Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0005798

Physical Location & Seq

Genomic Coordinates Forward (+)

38029567 .. 38033588

Gene Structure 4022 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g51280.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1533 bp

ATGGAGACGACTTCAAAGCCCCGGTCCTTCTTCCAAGGCGTCAGATCCAGAGAGCTACACGGATCCCGAGCTCCGAAGCGGTCCTACGTGGATTGCCTGGCTTCGGAATTCTCCGAGGCCGGAGCTATTGCCGCCGAGCACAACGGACCTCCGATGGCCATTTCGTTCGGCAAGACCAGTAGAAACTCTCACATTGTGGCCATGTCTGATGAGGATGGCTACTTGAGCTTGTTCGACACGCGGCGCAGGTTCTCGGCGTCTGCATCTCACCAGGAAAATGCAGATAGAACCAAGGTTTGTGATTGGGTTGCGCATCAGAATGCGGTATTTGACATCTGTTGGATAAAGGATGATACTCAAATTGTGACAGCTTCTGGTGATCAAACTGTAAAAGTATGGGATATTCAGGAGAAGAAATGTACTGCAGTTCTAATGGGGCACACTGGAAGTGTGAAATCTTTGAGCCCTCATCCAACTAATCCTGATATTATTGTCTCTGGTTCAAGAGATGGCTCCTTTGCTCTCTGGGATATGAGATGCAATTCAACCTCCAAAAATACGCTTGCAGAGCTATGTATATGCCCTACTGCTGTGATCAAAGGGGCTCATCTTACCCCCTGGGCAAAGCGTTCAAGGCGTGGAAGGGCTGCTCCAAGGAGCATCACATCAGTTCTTAATCTTAAAGATGAGGTTTCCATTGCTACCGCTGGAGCTGTGGACAGTGTCGTCAAGTTCTGGGACACTAGAAGTCTGAAAACTGTAGTCACACAGACATGTCCTCAGATGGAGTCAAATGAGAAGGAGAGAAGATTTCATGGCATAACTAGCTTATCCCAAGATTTAAATGGAGTGTTTGTTTCAGCCTCTTGTATGGACAACAGCATTTATCTGTACAATGTGCTTCAGCTAGAAAAGGGTCCTATGCAATCCTTCTCTGGAGGTCGGATTGAATCCTTTTTTGTGAAGTCGGCTATCAGCCCTGATGCTGCTTACATACTCAGTGGTTCTAGTGATGGAAATGCCTACATTTGGCAGGTAAACAAGCCTCAAGAAGATCCAGTAATATTGAAAAGCCATGATGGAGAAGTTACAGCAGTTGACTGGTCCCATTTTGAGGTTGGGAAGATAGCAACTTCTTCAGATGATTTTACGGTTCGCATCTGGAACTCTGAGAATCGTTACTGCCCTAGCACCCCATCATCATCTGCAATTAGAAGAAGAATTATGGCTTTCCCTGGTGTAGAATGTAGAAGGCTGATGAACGAATCAATGGATATGTCAAAGGATGGAAAGTCCTGTCGCTCGGATGAAGGAGTAGATGAAATTAACTCACTTAATCCAATTAAAATGCCTAGAATCTGTACTCCTGATTCACAGAAGAAGCAATGCATGTTAGATTCCGACATGAGTGAAACATTTGAAAAGACCCCTGAAGCTACAATGAAGAGCCCCTCTTCTGTTCTGAACCCTCCCTCTTCTCTAAAAAGGAAAACTATCCGCGATTACTTTGTAGTACCTACTCTGAACTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000075 GO:0000077 GO:0000151 GO:0000209 GO:0000731 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005813 GO:0005815 GO:0005856 GO:0006139 GO:0006259 GO:0006281 GO:0006301 GO:0006464 GO:0006508 GO:0006511 GO:0006513 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010564 GO:0010948 GO:0015630 GO:0016567 GO:0018130 GO:0019438 GO:0019538 GO:0019941 GO:0019985 GO:0023052 GO:0030163 GO:0031461 GO:0031464 GO:0031465 GO:0031570 GO:0031572 GO:0032446 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0035556 GO:0036211 GO:0042770 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0045786 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0051716 GO:0051726 GO:0065007 GO:0070647 GO:0071704 GO:0071897 GO:0072395 GO:0072401 GO:0072422 GO:0072425 GO:0080008 GO:0090304 GO:1901360 GO:1901362 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1901987 GO:1901988 GO:1902494 GO:1902749 GO:1902750 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

511

Amino Acids

56.45

Weight (kDa)

7.88

Isoelectric Point (pI)

50.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_THOC3	PF25174	2 - 40	3.7e-06	THOC3 beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	73 - 248	2.4e-07	WDR3 second beta-propeller domain
WD40_CDC20-Fz	PF24807	75 - 251	1.1e-11	CDC20/Fizzy WD40 domain
Beta-prop_WDR5	PF25175	77 - 245	1.6e-13	WDR5 beta-propeller domain
WD40_WDHD1_1st	PF24817	88 - 225	9.6e-07	WDHD1 first WD40 domain
Beta-prop_EML_2	PF23414	88 - 248	4.1e-08	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR3_1st	PF25173	90 - 254	5.3e-14	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	180 - 255	1.6e-10	THOC3 beta-propeller domain
Beta-prop_CAF1B_HIR1	PF24105	180 - 252	1.3e-06	CAF1B/HIR1 beta-propeller domain
WD40_Prp19	PF24814	184 - 254	1.9e-06	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005798)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27640 AT3G27640
fragaria_vesca	FvH4_6g51280 FvH4_6g51280 FvH4_6g51280 FvH4_6g51280
malus_domestica	MD09G1027800.v1.1 MD17G1027700.v1.1 MD17G1028200.v1.1
prunus_persica	Prupe.3G290400_v2.0.a1 Prupe.3G291000_v2.0.a1
pyrus_communis	pycom111g02180
rosa_chinensis	RchiOBHm_Chr2g0172901
rosa_laevigata	RLG00000022140
rosa_multiflora	Rmu_co8216202.1_g000001 Rmu_sc0002979.1_g000002 Rmu_sc0013380.1_g000001 Rmu_sc0015618.1_g000001
rosa_roxburghii	Rroxscaffold_2G00079450
rosa_rugosa	Rorug02G0563200 Rorug02G0563400
rosa_samantha	Rh2AG640100 Rh2AG640200 Rh2BG653600 Rh2BG653700 Rh2CG619200 Rh2DG667200
rosa_wichuraiana	Rw2G052840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	725
Acc16I	TGCGCA	1 cut(s)	312
Acc36I	ACCTGC	2 cut(s)	237, 1024
AccII	CGCG	2 cut(s)	241, 1500
AciI	CCGC	6 cut(s)	79, 132, 241, 323, 705, 1498
AclWI	GGATC	4 cut(s)	39, 57, 70, 1049
AcoI	YGGCCR	2 cut(s)	156, 198
AcsI	RAATTY	1 cut(s)	107
AcuI	CTGAAG	3 cut(s)	887, 1122, 1452
AcyI	GRCGYC	2 cut(s)	39, 257
AdeI	CACNNNGTG	1 cut(s)	196
AfaI	GTAC	4 cut(s)	421, 893, 1363, 1515
AfiI	CCNNNNNNNGG	3 cut(s)	103, 1029, 1114
AflIII	ACRYGT	1 cut(s)	773
AgsI	TTSAA	7 cut(s)	15, 504, 546, 633, 950, 1069, 1421
AjnI	CCWGG	4 cut(s)	96, 270, 617, 1234
Alw21I	GWGCWC	2 cut(s)	73, 141
Alw26I	GTCTC	1 cut(s)	499
AlwI	GGATC	4 cut(s)	39, 57, 70, 1049
AlwNI	CAGNNNCTG	1 cut(s)	374
Ama87I	CYCGRG	1 cut(s)	66
AoxI	GGCC	3 cut(s)	117, 156, 198
ApeKI	GCWGC	2 cut(s)	647, 986
ApoI	RAATTY	1 cut(s)	107
ArsI	GACNNNNNNTTYG	2 cut(s)	8, 40
AspLEI	GCGC	2 cut(s)	246, 313
AspS9I	GGNCC	5 cut(s)	24, 81, 146, 917, 1104
AsuC2I	CCSGG	1 cut(s)	22
AsuHPI	GGTGA	2 cut(s)	260, 389
AvaI	CYCGRG	1 cut(s)	66
AvaII	GGWCC	5 cut(s)	24, 81, 146, 917, 1104
BaeGI	GKGCMC	1 cut(s)	441
BalI	TGGCCA	2 cut(s)	158, 200
BamHI	GGATCC	1 cut(s)	62
BanII	GRGCYC	4 cut(s)	73, 467, 607, 1451
BarI	GAAGNNNNNNTAC	2 cut(s)	68, 100
Bbv12I	GWGCWC	2 cut(s)	73, 141
BbvI	GCAGC	2 cut(s)	634, 973
BccI	CCATC	8 cut(s)	148, 209, 503, 778, 1007, 1073, 1204, 1280
BciT130I	CCWGG	4 cut(s)	98, 272, 619, 1236
BclI	TGATCA	2 cut(s)	379, 594
BcnI	CCSGG	1 cut(s)	22
BcoDI	GTCTC	1 cut(s)	499
BfaI	CTAG	6 cut(s)	744, 825, 908, 1008, 1188, 1353
BfmI	CTRYAG	2 cut(s)	423, 759
BfuAI	ACCTGC	2 cut(s)	237, 1024
BisI	GCNGC	4 cut(s)	132, 242, 648, 987
BlsI	GCNGC	4 cut(s)	133, 243, 649, 988
Bme1390I	CCNGG	5 cut(s)	22, 98, 272, 619, 1236
Bme18I	GGWCC	5 cut(s)	24, 81, 146, 917, 1104
BmeT110I	CYCGRG	1 cut(s)	66
BmgT120I	GGNCC	5 cut(s)	24, 81, 146, 917, 1104
BmiI	GGNNCC	4 cut(s)	64, 514, 918, 1106
BmrFI	CCNGG	5 cut(s)	22, 98, 272, 619, 1236
BmsI	GCATC	6 cut(s)	272, 322, 527, 669, 973, 1167
BpmI	CTGGAG	2 cut(s)	729, 957
BpuEI	CTTGAG	2 cut(s)	244, 1032
BpuMI	CCSGG	1 cut(s)	22
BsaAI	YACGTR	1 cut(s)	88
BsaHI	GRCGYC	2 cut(s)	39, 257
BsaJI	CCNNGG	8 cut(s)	20, 34, 114, 291, 617, 618, 653, 1234
BsaXI	ACNNNNNCTCC	2 cut(s)	840, 870
Bsc4I	CCNNNNNNNGG	3 cut(s)	103, 1029, 1114
Bse1I	ACTGG	4 cut(s)	177, 448, 1058, 1106
Bse3DI	GCAATG	2 cut(s)	696, 1391
BseBI	CCWGG	4 cut(s)	98, 272, 619, 1236
BseDI	CCNNGG	8 cut(s)	20, 34, 114, 291, 617, 618, 653, 1234
BseGI	GGATG	5 cut(s)	220, 355, 469, 1291, 1312
BseLI	CCNNNNNNNGG	3 cut(s)	103, 1029, 1114
BseMI	GCAATG	2 cut(s)	696, 1391
BseMII	CTCAG	3 cut(s)	794, 1012, 1161
BseNI	ACTGG	4 cut(s)	177, 448, 1058, 1106
BseSI	GKGCMC	1 cut(s)	441
BseXI	GCAGC	2 cut(s)	634, 973
Bsh1236I	CGCG	2 cut(s)	241, 1500
BshFI	GGCC	3 cut(s)	119, 158, 200
BsiHKAI	GWGCWC	2 cut(s)	73, 141
BsiHKCI	CYCGRG	1 cut(s)	66
BsiSI	CCGG	2 cut(s)	22, 120
BslFI	GGGAC	2 cut(s)	752, 1090
BslI	CCNNNNNNNGG	3 cut(s)	103, 1029, 1114
BsmAI	GTCTC	1 cut(s)	499
BsmFI	GGGAC	2 cut(s)	752, 1090
BsmI	GAATGC	1 cut(s)	325
BsnI	GGCC	3 cut(s)	119, 158, 200
BsoBI	CYCGRG	1 cut(s)	66
Bsp1286I	GDGCHC	6 cut(s)	73, 141, 441, 467, 607, 1451
Bsp1407I	TGTACA	1 cut(s)	891
Bsp143I	GATC	5 cut(s)	44, 62, 379, 594, 1054
BspACI	CCGC	6 cut(s)	79, 132, 241, 323, 705, 1498
BspANI	GGCC	3 cut(s)	119, 158, 200
BspCNI	CTCAG	3 cut(s)	793, 1011, 1162
BspFNI	CGCG	2 cut(s)	241, 1500
BspLI	GGNNCC	4 cut(s)	64, 514, 918, 1106
BspMAI	CTGCAG	1 cut(s)	427
BspMI	ACCTGC	2 cut(s)	237, 1024
BspPI	GGATC	4 cut(s)	39, 57, 70, 1049
BspQI	GCTCTTC	1 cut(s)	1439
BsrDI	GCAATG	2 cut(s)	696, 1391
BsrGI	TGTACA	1 cut(s)	891
BsrI	ACTGG	4 cut(s)	177, 448, 1058, 1106
BssECI	CCNNGG	8 cut(s)	20, 34, 114, 291, 617, 618, 653, 1234
BssMI	GATC	5 cut(s)	44, 62, 379, 594, 1054
BssNI	GRCGYC	2 cut(s)	39, 257
BssT1I	CCWWGG	3 cut(s)	34, 291, 653
Bst2UI	CCWGG	4 cut(s)	98, 272, 619, 1236
Bst4CI	ACNGT	4 cut(s)	388, 722, 760, 1153
Bst6I	CTCTTC	3 cut(s)	1439, 1459, 1480
BstACI	GRCGYC	2 cut(s)	39, 257
BstAUI	TGTACA	1 cut(s)	891
BstBAI	YACGTR	1 cut(s)	88
BstC8I	GCNNGC	1 cut(s)	564
BstDEI	CTNAG	3 cut(s)	780, 998, 1170
BstF5I	GGATG	5 cut(s)	220, 355, 469, 1291, 1312
BstFNI	CGCG	2 cut(s)	241, 1500
BstHHI	GCGC	2 cut(s)	246, 313
BstKTI	GATC	5 cut(s)	47, 65, 382, 597, 1057
BstMAI	GTCTC	1 cut(s)	499
BstMBI	GATC	5 cut(s)	44, 62, 379, 594, 1054
BstMWI	GCNNNNNNNGC	5 cut(s)	131, 225, 568, 634, 825
BstNI	CCWGG	4 cut(s)	98, 272, 619, 1236
BstNSI	RCATGY	2 cut(s)	777, 1393
BstSCI	CCNGG	5 cut(s)	20, 96, 270, 617, 1234
BstSFI	CTRYAG	2 cut(s)	423, 759
BstSLI	GKGCMC	1 cut(s)	441
BstUI	CGCG	2 cut(s)	241, 1500
BstV1I	GCAGC	2 cut(s)	634, 973
BstX2I	RGATCY	3 cut(s)	44, 62, 1054
BstYI	RGATCY	3 cut(s)	44, 62, 1054
BsuRI	GGCC	3 cut(s)	119, 158, 200
BtsCI	GGATG	5 cut(s)	220, 355, 469, 1291, 1312
BtsIMutI	CAGTG	3 cut(s)	441, 727, 1006
BveI	ACCTGC	2 cut(s)	237, 1024
Cac8I	GCNNGC	1 cut(s)	564
CaiI	CAGNNNCTG	1 cut(s)	374
CfoI	GCGC	2 cut(s)	246, 313
Cfr13I	GGNCC	5 cut(s)	24, 81, 146, 917, 1104
CseI	GACGC	2 cut(s)	28, 246
Csp6I	GTAC	4 cut(s)	420, 892, 1362, 1514
CviAII	CATG	6 cut(s)	202, 774, 815, 1076, 1390, 1405
CviQI	GTAC	4 cut(s)	420, 892, 1362, 1514
DdeI	CTNAG	3 cut(s)	780, 998, 1170
DpnI	GATC	5 cut(s)	46, 64, 381, 596, 1056
DpnII	GATC	5 cut(s)	44, 62, 379, 594, 1054
DraI	TTTAAA	1 cut(s)	843
DraIII	CACNNNGTG	1 cut(s)	196
DrdI	GACNNNNNNGTC	1 cut(s)	725
DseDI	GACNNNNNNGTC	1 cut(s)	725
EaeI	YGGCCR	2 cut(s)	156, 198
Eam1104I	CTCTTC	3 cut(s)	1439, 1459, 1480
EarI	CTCTTC	3 cut(s)	1439, 1459, 1480
Ecl136II	GAGCTC	1 cut(s)	71
Eco130I	CCWWGG	3 cut(s)	34, 291, 653
Eco24I	GRGCYC	4 cut(s)	73, 467, 607, 1451
Eco47I	GGWCC	5 cut(s)	24, 81, 146, 917, 1104
Eco53kI	GAGCTC	1 cut(s)	71
Eco57I	CTGAAG	3 cut(s)	887, 1122, 1452
Eco88I	CYCGRG	1 cut(s)	66
EcoICRI	GAGCTC	1 cut(s)	71
EcoO109I	RGGNCCY	1 cut(s)	917
EcoRI	GAATTC	1 cut(s)	107
EcoRII	CCWGG	4 cut(s)	96, 270, 617, 1234
EcoT14I	CCWWGG	3 cut(s)	34, 291, 653
EcoT22I	ATGCAT	1 cut(s)	1391
EcoT38I	GRGCYC	4 cut(s)	73, 467, 607, 1451
ErhI	CCWWGG	3 cut(s)	34, 291, 653
FaeI	CATG	6 cut(s)	205, 777, 818, 1079, 1393, 1408
FaqI	GGGAC	2 cut(s)	752, 1090
FatI	CATG	6 cut(s)	201, 773, 814, 1075, 1389, 1404
FbaI	TGATCA	2 cut(s)	379, 594
Fnu4HI	GCNGC	4 cut(s)	132, 242, 648, 987
FokI	GGATG	5 cut(s)	227, 362, 456, 1298, 1319
FriOI	GRGCYC	4 cut(s)	73, 467, 607, 1451
Fsp4HI	GCNGC	4 cut(s)	132, 242, 648, 987
FspBI	CTAG	6 cut(s)	744, 825, 908, 1008, 1188, 1353
FspI	TGCGCA	1 cut(s)	312
GlaI	GCGC	2 cut(s)	245, 312
GluI	GCNGC	4 cut(s)	132, 242, 648, 987
GsuI	CTGGAG	2 cut(s)	729, 957
HaeIII	GGCC	3 cut(s)	119, 158, 200
HapII	CCGG	2 cut(s)	22, 120
HgaI	GACGC	2 cut(s)	28, 246
HhaI	GCGC	2 cut(s)	246, 313
Hin1I	GRCGYC	2 cut(s)	39, 257
Hin1II	CATG	6 cut(s)	205, 777, 818, 1079, 1393, 1408
Hin6I	GCGC	2 cut(s)	244, 311
HinP1I	GCGC	2 cut(s)	244, 311
HincII	GTYRAC	1 cut(s)	1099
HindII	GTYRAC	1 cut(s)	1099
HinfI	GANTC	7 cut(s)	788, 950, 1174, 1265, 1356, 1370, 1397
HpaII	CCGG	2 cut(s)	22, 120
HphI	GGTGA	2 cut(s)	260, 389
Hpy166II	GTNNAC	3 cut(s)	718, 1039, 1099
Hpy188III	TCNNGA	9 cut(s)	48, 66, 407, 482, 504, 936, 1049, 1162, 1367
Hpy8I	GTNNAC	3 cut(s)	718, 1039, 1099
HpyAV	CCTTC	6 cut(s)	37, 636, 793, 940, 1245, 1304
HpyCH4III	ACNGT	4 cut(s)	388, 722, 760, 1153
HpyCH4IV	ACGT	1 cut(s)	87
HpyCH4V	TGCA	8 cut(s)	263, 281, 425, 540, 566, 925, 1208, 1389
HpyF10VI	GCNNNNNNNGC	5 cut(s)	131, 225, 568, 634, 825
HpyF3I	CTNAG	3 cut(s)	780, 998, 1170
HpySE526I	ACGT	1 cut(s)	87
Hsp92I	GRCGYC	2 cut(s)	39, 257
Hsp92II	CATG	6 cut(s)	205, 777, 818, 1079, 1393, 1408
HspAI	GCGC	2 cut(s)	244, 311
Ksp22I	TGATCA	2 cut(s)	379, 594
Kzo9I	GATC	5 cut(s)	44, 62, 379, 594, 1054
LguI	GCTCTTC	1 cut(s)	1439
LmnI	GCTCC	6 cut(s)	76, 122, 518, 655, 657, 710
Lsp1109I	GCAGC	2 cut(s)	634, 973
LweI	GCATC	6 cut(s)	272, 322, 527, 669, 973, 1167
MaeI	CTAG	6 cut(s)	744, 825, 908, 1008, 1188, 1353
MaeII	ACGT	1 cut(s)	87
MaeIII	GTNAC	4 cut(s)	364, 763, 1087, 1178
MalI	GATC	5 cut(s)	46, 64, 381, 596, 1056
MboI	GATC	5 cut(s)	44, 62, 379, 594, 1054
MflI	RGATCY	3 cut(s)	44, 62, 1054
MhlI	GDGCHC	6 cut(s)	73, 141, 441, 467, 607, 1451
MlsI	TGGCCA	2 cut(s)	158, 200
MluCI	AATT	7 cut(s)	107, 360, 541, 1209, 1221, 1323, 1341
MluNI	TGGCCA	2 cut(s)	158, 200
MlyI	GAGTC	1 cut(s)	797
MmeI	TCCRAC	4 cut(s)	320, 497, 923, 1425
Mox20I	TGGCCA	2 cut(s)	158, 200
Mph1103I	ATGCAT	1 cut(s)	1391
MscI	TGGCCA	2 cut(s)	158, 200
MseI	TTAA	6 cut(s)	675, 681, 842, 1326, 1335, 1344
MslI	CAYNNNNRTG	2 cut(s)	318, 772
Msp20I	TGGCCA	2 cut(s)	158, 200
MspA1I	CMGCKG	1 cut(s)	707
MspI	CCGG	2 cut(s)	22, 120
MspR9I	CCNGG	5 cut(s)	22, 98, 272, 619, 1236
Mva1269I	GAATGC	1 cut(s)	325
MvaI	CCWGG	4 cut(s)	98, 272, 619, 1236
MvnI	CGCG	2 cut(s)	241, 1500
MwoI	GCNNNNNNNGC	5 cut(s)	131, 225, 568, 634, 825
NciI	CCSGG	1 cut(s)	22
NdeII	GATC	5 cut(s)	44, 62, 379, 594, 1054
NlaIII	CATG	6 cut(s)	205, 777, 818, 1079, 1393, 1408
NlaIV	GGNNCC	4 cut(s)	64, 514, 918, 1106
NmeAIII	GCCGAG	2 cut(s)	160, 233
NmuCI	GTSAC	2 cut(s)	364, 763
NsbI	TGCGCA	1 cut(s)	312
NsiI	ATGCAT	1 cut(s)	1391
NspI	RCATGY	2 cut(s)	777, 1393
PasI	CCCWGGG	1 cut(s)	618
PciI	ACATGT	1 cut(s)	773
PciSI	GCTCTTC	1 cut(s)	1439
PctI	GAATGC	1 cut(s)	325
PfeI	GAWTC	6 cut(s)	950, 1174, 1265, 1356, 1370, 1397
PflFI	GACNNNGTC	1 cut(s)	722
PkrI	GCNGC	4 cut(s)	133, 243, 649, 988
PleI	GAGTC	1 cut(s)	796
PpsI	GAGTC	1 cut(s)	796
Ppu21I	YACGTR	1 cut(s)	88
PpuMI	RGGWCCY	1 cut(s)	917
PscI	ACATGT	1 cut(s)	773
Psp124BI	GAGCTC	1 cut(s)	73
Psp5II	RGGWCCY	1 cut(s)	917
Psp6I	CCWGG	4 cut(s)	96, 270, 617, 1234
PspGI	CCWGG	4 cut(s)	96, 270, 617, 1234
PspN4I	GGNNCC	4 cut(s)	64, 514, 918, 1106
PspPI	GGNCC	5 cut(s)	24, 81, 146, 917, 1104
PspPPI	RGGWCCY	1 cut(s)	917
PstI	CTGCAG	1 cut(s)	427
PstNI	CAGNNNCTG	1 cut(s)	374
PsuI	RGATCY	3 cut(s)	44, 62, 1054
PsyI	GACNNNGTC	1 cut(s)	722
RsaI	GTAC	4 cut(s)	421, 893, 1363, 1515
RsaNI	GTAC	4 cut(s)	420, 892, 1362, 1514
RseI	CAYNNNNRTG	2 cut(s)	318, 772
SacI	GAGCTC	1 cut(s)	73
SapI	GCTCTTC	1 cut(s)	1439
SaqAI	TTAA	6 cut(s)	675, 681, 842, 1326, 1335, 1344
SatI	GCNGC	4 cut(s)	132, 242, 648, 987
Sau3AI	GATC	5 cut(s)	44, 62, 379, 594, 1054
Sau96I	GGNCC	5 cut(s)	24, 81, 146, 917, 1104
SchI	GAGTC	1 cut(s)	797
ScrFI	CCNGG	5 cut(s)	22, 98, 272, 619, 1236
SduI	GDGCHC	6 cut(s)	73, 141, 441, 467, 607, 1451
SfaNI	GCATC	6 cut(s)	272, 322, 527, 669, 973, 1167
SfcI	CTRYAG	2 cut(s)	423, 759
SinI	GGWCC	5 cut(s)	24, 81, 146, 917, 1104
SmiI	ATTTAAAT	1 cut(s)	843
SmiMI	CAYNNNNRTG	2 cut(s)	318, 772
SmlI	CTYRAG	2 cut(s)	223, 1047
SmoI	CTYRAG	2 cut(s)	223, 1047
Sse9I	AATT	7 cut(s)	107, 360, 541, 1209, 1221, 1323, 1341
SsiI	CCGC	6 cut(s)	79, 132, 241, 323, 705, 1498
SspI	AATATT	1 cut(s)	1065
SspMI	CTAG	6 cut(s)	744, 825, 908, 1008, 1188, 1353
SstI	GAGCTC	1 cut(s)	73
StyD4I	CCNGG	5 cut(s)	20, 96, 270, 617, 1234
StyI	CCWWGG	3 cut(s)	34, 291, 653
SwaI	ATTTAAAT	1 cut(s)	843
TaaI	ACNGT	4 cut(s)	388, 722, 760, 1153
TaiI	ACGT	1 cut(s)	90
TaqI	TCGA	1 cut(s)	234
TasI	AATT	7 cut(s)	107, 360, 541, 1209, 1221, 1323, 1341
TatI	WGTACW	3 cut(s)	419, 891, 1361
TauI	GCSGC	2 cut(s)	134, 244
TfiI	GAWTC	6 cut(s)	950, 1174, 1265, 1356, 1370, 1397
Tru1I	TTAA	6 cut(s)	675, 681, 842, 1326, 1335, 1344
Tru9I	TTAA	6 cut(s)	675, 681, 842, 1326, 1335, 1344
TscAI	CASTG	3 cut(s)	448, 727, 1006
TseFI	GTSAC	2 cut(s)	364, 763
TseI	GCWGC	2 cut(s)	647, 986
Tsp45I	GTSAC	2 cut(s)	364, 763
TspDTI	ATGAA	5 cut(s)	803, 1274, 1323, 1335, 1457
TspGWI	ACGGA	2 cut(s)	75, 159
TspRI	CASTG	3 cut(s)	448, 727, 1006
Tth111I	GACNNNGTC	1 cut(s)	722
VpaK11BI	GGWCC	5 cut(s)	24, 81, 146, 917, 1104
XapI	RAATTY	1 cut(s)	107
XceI	RCATGY	2 cut(s)	777, 1393
XcmI	CCANNNNNNNNNTGG	2 cut(s)	842, 1115
XspI	CTAG	6 cut(s)	744, 825, 908, 1008, 1188, 1353
Zsp2I	ATGCAT	1 cut(s)	1391

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.