Rh5BG418100

PAS fold

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0004648
Physical Location & Seq
Forward (+)
67753811 .. 67767322
13512 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG418100.1

Sequence Viewer

Length: 2418 bp
ATGGCGACTCAGGTTCAGACGAGCAAGAAACGAAAGTTCGTCGCCGACGGAGTTTTCTTTGCTGAACTGAATGAGGTTCTGACCAGAGAGCTCGCCGAGGATGGTTACTCCGGTGTCGAAGTGAGGGTCACCCCCGTCCGCACTGAGATCATCATTAGAGCCACTCGCACCCAGAATGTTCTCGGTGAGAAGGGGAGGAGGATTAGAGAGCTAACCTCTGTGCAGGCCGAGTCTCTCCAGTACAAACTCCTTGGAGGGCTTGCCGTTCGCAGGGCATGCTATGGTGTTTTGAGATTTGTCATGGAGAGTGGCGCAAAAGGATGTGAGATTTCCAACACCAGCCCAAGCTCCCATGGAGAAGGAGTTGATTATGAAGTCTTCATTCGCGACGATCCTTCATCTACAATGTCATCGTTCAGAATCAGAGAGAGAATTTTAACCAAGGAAGTCATTGCAGAAATTTCTGTGAATAAAGAAAAGCCAGAAGAAATATTGAAGAGAAGAAGAAGATCGGAAATGGAAGACGAACATTCCGAAACGCCAGCCTCACTCATTCCCCCACTCCCAAGAGACTCCCGCGGCTCCCTCGAAGTCTTCAACCCCTCCTCCTCGACCCGACCCGCCAGCCCCCCACCCTTCCGACCTTCCCAACCCGCCTCCTGGAACACCTGGATCGACCCACGTGACCCCAAGCCCGACCCGCCACCCAACGCCGCCTCCAAGTCCGGCCGCGACGGCGACGGCACCATCACCTCATGGATGGCCCTCAAGGACTTCCCCCCAACTCCACCGCCGCCGTCCAAGCCGTCCAAGCAGTCCCAGCAATCGCCGCCGCTCATCCAGCAGACCATCTCCGCCTCGGTCAACGACAAGTCAACGCCGGAGCAGAGCGACGCCGCGCAGAGGGCCGCCGAGTGGGGATTGGTTCTGAAGACGGACACGGAGACGGGGAGGCCGCAGGGAGTGACCACCCGGAACTCGGGCGGACCCGAAGACCCGAGCCACAAACCGGGTACCTCCAGAAGAAACTCCAACAACTCGGTCCGGAGCTCCGGGGAGTTGTCCGACGACGGCGGCGGCGGAGGAGGAGGAGGGAAAGGGTTTCCGAGAGCTTCGGAGGACTTGAAGAACGTGCTGTCGACGTTTCAGCAGACGTTCGTGGTGTCGGATGCTACCAAACCCGACTACCCGATCATGTACGCCAGCGCCGGGTTTTTCAAGATGACCGGGTACACCTCCAAGGAGGTCATCGGCAGGAACTGCCGGTTTTTGCAGGGAGCGGATACGGACCCGGACGACGTGGCGCAGCTGAGGGAGGCTTTGCAGAAGAACACGAGCTATTGCGGTCGGTTGTTGAATTATAAGAAAGATGGGACCCCTTTTTGGAATTTACTTACTATTGCTCCTATCAAGGACGAAACTGGGAAGGTCCTCAAATTCATTGGAATGCAAGTGGAGGTGAGCAAGCACACTGAGGGGTCCAAGGATAAGATGCTGCGCCCCAATGGATTGCCTGAATCTCTCATTCGATATGATGGTATGGTGCACAGAGCTTGTGCGGAGAGAGAAATCCTCGACATGTTGGATCACCCTTTTCTTCCTGCATTGTATGCTTCGTTTCAGACCAAAACACATGTTTGCCTGATCACTGATTACTACCCTGGTGGAGAACTCTTCCTACTTTTGGACCGCCAACCAACGAAGGTCCTGAAGGAAGATTCAGTGAGATTTTATGTTGCAGAGGTAGTTGTTGCCTTGGAGTATCTTCACTGTCAAGGGATAATTTACAGGGATTTGAAGCCTGAAAATGTTTTACTTCAGAGCAGTGGGCACGTAACCCTGACCGATTTTGATTTATCGTGTTTGACATCTTGCAAACCACAGCTTTTAATTCCTACCATAAACGAAAAGAAAAGGCATCACAAAGGTCAACAGAATCCAATCTTCATGGCTGAACCAATGAGAGCATCAAATTCTTTTGTTGGCACGGAAGAGTACATCGCTCCGGAAATCATAACTGGAGCTGGCCATTCTAGTGCAGTAGACTGGTGGGCTCTTGGTATTCTTATATATGAAATGCTCTATGGATATACACCATTTAGGGGAAAGACAAGGCAAAAGACGTTCGCCAATATTCTTCACAAGGATCTCAAATTTCCAGGAAGTATACCGGCAAGTCTCCCAGCAAAACAGTTAATGTATCGGTTGTTGCATCGTGATCCCAAAAACAGATTGGGGTCTCAGGAAGGGGCAAGCGAAATTAAGCGTCACCCTTTCTTTCGGGGTGTCAACTGGGCTCTAGTTCGCTGCATGAACCCTCCTCAACTCGATGCTCCTCTCTTGGGGACAACTGAAGCTGAAAAGGGTGCTAAGCTTGTGGATCCTGAGATGCAAGATCTACAAACAAATATTTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0007623 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0009657 GO:0009658 GO:0009785 GO:0009881 GO:0009882 GO:0009898 GO:0009902 GO:0009903 GO:0009904 GO:0009986 GO:0009987 GO:0010119 GO:0010155 GO:0010181 GO:0010359 GO:0010360 GO:0010361 GO:0010362 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019750 GO:0022898 GO:0023052 GO:0030522 GO:0032409 GO:0032410 GO:0032412 GO:0032413 GO:0032553 GO:0032879 GO:0034762 GO:0034763 GO:0034765 GO:0034766 GO:0035556 GO:0036094 GO:0036211 GO:0038023 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043271 GO:0043412 GO:0044070 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046777 GO:0048037 GO:0048511 GO:0048519 GO:0050662 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0051716 GO:0060089 GO:0065007 GO:0065009 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0098552 GO:0098562 GO:0104004 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1903792 GO:1903959 GO:1903960 GO:1904062
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAS_9 Pkinase

Protein Analysis

805

Amino Acids

89.41

Weight (kDa)

8.45

Isoelectric Point (pI)

51.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KH_2 PF07650 22 - 73 1.4e-08 KH domain
PAS_9 PF13426 392 - 488 2.4e-20 PAS domain
PAS PF00989 397 - 483 5.3e-08 PAS fold
PAS_3 PF08447 398 - 482 1.8e-07 PAS fold
Pkinase PF00069 517 - 760 1e-52 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 518 - 622 1.6e-13 Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr PF07714 665 - 745 1e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1362
Acc65I GGTACC 1 cut(s) 1013
AccB1I GGYRCC 2 cut(s) 743, 1013
AccBSI CCGCTC 2 cut(s) 835, 1280
AccI GTMKAC 3 cut(s) 1139, 2043, 2167
AccII CGCG 4 cut(s) 387, 579, 732, 899
AccIII TCCGGA 2 cut(s) 1044, 2005
AclWI GGATC 7 cut(s) 386, 680, 1593, 2154, 2213, 2375, 2388
AcoI YGGCCR 2 cut(s) 727, 2026
AcsI RAATTY 6 cut(s) 432, 459, 1387, 1436, 1972, 2153
AcuI CTGAAG 4 cut(s) 950, 1730, 1802, 2373
AcvI CACGTG 1 cut(s) 683
AcyI GRCGYC 1 cut(s) 894
AfaI GTAC 5 cut(s) 242, 1015, 1199, 1232, 1997
AflIII ACRYGT 2 cut(s) 1578, 1633
AgsI TTSAA 6 cut(s) 496, 598, 1126, 1219, 1357, 1798
AjiI CACGTC 1 cut(s) 1300
AjnI CCWGG 4 cut(s) 659, 668, 1660, 2158
Alw21I GWGCWC 3 cut(s) 93, 1052, 1548
Alw26I GTCTC 5 cut(s) 237, 564, 938, 2183, 2244
Alw44I GTGCAC 1 cut(s) 1544
AlwI GGATC 7 cut(s) 386, 680, 1593, 2154, 2213, 2375, 2388
AlwNI CAGNNNCTG 1 cut(s) 1260
Ama87I CYCGRG 2 cut(s) 979, 997
Aor13HI TCCGGA 2 cut(s) 1044, 2005
AoxI GGCC 6 cut(s) 225, 727, 762, 906, 953, 2026
ApaLI GTGCAC 1 cut(s) 1544
ApeKI GCWGC 3 cut(s) 1306, 1495, 2307
ApoI RAATTY 6 cut(s) 432, 459, 1387, 1436, 1972, 2153
ArsI GACNNNNNNTTYG 2 cut(s) 111, 143
Asp718I GGTACC 1 cut(s) 1013
AspLEI GCGC 5 cut(s) 314, 901, 1208, 1306, 1500
AsuC2I CCSGG 6 cut(s) 973, 1011, 1054, 1210, 1228, 1292
AsuHPI GGTGA 6 cut(s) 121, 197, 742, 1471, 1580, 2261
AvaI CYCGRG 2 cut(s) 979, 997
AvaII GGWCC 8 cut(s) 986, 1042, 1288, 1374, 1429, 1479, 1687, 1705
BaeGI GKGCMC 2 cut(s) 1548, 1833
BalI TGGCCA 1 cut(s) 2028
BamHI GGATCC 1 cut(s) 2380
BanI GGYRCC 2 cut(s) 743, 1013
BanII GRGCYC 4 cut(s) 93, 1052, 2056, 2299
BauI CACGAG 1 cut(s) 1333
BbrPI CACGTG 1 cut(s) 683
BbsI GAAGAC 5 cut(s) 370, 528, 586, 938, 999
Bbv12I GWGCWC 3 cut(s) 93, 1052, 1548
BbvCI CCTCAGC 1 cut(s) 1310
BbvI GCAGC 3 cut(s) 1318, 1482, 2294
BccI CCATC 6 cut(s) 95, 754, 755, 857, 1364, 1529
BceAI ACGGC 6 cut(s) 248, 751, 757, 781, 790, 1087
BciT130I CCWGG 4 cut(s) 661, 670, 1662, 2160
BciVI GTATCC 1 cut(s) 1276
BclI TGATCA 1 cut(s) 1644
BcnI CCSGG 6 cut(s) 973, 1011, 1054, 1210, 1228, 1292
BcoDI GTCTC 5 cut(s) 237, 564, 938, 2183, 2244
BfaI CTAG 2 cut(s) 2034, 2300
BfoI RGCGCY 1 cut(s) 1209
BfuI GTATCC 1 cut(s) 1276
BglI GCCNNNNNGGC 1 cut(s) 735
BglII AGATCT 1 cut(s) 2395
BlpI GCTNAGC 1 cut(s) 2370
Bme18I GGWCC 8 cut(s) 986, 1042, 1288, 1374, 1429, 1479, 1687, 1705
BmeT110I CYCGRG 2 cut(s) 979, 997
BmgBI CACGTC 1 cut(s) 1300
BmiI GGNNCC 9 cut(s) 583, 745, 988, 1015, 1290, 1375, 1376, 1480, 2382
BmrI ACTGGG 2 cut(s) 1431, 2302
BmsI GCATC 7 cut(s) 1159, 1482, 1927, 1976, 2221, 2320, 2379
BmuI ACTGGG 2 cut(s) 1431, 2302
BpiI GAAGAC 5 cut(s) 370, 528, 586, 938, 999
BplI GAGNNNNNCTC 4 cut(s) 200, 232, 1557, 1589
BpmI CTGGAG 3 cut(s) 221, 1003, 2040
Bpu10I CCTNAGC 1 cut(s) 1310
Bpu1102I GCTNAGC 1 cut(s) 2370
BpuEI CTTGAG 1 cut(s) 752
BpuMI CCSGG 6 cut(s) 973, 1011, 1054, 1210, 1228, 1292
BsaAI YACGTR 2 cut(s) 683, 1834
BsaHI GRCGYC 1 cut(s) 894
BsaI GGTCTC 1 cut(s) 2244
BsaWI WCCGGW 3 cut(s) 110, 1044, 2005
BsaXI ACNNNNNCTCC 8 cut(s) 348, 378, 590, 620, 701, 731, 1387, 1417
Bse118I RCCGGY 2 cut(s) 1263, 2170
Bse1I ACTGG 5 cut(s) 238, 1426, 2023, 2051, 2297
Bse3DI GCAATG 1 cut(s) 450
BseAI TCCGGA 2 cut(s) 1044, 2005
BseBI CCWGG 4 cut(s) 661, 670, 1662, 2160
BseGI GGATG 5 cut(s) 106, 326, 765, 837, 1174
BseMI GCAATG 1 cut(s) 450
BseMII CTCAG 6 cut(s) 23, 135, 1301, 1464, 2255, 2376
BseNI ACTGG 5 cut(s) 238, 1426, 2023, 2051, 2297
BseRI GAGGAG 8 cut(s) 211, 595, 598, 1098, 1101, 1104, 2310, 2325
BseSI GKGCMC 2 cut(s) 1548, 1833
BseX3I CGGCCG 1 cut(s) 727
BseXI GCAGC 3 cut(s) 1318, 1482, 2294
BseYI CCCAGC 2 cut(s) 819, 2182
BsgI GTGCAG 2 cut(s) 242, 2058
Bsh1236I CGCG 4 cut(s) 387, 579, 732, 899
Bsh1285I CGRYCG 2 cut(s) 730, 1348
BshFI GGCC 6 cut(s) 227, 729, 764, 908, 955, 2028
BshNI GGYRCC 2 cut(s) 743, 1013
BsiEI CGRYCG 2 cut(s) 730, 1348
BsiHKAI GWGCWC 3 cut(s) 93, 1052, 1548
BsiHKCI CYCGRG 2 cut(s) 979, 997
BslFI GGGAC 3 cut(s) 802, 1387, 2359
BsmAI GTCTC 5 cut(s) 237, 564, 938, 2183, 2244
BsmBI CGTCTC 1 cut(s) 938
BsmFI GGGAC 3 cut(s) 802, 1387, 2359
BsmI GAATGC 1 cut(s) 1452
BsnI GGCC 6 cut(s) 227, 729, 764, 908, 955, 2028
Bso31I GGTCTC 1 cut(s) 2244
BsoBI CYCGRG 2 cut(s) 979, 997
Bsp1286I GDGCHC 6 cut(s) 93, 1052, 1548, 1833, 2056, 2299
Bsp13I TCCGGA 2 cut(s) 1044, 2005
Bsp1720I GCTNAGC 1 cut(s) 2370
Bsp19I CCATGG 1 cut(s) 352
Bsp68I TCGCGA 1 cut(s) 387
BspANI GGCC 6 cut(s) 227, 729, 764, 908, 955, 2028
BspCNI CTCAG 6 cut(s) 22, 136, 1302, 1465, 2254, 2377
BspEI TCCGGA 2 cut(s) 1044, 2005
BspFNI CGCG 4 cut(s) 387, 579, 732, 899
BspLI GGNNCC 9 cut(s) 583, 745, 988, 1015, 1290, 1375, 1376, 1480, 2382
BspPI GGATC 7 cut(s) 386, 680, 1593, 2154, 2213, 2375, 2388
BspT107I GGYRCC 2 cut(s) 743, 1013
BspTNI GGTCTC 1 cut(s) 2244
BsrBI CCGCTC 2 cut(s) 835, 1280
BsrDI GCAATG 1 cut(s) 450
BsrFI RCCGGY 2 cut(s) 1263, 2170
BsrI ACTGG 5 cut(s) 238, 1426, 2023, 2051, 2297
BssAI RCCGGY 2 cut(s) 1263, 2170
BssNAI GTATAC 1 cut(s) 2168
BssNI GRCGYC 1 cut(s) 894
BssSI CACGAG 1 cut(s) 1333
BssT1I CCWWGG 6 cut(s) 250, 352, 441, 1239, 1482, 1755
Bst1107I GTATAC 1 cut(s) 2168
Bst2BI CACGAG 1 cut(s) 1333
Bst2UI CCWGG 4 cut(s) 661, 670, 1662, 2160
Bst4CI ACNGT 2 cut(s) 1772, 2193
Bst6I CTCTTC 3 cut(s) 491, 1679, 1986
BstACI GRCGYC 1 cut(s) 894
BstAPI GCANNNNNTGC 3 cut(s) 276, 1260, 1610
BstBAI YACGTR 2 cut(s) 683, 1834
BstDEI CTNAG 7 cut(s) 9, 144, 1310, 1473, 2241, 2370, 2385
BstDSI CCRYGG 2 cut(s) 352, 577
BstEII GGTNACC 1 cut(s) 127
BstF5I GGATG 5 cut(s) 106, 326, 765, 837, 1174
BstFNI CGCG 4 cut(s) 387, 579, 732, 899
BstH2I RGCGCY 1 cut(s) 1209
BstHHI GCGC 5 cut(s) 314, 901, 1208, 1306, 1500
BstMAI GTCTC 5 cut(s) 237, 564, 938, 2183, 2244
BstMCI CGRYCG 2 cut(s) 730, 1348
BstNI CCWGG 4 cut(s) 661, 670, 1662, 2160
BstNSI RCATGY 3 cut(s) 279, 1582, 1637
BstPI GGTNACC 1 cut(s) 127
BstSLI GKGCMC 2 cut(s) 1548, 1833
BstUI CGCG 4 cut(s) 387, 579, 732, 899
BstV1I GCAGC 3 cut(s) 1318, 1482, 2294
BstV2I GAAGAC 5 cut(s) 370, 528, 586, 938, 999
BstX2I RGATCY 3 cut(s) 2146, 2380, 2395
BstYI RGATCY 3 cut(s) 2146, 2380, 2395
BstZ17I GTATAC 1 cut(s) 2168
BstZI CGGCCG 1 cut(s) 727
BsuI GTATCC 1 cut(s) 1276
BsuRI GGCC 6 cut(s) 227, 729, 764, 908, 955, 2028
BtgI CCRYGG 2 cut(s) 352, 577
BtgZI GCGATG 1 cut(s) 1984
BtrI CACGTC 1 cut(s) 1300
BtsCI GGATG 5 cut(s) 106, 326, 765, 837, 1174
BtsI GCAGTG 1 cut(s) 1831
BtsIMutI CAGTG 6 cut(s) 141, 1470, 1647, 1728, 1768, 1831
BtuMI TCGCGA 1 cut(s) 387
CaiI CAGNNNCTG 1 cut(s) 1260
CfoI GCGC 5 cut(s) 314, 901, 1208, 1306, 1500
Cfr10I RCCGGY 2 cut(s) 1263, 2170
Cfr42I CCGCGG 1 cut(s) 580
CpoI CGGWCCG 1 cut(s) 1042
CseI GACGC 2 cut(s) 902, 2255
Csp6I GTAC 5 cut(s) 241, 1014, 1198, 1231, 1996
CspI CGGWCCG 1 cut(s) 1042
CviAII CATG 9 cut(s) 276, 301, 353, 756, 1195, 1579, 1634, 1948, 2311
CviQI GTAC 5 cut(s) 241, 1014, 1198, 1231, 1996
DdeI CTNAG 7 cut(s) 9, 144, 1310, 1473, 2241, 2370, 2385
EaeI YGGCCR 2 cut(s) 727, 2026
EagI CGGCCG 1 cut(s) 727
Eam1104I CTCTTC 3 cut(s) 491, 1679, 1986
EarI CTCTTC 3 cut(s) 491, 1679, 1986
EciI GGCGGA 3 cut(s) 844, 999, 1095
Ecl136II GAGCTC 2 cut(s) 91, 1050
EclXI CGGCCG 1 cut(s) 727
Eco130I CCWWGG 6 cut(s) 250, 352, 441, 1239, 1482, 1755
Eco24I GRGCYC 4 cut(s) 93, 1052, 2056, 2299
Eco31I GGTCTC 1 cut(s) 2244
Eco47I GGWCC 8 cut(s) 986, 1042, 1288, 1374, 1429, 1479, 1687, 1705
Eco52I CGGCCG 1 cut(s) 727
Eco53kI GAGCTC 2 cut(s) 91, 1050
Eco57I CTGAAG 4 cut(s) 950, 1730, 1802, 2373
Eco72I CACGTG 1 cut(s) 683
Eco88I CYCGRG 2 cut(s) 979, 997
Eco91I GGTNACC 1 cut(s) 127
EcoICRI GAGCTC 2 cut(s) 91, 1050
EcoO109I RGGNCCY 3 cut(s) 1374, 1429, 1705
EcoO65I GGTNACC 1 cut(s) 127
EcoRII CCWGG 4 cut(s) 659, 668, 1660, 2158
EcoT14I CCWWGG 6 cut(s) 250, 352, 441, 1239, 1482, 1755
EcoT38I GRGCYC 4 cut(s) 93, 1052, 2056, 2299
ErhI CCWWGG 6 cut(s) 250, 352, 441, 1239, 1482, 1755
Esp3I CGTCTC 1 cut(s) 938
FaeI CATG 9 cut(s) 279, 304, 356, 759, 1198, 1582, 1637, 1951, 2314
FaqI GGGAC 3 cut(s) 802, 1387, 2359
FatI CATG 9 cut(s) 275, 300, 352, 755, 1194, 1578, 1633, 1947, 2310
FauI CCCGC 4 cut(s) 584, 628, 661, 708
FbaI TGATCA 1 cut(s) 1644
FblI GTMKAC 3 cut(s) 1139, 2043, 2167
FokI GGATG 5 cut(s) 113, 333, 772, 824, 1181
FriOI GRGCYC 4 cut(s) 93, 1052, 2056, 2299
FspBI CTAG 2 cut(s) 2034, 2300
GlaI GCGC 5 cut(s) 313, 900, 1207, 1305, 1499
GsaI CCCAGC 2 cut(s) 823, 2186
GsuI CTGGAG 3 cut(s) 221, 1003, 2040
HaeII RGCGCY 1 cut(s) 1209
HaeIII GGCC 6 cut(s) 227, 729, 764, 908, 955, 2028
HgaI GACGC 2 cut(s) 902, 2255
HhaI GCGC 5 cut(s) 314, 901, 1208, 1306, 1500
Hin1I GRCGYC 1 cut(s) 894
Hin1II CATG 9 cut(s) 279, 304, 356, 759, 1198, 1582, 1637, 1951, 2314
Hin6I GCGC 5 cut(s) 312, 899, 1206, 1304, 1498
HinP1I GCGC 5 cut(s) 312, 899, 1206, 1304, 1498
HincII GTYRAC 5 cut(s) 865, 876, 1140, 1931, 2290
HindII GTYRAC 5 cut(s) 865, 876, 1140, 1931, 2290
HindIII AAGCTT 1 cut(s) 2372
HinfI GANTC 7 cut(s) 7, 230, 420, 572, 1517, 1718, 1936
HphI GGTGA 6 cut(s) 121, 197, 742, 1471, 1580, 2261
Hpy166II GTNNAC 9 cut(s) 865, 876, 1140, 1233, 1546, 1931, 2044, 2168, 2290
Hpy188III TCNNGA 9 cut(s) 386, 1020, 1045, 1219, 1708, 2006, 2216, 2243, 2384
Hpy8I GTNNAC 9 cut(s) 865, 876, 1140, 1233, 1546, 1931, 2044, 2168, 2290
HpyAV CCTTC 9 cut(s) 184, 353, 405, 646, 654, 1420, 1696, 1705, 2240
HpyCH4III ACNGT 2 cut(s) 1772, 2193
HpyCH4IV ACGT 7 cut(s) 682, 1131, 1142, 1154, 1299, 1833, 2123
HpyF3I CTNAG 7 cut(s) 9, 144, 1310, 1473, 2241, 2370, 2385
HpySE526I ACGT 7 cut(s) 682, 1131, 1142, 1154, 1299, 1833, 2123
Hsp92I GRCGYC 1 cut(s) 894
Hsp92II CATG 9 cut(s) 279, 304, 356, 759, 1198, 1582, 1637, 1951, 2314
HspAI GCGC 5 cut(s) 312, 899, 1206, 1304, 1498
KflI GGGWCCC 1 cut(s) 1374
Kpn2I TCCGGA 2 cut(s) 1044, 2005
KpnI GGTACC 1 cut(s) 1017
Ksp22I TGATCA 1 cut(s) 1644
KspI CCGCGG 1 cut(s) 580
Lsp1109I GCAGC 3 cut(s) 1318, 1482, 2294
LweI GCATC 7 cut(s) 1159, 1482, 1927, 1976, 2221, 2320, 2379
MaeI CTAG 2 cut(s) 2034, 2300
MaeII ACGT 7 cut(s) 682, 1131, 1142, 1154, 1299, 1833, 2123
MaeIII GTNAC 6 cut(s) 104, 127, 683, 964, 1834, 2267
MbiI CCGCTC 2 cut(s) 835, 1280
MflI RGATCY 3 cut(s) 2146, 2380, 2395
MhlI GDGCHC 6 cut(s) 93, 1052, 1548, 1833, 2056, 2299
MlsI TGGCCA 1 cut(s) 2028
MluNI TGGCCA 1 cut(s) 2028
MlyI GAGTC 2 cut(s) 239, 566
MmeI TCCRAC 6 cut(s) 357, 664, 1056, 1089, 1146, 1563
Mox20I TGGCCA 1 cut(s) 2028
MroI TCCGGA 2 cut(s) 1044, 2005
MscI TGGCCA 1 cut(s) 2028
MseI TTAA 4 cut(s) 437, 1889, 2195, 2262
MslI CAYNNNNRTG 2 cut(s) 1445, 2034
Msp20I TGGCCA 1 cut(s) 2028
MspA1I CMGCKG 2 cut(s) 579, 1309
Mva1269I GAATGC 1 cut(s) 1452
MvaI CCWGG 4 cut(s) 661, 670, 1662, 2160
MvnI CGCG 4 cut(s) 387, 579, 732, 899
NciI CCSGG 6 cut(s) 973, 1011, 1054, 1210, 1228, 1292
NcoI CCATGG 1 cut(s) 352
NlaIII CATG 9 cut(s) 279, 304, 356, 759, 1198, 1582, 1637, 1951, 2314
NlaIV GGNNCC 9 cut(s) 583, 745, 988, 1015, 1290, 1375, 1376, 1480, 2382
NmeAIII GCCGAG 3 cut(s) 121, 253, 937
NmuCI GTSAC 4 cut(s) 127, 683, 964, 2267
NruI TCGCGA 1 cut(s) 387
NspI RCATGY 3 cut(s) 279, 1582, 1637
PaeI GCATGC 1 cut(s) 279
PciI ACATGT 2 cut(s) 1578, 1633
PcsI WCGNNNNNNNCGW 1 cut(s) 531
PctI GAATGC 1 cut(s) 1452
PfeI GAWTC 4 cut(s) 420, 1517, 1718, 1936
PfoI TCCNGGA 2 cut(s) 659, 2158
PleI GAGTC 2 cut(s) 238, 566
PmaCI CACGTG 1 cut(s) 683
PmlI CACGTG 1 cut(s) 683
PpsI GAGTC 2 cut(s) 238, 566
Ppu21I YACGTR 2 cut(s) 683, 1834
PpuMI RGGWCCY 3 cut(s) 1374, 1429, 1705
PscI ACATGT 2 cut(s) 1578, 1633
PsiI TTATAA 1 cut(s) 1362
Psp124BI GAGCTC 2 cut(s) 93, 1052
Psp5II RGGWCCY 3 cut(s) 1374, 1429, 1705
Psp6I CCWGG 4 cut(s) 659, 668, 1660, 2158
PspCI CACGTG 1 cut(s) 683
PspEI GGTNACC 1 cut(s) 127
PspFI CCCAGC 2 cut(s) 819, 2182
PspGI CCWGG 4 cut(s) 659, 668, 1660, 2158
PspN4I GGNNCC 9 cut(s) 583, 745, 988, 1015, 1290, 1375, 1376, 1480, 2382
PspPPI RGGWCCY 3 cut(s) 1374, 1429, 1705
PsrI GAACNNNNNNTAC 2 cut(s) 1662, 1694
PstNI CAGNNNCTG 1 cut(s) 1260
PsuI RGATCY 3 cut(s) 2146, 2380, 2395
PvuII CAGCTG 1 cut(s) 1309
RruI TCGCGA 1 cut(s) 387
RsaI GTAC 5 cut(s) 242, 1015, 1199, 1232, 1997
RsaNI GTAC 5 cut(s) 241, 1014, 1198, 1231, 1996
RseI CAYNNNNRTG 2 cut(s) 1445, 2034
Rsr2I CGGWCCG 1 cut(s) 1042
RsrII CGGWCCG 1 cut(s) 1042
SacI GAGCTC 2 cut(s) 93, 1052
SacII CCGCGG 1 cut(s) 580
SalI GTCGAC 1 cut(s) 1138
SaqAI TTAA 4 cut(s) 437, 1889, 2195, 2262
SchI GAGTC 2 cut(s) 239, 566
SduI GDGCHC 6 cut(s) 93, 1052, 1548, 1833, 2056, 2299
SfaNI GCATC 7 cut(s) 1159, 1482, 1927, 1976, 2221, 2320, 2379
Sfr303I CCGCGG 1 cut(s) 580
SgrBI CCGCGG 1 cut(s) 580
SinI GGWCC 8 cut(s) 986, 1042, 1288, 1374, 1429, 1479, 1687, 1705
SmiMI CAYNNNNRTG 2 cut(s) 1445, 2034
SmlI CTYRAG 1 cut(s) 767
SmoI CTYRAG 1 cut(s) 767
SphI GCATGC 1 cut(s) 279
SspI AATATT 3 cut(s) 492, 2134, 2410
SspMI CTAG 2 cut(s) 2034, 2300
SstI GAGCTC 2 cut(s) 93, 1052
StyI CCWWGG 6 cut(s) 250, 352, 441, 1239, 1482, 1755
TaaI ACNGT 2 cut(s) 1772, 2193
TaiI ACGT 7 cut(s) 685, 1134, 1145, 1157, 1302, 1836, 2126
TaqI TCGA 8 cut(s) 117, 588, 611, 675, 1139, 1528, 1575, 2328
TaqII GACCGA 3 cut(s) 850, 1030, 1859
TatI WGTACW 2 cut(s) 240, 1995
TfiI GAWTC 4 cut(s) 420, 1517, 1718, 1936
Tru1I TTAA 4 cut(s) 437, 1889, 2195, 2262
Tru9I TTAA 4 cut(s) 437, 1889, 2195, 2262
TscAI CASTG 6 cut(s) 148, 1477, 1654, 1728, 1775, 1831
TseFI GTSAC 4 cut(s) 127, 683, 964, 2267
TseI GCWGC 3 cut(s) 1306, 1495, 2307
Tsp45I GTSAC 4 cut(s) 127, 683, 964, 2267
TspDTI ATGAA 7 cut(s) 370, 387, 387, 1429, 1936, 2088, 2327
TspGWI ACGGA 5 cut(s) 63, 950, 956, 1301, 2003
TspRI CASTG 6 cut(s) 148, 1477, 1654, 1728, 1775, 1831
VneI GTGCAC 1 cut(s) 1544
VpaK11BI GGWCC 8 cut(s) 986, 1042, 1288, 1374, 1429, 1479, 1687, 1705
XapI RAATTY 6 cut(s) 432, 459, 1387, 1436, 1972, 2153
XceI RCATGY 3 cut(s) 279, 1582, 1637
XcmI CCANNNNNNNNNTGG 1 cut(s) 2230
XmiI GTMKAC 3 cut(s) 1139, 2043, 2167
XspI CTAG 2 cut(s) 2034, 2300
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.