut(s) 1023
BtrI CACGTC 2 cut(s) 174, 239
BtsCI GGATG 7 cut(s) 352, 466, 770, 941, 1144, 1206, 1327
BtsI GCAGTG 1 cut(s) 1098
BtsIMutI CAGTG 3 cut(s) 937, 1003, 1098
BveI ACCTGC 1 cut(s) 1021
CaiI CAGNNNCTG 3 cut(s) 371, 1403, 1439
CfoI GCGC 1 cut(s) 636
Cfr13I GGNCC 5 cut(s) 120, 143, 914, 1101, 1181
Csp6I GTAC 6 cut(s) 82, 217, 417, 896, 1365, 1517
CspCI CAANNNNNGTGG 2 cut(s) 570, 605
CviAII CATG 8 cut(s) 56, 110, 652, 812, 864, 991, 1073, 1222
CviQI GTAC 6 cut(s) 82, 217, 417, 896, 1365, 1517
DdeI CTNAG 7 cut(s) 288, 480, 792, 971, 995, 1167, 1377
DpnI GATC 4 cut(s) 8, 43, 378, 1053
DpnII GATC 4 cut(s) 6, 41, 376, 1051
DraI TTTAAA 2 cut(s) 840, 1527
DrdI GACNNNNNNGTC 1 cut(s) 722
DseDI GACNNNNNNGTC 1 cut(s) 722
Eam1104I CTCTTC 1 cut(s) 1442
EarI CTCTTC 1 cut(s) 1442
Ecl136II GAGCTC 1 cut(s) 68
Eco24I GRGCYC 3 cut(s) 70, 604, 1454
Eco47I GGWCC 2 cut(s) 914, 1101
Eco53kI GAGCTC 1 cut(s) 68
Eco57I CTGAAG 1 cut(s) 884
EcoICRI GAGCTC 1 cut(s) 68
EcoO109I RGGNCCY 1 cut(s) 914
EcoRII CCWGG 2 cut(s) 93, 1231
EcoT38I GRGCYC 3 cut(s) 70, 604, 1454
FaeI CATG 8 cut(s) 59, 113, 655, 815, 867, 994, 1076, 1225
FaqI GGGAC 1 cut(s) 1087
FatI CATG 8 cut(s) 55, 109, 651, 811, 863, 990, 1072, 1221
FbaI TGATCA 1 cut(s) 376
FblI GTMKAC 1 cut(s) 788
Fnu4HI GCNGC 4 cut(s) 129, 645, 984, 1440
FokI GGATG 7 cut(s) 359, 453, 757, 948, 1151, 1193, 1334
FriOI GRGCYC 3 cut(s) 70, 604, 1454
Fsp4HI GCNGC 4 cut(s) 129, 645, 984, 1440
FspBI CTAG 3 cut(s) 741, 822, 1329
GlaI GCGC 1 cut(s) 635
GluI GCNGC 4 cut(s) 129, 645, 984, 1440
GsuI CTGGAG 1 cut(s) 726
HaeIII GGCC 4 cut(s) 93, 122, 144, 1182
HapII CCGG 1 cut(s) 1210
HhaI GCGC 1 cut(s) 636
Hin1I GRCGYC 1 cut(s) 330
Hin1II CATG 8 cut(s) 59, 113, 655, 815, 867, 994, 1076, 1225
Hin6I GCGC 1 cut(s) 634
HinP1I GCGC 1 cut(s) 634
HindIII AAGCTT 1 cut(s) 1250
HinfI GANTC 8 cut(s) 60, 785, 947, 1218, 1265, 1286, 1325, 1400
HpaII CCGG 1 cut(s) 1210
HphI GGTGA 3 cut(s) 386, 770, 1188
Hpy166II GTNNAC 3 cut(s) 715, 789, 1036
Hpy188III TCNNGA 8 cut(s) 45, 404, 479, 501, 1046, 1210, 1290, 1335
Hpy8I GTNNAC 3 cut(s) 715, 789, 1036
Hpy99I CGWCG 2 cut(s) 243, 1316
HpyAV CCTTC 3 cut(s) 790, 1464, 1485
HpyCH4III ACNGT 2 cut(s) 81, 1150
HpyCH4IV ACGT 4 cut(s) 173, 238, 330, 1277
HpyCH4V TGCA 7 cut(s) 254, 278, 308, 422, 572, 922, 1238
HpyF10VI GCNNNNNNNGC 2 cut(s) 128, 631
HpyF3I CTNAG 7 cut(s) 288, 480, 792, 971, 995, 1167, 1377
HpySE526I ACGT 4 cut(s) 173, 238, 330, 1277
Hsp92I GRCGYC 1 cut(s) 330
Hsp92II CATG 8 cut(s) 59, 113, 655, 815, 867, 994, 1076, 1225
HspAI GCGC 1 cut(s) 634
Kpn2I TCCGGA 1 cut(s) 1209
Ksp22I TGATCA 1 cut(s) 376
Kzo9I GATC 4 cut(s) 6, 41, 376, 1051
LguI GCTCTTC 1 cut(s) 1442
LmnI GCTCC 4 cut(s) 73, 515, 551, 707
Lsp1109I GCAGC 4 cut(s) 115, 631, 970, 1426
LweI GCATC 5 cut(s) 107, 263, 269, 666, 970
MaeI CTAG 3 cut(s) 741, 822, 1329
MaeII ACGT 4 cut(s) 173, 238, 330, 1277
MaeIII GTNAC 3 cut(s) 760, 1084, 1175
MalI GATC 4 cut(s) 8, 43, 378, 1053
MboI GATC 4 cut(s) 6, 41, 376, 1051
MboII GAAGA 9 cut(s) 19, 221, 816, 1061, 1125, 1132, 1393, 1449, 1459
MflI RGATCY 3 cut(s) 6, 41, 1051
MhlI GDGCHC 4 cut(s) 70, 438, 604, 1454
MluCI AATT 6 cut(s) 114, 357, 538, 1269, 1294, 1344
MlyI GAGTC 3 cut(s) 794, 1227, 1280
MmeI TCCRAC 2 cut(s) 317, 494
MroI TCCGGA 1 cut(s) 1209
MroXI GAANNNNTTC 1 cut(s) 1269
MseI TTAA 6 cut(s) 342, 594, 678, 839, 1347, 1526
MslI CAYNNNNRTG 1 cut(s) 315
MspI CCGG 1 cut(s) 1210
MspR9I CCNGG 2 cut(s) 95, 1233
MvaI CCWGG 2 cut(s) 95, 1233
MvnI CGCG 1 cut(s) 636
MwoI GCNNNNNNNGC 2 cut(s) 128, 631
NdeII GATC 4 cut(s) 6, 41, 376, 1051
NlaIII CATG 8 cut(s) 59, 113, 655, 815, 867, 994, 1076, 1225
NlaIV GGNNCC 5 cut(s) 121, 511, 915, 1003, 1103
NmuCI GTSAC 1 cut(s) 760
NspI RCATGY 1 cut(s) 994
PciSI GCTCTTC 1 cut(s) 1442
PcsI WCGNNNNNNNCGW 1 cut(s) 622
PdmI GAANNNNTTC 1 cut(s) 1269
PfeI GAWTC 5 cut(s) 60, 947, 1265, 1325, 1400
PflFI GACNNNGTC 1 cut(s) 191
PkrI GCNGC 4 cut(s) 130, 646, 985, 1441
PleI GAGTC 3 cut(s) 793, 1226, 1280
PpsI GAGTC 3 cut(s) 793, 1226, 1280
PpuMI RGGWCCY 1 cut(s) 914
Psp124BI GAGCTC 1 cut(s) 70
Psp5II RGGWCCY 1 cut(s) 914
Psp6I CCWGG 2 cut(s) 93, 1231
PspGI CCWGG 2 cut(s) 93, 1231
PspN4I GGNNCC 5 cut(s) 121, 511, 915, 1003, 1103
PspPI GGNCC 5 cut(s) 120, 143, 914, 1101, 1181
PspPPI RGGWCCY 1 cut(s) 914
PstNI CAGNNNCTG 3 cut(s) 371, 1403, 1439
PsuI RGATCY 3 cut(s) 6, 41, 1051
PsyI GACNNNGTC 1 cut(s) 191
RsaI GTAC 6 cut(s) 83, 218, 418, 897, 1366, 1518
RsaNI GTAC 6 cut(s) 82, 217, 417, 896, 1365, 1517
RseI CAYNNNNRTG 1 cut(s) 315
SacI GAGCTC 1 cut(s) 70
SapI GCTCTTC 1 cut(s) 1442
SaqAI TTAA 6 cut(s) 342, 594, 678, 839, 1347, 1526
SatI GCNGC 4 cut(s) 129, 645, 984, 1440
Sau3AI GATC 4 cut(s) 6, 41, 376, 1051
Sau96I GGNCC 5 cut(s) 120, 143, 914, 1101, 1181
ScaI AGTACT 1 cut(s) 1366
SchI GAGTC 3 cut(s) 794, 1227, 1280
ScrFI CCNGG 2 cut(s) 95, 1233
SduI GDGCHC 4 cut(s) 70, 438, 604, 1454
SfaNI GCATC 5 cut(s) 107, 263, 269, 666, 970
SinI GGWCC 2 cut(s) 914, 1101
SmiMI CAYNNNNRTG 1 cut(s) 315
SmlI CTYRAG 3 cut(s) 220, 782, 1044
SmoI CTYRAG 3 cut(s) 220, 782, 1044
Sse9I AATT 6 cut(s) 114, 357, 538, 1269, 1294, 1344
SsiI CCGC 1 cut(s) 636
SspI AATATT 2 cut(s) 556, 1062
SspMI CTAG 3 cut(s) 741, 822, 1329
SstI GAGCTC 1 cut(s) 70
StyD4I CCNGG 2 cut(s) 93, 1231
TaaI ACNGT 2 cut(s) 81, 1150
TaiI ACGT 4 cut(s) 176, 241, 333, 1280
TaqI TCGA 2 cut(s) 231, 500
TasI AATT 6 cut(s) 114, 357, 538, 1269, 1294, 1344
TatI WGTACW 3 cut(s) 416, 895, 1364
TfiI GAWTC 5 cut(s) 60, 947, 1265, 1325, 1400
Tru1I TTAA 6 cut(s) 342, 594, 678, 839, 1347, 1526
Tru9I TTAA 6 cut(s) 342, 594, 678, 839, 1347, 1526
TscAI CASTG 3 cut(s) 937, 1003, 1098
TseFI GTSAC 1 cut(s) 760
TseI GCWGC 4 cut(s) 128, 644, 983, 1439
Tsp45I GTSAC 1 cut(s) 760
TspDTI ATGAA 5 cut(s) 126, 1262, 1274, 1278, 1338
TspGWI ACGGA 4 cut(s) 858, 1092, 1293, 1329
TspRI CASTG 3 cut(s) 937, 1003, 1098
Tth111I GACNNNGTC 1 cut(s) 191
VpaK11BI GGWCC 2 cut(s) 914, 1101
XapI RAATTY 1 cut(s) 1294
XceI RCATGY 1 cut(s) 994
XcmI CCANNNNNNNNNTGG 1 cut(s) 1112
XmiI GTMKAC 1 cut(s) 788
XmnI GAANNNNTTC 1 cut(s) 1269
XspI CTAG 3 cut(s) 741, 822, 1329
ZraI GACGTC 1 cut(s) 331
ZrmI AGTACT 1 cut(s) 1366
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.