Prupe.6G089800_v2.0.a1

PAS fold

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0004648
Physical Location & Seq
Reverse (-)
6145009 .. 6156611
11603 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G089800.8

Sequence Viewer

Length: 3024 bp
ATGGAAGACGAACCAGACACAACGCCACCCTCTCTCATCCCACCATTCCCAAGAGACTCACGCGGCTCCCTCGAAGTCTTCAACCCCTCCTCCTCCTCCACCTTCTCCACTTCCACCTCACCTTTCCGCTCCCAACACACGTGGCAAAGCTGGATAGACCCACTTGGTGGCACCACCCTCGAACCCGAGACGGTACCCAAACTCACCTCCAAGTCCACCCGAGCCGACGACATCACCACCTCATGGTTGGCCCTCAAGGACGACGACGCCCCCCCAACAGCCCCATCTCCACCGTCCATTCACCACACAATCTCCGCCGTCGACGGGAACGACAAGTCGTCCGCTCCCTCCGACGACGCTGCGCAGAGAGCCGCGGAGTGGGGGCTGGTGCTGAAGACGGACACCGAGACGGGGAGGCTGCAAGGGGTGAGCGCTCGGACCTCGGGAGGACCCGAAGACCCGAATCCCAAACCGGGTCAGAGCGCCGCCGCTTCTTCTAGAAGGACATCGAACAATTCGGTTCAGAGCTCCGGCGAGTTCTCTTCGGACGACGTCTTCGGAGGGAAAGAGAGAGGGATACCGAGAGCTTCGAACGATTTGAAAGACGCGCTGTCGACGTTTCAGCAGACGTTCGTGGTTTCGGACGCTACCAAACCCGATTACCCGATTATGTACGCCAGCGCCGGGTTTTTCAAAATGACCGGGTACACTTCCAAAGAGGTTATCGGCAGAAACTGCCGGTTTTTACAAGGAGCGGGCACGGACCCGGAAGACGTGGCGCAGATAAGGGAGGCTTTGGAAAGGAACACGAGTTACTGTGGGAGGCTACTGAATTATAAGAAAGATGGGACCCCTTTTTGGAATTTACTCACTATTGCCCCCATAAAGGACGAGACTGGGAAAGTTCTCAAATTCATTGGAATGCAAGTGGAGGTGAGCAAGCATACTGAGGGGTCCAAGGATAAGATGCTGCGTCCCAATGGATTGCCTGAGTCTTTGATTCGATATGATGCTCGTCAGAAAGAAATGGCTTCAAATTCAGTATCTGAACTAGTGCAGGCAGTGAAAAGACCCCGGTCACTTAGTGAGTCAATGAATCACCCCTTGTTTAGAAAGTCAGGAGGTGGCCGGACAGAGGAGAGAACAGAAGTGCTAGCGAGGAGAAACTCAGAGAGTGTGGCTCCACCTAGACGGAATTCACGTGGGGATCATCCTAAAATCTCAATGCAGCGTATCAGCGAGTTGCCTGAAAAGAAACAGAAAAAAACTAGCCGACTTTCTTTCATGGGGAGGATTAGGAAAAGTCAAACCATTGAGGAAAGCTTTGACACTGGAGTTCCTGTGGATACCTATGAGAGTGAAAATGATGAGGAGAGACCTGACAGTCTTGATGACAAAGTAAGACAAAAGGAAATGAGGAAGGGTATTGATCTCGCCACAACACTGGAACGTATAGAGAAAAACTTCGTCATTACTGATCCGAGGCTGCCTGATAATCCCATTATATTTGCATCTGACAGCTTCTTGGAGCTTACAGAGTACAGTCGCGAAGAAATATTAGGAAGAAACTGCAGGTTCCTGCAAGGACCTGAGACTGATCCAGCAACTGTGAGGAAAATAAGAGATGCAATTGACAACCAGACTGAAGTTACTGTACAGCTCATCAATTATACGAAAAGTGGTAAAAAGTTCTGGAACGTGTTTCATCTGCAGCCTATGCGTGATCAAAAGGGGGAAGTTCAATATTTTATTGGGGTACAACTAGATGGCAGTGAGCACATTGAGCCTGTGAACAACTCTATTCCTGAAGATACCGTAAAAGAGAGTGAAAAACTGGTCAGAGCAACTGCAGAAAATGTTGACGACGCAGCGAGAGAACTTCCTGATGCAAATATGAAACCAGAAGATCTGTGGATGAACCATTCAAAGGTTGTTCACCCAAAGCCTCATAGAAAGAATAGCCCCTCTTGGAGAGCCATCGAAAAGATTCTAGTTAGTGGAGAGCAGATAGGATTGAAACATTTTAGGCCTATAAAGCCCTTGGGATCTGGTGATACTGGCAGTGTACATTTGGTGGAACTCTGTGGAACTGGCCACTACTTCGCAATGAAGGCTATGGATAAGGGCGTCATGCTCAATCGTAACAAGGTGCACAGAGCTTGTGCAGAGAGAGAGATCCTCGACGTGTTGGATCACCCTTTTCTTCCTGCATTGTATGCTTCATTTCAGACCAAAACACATGTTTGCCTGATTACTGATTACTACCCTGGTGGAGAACTCTTCGTGCTTTTGGATAGACAACCCACGAAGGTCCTTAAGGAAGATTCTGTGAGATTTTATGTTGCAGAGGTAGTTGTTGCATTGGAGTATCTTCACTGTTTGGGTATAATTTACAGGGATTTGAAGCCTGAAAATGTTTTAATTCAGAGCAATGGGCATGTTTCCCTGACAGATTTTGATTTATCCTGTTTAACATCTTGCAAACCGCAGCTTTTACTCCCAAGCATAAACGAAAAGAAAAAACAACATAAAGGTCAACAGAATCCAATCTTCATGGCTGAACCAATGAGAGCATCAAATTCCTTTGTTGGCACTGAAGAGTACATAGCTCCGGAAATCATAACTGGAGCAGGCCATACTAGTGCAGTGGACTGGTGGGCTCTTGGTATTCTTATCTATGAAATGCTCTATGGCTATACACCATTCAGGGGGAAAACAAGGCAAAAGACATTTGCCAACATTCTTCACAAGGATCTTAAGTTTCCAGGAAGTATATCGGCAAGTCTTCAAGCAAAGCAGTTAATGTATCGGTTGTTGCACCGCGATCCCAAAAATAGACTGGGCTCACAGGAAGGAGCAAATGAAATTAAGCGCCACCCCTTCTTCAAGGGTGTCAACTGGGCTCTCGTTCGCTGCATGAAACCTCCTCAACTCGATGTGCCTCTCTTTGCAAAAACTGAAGCCGAAAAGGAAGCAAATGCTGTGGATCCTGAGATGCAAGATTTACAGACAAACATTTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0007623 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0009657 GO:0009658 GO:0009785 GO:0009881 GO:0009882 GO:0009898 GO:0009902 GO:0009903 GO:0009904 GO:0009986 GO:0009987 GO:0010119 GO:0010155 GO:0010181 GO:0010359 GO:0010360 GO:0010361 GO:0010362 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019750 GO:0022898 GO:0023052 GO:0030522 GO:0032409 GO:0032410 GO:0032412 GO:0032413 GO:0032553 GO:0032879 GO:0034762 GO:0034763 GO:0034765 GO:0034766 GO:0035556 GO:0036094 GO:0036211 GO:0038023 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043271 GO:0043412 GO:0044070 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046777 GO:0048037 GO:0048511 GO:0048519 GO:0050662 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0051716 GO:0060089 GO:0065007 GO:0065009 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0098552 GO:0098562 GO:0104004 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1903792 GO:1903959 GO:1903960 GO:1904062
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAS_9 Pkinase

Protein Analysis

1008

Amino Acids

112.8

Weight (kDa)

6.6

Isoelectric Point (pI)

43.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 837
AasI GACNNNNNNGTC 1 cut(s) 1383
AatII GACGTC 1 cut(s) 555
Acc16I TGCGCA 1 cut(s) 363
Acc36I ACCTGC 1 cut(s) 1563
Acc65I GGTACC 1 cut(s) 193
AccB1I GGYRCC 2 cut(s) 170, 193
AccB7I CCANNNNNTGG 2 cut(s) 167, 243
AccBSI CCGCTC 3 cut(s) 129, 344, 755
AccI GTMKAC 2 cut(s) 321, 614
AccII CGCG 5 cut(s) 63, 374, 608, 1548, 2823
AccIII TCCGGA 1 cut(s) 2611
AcoI YGGCCR 2 cut(s) 1126, 2092
AcsI RAATTY 5 cut(s) 862, 911, 1036, 1195, 2578
AcuI CTGAAG 5 cut(s) 413, 1665, 1827, 2616, 2979
AcvI CACGTG 2 cut(s) 141, 1202
AcyI GRCGYC 3 cut(s) 267, 552, 2127
AdeI CACNNNGTG 2 cut(s) 167, 1085
AfaI GTAC 8 cut(s) 195, 674, 707, 1541, 1656, 1758, 2067, 2603
AfeI AGCGCT 1 cut(s) 433
AflII CTTAAG 2 cut(s) 2315, 2756
AflIII ACRYGT 4 cut(s) 138, 1698, 2184, 2239
AhdI GACNNNNNGTC 2 cut(s) 337, 610
AhlI ACTAGT 2 cut(s) 1051, 2639
AjiI CACGTC 2 cut(s) 775, 2185
AjnI CCWGG 2 cut(s) 2266, 2764
Alw21I GWGCWC 3 cut(s) 530, 1779, 2154
Alw26I GTCTC 6 cut(s) 48, 182, 401, 887, 1369, 1586
Alw44I GTGCAC 1 cut(s) 2150
AlwNI CAGNNNCTG 3 cut(s) 735, 1046, 1607
Ama87I CYCGRG 3 cut(s) 185, 219, 442
Aor13HI TCCGGA 1 cut(s) 2611
Aor51HI AGCGCT 1 cut(s) 433
AoxI GGCC 5 cut(s) 249, 1126, 2027, 2092, 2632
ApaLI GTGCAC 1 cut(s) 2150
ApeKI GCWGC 9 cut(s) 359, 418, 970, 1228, 1486, 1711, 1868, 2488, 2913
ApoI RAATTY 5 cut(s) 862, 911, 1036, 1195, 2578
ArsI GACNNNNNNTTYG 2 cut(s) 539, 571
Asp700I GAANNNNTTC 2 cut(s) 1463, 1986
Asp718I GGTACC 1 cut(s) 193
AspLEI GCGC 7 cut(s) 364, 434, 485, 610, 683, 781, 2874
AspS9I GGNCC 8 cut(s) 250, 438, 449, 763, 849, 954, 1586, 2311
AsuC2I CCSGG 5 cut(s) 474, 685, 703, 767, 1075
AsuII TTCGAA 1 cut(s) 590
AsuNHI GCTAGC 1 cut(s) 1153
AvaI CYCGRG 3 cut(s) 185, 219, 442
AvaII GGWCC 7 cut(s) 438, 449, 763, 849, 954, 1586, 2311
BaeGI GKGCMC 2 cut(s) 761, 2154
BalI TGGCCA 1 cut(s) 2094
BamHI GGATCC 1 cut(s) 2986
BanI GGYRCC 2 cut(s) 170, 193
BanII GRGCYC 4 cut(s) 530, 2662, 2846, 2905
BarI GAAGNNNNNNTAC 2 cut(s) 1638, 1670
BauI CACGAG 1 cut(s) 808
BbrPI CACGTG 2 cut(s) 141, 1202
BbsI GAAGAC 7 cut(s) 12, 70, 401, 462, 547, 777, 2777
Bbv12I GWGCWC 3 cut(s) 530, 1779, 2154
BbvI GCAGC 9 cut(s) 346, 405, 957, 1240, 1473, 1723, 1880, 2500, 2900
BccI CCATC 4 cut(s) 292, 839, 1760, 1985
BceAI ACGGC 1 cut(s) 302
BcgI CGANNNNNNTGC 4 cut(s) 160, 194, 341, 375
BciT130I CCWGG 2 cut(s) 2268, 2766
BciVI GTATCC 2 cut(s) 570, 1339
BclI TGATCA 1 cut(s) 1723
BcnI CCSGG 5 cut(s) 474, 685, 703, 767, 1075
BcoDI GTCTC 6 cut(s) 48, 182, 401, 887, 1369, 1586
BcuI ACTAGT 2 cut(s) 1051, 2639
BfaI CTAG 8 cut(s) 498, 1052, 1154, 1188, 1269, 1763, 1991, 2640
BfmI CTRYAG 3 cut(s) 1570, 1709, 1848
BfoI RGCGCY 4 cut(s) 435, 486, 684, 2875
BfrI CTTAAG 2 cut(s) 2315, 2756
BfuAI ACCTGC 1 cut(s) 1563
BfuI GTATCC 2 cut(s) 570, 1339
BglII AGATCT 1 cut(s) 1906
Bme1390I CCNGG 7 cut(s) 474, 685, 703, 767, 1075, 2268, 2766
Bme18I GGWCC 7 cut(s) 438, 449, 763, 849, 954, 1586, 2311
BmeRI GACNNNNNGTC 2 cut(s) 337, 610
BmeT110I CYCGRG 3 cut(s) 185, 219, 442
BmgBI CACGTC 2 cut(s) 775, 2185
BmgT120I GGNCC 8 cut(s) 250, 438, 449, 763, 849, 954, 1586, 2311
BmrFI CCNGG 7 cut(s) 474, 685, 703, 767, 1075, 2268, 2766
BmrI ACTGGG 3 cut(s) 906, 2849, 2908
BmsI GCATC 7 cut(s) 957, 1000, 1520, 1615, 1876, 2582, 2985
BmtI GCTAGC 1 cut(s) 1157
BmuI ACTGGG 3 cut(s) 906, 2849, 2908
BoxI GACNNNNGTC 1 cut(s) 1075
BpiI GAAGAC 7 cut(s) 12, 70, 401, 462, 547, 777, 2777
BplI GAGNNNNNCTC 4 cut(s) 1165, 1197, 2163, 2195
BpmI CTGGAG 2 cut(s) 1353, 2646
Bpu14I TTCGAA 1 cut(s) 590
BpuEI CTTGAG 1 cut(s) 239
BpuMI CCSGG 5 cut(s) 474, 685, 703, 767, 1075
BsaAI YACGTR 2 cut(s) 141, 1202
BsaHI GRCGYC 3 cut(s) 267, 552, 2127
BsaI GGTCTC 1 cut(s) 1369
BsaJI CCNNGG 7 cut(s) 372, 441, 957, 1073, 1481, 2040, 2266
BsaWI WCCGGW 1 cut(s) 2611
BsaXI ACNNNNNCTCC 6 cut(s) 74, 104, 296, 326, 1326, 1356
Bse118I RCCGGY 1 cut(s) 738
Bse3DI GCAATG 2 cut(s) 2112, 2437
BseAI TCCGGA 1 cut(s) 2611
BseBI CCWGG 2 cut(s) 2268, 2766
BseDI CCNNGG 7 cut(s) 372, 441, 957, 1073, 1481, 2040, 2266
BseGI GGATG 3 cut(s) 36, 1210, 1920
BseMI GCAATG 2 cut(s) 2112, 2437
BseMII CTCAG 5 cut(s) 939, 981, 1182, 1581, 2982
BseRI GAGGAG 7 cut(s) 79, 82, 85, 1151, 1174, 1385, 2916
BseSI GKGCMC 2 cut(s) 761, 2154
BseXI GCAGC 9 cut(s) 346, 405, 957, 1240, 1473, 1723, 1880, 2500, 2900
BsgI GTGCAG 3 cut(s) 1076, 2184, 2664
Bsh1236I CGCG 5 cut(s) 63, 374, 608, 1548, 2823
BshFI GGCC 5 cut(s) 251, 1128, 2029, 2094, 2634
BshNI GGYRCC 2 cut(s) 170, 193
BsiHKAI GWGCWC 3 cut(s) 530, 1779, 2154
BsiHKCI CYCGRG 3 cut(s) 185, 219, 442
BsiSI CCGG 9 cut(s) 473, 531, 684, 702, 739, 767, 1075, 1129, 2612
BslFI GGGAC 2 cut(s) 862, 960
BsmAI GTCTC 6 cut(s) 48, 182, 401, 887, 1369, 1586
BsmBI CGTCTC 2 cut(s) 182, 401
BsmFI GGGAC 2 cut(s) 862, 960
BsmI GAATGC 1 cut(s) 927
BsnI GGCC 5 cut(s) 251, 1128, 2029, 2094, 2634
Bso31I GGTCTC 1 cut(s) 1369
BsoBI CYCGRG 3 cut(s) 185, 219, 442
Bsp119I TTCGAA 1 cut(s) 590
Bsp1286I GDGCHC 7 cut(s) 530, 761, 1779, 2154, 2662, 2846, 2905
Bsp13I TCCGGA 1 cut(s) 2611
Bsp1407I TGTACA 2 cut(s) 1654, 2065
Bsp68I TCGCGA 1 cut(s) 1548
BspANI GGCC 5 cut(s) 251, 1128, 2029, 2094, 2634
BspCNI CTCAG 5 cut(s) 940, 982, 1181, 1582, 2983
BspEI TCCGGA 1 cut(s) 2611
BspFNI CGCG 5 cut(s) 63, 374, 608, 1548, 2823
BspMAI CTGCAG 3 cut(s) 1574, 1713, 1852
BspMI ACCTGC 1 cut(s) 1563
BspOI GCTAGC 1 cut(s) 1157
BspT104I TTCGAA 1 cut(s) 590
BspT107I GGYRCC 2 cut(s) 170, 193
BspTI CTTAAG 2 cut(s) 2315, 2756
BspTNI GGTCTC 1 cut(s) 1369
BsrBI CCGCTC 3 cut(s) 129, 344, 755
BsrDI GCAATG 2 cut(s) 2112, 2437
BsrFI RCCGGY 1 cut(s) 738
BsrGI TGTACA 2 cut(s) 1654, 2065
BssAI RCCGGY 1 cut(s) 738
BssECI CCNNGG 7 cut(s) 372, 441, 957, 1073, 1481, 2040, 2266
BssNI GRCGYC 3 cut(s) 267, 552, 2127
BssSI CACGAG 1 cut(s) 808
BssT1I CCWWGG 2 cut(s) 957, 2040
Bst2BI CACGAG 1 cut(s) 808
Bst2UI CCWGG 2 cut(s) 2268, 2766
Bst4CI ACNGT 9 cut(s) 193, 294, 818, 1385, 1544, 1609, 1654, 1816, 2378
Bst6I CTCTTC 3 cut(s) 547, 2285, 2592
BstACI GRCGYC 3 cut(s) 267, 552, 2127
BstAFI CTTAAG 2 cut(s) 2315, 2756
BstAPI GCANNNNNTGC 3 cut(s) 735, 1717, 2216
BstAUI TGTACA 2 cut(s) 1654, 2065
BstBAI YACGTR 2 cut(s) 141, 1202
BstBI TTCGAA 1 cut(s) 590
BstC8I GCNNGC 6 cut(s) 679, 757, 941, 1059, 1155, 2632
BstDEI CTNAG 6 cut(s) 948, 990, 1082, 1168, 1590, 2991
BstDSI CCRYGG 1 cut(s) 372
BstF5I GGATG 3 cut(s) 36, 1210, 1920
BstFNI CGCG 5 cut(s) 63, 374, 608, 1548, 2823
BstH2I RGCGCY 4 cut(s) 435, 486, 684, 2875
BstHHI GCGC 7 cut(s) 364, 434, 485, 610, 683, 781, 2874
BstMAI GTCTC 6 cut(s) 48, 182, 401, 887, 1369, 1586
BstMWI GCNNNNNNNGC 7 cut(s) 368, 735, 1717, 1783, 2035, 2111, 2216
BstNI CCWGG 2 cut(s) 2268, 2766
BstNSI RCATGY 2 cut(s) 2243, 2441
BstPAI GACNNNNGTC 1 cut(s) 1075
BstSCI CCNGG 7 cut(s) 472, 683, 701, 765, 1073, 2266, 2764
BstSFI CTRYAG 3 cut(s) 1570, 1709, 1848
BstSLI GKGCMC 2 cut(s) 761, 2154
BstUI CGCG 5 cut(s) 63, 374, 608, 1548, 2823
BstV1I GCAGC 9 cut(s) 346, 405, 957, 1240, 1473, 1723, 1880, 2500, 2900
BstV2I GAAGAC 7 cut(s) 12, 70, 401, 462, 547, 777, 2777
BstX2I RGATCY 5 cut(s) 1906, 2045, 2175, 2752, 2986
BstXI CCANNNNNNTGG 1 cut(s) 1444
BstYI RGATCY 5 cut(s) 1906, 2045, 2175, 2752, 2986
BsuI GTATCC 2 cut(s) 570, 1339
BsuRI GGCC 5 cut(s) 251, 1128, 2029, 2094, 2634
BtgI CCRYGG 1 cut(s) 372
BtrI CACGTC 2 cut(s) 775, 2185
BtsCI GGATG 3 cut(s) 36, 1210, 1920
BtsI GCAGTG 4 cut(s) 1068, 1777, 2068, 2652
BtsIMutI CAGTG 8 cut(s) 1068, 1329, 1442, 1777, 2068, 2374, 2592, 2652
BtuMI TCGCGA 1 cut(s) 1548
BveI ACCTGC 1 cut(s) 1563
Cac8I GCNNGC 6 cut(s) 679, 757, 941, 1059, 1155, 2632
CaiI CAGNNNCTG 3 cut(s) 735, 1046, 1607
CfoI GCGC 7 cut(s) 364, 434, 485, 610, 683, 781, 2874
Cfr10I RCCGGY 1 cut(s) 738
Cfr13I GGNCC 8 cut(s) 250, 438, 449, 763, 849, 954, 1586, 2311
Cfr42I CCGCGG 1 cut(s) 375
CseI GACGC 7 cut(s) 275, 365, 614, 653, 962, 1874, 2116
Csp6I GTAC 8 cut(s) 194, 673, 706, 1540, 1655, 1757, 2066, 2602
CspCI CAANNNNNGTGG 4 cut(s) 122, 157, 2964, 2999
CviAII CATG 7 cut(s) 243, 1285, 2131, 2240, 2438, 2554, 2917
CviQI GTAC 8 cut(s) 194, 673, 706, 1540, 1655, 1757, 2066, 2602
DdeI CTNAG 6 cut(s) 948, 990, 1082, 1168, 1590, 2991
DraIII CACNNNGTG 2 cut(s) 167, 1085
DrdI GACNNNNNNGTC 1 cut(s) 1383
DriI GACNNNNNGTC 2 cut(s) 337, 610
DseDI GACNNNNNNGTC 1 cut(s) 1383
EaeI YGGCCR 2 cut(s) 1126, 2092
Eam1104I CTCTTC 3 cut(s) 547, 2285, 2592
Eam1105I GACNNNNNGTC 2 cut(s) 337, 610
EarI CTCTTC 3 cut(s) 547, 2285, 2592
EciI GGCGGA 1 cut(s) 304
Ecl136II GAGCTC 1 cut(s) 528
Eco130I CCWWGG 2 cut(s) 957, 2040
Eco147I AGGCCT 1 cut(s) 2029
Eco24I GRGCYC 4 cut(s) 530, 2662, 2846, 2905
Eco31I GGTCTC 1 cut(s) 1369
Eco47I GGWCC 7 cut(s) 438, 449, 763, 849, 954, 1586, 2311
Eco47III AGCGCT 1 cut(s) 433
Eco53kI GAGCTC 1 cut(s) 528
Eco57I CTGAAG 5 cut(s) 413, 1665, 1827, 2616, 2979
Eco72I CACGTG 2 cut(s) 141, 1202
Eco88I CYCGRG 3 cut(s) 185, 219, 442
EcoICRI GAGCTC 1 cut(s) 528
EcoO109I RGGNCCY 4 cut(s) 449, 849, 1586, 2311
EcoRI GAATTC 1 cut(s) 1195
EcoRII CCWGG 2 cut(s) 2266, 2764
EcoT14I CCWWGG 2 cut(s) 957, 2040
EcoT38I GRGCYC 4 cut(s) 530, 2662, 2846, 2905
ErhI CCWWGG 2 cut(s) 957, 2040
Esp3I CGTCTC 2 cut(s) 182, 401
FaeI CATG 7 cut(s) 246, 1288, 2134, 2243, 2441, 2557, 2920
FalI AAGNNNNNCTT 2 cut(s) 778, 810
FaqI GGGAC 2 cut(s) 862, 960
FatI CATG 7 cut(s) 242, 1284, 2130, 2239, 2437, 2553, 2916
FauI CCCGC 1 cut(s) 748
FbaI TGATCA 1 cut(s) 1723
FblI GTMKAC 2 cut(s) 321, 614
FokI GGATG 3 cut(s) 23, 1197, 1927
FriOI GRGCYC 4 cut(s) 530, 2662, 2846, 2905
FspBI CTAG 8 cut(s) 498, 1052, 1154, 1188, 1269, 1763, 1991, 2640
FspI TGCGCA 1 cut(s) 363
GlaI GCGC 7 cut(s) 363, 433, 484, 609, 682, 780, 2873
GsuI CTGGAG 2 cut(s) 1353, 2646
HaeII RGCGCY 4 cut(s) 435, 486, 684, 2875
HaeIII GGCC 5 cut(s) 251, 1128, 2029, 2094, 2634
HapII CCGG 9 cut(s) 473, 531, 684, 702, 739, 767, 1075, 1129, 2612
HgaI GACGC 7 cut(s) 275, 365, 614, 653, 962, 1874, 2116
HhaI GCGC 7 cut(s) 364, 434, 485, 610, 683, 781, 2874
Hin1I GRCGYC 3 cut(s) 267, 552, 2127
Hin1II CATG 7 cut(s) 246, 1288, 2134, 2243, 2441, 2557, 2920
Hin6I GCGC 7 cut(s) 362, 432, 483, 608, 681, 779, 2872
HinP1I GCGC 7 cut(s) 362, 432, 483, 608, 681, 779, 2872
HincII GTYRAC 5 cut(s) 322, 615, 1861, 2537, 2896
HindII GTYRAC 5 cut(s) 322, 615, 1861, 2537, 2896
HindIII AAGCTT 1 cut(s) 1321
HinfI GANTC 9 cut(s) 56, 463, 992, 1000, 1088, 1096, 1987, 2324, 2542
HpaII CCGG 9 cut(s) 473, 531, 684, 702, 739, 767, 1075, 1129, 2612
HpyAV CCTTC 7 cut(s) 112, 495, 1414, 2104, 2302, 2846, 2890
HpyCH4III ACNGT 9 cut(s) 193, 294, 818, 1385, 1544, 1609, 1654, 1816, 2378
HpyCH4IV ACGT 9 cut(s) 140, 552, 617, 629, 774, 1201, 1450, 1698, 2184
HpyF10VI GCNNNNNNNGC 7 cut(s) 368, 735, 1717, 1783, 2035, 2111, 2216
HpyF3I CTNAG 6 cut(s) 948, 990, 1082, 1168, 1590, 2991
HpySE526I ACGT 9 cut(s) 140, 552, 617, 629, 774, 1201, 1450, 1698, 2184
Hsp92I GRCGYC 3 cut(s) 267, 552, 2127
Hsp92II CATG 7 cut(s) 246, 1288, 2134, 2243, 2441, 2557, 2920
HspAI GCGC 7 cut(s) 362, 432, 483, 608, 681, 779, 2872
KflI GGGWCCC 1 cut(s) 849
Kpn2I TCCGGA 1 cut(s) 2611
KpnI GGTACC 1 cut(s) 197
Ksp22I TGATCA 1 cut(s) 1723
KspI CCGCGG 1 cut(s) 375
Lsp1109I GCAGC 9 cut(s) 346, 405, 957, 1240, 1473, 1723, 1880, 2500, 2900
LweI GCATC 7 cut(s) 957, 1000, 1520, 1615, 1876, 2582, 2985
MaeI CTAG 8 cut(s) 498, 1052, 1154, 1188, 1269, 1763, 1991, 2640
MaeII ACGT 9 cut(s) 140, 552, 617, 629, 774, 1201, 1450, 1698, 2184
MaeIII GTNAC 4 cut(s) 812, 1077, 1648, 2141
MbiI CCGCTC 3 cut(s) 129, 344, 755
MfeI CAATTG 1 cut(s) 1629
MflI RGATCY 5 cut(s) 1906, 2045, 2175, 2752, 2986
MhlI GDGCHC 7 cut(s) 530, 761, 1779, 2154, 2662, 2846, 2905
MlsI TGGCCA 1 cut(s) 2094
MluNI TGGCCA 1 cut(s) 2094
MlyI GAGTC 3 cut(s) 50, 1001, 1097
MmeI TCCRAC 2 cut(s) 375, 2169
Mox20I TGGCCA 1 cut(s) 2094
MroI TCCGGA 1 cut(s) 2611
MroXI GAANNNNTTC 2 cut(s) 1463, 1986
MscI TGGCCA 1 cut(s) 2094
MseI TTAA 6 cut(s) 2316, 2420, 2471, 2757, 2801, 2868
MslI CAYNNNNRTG 2 cut(s) 920, 2640
Msp20I TGGCCA 1 cut(s) 2094
MspA1I CMGCKG 1 cut(s) 374
MspCI CTTAAG 2 cut(s) 2315, 2756
MspI CCGG 9 cut(s) 473, 531, 684, 702, 739, 767, 1075, 1129, 2612
MspR9I CCNGG 7 cut(s) 474, 685, 703, 767, 1075, 2268, 2766
MunI CAATTG 1 cut(s) 1629
Mva1269I GAATGC 1 cut(s) 927
MvaI CCWGG 2 cut(s) 2268, 2766
MvnI CGCG 5 cut(s) 63, 374, 608, 1548, 2823
MwoI GCNNNNNNNGC 7 cut(s) 368, 735, 1717, 1783, 2035, 2111, 2216
NciI CCSGG 5 cut(s) 474, 685, 703, 767, 1075
NheI GCTAGC 1 cut(s) 1153
NlaIII CATG 7 cut(s) 246, 1288, 2134, 2243, 2441, 2557, 2920
NmuCI GTSAC 1 cut(s) 1077
NruI TCGCGA 1 cut(s) 1548
NsbI TGCGCA 1 cut(s) 363
NspI RCATGY 2 cut(s) 2243, 2441
NspV TTCGAA 1 cut(s) 590
PceI AGGCCT 1 cut(s) 2029
PciI ACATGT 1 cut(s) 2239
PcsI WCGNNNNNNNCGW 2 cut(s) 327, 1198
PctI GAATGC 1 cut(s) 927
PdmI GAANNNNTTC 2 cut(s) 1463, 1986
PfeI GAWTC 6 cut(s) 463, 1000, 1096, 1987, 2324, 2542
PflFI GACNNNGTC 1 cut(s) 551
PflMI CCANNNNNTGG 2 cut(s) 167, 243
PfoI TCCNGGA 1 cut(s) 2764
PleI GAGTC 3 cut(s) 50, 1000, 1096
PmaCI CACGTG 2 cut(s) 141, 1202
PmlI CACGTG 2 cut(s) 141, 1202
PpsI GAGTC 3 cut(s) 50, 1000, 1096
Ppu21I YACGTR 2 cut(s) 141, 1202
PpuMI RGGWCCY 4 cut(s) 449, 849, 1586, 2311
PscI ACATGT 1 cut(s) 2239
PshAI GACNNNNGTC 1 cut(s) 1075
PsiI TTATAA 1 cut(s) 837
Psp124BI GAGCTC 1 cut(s) 530
Psp5II RGGWCCY 4 cut(s) 449, 849, 1586, 2311
Psp6I CCWGG 2 cut(s) 2266, 2764
PspCI CACGTG 2 cut(s) 141, 1202
PspGI CCWGG 2 cut(s) 2266, 2764
PspPI GGNCC 8 cut(s) 250, 438, 449, 763, 849, 954, 1586, 2311
PspPPI RGGWCCY 4 cut(s) 449, 849, 1586, 2311
PsrI GAACNNNNNNTAC 2 cut(s) 797, 829
PstI CTGCAG 3 cut(s) 1574, 1713, 1852
PstNI CAGNNNCTG 3 cut(s) 735, 1046, 1607
PsuI RGATCY 5 cut(s) 1906, 2045, 2175, 2752, 2986
PsyI GACNNNGTC 1 cut(s) 551
RruI TCGCGA 1 cut(s) 1548
RsaI GTAC 8 cut(s) 195, 674, 707, 1541, 1656, 1758, 2067, 2603
RsaNI GTAC 8 cut(s) 194, 673, 706, 1540, 1655, 1757, 2066, 2602
RseI CAYNNNNRTG 2 cut(s) 920, 2640
SacI GAGCTC 1 cut(s) 530
SacII CCGCGG 1 cut(s) 375
SalI GTCGAC 2 cut(s) 320, 613
SaqAI TTAA 6 cut(s) 2316, 2420, 2471, 2757, 2801, 2868
Sau96I GGNCC 8 cut(s) 250, 438, 449, 763, 849, 954, 1586, 2311
SchI GAGTC 3 cut(s) 50, 1001, 1097
ScrFI CCNGG 7 cut(s) 474, 685, 703, 767, 1075, 2268, 2766
SduI GDGCHC 7 cut(s) 530, 761, 1779, 2154, 2662, 2846, 2905
SfaNI GCATC 7 cut(s) 957, 1000, 1520, 1615, 1876, 2582, 2985
SfcI CTRYAG 3 cut(s) 1570, 1709, 1848
Sfr303I CCGCGG 1 cut(s) 375
SfuI TTCGAA 1 cut(s) 590
SgrBI CCGCGG 1 cut(s) 375
SgrDI CGTCGACG 1 cut(s) 320
SinI GGWCC 7 cut(s) 438, 449, 763, 849, 954, 1586, 2311
SmiMI CAYNNNNRTG 2 cut(s) 920, 2640
SmlI CTYRAG 3 cut(s) 254, 2315, 2756
SmoI CTYRAG 3 cut(s) 254, 2315, 2756
SpeI ACTAGT 2 cut(s) 1051, 2639
SseBI AGGCCT 1 cut(s) 2029
SspI AATATT 2 cut(s) 1557, 1745
SspMI CTAG 8 cut(s) 498, 1052, 1154, 1188, 1269, 1763, 1991, 2640
SstI GAGCTC 1 cut(s) 530
StuI AGGCCT 1 cut(s) 2029
StyD4I CCNGG 7 cut(s) 472, 683, 701, 765, 1073, 2266, 2764
StyI CCWWGG 2 cut(s) 957, 2040
TaaI ACNGT 9 cut(s) 193, 294, 818, 1385, 1544, 1609, 1654, 1816, 2378
TaiI ACGT 9 cut(s) 143, 555, 620, 632, 777, 1204, 1453, 1701, 2187
TatI WGTACW 4 cut(s) 1539, 1654, 2065, 2601
TauI GCSGC 4 cut(s) 66, 374, 488, 491
TfiI GAWTC 6 cut(s) 463, 1000, 1096, 1987, 2324, 2542
Tru1I TTAA 6 cut(s) 2316, 2420, 2471, 2757, 2801, 2868
Tru9I TTAA 6 cut(s) 2316, 2420, 2471, 2757, 2801, 2868
TscAI CASTG 8 cut(s) 1068, 1336, 1449, 1777, 2068, 2381, 2599, 2652
TseFI GTSAC 1 cut(s) 1077
TseI GCWGC 9 cut(s) 359, 418, 970, 1228, 1486, 1711, 1868, 2488, 2913
Tsp45I GTSAC 1 cut(s) 1077
TspGWI ACGGA 3 cut(s) 413, 776, 1207
TspRI CASTG 8 cut(s) 1068, 1336, 1449, 1777, 2068, 2381, 2599, 2652
Tth111I GACNNNGTC 1 cut(s) 551
Van91I CCANNNNNTGG 2 cut(s) 167, 243
Vha464I CTTAAG 2 cut(s) 2315, 2756
VneI GTGCAC 1 cut(s) 2150
VpaK11BI GGWCC 7 cut(s) 438, 449, 763, 849, 954, 1586, 2311
XapI RAATTY 5 cut(s) 862, 911, 1036, 1195, 2578
XbaI TCTAGA 1 cut(s) 497
XceI RCATGY 2 cut(s) 2243, 2441
XcmI CCANNNNNNNNNTGG 3 cut(s) 244, 1908, 2836
XmiI GTMKAC 2 cut(s) 321, 614
XmnI GAANNNNTTC 2 cut(s) 1463, 1986
XspI CTAG 8 cut(s) 498, 1052, 1154, 1188, 1269, 1763, 1991, 2640
ZraI GACGTC 1 cut(s) 553
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.