AT3G45780

PAS fold

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0004648
Physical Location & Seq
Forward (+)
16816721 .. 16824210
7490 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G45780.1

Sequence Viewer

Length: 2991 bp
ATGGAACCAACAGAAAAACCATCGACCAAACCATCTTCTCGGACTCTACCTAGAGACACTCGTGGCTCTCTCGAAGTATTCAACCCGTCAACTCAGCTGACCCGACCCGATAACCCGGTGTTCCGTCCTGAACCACCAGCGTGGCAAAACTTGAGTGATCCACGTGGCACCAGTCCTCAACCCCGACCACAACAAGAACCAGCTCCATCCAACCCTGTTCGGTCTGATCAAGAAATCGCTGTCACGACCTCATGGATGGCTCTGAAAGACCCATCACCGGAGACAATCTCCAAGAAGACGATCACCGCCGAGAAACCACAGAAGTCGGCGGTGGCGGCTGAGCAGAGAGCGGCAGAGTGGGGATTGGTTTTGAAGACCGATACAAAGACGGGAAAGCCACAAGGAGTAGGCGTGAGGAACTCTGGTGGAACTGAGAATGATCCTAACGGGAAAAAGACTACATCGCAGAGAAACTCGCAAAACTCTTGCCGGAGCTCCGGTGAGATGTCGGACGGAGATGTTCCCGGCGGGAGGAGTGGGATTCCAAGAGTATCGGAAGATCTAAAAGATGCGTTGTCGACGTTTCAACAAACGTTTGTGGTCTCAGATGCTACAAAACCTGATTATCCGATTATGTATGCAAGTGCTGGTTTCTTCAATATGACTGGTTACACTTCCAAAGAAGTCGTCGGCAGAAACTGCCGATTTTTACAAGGATCAGGTACAGATGCAGATGAGTTAGCAAAGATAAGAGAGACATTAGCTGCTGGTAACAATTATTGTGGGCGTATATTGAATTACAAGAAAGATGGGACCTCTTTTTGGAATCTTCTCACGATTGCTCCCATTAAAGACGAGAGTGGCAAAGTCCTCAAATTTATCGGAATGCAAGTGGAGGTGAGCAAGCACACTGAAGGGGCCAAAGAAAAGGCTTTGAGGCCCAATGGGCTTCCGGAATCTCTGATTCGATACGATGCCCGCCAAAAAGATATGGCGACAAACTCAGTGACAGAGCTAGTAGAGGCGGTGAAGAGACCTCGGGCACTAAGCGAATCGACGAATCTCCATCCCTTCATGACAAAATCGGAGAGCGATGAACTTCCGAAAAAACCAGCTCGGCGAATGTCCGAAAATGTTGTTCCGTCAGGCCGAAGAAACTCTGGCGGCGGAAGAAGAAACTCGATGCAGCGAATCAACGAAATTCCCGAGAAAAAATCTAGAAAATCTTCCCTTTCCTTCATGGGGATCAAGAAGAAGAGCGAATCTTTGGATGAATCTATAGACGATGGATTTATAGAGTATGGAGAAGAAGACGATGAGATTAGTGATAGGGACGAGAGACCTGAGAGTGTGGATGATAAAGTGAGACAAAAGGAAATGAGAAAGGGTATTGATCTAGCTACTACACTCGAACGTATCGAGAAGAATTTCGTCATCACTGATCCTAGGCTTCCCGATAATCCCATTATTTTTGCATCTGATAGTTTCTTGGAGCTCACGGAATATAGCCGTGAAGAAATTCTTGGAAGAAATTGCAGGTTTCTACAAGGTCCAGAGACTGATCTAACCACAGTGAAGAAGATTCGAAATGCTATTGATAACCAAACCGAAGTGACAGTTCAGCTCATCAACTACACCAAGAGCGGAAAGAAGTTCTGGAACATTTTCCACTTGCAACCTATGCGTGATCAGAAGGGAGAAGTACAATACTTTATTGGAGTTCAACTAGACGGGAGCAAGCACGTAGAACCAGTTCGCAATGTCATTGAAGAAACCGCAGTGAAAGAGGGAGAAGACCTGGTGAAAAAAACAGCTGTGAATATCGATGAAGCGGTTCGAGAACTTCCTGATGCCAACATGACACCAGAGGATTTATGGGCAAACCACTCAAAGGTTGTTCATTGTAAGCCTCACAGGAAAGATTCACCACCATGGATAGCTATCCAAAAGGTGTTGGAAAGTGGTGAACCGATTGGTTTGAAGCATTTCAAACCGGTGAAACCTTTGGGTTCTGGTGACACAGGAAGTGTGCATCTAGTGGAACTCGTTGGAACAGATCAGTTGTTTGCAATGAAAGCAATGGACAAGGCTGTTATGCTTAACCGAAACAAAGTACATAGAGCTAGAGCTGAGAGAGAGATCCTAGATTTGCTTGACCATCCTTTTCTTCCTGCACTCTACGCTTCTTTTCAGACAAAAACACATATATGTCTTATAACAGATTACTATCCAGGAGGAGAACTCTTCATGCTCCTAGATCGACAACCTAGGAAGGTTCTCAAAGAAGATGCTGTAAGATTCTATGCTGCTCAAGTTGTCGTTGCACTCGAGTATCTTCACTGTCAAGGAATAATTTACCGAGACTTGAAACCGGAAAACGTTTTAATCCAAGGCAATGGCGATATCTCTTTGTCGGATTTTGATCTGTCTTGCTTGACATCTTGCAAACCTCAGCTGTTGATTCCGAGTATAGACGAGAAGAAGAAGAAAAAGCAACAAAAGAGTCAACAAACTCCAATCTTCATGGCTGAACCAATGCGTGCATCAAACTCATTTGTTGGCACTGAAGAGTACATTGCTCCGGAAATTATATCCGGAGCAGGACATACGAGTGCAGTAGACTGGTGGGCTCTTGGTATACTTATGTATGAAATGTTATACGGATACACTCCTTTTAGAGGAAAAACAAGACAGAAGACTTTCACCAATGTTCTTCAAAAAGATCTCAAGTTTCCAGCTAGCATTCCTGCAAGTCTTCAAGTGAAACAGCTGATTTTTAGGCTGTTACAACGAGATCCGAAGAAAAGACTAGGTTGTTTTGAAGGAGCAAATGAAGTCAAGCAACATTCTTTCTTCAAAGGCATAAATTGGGCTCTGATTCGATGCACGAACCCTCCAGAGCTCGAGACTCCGATATTTTCTGGTGAAGCTGAAAACGGAGAGAAAGTTGTTGATCCTGAGCTAGAAGATCTGCAAACAAATGTTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0007623 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0009657 GO:0009658 GO:0009785 GO:0009881 GO:0009882 GO:0009898 GO:0009902 GO:0009903 GO:0009904 GO:0009986 GO:0009987 GO:0010119 GO:0010155 GO:0010181 GO:0010359 GO:0010360 GO:0010361 GO:0010362 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019750 GO:0022898 GO:0023052 GO:0030522 GO:0032409 GO:0032410 GO:0032412 GO:0032413 GO:0032553 GO:0032879 GO:0034762 GO:0034763 GO:0034765 GO:0034766 GO:0035556 GO:0036094 GO:0036211 GO:0038023 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043271 GO:0043412 GO:0044070 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046777 GO:0048037 GO:0048511 GO:0048519 GO:0050662 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0051716 GO:0060089 GO:0065007 GO:0065009 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0098552 GO:0098562 GO:0104004 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1903792 GO:1903959 GO:1903960 GO:1904062
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAS_9 Pkinase

Protein Analysis

996

Amino Acids

111.69

Weight (kDa)

7.54

Isoelectric Point (pI)

40.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAS_9 PF13426 205 - 301 2.6e-19 PAS domain
PAS_3 PF08447 211 - 295 1e-06 PAS fold
PAS PF00989 211 - 296 9.2e-06 PAS fold
PAS_9 PF13426 485 - 577 1.8e-19 PAS domain
PAS PF00989 488 - 577 5.1e-07 PAS fold
PAS_3 PF08447 489 - 574 1.9e-06 PAS fold
Pkinase PF00069 665 - 952 3.8e-61 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 667 - 937 1.2e-25 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2216
Acc36I ACCTGC 1 cut(s) 1527
AccB1I GGYRCC 1 cut(s) 167
AccBSI CCGCTC 2 cut(s) 350, 1644
AccI GTMKAC 3 cut(s) 578, 2619, 2638
AccIII TCCGGA 3 cut(s) 952, 2581, 2594
AclI AACGTT 2 cut(s) 593, 2379
AclWI GGATC 8 cut(s) 152, 434, 724, 1253, 1436, 2134, 2789, 2948
AcsI RAATTY 4 cut(s) 875, 1200, 1426, 1518
AcuI CTGAAG 2 cut(s) 933, 2586
AcvI CACGTG 1 cut(s) 164
AfaI GTAC 4 cut(s) 724, 1704, 2115, 2573
AfiI CCNNNNNNNGG 6 cut(s) 277, 531, 822, 1242, 1891, 2678
AgeI ACCGGT 1 cut(s) 1993
AjnI CCWGG 2 cut(s) 1797, 2230
AjuI GAANNNNNNNTTGG 2 cut(s) 1506, 1538
AleI CACNNNNGTG 1 cut(s) 139
Alw21I GWGCWC 3 cut(s) 497, 1497, 2904
AlwI GGATC 8 cut(s) 152, 434, 724, 1253, 1436, 2134, 2789, 2948
AlwNI CAGNNNCTG 2 cut(s) 699, 1559
Ama87I CYCGRG 4 cut(s) 1038, 1205, 2327, 2903
Aor13HI TCCGGA 3 cut(s) 952, 2581, 2594
AoxI GGCC 3 cut(s) 918, 938, 1147
ApeKI GCWGC 3 cut(s) 764, 1186, 2306
ApoI RAATTY 4 cut(s) 875, 1200, 1426, 1518
ArsI GACNNNNNNTTYG 2 cut(s) 672, 704
AsiGI ACCGGT 1 cut(s) 1993
Asp700I GAANNNNTTC 8 cut(s) 1225, 1427, 1518, 1664, 1752, 1833, 1985, 2699
AspA2I CCTAGG 2 cut(s) 1445, 2267
AspS9I GGNCC 4 cut(s) 813, 918, 939, 1550
AsuC2I CCSGG 2 cut(s) 116, 525
AsuII TTCGAA 1 cut(s) 1585
AsuNHI GCTAGC 1 cut(s) 2738
AvaI CYCGRG 4 cut(s) 1038, 1205, 2327, 2903
AvaII GGWCC 2 cut(s) 813, 1550
AvrII CCTAGG 2 cut(s) 1445, 2267
BaeGI GKGCMC 1 cut(s) 1045
BaeI ACNNNNGTAYC 2 cut(s) 2315, 2348
BanI GGYRCC 1 cut(s) 167
BanII GRGCYC 5 cut(s) 497, 1497, 2632, 2875, 2904
BauI CACGAG 1 cut(s) 60
BbrPI CACGTG 1 cut(s) 164
BbsI GAAGAC 6 cut(s) 302, 380, 1317, 1800, 2702, 2747
Bbv12I GWGCWC 3 cut(s) 497, 1497, 2904
BbvCI CCTCAGC 1 cut(s) 2451
BbvI GCAGC 3 cut(s) 751, 1198, 2293
BccI CCATC 9 cut(s) 28, 40, 214, 250, 280, 803, 1074, 1280, 2166
BceAI ACGGC 1 cut(s) 1494
BciT130I CCWGG 2 cut(s) 1799, 2232
BciVI GTATCC 1 cut(s) 2657
BclI TGATCA 2 cut(s) 226, 1687
BcnI CCSGG 2 cut(s) 116, 525
BfmI CTRYAG 1 cut(s) 1278
BfuAI ACCTGC 1 cut(s) 1527
BfuI GTATCC 1 cut(s) 2657
BglI GCCNNNNNGGC 1 cut(s) 946
BglII AGATCT 3 cut(s) 559, 2722, 2968
BisI GCNGC 6 cut(s) 336, 351, 765, 1165, 1187, 2307
BlnI CCTAGG 2 cut(s) 1445, 2267
BlpI GCTNAGC 1 cut(s) 339
BlsI GCNGC 6 cut(s) 337, 352, 766, 1166, 1188, 2308
Bme1390I CCNGG 4 cut(s) 116, 525, 1799, 2232
Bme18I GGWCC 2 cut(s) 813, 1550
BmeT110I CYCGRG 4 cut(s) 1038, 1205, 2327, 2903
BmgT120I GGNCC 4 cut(s) 813, 918, 939, 1550
BmiI GGNNCC 4 cut(s) 6, 169, 814, 919
BmrFI CCNGG 4 cut(s) 116, 525, 1799, 2232
BmtI GCTAGC 1 cut(s) 2742
BpiI GAAGAC 6 cut(s) 302, 380, 1317, 1800, 2702, 2747
BplI GAGNNNNNCTC 4 cut(s) 272, 304, 2226, 2258
BpmI CTGGAG 1 cut(s) 2880
Bpu10I CCTNAGC 2 cut(s) 2451, 2958
Bpu1102I GCTNAGC 1 cut(s) 339
Bpu14I TTCGAA 1 cut(s) 1585
BpuEI CTTGAG 3 cut(s) 172, 2295, 2711
BpuMI CCSGG 2 cut(s) 116, 525
Bsa29I ATCGAT 1 cut(s) 1824
BsaAI YACGTR 2 cut(s) 164, 1744
BsaBI GATNNNNATC 3 cut(s) 1940, 2226, 2421
BsaI GGTCTC 3 cut(s) 607, 1027, 1333
BsaJI CCNNGG 5 cut(s) 1037, 1445, 1931, 2267, 2389
BsaWI WCCGGW 7 cut(s) 277, 497, 952, 1993, 2371, 2581, 2594
Bsc4I CCNNNNNNNGG 6 cut(s) 277, 531, 822, 1242, 1891, 2678
Bse118I RCCGGY 1 cut(s) 1993
Bse1I ACTGG 4 cut(s) 171, 670, 1751, 2627
Bse3DI GCAATG 5 cut(s) 1765, 2076, 2085, 2401, 2574
Bse8I GATNNNNATC 3 cut(s) 1940, 2226, 2421
BseAI TCCGGA 3 cut(s) 952, 2581, 2594
BseBI CCWGG 2 cut(s) 1799, 2232
BseCI ATCGAT 1 cut(s) 1824
BseDI CCNNGG 5 cut(s) 1037, 1445, 1931, 2267, 2389
BseGI GGATG 6 cut(s) 206, 261, 1066, 1276, 1360, 2158
BseJI GATNNNNATC 3 cut(s) 1940, 2226, 2421
BseLI CCNNNNNNNGG 6 cut(s) 277, 531, 822, 1242, 1891, 2678
BseMI GCAATG 5 cut(s) 1765, 2076, 2085, 2401, 2574
BseMII CTCAG 9 cut(s) 107, 330, 423, 618, 1017, 1335, 2121, 2465, 2949
BseNI ACTGG 4 cut(s) 171, 670, 1751, 2627
BseRI GAGGAG 2 cut(s) 547, 2250
BseSI GKGCMC 1 cut(s) 1045
BseXI GCAGC 3 cut(s) 751, 1198, 2293
BsgI GTGCAG 2 cut(s) 2157, 2634
BshFI GGCC 3 cut(s) 920, 940, 1149
BshNI GGYRCC 1 cut(s) 167
BshTI ACCGGT 1 cut(s) 1993
BshVI ATCGAT 1 cut(s) 1824
BsiHKAI GWGCWC 3 cut(s) 497, 1497, 2904
BsiHKCI CYCGRG 4 cut(s) 1038, 1205, 2327, 2903
BslFI GGGAC 2 cut(s) 826, 1346
BslI CCNNNNNNNGG 6 cut(s) 277, 531, 822, 1242, 1891, 2678
BsmFI GGGAC 2 cut(s) 826, 1346
BsmI GAATGC 2 cut(s) 891, 2742
BsnI GGCC 3 cut(s) 920, 940, 1149
Bso31I GGTCTC 3 cut(s) 607, 1027, 1333
BsoBI CYCGRG 4 cut(s) 1038, 1205, 2327, 2903
Bsp119I TTCGAA 1 cut(s) 1585
Bsp1286I GDGCHC 6 cut(s) 497, 1045, 1497, 2632, 2875, 2904
Bsp13I TCCGGA 3 cut(s) 952, 2581, 2594
Bsp1720I GCTNAGC 1 cut(s) 339
Bsp19I CCATGG 1 cut(s) 1931
BspANI GGCC 3 cut(s) 920, 940, 1149
BspCNI CTCAG 9 cut(s) 106, 331, 424, 617, 1016, 1336, 2122, 2464, 2950
BspDI ATCGAT 1 cut(s) 1824
BspEI TCCGGA 3 cut(s) 952, 2581, 2594
BspHI TCATGA 1 cut(s) 1074
BspLI GGNNCC 4 cut(s) 6, 169, 814, 919
BspMI ACCTGC 1 cut(s) 1527
BspOI GCTAGC 1 cut(s) 2742
BspPI GGATC 8 cut(s) 152, 434, 724, 1253, 1436, 2134, 2789, 2948
BspQI GCTCTTC 1 cut(s) 1250
BspT104I TTCGAA 1 cut(s) 1585
BspT107I GGYRCC 1 cut(s) 167
BspTNI GGTCTC 3 cut(s) 607, 1027, 1333
BsrBI CCGCTC 2 cut(s) 350, 1644
BsrDI GCAATG 5 cut(s) 1765, 2076, 2085, 2401, 2574
BsrFI RCCGGY 1 cut(s) 1993
BsrI ACTGG 4 cut(s) 171, 670, 1751, 2627
BssAI RCCGGY 1 cut(s) 1993
BssECI CCNNGG 5 cut(s) 1037, 1445, 1931, 2267, 2389
BssNAI GTATAC 1 cut(s) 2639
BssSI CACGAG 1 cut(s) 60
BssT1I CCWWGG 4 cut(s) 1445, 1931, 2267, 2389
Bst1107I GTATAC 1 cut(s) 2639
Bst2BI CACGAG 1 cut(s) 60
Bst2UI CCWGG 2 cut(s) 1799, 2232
Bst4CI ACNGT 3 cut(s) 1573, 1618, 2342
Bst6I CTCTTC 4 cut(s) 1025, 1250, 2249, 2562
BstAPI GCANNNNNTGC 2 cut(s) 699, 1681
BstBAI YACGTR 2 cut(s) 164, 1744
BstBI TTCGAA 1 cut(s) 1585
BstC8I GCNNGC 5 cut(s) 905, 979, 1739, 2541, 2740
BstDSI CCRYGG 1 cut(s) 1931
BstENI CCTNNNNNAGG 1 cut(s) 2676
BstF5I GGATG 6 cut(s) 206, 261, 1066, 1276, 1360, 2158
BstMWI GCNNNNNNNGC 6 cut(s) 335, 699, 946, 1681, 2075, 2180
BstNI CCWGG 2 cut(s) 1799, 2232
BstSCI CCNGG 4 cut(s) 114, 523, 1797, 2230
BstSFI CTRYAG 1 cut(s) 1278
BstSLI GKGCMC 1 cut(s) 1045
BstV1I GCAGC 3 cut(s) 751, 1198, 2293
BstV2I GAAGAC 6 cut(s) 302, 380, 1317, 1800, 2702, 2747
BstX2I RGATCY 5 cut(s) 559, 2139, 2722, 2794, 2968
BstXI CCANNNNNNTGG 2 cut(s) 141, 2396
BstYI RGATCY 5 cut(s) 559, 2139, 2722, 2794, 2968
BstZ17I GTATAC 1 cut(s) 2639
Bsu15I ATCGAT 1 cut(s) 1824
BsuI GTATCC 1 cut(s) 2657
BsuRI GGCC 3 cut(s) 920, 940, 1149
BsuTUI ATCGAT 1 cut(s) 1824
BtgI CCRYGG 1 cut(s) 1931
BtgZI GCGATG 2 cut(s) 447, 1107
BtsCI GGATG 6 cut(s) 206, 261, 1066, 1276, 1360, 2158
BtsI GCAGTG 1 cut(s) 1785
BtsIMutI CAGTG 7 cut(s) 909, 1011, 1437, 1578, 1785, 2338, 2562
BveI ACCTGC 1 cut(s) 1527
Cac8I GCNNGC 5 cut(s) 905, 979, 1739, 2541, 2740
CaiI CAGNNNCTG 2 cut(s) 699, 1559
CciI TCATGA 1 cut(s) 1074
Cfr10I RCCGGY 1 cut(s) 1993
Cfr13I GGNCC 4 cut(s) 813, 918, 939, 1550
ClaI ATCGAT 1 cut(s) 1824
CsiI ACCWGGT 1 cut(s) 1797
Csp6I GTAC 4 cut(s) 723, 1703, 2114, 2572
CspAI ACCGGT 1 cut(s) 1993
CspCI CAANNNNNGTGG 2 cut(s) 763, 798
CviAII CATG 7 cut(s) 252, 1075, 1240, 1858, 1932, 2248, 2524
CviQI GTAC 4 cut(s) 723, 1703, 2114, 2572
Eam1104I CTCTTC 4 cut(s) 1025, 1250, 2249, 2562
EarI CTCTTC 4 cut(s) 1025, 1250, 2249, 2562
EciI GGCGGA 1 cut(s) 1182
Ecl136II GAGCTC 3 cut(s) 495, 1495, 2902
Eco130I CCWWGG 4 cut(s) 1445, 1931, 2267, 2389
Eco24I GRGCYC 5 cut(s) 497, 1497, 2632, 2875, 2904
Eco31I GGTCTC 3 cut(s) 607, 1027, 1333
Eco32I GATATC 1 cut(s) 2404
Eco47I GGWCC 2 cut(s) 813, 1550
Eco53kI GAGCTC 3 cut(s) 495, 1495, 2902
Eco57I CTGAAG 2 cut(s) 933, 2586
Eco72I CACGTG 1 cut(s) 164
Eco88I CYCGRG 4 cut(s) 1038, 1205, 2327, 2903
EcoICRI GAGCTC 3 cut(s) 495, 1495, 2902
EcoNI CCTNNNNNAGG 1 cut(s) 2676
EcoO109I RGGNCCY 1 cut(s) 813
EcoRII CCWGG 2 cut(s) 1797, 2230
EcoRV GATATC 1 cut(s) 2404
EcoT14I CCWWGG 4 cut(s) 1445, 1931, 2267, 2389
EcoT38I GRGCYC 5 cut(s) 497, 1497, 2632, 2875, 2904
ErhI CCWWGG 4 cut(s) 1445, 1931, 2267, 2389
FaeI CATG 7 cut(s) 255, 1078, 1243, 1861, 1935, 2251, 2527
FalI AAGNNNNNCTT 2 cut(s) 1506, 1538
FaqI GGGAC 2 cut(s) 826, 1346
FatI CATG 7 cut(s) 251, 1074, 1239, 1857, 1931, 2247, 2523
FauI CCCGC 2 cut(s) 521, 986
FbaI TGATCA 2 cut(s) 226, 1687
FblI GTMKAC 3 cut(s) 578, 2619, 2638
Fnu4HI GCNGC 6 cut(s) 336, 351, 765, 1165, 1187, 2307
FokI GGATG 6 cut(s) 193, 268, 1053, 1283, 1367, 2145
FriOI GRGCYC 5 cut(s) 497, 1497, 2632, 2875, 2904
Fsp4HI GCNGC 6 cut(s) 336, 351, 765, 1165, 1187, 2307
GluI GCNGC 6 cut(s) 336, 351, 765, 1165, 1187, 2307
GsuI CTGGAG 1 cut(s) 2880
HaeIII GGCC 3 cut(s) 920, 940, 1149
Hin1II CATG 7 cut(s) 255, 1078, 1243, 1861, 1935, 2251, 2527
HincII GTYRAC 3 cut(s) 90, 579, 2507
HindII GTYRAC 3 cut(s) 90, 579, 2507
Hpy166II GTNNAC 6 cut(s) 90, 579, 1967, 2507, 2620, 2639
Hpy8I GTNNAC 6 cut(s) 90, 579, 1967, 2507, 2620, 2639
Hpy99I CGWCG 3 cut(s) 583, 692, 1060
HpyAV CCTTC 6 cut(s) 908, 1081, 1246, 1687, 2266, 2816
HpyCH4III ACNGT 3 cut(s) 1573, 1618, 2342
HpyCH4IV ACGT 6 cut(s) 163, 581, 593, 1414, 1743, 2379
HpyF10VI GCNNNNNNNGC 6 cut(s) 335, 699, 946, 1681, 2075, 2180
HpySE526I ACGT 6 cut(s) 163, 581, 593, 1414, 1743, 2379
Hsp92II CATG 7 cut(s) 255, 1078, 1243, 1861, 1935, 2251, 2527
Kpn2I TCCGGA 3 cut(s) 952, 2581, 2594
Ksp22I TGATCA 2 cut(s) 226, 1687
LguI GCTCTTC 1 cut(s) 1250
Lsp1109I GCAGC 3 cut(s) 751, 1198, 2293
MabI ACCWGGT 1 cut(s) 1797
MaeII ACGT 6 cut(s) 163, 581, 593, 1414, 1743, 2379
MaeIII GTNAC 7 cut(s) 241, 668, 770, 1006, 1612, 2015, 2784
MbiI CCGCTC 2 cut(s) 350, 1644
MflI RGATCY 5 cut(s) 559, 2139, 2722, 2794, 2968
MhlI GDGCHC 6 cut(s) 497, 1045, 1497, 2632, 2875, 2904
MlyI GAGTC 3 cut(s) 37, 2512, 2902
MmeI TCCRAC 5 cut(s) 234, 489, 1935, 2029, 2394
MroI TCCGGA 3 cut(s) 952, 2581, 2594
MroXI GAANNNNTTC 8 cut(s) 1225, 1427, 1518, 1664, 1752, 1833, 1985, 2699
MseI TTAA 3 cut(s) 849, 2100, 2384
MslI CAYNNNNRTG 4 cut(s) 139, 1930, 2206, 2610
MspA1I CMGCKG 4 cut(s) 97, 1814, 2455, 2770
MspR9I CCNGG 4 cut(s) 116, 525, 1799, 2232
Mva1269I GAATGC 2 cut(s) 891, 2742
MvaI CCWGG 2 cut(s) 1799, 2232
MwoI GCNNNNNNNGC 6 cut(s) 335, 699, 946, 1681, 2075, 2180
NciI CCSGG 2 cut(s) 116, 525
NcoI CCATGG 1 cut(s) 1931
NheI GCTAGC 1 cut(s) 2738
NlaIII CATG 7 cut(s) 255, 1078, 1243, 1861, 1935, 2251, 2527
NlaIV GGNNCC 4 cut(s) 6, 169, 814, 919
NmeAIII GCCGAG 2 cut(s) 334, 1096
NmuCI GTSAC 4 cut(s) 241, 1006, 1612, 2015
NspV TTCGAA 1 cut(s) 1585
OliI CACNNNNGTG 1 cut(s) 139
PaeR7I CTCGAG 2 cut(s) 2327, 2903
PagI TCATGA 1 cut(s) 1074
PciSI GCTCTTC 1 cut(s) 1250
PcsI WCGNNNNNNNCGW 3 cut(s) 1203, 1416, 2325
PctI GAATGC 2 cut(s) 891, 2742
PdmI GAANNNNTTC 8 cut(s) 1225, 1427, 1518, 1664, 1752, 1833, 1985, 2699
PfoI TCCNGGA 1 cut(s) 2230
PinAI ACCGGT 1 cut(s) 1993
PkrI GCNGC 6 cut(s) 337, 352, 766, 1166, 1188, 2308
PleI GAGTC 3 cut(s) 37, 2511, 2902
PmaCI CACGTG 1 cut(s) 164
PmlI CACGTG 1 cut(s) 164
PpsI GAGTC 3 cut(s) 37, 2511, 2902
Ppu21I YACGTR 2 cut(s) 164, 1744
PpuMI RGGWCCY 1 cut(s) 813
PsiI TTATAA 1 cut(s) 2216
Psp124BI GAGCTC 3 cut(s) 497, 1497, 2904
Psp1406I AACGTT 2 cut(s) 593, 2379
Psp5II RGGWCCY 1 cut(s) 813
Psp6I CCWGG 2 cut(s) 1797, 2230
PspCI CACGTG 1 cut(s) 164
PspGI CCWGG 2 cut(s) 1797, 2230
PspN4I GGNNCC 4 cut(s) 6, 169, 814, 919
PspPI GGNCC 4 cut(s) 813, 918, 939, 1550
PspPPI RGGWCCY 1 cut(s) 813
PspXI VCTCGAGB 1 cut(s) 2327
PsrI GAACNNNNNNTAC 2 cut(s) 1737, 1769
PstNI CAGNNNCTG 2 cut(s) 699, 1559
PsuI RGATCY 5 cut(s) 559, 2139, 2722, 2794, 2968
PvuII CAGCTG 4 cut(s) 97, 1814, 2455, 2770
RsaI GTAC 4 cut(s) 724, 1704, 2115, 2573
RsaNI GTAC 4 cut(s) 723, 1703, 2114, 2572
RseI CAYNNNNRTG 4 cut(s) 139, 1930, 2206, 2610
SacI GAGCTC 3 cut(s) 497, 1497, 2904
SalI GTCGAC 1 cut(s) 577
SapI GCTCTTC 1 cut(s) 1250
SaqAI TTAA 3 cut(s) 849, 2100, 2384
SatI GCNGC 6 cut(s) 336, 351, 765, 1165, 1187, 2307
Sau96I GGNCC 4 cut(s) 813, 918, 939, 1550
SchI GAGTC 3 cut(s) 37, 2512, 2902
ScrFI CCNGG 4 cut(s) 116, 525, 1799, 2232
SduI GDGCHC 6 cut(s) 497, 1045, 1497, 2632, 2875, 2904
SexAI ACCWGGT 1 cut(s) 1797
SfcI CTRYAG 1 cut(s) 1278
Sfr274I CTCGAG 2 cut(s) 2327, 2903
SfuI TTCGAA 1 cut(s) 1585
SinI GGWCC 2 cut(s) 813, 1550
SlaI CTCGAG 2 cut(s) 2327, 2903
SmiMI CAYNNNNRTG 4 cut(s) 139, 1930, 2206, 2610
SmlI CTYRAG 5 cut(s) 151, 2310, 2327, 2726, 2903
SmoI CTYRAG 5 cut(s) 151, 2310, 2327, 2726, 2903
SstI GAGCTC 3 cut(s) 497, 1497, 2904
StyD4I CCNGG 4 cut(s) 114, 523, 1797, 2230
StyI CCWWGG 4 cut(s) 1445, 1931, 2267, 2389
TaaI ACNGT 3 cut(s) 1573, 1618, 2342
TaiI ACGT 6 cut(s) 166, 584, 596, 1417, 1746, 2382
TaqII GACCGA 2 cut(s) 210, 392
TatI WGTACW 3 cut(s) 1702, 2113, 2571
TauI GCSGC 3 cut(s) 338, 353, 1167
Tru1I TTAA 3 cut(s) 849, 2100, 2384
Tru9I TTAA 3 cut(s) 849, 2100, 2384
TscAI CASTG 7 cut(s) 916, 1011, 1444, 1578, 1785, 2345, 2569
TseFI GTSAC 4 cut(s) 241, 1006, 1612, 2015
TseI GCWGC 3 cut(s) 764, 1186, 2306
Tsp45I GTSAC 4 cut(s) 241, 1006, 1612, 2015
TspGWI ACGGA 6 cut(s) 113, 528, 1131, 1514, 2676, 2952
TspRI CASTG 7 cut(s) 916, 1011, 1444, 1578, 1785, 2345, 2569
VpaK11BI GGWCC 2 cut(s) 813, 1550
XagI CCTNNNNNAGG 1 cut(s) 2676
XapI RAATTY 4 cut(s) 875, 1200, 1426, 1518
XbaI TCTAGA 1 cut(s) 1217
XcmI CCANNNNNNNNNTGG 1 cut(s) 1872
XhoI CTCGAG 2 cut(s) 2327, 2903
XmaJI CCTAGG 2 cut(s) 1445, 2267
XmiI GTMKAC 3 cut(s) 578, 2619, 2638
XmnI GAANNNNTTC 8 cut(s) 1225, 1427, 1518, 1664, 1752, 1833, 1985, 2699
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.