Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0005798

Physical Location & Seq

Genomic Coordinates Forward (+)

80765284 .. 80769450

Gene Structure 4167 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G052840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGGAGACCTCAAATCCCCGGTCGTTCTTCCAAGGCATCAGATCCAGAGAGCTACACGGATCCCGAGTTCCGAAGCGGTCCTACATCGATTGCCTGGCTTCGGATTTCTCCGAAATTGGAGCCATTGCAGCCGAGCACAACGGACCTCCGATGGCCATTTCGTTCGGCAAGACCAGTAGAAACTCTCACATCGTCGCCATGTCTGATGAGGATGGGTACCTGAGCTTGTTCGATACTCGTCGCAAGTTCTCGGCATCTGCATCTCACCGGGAAAATGCAGATAGAACCAAGGTTTACGACTGGGTTGTGCATCAAAATGCCGTGTTTGACATCTGTTGGATAAAGGATGATACTCAGATTGTGACAGCTTCTGGTGATCAAACTGTCAAGGTATGGGATATTCAGGAAAAGAAATGTACTGCAGTTCTGGTGGGGCACACTGGAAGTGTGAAGTCTTTGAGTCCTCATCCGACTAATCCTGAGATTATCGTCTCCGGTTCAAGAGATGGCTCCTTTGCTCTCTGGGATATGAGATGTAATTCAACATCCAAAAATACGCTTGCGGAGCTCTGCATATGCCCAACTGCTGTGGTTAATGGGGCTCATCTAACCCCACGAGCAAAGCGATCACGGCGTGGAAAGGCTGCTCCAAGGAGCATCACATCAGTTCTTAATCTTAAAGATGAGGTTTCCATTGCTACTGCTGGAGCTGTGGACAGTGTTGTCAAGTTCTGGGACACTAGAAGTTTGAAAAGTATAGTCACACAGACATGTCCTCATATGGAGTCAAATGAGAAGGAAAGAAGATTTCATGGCATAACTAGCTTATCCCAAGATTTAAATGGAGTGTTTGTTTCAGCTTCTTGTATGGACAACAGCATTTATTTGTATAATGTGCTTCAGCTAGAAAAGGGTCCTATGCAATCCTTCTCTGGAGGCCGGATTGAATCTTTTTTTGTAAAGTCGGCTATTAGCCCTGATGCTGCTCACATACTCAGTGGTTCTAGTGATGGAAACGCCTACATTTGGCAGGTAAACAAGCCTCAAGAAGATCCAGTAATATTGAAAAGCCATGACGGAGAAGTTACAGCAGTTGATTGGTCCCATTTTGAGGTTGGGAAGATAGCAACTTCTTCAGATGATTTTACGGTTCGCATCTGGAACTCTGAGAATCGTTACTGCCCAAGCACACCATCACCATCTGCAATTCGAAGAAGAATAATGGCAATCCCAGGTGCAGAATGTAGAAGGCTTCTGATGAATGAATCAATGCATATCTCAAAGGATTCCAGAAATTCCTGTCCCTTGGATGAAGGACTAGATGAAAGTAGCTCACTTCATCCAATTAAAATGCCTAAAATCTGTACTCCTGAATCACAGAAGAAGCAATCCAAGTTAGATTCTGACATGAGTGAAATGTTTGAAAAGACCCCTGAAGCTACATTGAAGAGCCCCTCTTCTGTTCTGAACCCTCCCTCCTCTCTAAAAAGGAAAACTATCCGTGATTACTTTGCAGCACCTACTCTGAACTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000075 GO:0000077 GO:0000151 GO:0000209 GO:0000731 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005813 GO:0005815 GO:0005856 GO:0006139 GO:0006259 GO:0006281 GO:0006301 GO:0006464 GO:0006508 GO:0006511 GO:0006513 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010564 GO:0010948 GO:0015630 GO:0016567 GO:0018130 GO:0019438 GO:0019538 GO:0019941 GO:0019985 GO:0023052 GO:0030163 GO:0031461 GO:0031464 GO:0031465 GO:0031570 GO:0031572 GO:0032446 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0035556 GO:0036211 GO:0042770 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0045786 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0051716 GO:0051726 GO:0065007 GO:0070647 GO:0071704 GO:0071897 GO:0072395 GO:0072401 GO:0072422 GO:0072425 GO:0080008 GO:0090304 GO:1901360 GO:1901362 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1901987 GO:1901988 GO:1902494 GO:1902749 GO:1902750 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

511

Amino Acids

56.5

Weight (kDa)

8.18

Isoelectric Point (pI)

52.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR5	PF25175	51 - 184	1.8e-18	WDR5 beta-propeller domain
Beta-prop_CAF1B_HIR1	PF24105	55 - 185	1.8e-11	CAF1B/HIR1 beta-propeller domain
WD40_CDC20-Fz	PF24807	56 - 192	1.2e-13	CDC20/Fizzy WD40 domain
WDR55	PF24796	92 - 181	1.2e-07	WDR55
Beta-prop_WDR3_1st	PF25173	97 - 177	2.5e-14	WDR3 first beta-propeller domain
WD40_Prp19	PF24814	99 - 182	1.2e-14	Prp19 WD40 domain
WD40	PF00400	100 - 133	7.2e-06	WD domain, G-beta repeat
Beta-prop_TEP1_2nd	PF25047	102 - 179	2.8e-08	TEP-1 second beta-propeller
Beta-prop_WDR3_2nd	PF25172	103 - 176	1.1e-07	WDR3 second beta-propeller domain
Beta-prop_THOC3	PF25174	104 - 182	4e-16	THOC3 beta-propeller domain
WD40_Gbeta	PF25391	105 - 186	3.8e-14	G protein beta WD-40 repeat protein
WD40_WDHD1_1st	PF24817	106 - 185	1.6e-11	WDHD1 first WD40 domain
Beta-prop_TEP1_C	PF25048	117 - 170	3.4e-06	TEP-1 C-terminal beta-propeller
Beta-prop_SCAP	PF24017	119 - 181	9.6e-06	SCAP Beta-propeller
WD40	PF00400	138 - 176	1.1e-06	WD domain, G-beta repeat
Beta-prop_WDR3_2nd	PF25172	215 - 391	1.5e-06	WDR3 second beta-propeller domain
WD40_CDC20-Fz	PF24807	218 - 393	4.8e-11	CDC20/Fizzy WD40 domain
Beta-prop_WDR5	PF25175	220 - 388	1e-12	WDR5 beta-propeller domain
Beta-prop_EML_2	PF23414	231 - 391	4.3e-07	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR3_1st	PF25173	233 - 397	1.5e-13	WDR3 first beta-propeller domain
Beta-prop_CAF1B_HIR1	PF24105	323 - 394	1.8e-06	CAF1B/HIR1 beta-propeller domain
Beta-prop_THOC3	PF25174	323 - 397	5.2e-10	THOC3 beta-propeller domain
WD40_Prp19	PF24814	327 - 394	8.2e-06	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0005798)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27640 AT3G27640
fragaria_vesca	FvH4_6g51280 FvH4_6g51280 FvH4_6g51280 FvH4_6g51280
malus_domestica	MD09G1027800.v1.1 MD17G1027700.v1.1 MD17G1028200.v1.1
prunus_persica	Prupe.3G290400_v2.0.a1 Prupe.3G291000_v2.0.a1
pyrus_communis	pycom111g02180
rosa_chinensis	RchiOBHm_Chr2g0172901
rosa_laevigata	RLG00000022140
rosa_multiflora	Rmu_co8216202.1_g000001 Rmu_sc0002979.1_g000002 Rmu_sc0013380.1_g000001 Rmu_sc0015618.1_g000001
rosa_roxburghii	Rroxscaffold_2G00079450
rosa_rugosa	Rorug02G0563200 Rorug02G0563400
rosa_samantha	Rh2AG640100 Rh2AG640200 Rh2BG653600 Rh2BG653700 Rh2CG619200 Rh2DG667200
rosa_wichuraiana	Rw2G052840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	722
Acc36I	ACCTGC	1 cut(s)	1021
Acc65I	GGTACC	1 cut(s)	216
AccB1I	GGYRCC	1 cut(s)	216
AciI	CCGC	2 cut(s)	76, 563
AclWI	GGATC	4 cut(s)	36, 54, 67, 1046
AcoI	YGGCCR	1 cut(s)	153
AcsI	RAATTY	1 cut(s)	1294
AcuI	CTGAAG	3 cut(s)	884, 1119, 1455
AdeI	CACNNNGTG	1 cut(s)	635
AfaI	GTAC	3 cut(s)	218, 418, 1366
AfiI	CCNNNNNNNGG	3 cut(s)	100, 1026, 1111
AflIII	ACRYGT	1 cut(s)	770
AgsI	TTSAA	7 cut(s)	501, 543, 751, 947, 1066, 1424, 1447
AjnI	CCWGG	2 cut(s)	93, 1231
AloI	GAACNNNNNNTCC	4 cut(s)	51, 83, 1460, 1492
Alw21I	GWGCWC	2 cut(s)	138, 570
Alw26I	GTCTC	1 cut(s)	496
AlwI	GGATC	4 cut(s)	36, 54, 67, 1046
AlwNI	CAGNNNCTG	1 cut(s)	371
Ama87I	CYCGRG	1 cut(s)	63
AoxI	GGCC	2 cut(s)	153, 937
ApeKI	GCWGC	4 cut(s)	128, 644, 983, 1514
ApoI	RAATTY	1 cut(s)	1294
ArsI	GACNNNNNNTTYG	1 cut(s)	37
Asp718I	GGTACC	1 cut(s)	216
AspS9I	GGNCC	4 cut(s)	78, 143, 914, 1101
AsuC2I	CCSGG	2 cut(s)	19, 269
AsuHPI	GGTGA	3 cut(s)	257, 386, 1188
AsuII	TTCGAA	1 cut(s)	1210
AvaI	CYCGRG	1 cut(s)	63
AvaII	GGWCC	4 cut(s)	78, 143, 914, 1101
BaeGI	GKGCMC	1 cut(s)	438
BalI	TGGCCA	1 cut(s)	155
BamHI	GGATCC	1 cut(s)	59
BanI	GGYRCC	1 cut(s)	216
BanII	GRGCYC	3 cut(s)	570, 604, 1454
BarI	GAAGNNNNNNTAC	2 cut(s)	65, 97
BauI	CACGAG	1 cut(s)	615
Bbv12I	GWGCWC	2 cut(s)	138, 570
BbvI	GCAGC	4 cut(s)	140, 631, 970, 1526
BccI	CCATC	6 cut(s)	145, 206, 500, 1004, 1201, 1207
BceAI	ACGGC	2 cut(s)	305, 647
BciT130I	CCWGG	2 cut(s)	95, 1233
BclI	TGATCA	1 cut(s)	376
BcnI	CCSGG	2 cut(s)	19, 269
BcoDI	GTCTC	1 cut(s)	496
BfaI	CTAG	5 cut(s)	741, 822, 905, 1005, 1319
BfmI	CTRYAG	1 cut(s)	420
BfuAI	ACCTGC	1 cut(s)	1021
BisI	GCNGC	4 cut(s)	129, 645, 984, 1515
BlsI	GCNGC	4 cut(s)	130, 646, 985, 1516
Bme1390I	CCNGG	4 cut(s)	19, 95, 269, 1233
Bme18I	GGWCC	4 cut(s)	78, 143, 914, 1101
BmeT110I	CYCGRG	1 cut(s)	63
BmgT120I	GGNCC	4 cut(s)	78, 143, 914, 1101
BmiI	GGNNCC	6 cut(s)	61, 121, 218, 511, 915, 1103
BmrFI	CCNGG	4 cut(s)	19, 95, 269, 1233
BmrI	ACTGGG	1 cut(s)	310
BmsI	GCATC	7 cut(s)	45, 263, 269, 319, 666, 970, 1164
BmuI	ACTGGG	1 cut(s)	310
BpmI	CTGGAG	2 cut(s)	726, 954
Bpu10I	CCTNAGC	1 cut(s)	221
Bpu14I	TTCGAA	1 cut(s)	1210
BpuEI	CTTGAG	1 cut(s)	1029
BpuMI	CCSGG	2 cut(s)	19, 269
Bsa29I	ATCGAT	1 cut(s)	87
BsaJI	CCNNGG	6 cut(s)	17, 31, 288, 650, 1231, 1305
BsaWI	WCCGGW	1 cut(s)	494
BsaXI	ACNNNNNCTCC	4 cut(s)	837, 867, 1460, 1490
Bsc4I	CCNNNNNNNGG	3 cut(s)	100, 1026, 1111
Bse1I	ACTGG	4 cut(s)	174, 305, 445, 1055
Bse3DI	GCAATG	2 cut(s)	123, 693
BseBI	CCWGG	2 cut(s)	95, 1233
BseCI	ATCGAT	1 cut(s)	87
BseDI	CCNNGG	6 cut(s)	17, 31, 288, 650, 1231, 1305
BseGI	GGATG	6 cut(s)	217, 352, 466, 545, 1315, 1339
BseLI	CCNNNNNNNGG	3 cut(s)	100, 1026, 1111
BseMI	GCAATG	2 cut(s)	123, 693
BseMII	CTCAG	5 cut(s)	212, 368, 471, 1009, 1158
BseNI	ACTGG	4 cut(s)	174, 305, 445, 1055
BseRI	GAGGAG	1 cut(s)	1468
BseSI	GKGCMC	1 cut(s)	438
BseXI	GCAGC	4 cut(s)	140, 631, 970, 1526
BsgI	GTGCAG	1 cut(s)	1257
Bsh1285I	CGRYCG	1 cut(s)	23
BshFI	GGCC	2 cut(s)	155, 939
BshNI	GGYRCC	1 cut(s)	216
BshVI	ATCGAT	1 cut(s)	87
BsiEI	CGRYCG	1 cut(s)	23
BsiHKAI	GWGCWC	2 cut(s)	138, 570
BsiHKCI	CYCGRG	1 cut(s)	63
BsiSI	CCGG	4 cut(s)	19, 268, 495, 940
BslFI	GGGAC	3 cut(s)	749, 1087, 1287
BslI	CCNNNNNNNGG	3 cut(s)	100, 1026, 1111
BsmAI	GTCTC	1 cut(s)	496
BsmBI	CGTCTC	1 cut(s)	496
BsmFI	GGGAC	3 cut(s)	749, 1087, 1287
BsnI	GGCC	2 cut(s)	155, 939
BsoBI	CYCGRG	1 cut(s)	63
Bsp119I	TTCGAA	1 cut(s)	1210
Bsp1286I	GDGCHC	5 cut(s)	138, 438, 570, 604, 1454
Bsp143I	GATC	5 cut(s)	41, 59, 376, 626, 1051
BspACI	CCGC	2 cut(s)	76, 563
BspANI	GGCC	2 cut(s)	155, 939
BspCNI	CTCAG	5 cut(s)	213, 367, 472, 1008, 1159
BspDI	ATCGAT	1 cut(s)	87
BspLI	GGNNCC	6 cut(s)	61, 121, 218, 511, 915, 1103
BspMAI	CTGCAG	1 cut(s)	424
BspMI	ACCTGC	1 cut(s)	1021
BspPI	GGATC	4 cut(s)	36, 54, 67, 1046
BspQI	GCTCTTC	1 cut(s)	1442
BspT104I	TTCGAA	1 cut(s)	1210
BspT107I	GGYRCC	1 cut(s)	216
BsrDI	GCAATG	2 cut(s)	123, 693
BsrI	ACTGG	4 cut(s)	174, 305, 445, 1055
BssECI	CCNNGG	6 cut(s)	17, 31, 288, 650, 1231, 1305
BssMI	GATC	5 cut(s)	41, 59, 376, 626, 1051
BssSI	CACGAG	1 cut(s)	615
BssT1I	CCWWGG	4 cut(s)	31, 288, 650, 1305
Bst2BI	CACGAG	1 cut(s)	615
Bst2UI	CCWGG	2 cut(s)	95, 1233
Bst4CI	ACNGT	3 cut(s)	385, 719, 1150
Bst6I	CTCTTC	2 cut(s)	1442, 1462
BstBI	TTCGAA	1 cut(s)	1210
BstC8I	GCNNGC	1 cut(s)	561
BstDEI	CTNAG	5 cut(s)	221, 354, 480, 995, 1167
BstF5I	GGATG	6 cut(s)	217, 352, 466, 545, 1315, 1339
BstKTI	GATC	5 cut(s)	44, 62, 379, 629, 1054
BstMAI	GTCTC	1 cut(s)	496
BstMBI	GATC	5 cut(s)	41, 59, 376, 626, 1051
BstMCI	CGRYCG	1 cut(s)	23
BstMWI	GCNNNNNNNGC	4 cut(s)	128, 565, 631, 822
BstNI	CCWGG	2 cut(s)	95, 1233
BstNSI	RCATGY	1 cut(s)	774
BstSCI	CCNGG	4 cut(s)	17, 93, 267, 1231
BstSFI	CTRYAG	1 cut(s)	420
BstSLI	GKGCMC	1 cut(s)	438
BstV1I	GCAGC	4 cut(s)	140, 631, 970, 1526
BstX2I	RGATCY	3 cut(s)	41, 59, 1051
BstYI	RGATCY	3 cut(s)	41, 59, 1051
Bsu15I	ATCGAT	1 cut(s)	87
BsuRI	GGCC	2 cut(s)	155, 939
BsuTUI	ATCGAT	1 cut(s)	87
BtsCI	GGATG	6 cut(s)	217, 352, 466, 545, 1315, 1339
BtsIMutI	CAGTG	3 cut(s)	438, 724, 1003
BveI	ACCTGC	1 cut(s)	1021
Cac8I	GCNNGC	1 cut(s)	561
CaiI	CAGNNNCTG	1 cut(s)	371
Cfr13I	GGNCC	4 cut(s)	78, 143, 914, 1101
ClaI	ATCGAT	1 cut(s)	87
Csp6I	GTAC	3 cut(s)	217, 417, 1365
CspCI	CAANNNNNGTGG	2 cut(s)	570, 605
CviAII	CATG	5 cut(s)	199, 771, 812, 1073, 1408
CviQI	GTAC	3 cut(s)	217, 417, 1365
DdeI	CTNAG	5 cut(s)	221, 354, 480, 995, 1167
DpnI	GATC	5 cut(s)	43, 61, 378, 628, 1053
DpnII	GATC	5 cut(s)	41, 59, 376, 626, 1051
DraI	TTTAAA	1 cut(s)	840
DraIII	CACNNNGTG	1 cut(s)	635
DrdI	GACNNNNNNGTC	1 cut(s)	722
DseDI	GACNNNNNNGTC	1 cut(s)	722
EaeI	YGGCCR	1 cut(s)	153
Eam1104I	CTCTTC	2 cut(s)	1442, 1462
EarI	CTCTTC	2 cut(s)	1442, 1462
Ecl136II	GAGCTC	1 cut(s)	568
Eco130I	CCWWGG	4 cut(s)	31, 288, 650, 1305
Eco24I	GRGCYC	3 cut(s)	570, 604, 1454
Eco47I	GGWCC	4 cut(s)	78, 143, 914, 1101
Eco53kI	GAGCTC	1 cut(s)	568
Eco57I	CTGAAG	3 cut(s)	884, 1119, 1455
Eco88I	CYCGRG	1 cut(s)	63
EcoICRI	GAGCTC	1 cut(s)	568
EcoO109I	RGGNCCY	1 cut(s)	914
EcoRII	CCWGG	2 cut(s)	93, 1231
EcoT14I	CCWWGG	4 cut(s)	31, 288, 650, 1305
EcoT22I	ATGCAT	1 cut(s)	1275
EcoT38I	GRGCYC	3 cut(s)	570, 604, 1454
ErhI	CCWWGG	4 cut(s)	31, 288, 650, 1305
Esp3I	CGTCTC	1 cut(s)	496
FaeI	CATG	5 cut(s)	202, 774, 815, 1076, 1411
FaqI	GGGAC	3 cut(s)	749, 1087, 1287
FatI	CATG	5 cut(s)	198, 770, 811, 1072, 1407
FauNDI	CATATG	2 cut(s)	575, 780
FbaI	TGATCA	1 cut(s)	376
Fnu4HI	GCNGC	4 cut(s)	129, 645, 984, 1515
FokI	GGATG	6 cut(s)	224, 359, 453, 532, 1322, 1326
FriOI	GRGCYC	3 cut(s)	570, 604, 1454
Fsp4HI	GCNGC	4 cut(s)	129, 645, 984, 1515
FspBI	CTAG	5 cut(s)	741, 822, 905, 1005, 1319
GluI	GCNGC	4 cut(s)	129, 645, 984, 1515
GsuI	CTGGAG	2 cut(s)	726, 954
HaeIII	GGCC	2 cut(s)	155, 939
HapII	CCGG	4 cut(s)	19, 268, 495, 940
Hin1II	CATG	5 cut(s)	202, 774, 815, 1076, 1411
HinfI	GANTC	8 cut(s)	460, 785, 947, 1171, 1265, 1286, 1373, 1400
HpaII	CCGG	4 cut(s)	19, 268, 495, 940
HphI	GGTGA	3 cut(s)	257, 386, 1188
Hpy166II	GTNNAC	3 cut(s)	295, 715, 1036
Hpy8I	GTNNAC	3 cut(s)	295, 715, 1036
Hpy99I	CGWCG	2 cut(s)	197, 243
HpyAV	CCTTC	4 cut(s)	790, 937, 1242, 1307
HpyCH4III	ACNGT	3 cut(s)	385, 719, 1150
HpyF10VI	GCNNNNNNNGC	4 cut(s)	128, 565, 631, 822
HpyF3I	CTNAG	5 cut(s)	221, 354, 480, 995, 1167
Hsp92II	CATG	5 cut(s)	202, 774, 815, 1076, 1411
KpnI	GGTACC	1 cut(s)	220
Ksp22I	TGATCA	1 cut(s)	376
Kzo9I	GATC	5 cut(s)	41, 59, 376, 626, 1051
LguI	GCTCTTC	1 cut(s)	1442
LmnI	GCTCC	6 cut(s)	119, 515, 565, 652, 654, 707
Lsp1109I	GCAGC	4 cut(s)	140, 631, 970, 1526
LweI	GCATC	7 cut(s)	45, 263, 269, 319, 666, 970, 1164
MaeI	CTAG	5 cut(s)	741, 822, 905, 1005, 1319
MaeIII	GTNAC	4 cut(s)	361, 760, 1084, 1175
MalI	GATC	5 cut(s)	43, 61, 378, 628, 1053
MboI	GATC	5 cut(s)	41, 59, 376, 626, 1051
MflI	RGATCY	3 cut(s)	41, 59, 1051
MhlI	GDGCHC	5 cut(s)	138, 438, 570, 604, 1454
MlsI	TGGCCA	1 cut(s)	155
MluCI	AATT	5 cut(s)	114, 538, 1206, 1294, 1344
MluNI	TGGCCA	1 cut(s)	155
MlyI	GAGTC	2 cut(s)	469, 794
MmeI	TCCRAC	2 cut(s)	317, 494
Mox20I	TGGCCA	1 cut(s)	155
Mph1103I	ATGCAT	1 cut(s)	1275
MscI	TGGCCA	1 cut(s)	155
MseI	TTAA	5 cut(s)	594, 672, 678, 839, 1347
MslI	CAYNNNNRTG	2 cut(s)	315, 769
Msp20I	TGGCCA	1 cut(s)	155
MspI	CCGG	4 cut(s)	19, 268, 495, 940
MspR9I	CCNGG	4 cut(s)	19, 95, 269, 1233
MvaI	CCWGG	2 cut(s)	95, 1233
MwoI	GCNNNNNNNGC	4 cut(s)	128, 565, 631, 822
NciI	CCSGG	2 cut(s)	19, 269
NdeI	CATATG	2 cut(s)	575, 780
NdeII	GATC	5 cut(s)	41, 59, 376, 626, 1051
NlaIII	CATG	5 cut(s)	202, 774, 815, 1076, 1411
NlaIV	GGNNCC	6 cut(s)	61, 121, 218, 511, 915, 1103
NmeAIII	GCCGAG	2 cut(s)	157, 230
NmuCI	GTSAC	2 cut(s)	361, 760
NsiI	ATGCAT	1 cut(s)	1275
NspI	RCATGY	1 cut(s)	774
NspV	TTCGAA	1 cut(s)	1210
PciI	ACATGT	1 cut(s)	770
PciSI	GCTCTTC	1 cut(s)	1442
PcsI	WCGNNNNNNNCGW	1 cut(s)	622
PfeI	GAWTC	6 cut(s)	947, 1171, 1265, 1286, 1373, 1400
PkrI	GCNGC	4 cut(s)	130, 646, 985, 1516
PleI	GAGTC	2 cut(s)	468, 793
PpsI	GAGTC	2 cut(s)	468, 793
PpuMI	RGGWCCY	1 cut(s)	914
PscI	ACATGT	1 cut(s)	770
Psp124BI	GAGCTC	1 cut(s)	570
Psp5II	RGGWCCY	1 cut(s)	914
Psp6I	CCWGG	2 cut(s)	93, 1231
PspGI	CCWGG	2 cut(s)	93, 1231
PspN4I	GGNNCC	6 cut(s)	61, 121, 218, 511, 915, 1103
PspPI	GGNCC	4 cut(s)	78, 143, 914, 1101
PspPPI	RGGWCCY	1 cut(s)	914
PstI	CTGCAG	1 cut(s)	424
PstNI	CAGNNNCTG	1 cut(s)	371
PsuI	RGATCY	3 cut(s)	41, 59, 1051
RsaI	GTAC	3 cut(s)	218, 418, 1366
RsaNI	GTAC	3 cut(s)	217, 417, 1365
RseI	CAYNNNNRTG	2 cut(s)	315, 769
SacI	GAGCTC	1 cut(s)	570
SapI	GCTCTTC	1 cut(s)	1442
SaqAI	TTAA	5 cut(s)	594, 672, 678, 839, 1347
SatI	GCNGC	4 cut(s)	129, 645, 984, 1515
Sau3AI	GATC	5 cut(s)	41, 59, 376, 626, 1051
Sau96I	GGNCC	4 cut(s)	78, 143, 914, 1101
SchI	GAGTC	2 cut(s)	469, 794
ScrFI	CCNGG	4 cut(s)	19, 95, 269, 1233
SduI	GDGCHC	5 cut(s)	138, 438, 570, 604, 1454
SfaNI	GCATC	7 cut(s)	45, 263, 269, 319, 666, 970, 1164
SfcI	CTRYAG	1 cut(s)	420
SfuI	TTCGAA	1 cut(s)	1210
SinI	GGWCC	4 cut(s)	78, 143, 914, 1101
SmiI	ATTTAAAT	1 cut(s)	840
SmiMI	CAYNNNNRTG	2 cut(s)	315, 769
SmlI	CTYRAG	1 cut(s)	1044
SmoI	CTYRAG	1 cut(s)	1044
Sse9I	AATT	5 cut(s)	114, 538, 1206, 1294, 1344
SsiI	CCGC	2 cut(s)	76, 563
SspI	AATATT	1 cut(s)	1062
SspMI	CTAG	5 cut(s)	741, 822, 905, 1005, 1319
SstI	GAGCTC	1 cut(s)	570
StyD4I	CCNGG	4 cut(s)	17, 93, 267, 1231
StyI	CCWWGG	4 cut(s)	31, 288, 650, 1305
SwaI	ATTTAAAT	1 cut(s)	840
TaaI	ACNGT	3 cut(s)	385, 719, 1150
TaqI	TCGA	3 cut(s)	87, 231, 1210
TasI	AATT	5 cut(s)	114, 538, 1206, 1294, 1344
TatI	WGTACW	2 cut(s)	416, 1364
TfiI	GAWTC	6 cut(s)	947, 1171, 1265, 1286, 1373, 1400
Tru1I	TTAA	5 cut(s)	594, 672, 678, 839, 1347
Tru9I	TTAA	5 cut(s)	594, 672, 678, 839, 1347
TscAI	CASTG	3 cut(s)	445, 724, 1003
TseFI	GTSAC	2 cut(s)	361, 760
TseI	GCWGC	4 cut(s)	128, 644, 983, 1514
Tsp45I	GTSAC	2 cut(s)	361, 760
TspDTI	ATGAA	6 cut(s)	800, 1274, 1278, 1326, 1328, 1338
TspGWI	ACGGA	4 cut(s)	72, 156, 1092, 1490
TspRI	CASTG	3 cut(s)	445, 724, 1003
VpaK11BI	GGWCC	4 cut(s)	78, 143, 914, 1101
XapI	RAATTY	1 cut(s)	1294
XceI	RCATGY	1 cut(s)	774
XcmI	CCANNNNNNNNNTGG	2 cut(s)	839, 1112
XspI	CTAG	5 cut(s)	741, 822, 905, 1005, 1319
Zsp2I	ATGCAT	1 cut(s)	1275

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.