Rh5DG432200

PAS fold

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0004648
Physical Location & Seq
Forward (+)
69096812 .. 69104844
8033 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG432200.1

Sequence Viewer

Length: 1569 bp
ATGGAAGACGAACATTCCGAAACGCCAGCCTCACTCATTCCCCCACTCCCAAGAGACTCCCGCGGCTCCCTCGAAGTCTTCAACCCCTCCTCCTCGACCCGACCCGCCAGCCCCCCACCCTTCCGACCGTCCCAACCCGCCTCCTGGAACACCTGGATCGACCCACGTGACCCCAAGCCCGACCCGCCACCCAACGCCGCCTCCAAGTCCGGCCGCGACGGCGACGGCGACGGCACCATCACCTCATGGCTGGCCCTCAAGGACTTCCCCCCAACTCCACCGCCGCCGTCCAAGCCGTCCAAGCAGTCCCAGCAATCGCCGCCGCTCATCCAGCAGACCATCTCCGCCTCGGTCAACGACAAGTCAACGACGGAGCAGAGCGACGCGGCGCAGAGGGCCGCCGAGTGGGGATTGGTTCTGAAGACGGACACGGAGACGGGGAGGCCGCAGGGAGTGACCACCCGGAACTCGGGCGGACCCGAAGACCCGAGCCACAAACCGGGTACCTCCAGAAGAAACTCCAACAACTCGGTCCGGAGCTCCGGGGAGTTGTCCGACGACGGCGGCGGCGGAGGAGGAGGAGGGAAAGGGTTTCCGAGAGCTTCGGAGGACTTGAAGAACGTGCTGTCGACGTTTCAGCAGACGTTCGTGGTGTCGGATGCTACCAAACCCGATTACCCGATCATGTACGCCAGCGCCGGGTTTTTCAAGATGACCGGGTACACCTCCAAGGAGGTCATCGGCAGGAACTGCCGGTTTTTGCAGGGAGCGGACACGGACCCGGACGACGTGGCGCAGCTGACGGAGGCTTTGCAGAAGAACACGAGCTATTGCGGTCGGTTGTTGAATTATAAGAAAGATGGGACCCCTTTTTGGAATTTACTTACTATTGCTCCTATCAAGGACGAAACTGGGAAGGTCCTCAAATTCATTGGAATGCAAGTGGAGGTGAGCAAGCACACTGAGGGGTCCAAGGATAAGATGCTGCGCCCCAATGGATTGCCTGAATCTCTCATTCGATATGATGGTATGGTGCACAGAGCTTGTGCGGAGAGAGAAATCCTCGACATGTTGGATCACCCTTTTCTTCCTGCATTGTATGCTTCGTTTCAGACCAAAACACATGTTTGCCTGATCACTGATTACTACCCTGGTGGAGAACTCTTCCTACTTTTGGACAGCCAACCAACGAAGGTCCTGAAGGAAGATTCAGTGAGATTTTATGTTACAGAGGTAGTTGTTGCCTTGGAGTATCTTCACTGTCAAGGGATAATTTACAGGGATTTGAAGCCTGAAAATGTTTTACTTCAGAGCAGTGGGCACGTAACCCTGACCGATTTTGATTTATCGTGTTTGACATCTTGCAAACCACAGCTTTTAATTCCTACCATAAACGAAAAGAAAAGGCATCACAAAGGTCAACAGAATCCAATCTTCATGGCTGAACCAATGAGAGCATCAAATTCTTTTGTTGGCACGGAAGAGTACATCGCTCCGGAAATCATAACTGGAGCTGGCCATTCTAGTGCAGTAGACTGGTGGGCTCTTGGTAATTTCACTCAATTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0007623 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0009657 GO:0009658 GO:0009785 GO:0009881 GO:0009882 GO:0009898 GO:0009902 GO:0009903 GO:0009904 GO:0009986 GO:0009987 GO:0010119 GO:0010155 GO:0010181 GO:0010359 GO:0010360 GO:0010361 GO:0010362 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019750 GO:0022898 GO:0023052 GO:0030522 GO:0032409 GO:0032410 GO:0032412 GO:0032413 GO:0032553 GO:0032879 GO:0034762 GO:0034763 GO:0034765 GO:0034766 GO:0035556 GO:0036094 GO:0036211 GO:0038023 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043271 GO:0043412 GO:0044070 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046777 GO:0048037 GO:0048511 GO:0048519 GO:0050662 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0051716 GO:0060089 GO:0065007 GO:0065009 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0098552 GO:0098562 GO:0104004 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1903792 GO:1903959 GO:1903960 GO:1904062
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAS_9 Pkinase

Protein Analysis

522

Amino Acids

57.21

Weight (kDa)

5.74

Isoelectric Point (pI)

48.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAS_9 PF13426 222 - 318 3e-20 PAS domain
PAS PF00989 227 - 313 3.1e-08 PAS fold
PAS_3 PF08447 228 - 312 2.2e-07 PAS fold
Pkinase PF00069 347 - 517 3.3e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 348 - 452 9.3e-14 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 852
Acc65I GGTACC 1 cut(s) 503
AccB1I GGYRCC 2 cut(s) 233, 503
AccBSI CCGCTC 2 cut(s) 325, 770
AccI GTMKAC 2 cut(s) 629, 1533
AccII CGCG 3 cut(s) 63, 216, 386
AccIII TCCGGA 2 cut(s) 534, 1495
AclWI GGATC 2 cut(s) 164, 1083
AcoI YGGCCR 2 cut(s) 211, 1516
AcsI RAATTY 3 cut(s) 877, 926, 1462
AcuI CTGAAG 3 cut(s) 440, 1220, 1292
AcvI CACGTG 1 cut(s) 167
AfaI GTAC 4 cut(s) 505, 689, 722, 1487
AfiI CCNNNNNNNGG 7 cut(s) 144, 405, 469, 499, 699, 873, 1174
AflIII ACRYGT 2 cut(s) 1068, 1123
AgsI TTSAA 5 cut(s) 82, 616, 709, 847, 1288
AjiI CACGTC 1 cut(s) 790
AjnI CCWGG 3 cut(s) 143, 152, 1150
AluBI AGCT 7 cut(s) 540, 602, 799, 828, 1043, 1375, 1514
AluI AGCT 7 cut(s) 540, 602, 799, 828, 1043, 1375, 1514
Alw21I GWGCWC 2 cut(s) 542, 1038
Alw26I GTCTC 2 cut(s) 48, 428
Alw44I GTGCAC 1 cut(s) 1034
AlwI GGATC 2 cut(s) 164, 1083
AlwNI CAGNNNCTG 1 cut(s) 750
Ama87I CYCGRG 2 cut(s) 469, 487
Aor13HI TCCGGA 2 cut(s) 534, 1495
AoxI GGCC 5 cut(s) 211, 252, 396, 443, 1516
ApaLI GTGCAC 1 cut(s) 1034
ApeKI GCWGC 2 cut(s) 796, 985
ApoI RAATTY 3 cut(s) 877, 926, 1462
ArsI GACNNNNNNTTYG 2 cut(s) 793, 825
Asp718I GGTACC 1 cut(s) 503
AspLEI GCGC 4 cut(s) 391, 698, 796, 990
AspS9I GGNCC 9 cut(s) 253, 396, 476, 532, 778, 864, 919, 969, 1195
AsuC2I CCSGG 6 cut(s) 463, 501, 544, 700, 718, 782
AsuHPI GGTGA 3 cut(s) 232, 961, 1070
AvaI CYCGRG 2 cut(s) 469, 487
AvaII GGWCC 7 cut(s) 476, 532, 778, 864, 919, 969, 1195
BaeGI GKGCMC 2 cut(s) 1038, 1323
BalI TGGCCA 1 cut(s) 1518
BanI GGYRCC 2 cut(s) 233, 503
BanII GRGCYC 2 cut(s) 542, 1546
BauI CACGAG 1 cut(s) 823
BbrPI CACGTG 1 cut(s) 167
BbsI GAAGAC 4 cut(s) 12, 70, 428, 489
Bbv12I GWGCWC 2 cut(s) 542, 1038
BbvI GCAGC 2 cut(s) 808, 972
BccI CCATC 4 cut(s) 245, 347, 854, 1019
BceAI ACGGC 6 cut(s) 235, 241, 247, 271, 280, 577
BciT130I CCWGG 3 cut(s) 145, 154, 1152
BclI TGATCA 1 cut(s) 1134
BcnI CCSGG 6 cut(s) 463, 501, 544, 700, 718, 782
BcoDI GTCTC 2 cut(s) 48, 428
BfaI CTAG 1 cut(s) 1524
BfoI RGCGCY 1 cut(s) 699
BglI GCCNNNNNGGC 1 cut(s) 219
Bme1390I CCNGG 9 cut(s) 145, 154, 463, 501, 544, 700, 718, 782, 1152
Bme18I GGWCC 7 cut(s) 476, 532, 778, 864, 919, 969, 1195
BmeT110I CYCGRG 2 cut(s) 469, 487
BmgBI CACGTC 1 cut(s) 790
BmgT120I GGNCC 9 cut(s) 253, 396, 476, 532, 778, 864, 919, 969, 1195
BmiI GGNNCC 8 cut(s) 67, 235, 478, 505, 780, 865, 866, 970
BmrFI CCNGG 9 cut(s) 145, 154, 463, 501, 544, 700, 718, 782, 1152
BmrI ACTGGG 1 cut(s) 921
BmsI GCATC 4 cut(s) 649, 972, 1417, 1466
BmuI ACTGGG 1 cut(s) 921
BpiI GAAGAC 4 cut(s) 12, 70, 428, 489
BplI GAGNNNNNCTC 2 cut(s) 1047, 1079
BpmI CTGGAG 2 cut(s) 493, 1530
BpuEI CTTGAG 1 cut(s) 242
BpuMI CCSGG 6 cut(s) 463, 501, 544, 700, 718, 782
BsaAI YACGTR 2 cut(s) 167, 1324
BsaJI CCNNGG 7 cut(s) 61, 348, 543, 729, 972, 1150, 1245
BsaWI WCCGGW 2 cut(s) 534, 1495
BsaXI ACNNNNNCTCC 6 cut(s) 74, 104, 185, 215, 877, 907
Bsc4I CCNNNNNNNGG 7 cut(s) 144, 405, 469, 499, 699, 873, 1174
Bse118I RCCGGY 1 cut(s) 753
Bse1I ACTGG 3 cut(s) 916, 1513, 1541
BseAI TCCGGA 2 cut(s) 534, 1495
BseBI CCWGG 3 cut(s) 145, 154, 1152
BseDI CCNNGG 7 cut(s) 61, 348, 543, 729, 972, 1150, 1245
BseGI GGATG 2 cut(s) 327, 664
BseLI CCNNNNNNNGG 7 cut(s) 144, 405, 469, 499, 699, 873, 1174
BseMII CTCAG 1 cut(s) 954
BseNI ACTGG 3 cut(s) 916, 1513, 1541
BseRI GAGGAG 5 cut(s) 79, 82, 588, 591, 594
BseSI GKGCMC 2 cut(s) 1038, 1323
BseX3I CGGCCG 1 cut(s) 211
BseXI GCAGC 2 cut(s) 808, 972
BseYI CCCAGC 1 cut(s) 309
BsgI GTGCAG 1 cut(s) 1548
Bsh1236I CGCG 3 cut(s) 63, 216, 386
Bsh1285I CGRYCG 3 cut(s) 128, 214, 838
BshFI GGCC 5 cut(s) 213, 254, 398, 445, 1518
BshNI GGYRCC 2 cut(s) 233, 503
BsiEI CGRYCG 3 cut(s) 128, 214, 838
BsiHKAI GWGCWC 2 cut(s) 542, 1038
BsiHKCI CYCGRG 2 cut(s) 469, 487
BslFI GGGAC 3 cut(s) 115, 292, 877
BslI CCNNNNNNNGG 7 cut(s) 144, 405, 469, 499, 699, 873, 1174
BsmAI GTCTC 2 cut(s) 48, 428
BsmBI CGTCTC 1 cut(s) 428
BsmFI GGGAC 3 cut(s) 115, 292, 877
BsmI GAATGC 1 cut(s) 942
BsnI GGCC 5 cut(s) 213, 254, 398, 445, 1518
BsoBI CYCGRG 2 cut(s) 469, 487
Bsp1286I GDGCHC 4 cut(s) 542, 1038, 1323, 1546
Bsp13I TCCGGA 2 cut(s) 534, 1495
Bsp143I GATC 4 cut(s) 156, 681, 1075, 1134
BspANI GGCC 5 cut(s) 213, 254, 398, 445, 1518
BspCNI CTCAG 1 cut(s) 955
BspEI TCCGGA 2 cut(s) 534, 1495
BspFNI CGCG 3 cut(s) 63, 216, 386
BspLI GGNNCC 8 cut(s) 67, 235, 478, 505, 780, 865, 866, 970
BspPI GGATC 2 cut(s) 164, 1083
BspT107I GGYRCC 2 cut(s) 233, 503
BsrBI CCGCTC 2 cut(s) 325, 770
BsrFI RCCGGY 1 cut(s) 753
BsrI ACTGG 3 cut(s) 916, 1513, 1541
BssAI RCCGGY 1 cut(s) 753
BssECI CCNNGG 7 cut(s) 61, 348, 543, 729, 972, 1150, 1245
BssMI GATC 4 cut(s) 156, 681, 1075, 1134
BssSI CACGAG 1 cut(s) 823
BssT1I CCWWGG 3 cut(s) 729, 972, 1245
Bst2BI CACGAG 1 cut(s) 823
Bst2UI CCWGG 3 cut(s) 145, 154, 1152
Bst4CI ACNGT 2 cut(s) 129, 1262
Bst6I CTCTTC 2 cut(s) 1169, 1476
BstAPI GCANNNNNTGC 2 cut(s) 750, 1100
BstBAI YACGTR 2 cut(s) 167, 1324
BstC8I GCNNGC 6 cut(s) 27, 109, 252, 694, 956, 1516
BstDEI CTNAG 1 cut(s) 963
BstDSI CCRYGG 1 cut(s) 61
BstF5I GGATG 2 cut(s) 327, 664
BstFNI CGCG 3 cut(s) 63, 216, 386
BstH2I RGCGCY 1 cut(s) 699
BstHHI GCGC 4 cut(s) 391, 698, 796, 990
BstKTI GATC 4 cut(s) 159, 684, 1078, 1137
BstMAI GTCTC 2 cut(s) 48, 428
BstMBI GATC 4 cut(s) 156, 681, 1075, 1134
BstMCI CGRYCG 3 cut(s) 128, 214, 838
BstNI CCWGG 3 cut(s) 145, 154, 1152
BstNSI RCATGY 2 cut(s) 1072, 1127
BstSCI CCNGG 9 cut(s) 143, 152, 461, 499, 542, 698, 716, 780, 1150
BstSLI GKGCMC 2 cut(s) 1038, 1323
BstUI CGCG 3 cut(s) 63, 216, 386
BstV1I GCAGC 2 cut(s) 808, 972
BstV2I GAAGAC 4 cut(s) 12, 70, 428, 489
BstZI CGGCCG 1 cut(s) 211
BsuRI GGCC 5 cut(s) 213, 254, 398, 445, 1518
BtgI CCRYGG 1 cut(s) 61
BtgZI GCGATG 1 cut(s) 1474
BtrI CACGTC 1 cut(s) 790
BtsCI GGATG 2 cut(s) 327, 664
BtsI GCAGTG 1 cut(s) 1321
BtsIMutI CAGTG 5 cut(s) 960, 1137, 1218, 1258, 1321
Cac8I GCNNGC 6 cut(s) 27, 109, 252, 694, 956, 1516
CaiI CAGNNNCTG 1 cut(s) 750
CfoI GCGC 4 cut(s) 391, 698, 796, 990
Cfr10I RCCGGY 1 cut(s) 753
Cfr13I GGNCC 9 cut(s) 253, 396, 476, 532, 778, 864, 919, 969, 1195
Cfr42I CCGCGG 1 cut(s) 64
CpoI CGGWCCG 1 cut(s) 532
CseI GACGC 1 cut(s) 392
Csp6I GTAC 4 cut(s) 504, 688, 721, 1486
CspI CGGWCCG 1 cut(s) 532
CviAII CATG 5 cut(s) 246, 685, 1069, 1124, 1438
CviQI GTAC 4 cut(s) 504, 688, 721, 1486
DdeI CTNAG 1 cut(s) 963
DpnI GATC 4 cut(s) 158, 683, 1077, 1136
DpnII GATC 4 cut(s) 156, 681, 1075, 1134
EaeI YGGCCR 2 cut(s) 211, 1516
EagI CGGCCG 1 cut(s) 211
Eam1104I CTCTTC 2 cut(s) 1169, 1476
EarI CTCTTC 2 cut(s) 1169, 1476
EciI GGCGGA 3 cut(s) 334, 489, 585
Ecl136II GAGCTC 1 cut(s) 540
EclXI CGGCCG 1 cut(s) 211
Eco130I CCWWGG 3 cut(s) 729, 972, 1245
Eco24I GRGCYC 2 cut(s) 542, 1546
Eco47I GGWCC 7 cut(s) 476, 532, 778, 864, 919, 969, 1195
Eco52I CGGCCG 1 cut(s) 211
Eco53kI GAGCTC 1 cut(s) 540
Eco57I CTGAAG 3 cut(s) 440, 1220, 1292
Eco72I CACGTG 1 cut(s) 167
Eco88I CYCGRG 2 cut(s) 469, 487
EcoICRI GAGCTC 1 cut(s) 540
EcoO109I RGGNCCY 3 cut(s) 864, 919, 1195
EcoRII CCWGG 3 cut(s) 143, 152, 1150
EcoT14I CCWWGG 3 cut(s) 729, 972, 1245
EcoT38I GRGCYC 2 cut(s) 542, 1546
ErhI CCWWGG 3 cut(s) 729, 972, 1245
Esp3I CGTCTC 1 cut(s) 428
FaeI CATG 5 cut(s) 249, 688, 1072, 1127, 1441
FaqI GGGAC 3 cut(s) 115, 292, 877
FatI CATG 5 cut(s) 245, 684, 1068, 1123, 1437
FauI CCCGC 4 cut(s) 68, 112, 145, 192
FbaI TGATCA 1 cut(s) 1134
FblI GTMKAC 2 cut(s) 629, 1533
FokI GGATG 2 cut(s) 314, 671
FriOI GRGCYC 2 cut(s) 542, 1546
FspBI CTAG 1 cut(s) 1524
GlaI GCGC 4 cut(s) 390, 697, 795, 989
GsaI CCCAGC 1 cut(s) 313
GsuI CTGGAG 2 cut(s) 493, 1530
HaeII RGCGCY 1 cut(s) 699
HaeIII GGCC 5 cut(s) 213, 254, 398, 445, 1518
HgaI GACGC 1 cut(s) 392
HhaI GCGC 4 cut(s) 391, 698, 796, 990
Hin1II CATG 5 cut(s) 249, 688, 1072, 1127, 1441
Hin6I GCGC 4 cut(s) 389, 696, 794, 988
HinP1I GCGC 4 cut(s) 389, 696, 794, 988
HincII GTYRAC 4 cut(s) 355, 366, 630, 1421
HindII GTYRAC 4 cut(s) 355, 366, 630, 1421
HinfI GANTC 4 cut(s) 56, 1007, 1208, 1426
HphI GGTGA 3 cut(s) 232, 961, 1070
Hpy166II GTNNAC 7 cut(s) 355, 366, 630, 723, 1036, 1421, 1534
Hpy188III TCNNGA 5 cut(s) 510, 535, 709, 1198, 1496
Hpy8I GTNNAC 7 cut(s) 355, 366, 630, 723, 1036, 1421, 1534
Hpy99I CGWCG 9 cut(s) 221, 227, 233, 373, 386, 560, 563, 634, 791
HpyAV CCTTC 4 cut(s) 130, 910, 1186, 1195
HpyCH4III ACNGT 2 cut(s) 129, 1262
HpyCH4IV ACGT 6 cut(s) 166, 621, 632, 644, 789, 1323
HpyCH4V TGCA 7 cut(s) 763, 814, 940, 1036, 1094, 1365, 1529
HpyF3I CTNAG 1 cut(s) 963
HpySE526I ACGT 6 cut(s) 166, 621, 632, 644, 789, 1323
Hsp92II CATG 5 cut(s) 249, 688, 1072, 1127, 1441
HspAI GCGC 4 cut(s) 389, 696, 794, 988
KflI GGGWCCC 1 cut(s) 864
Kpn2I TCCGGA 2 cut(s) 534, 1495
KpnI GGTACC 1 cut(s) 507
Ksp22I TGATCA 1 cut(s) 1134
KspI CCGCGG 1 cut(s) 64
Kzo9I GATC 4 cut(s) 156, 681, 1075, 1134
LmnI GCTCC 8 cut(s) 71, 373, 537, 545, 767, 898, 1498, 1511
Lsp1109I GCAGC 2 cut(s) 808, 972
LweI GCATC 4 cut(s) 649, 972, 1417, 1466
MaeI CTAG 1 cut(s) 1524
MaeII ACGT 6 cut(s) 166, 621, 632, 644, 789, 1323
MaeIII GTNAC 4 cut(s) 167, 454, 1225, 1324
MalI GATC 4 cut(s) 158, 683, 1077, 1136
MbiI CCGCTC 2 cut(s) 325, 770
MboI GATC 4 cut(s) 156, 681, 1075, 1134
MhlI GDGCHC 4 cut(s) 542, 1038, 1323, 1546
MlsI TGGCCA 1 cut(s) 1518
MluCI AATT 8 cut(s) 847, 877, 926, 1272, 1380, 1462, 1552, 1562
MluNI TGGCCA 1 cut(s) 1518
MlyI GAGTC 1 cut(s) 50
MmeI TCCRAC 5 cut(s) 148, 546, 579, 636, 1053
Mox20I TGGCCA 1 cut(s) 1518
MroI TCCGGA 2 cut(s) 534, 1495
MscI TGGCCA 1 cut(s) 1518
MseI TTAA 1 cut(s) 1379
MslI CAYNNNNRTG 2 cut(s) 935, 1524
Msp20I TGGCCA 1 cut(s) 1518
MspA1I CMGCKG 2 cut(s) 63, 799
MspR9I CCNGG 9 cut(s) 145, 154, 463, 501, 544, 700, 718, 782, 1152
Mva1269I GAATGC 1 cut(s) 942
MvaI CCWGG 3 cut(s) 145, 154, 1152
MvnI CGCG 3 cut(s) 63, 216, 386
NciI CCSGG 6 cut(s) 463, 501, 544, 700, 718, 782
NdeII GATC 4 cut(s) 156, 681, 1075, 1134
NlaIII CATG 5 cut(s) 249, 688, 1072, 1127, 1441
NlaIV GGNNCC 8 cut(s) 67, 235, 478, 505, 780, 865, 866, 970
NmeAIII GCCGAG 1 cut(s) 427
NmuCI GTSAC 2 cut(s) 167, 454
NspI RCATGY 2 cut(s) 1072, 1127
PciI ACATGT 2 cut(s) 1068, 1123
PcsI WCGNNNNNNNCGW 2 cut(s) 15, 225
PctI GAATGC 1 cut(s) 942
PfeI GAWTC 3 cut(s) 1007, 1208, 1426
PfoI TCCNGGA 1 cut(s) 143
PleI GAGTC 1 cut(s) 50
PmaCI CACGTG 1 cut(s) 167
PmlI CACGTG 1 cut(s) 167
PpsI GAGTC 1 cut(s) 50
Ppu21I YACGTR 2 cut(s) 167, 1324
PpuMI RGGWCCY 3 cut(s) 864, 919, 1195
PscI ACATGT 2 cut(s) 1068, 1123
PsiI TTATAA 1 cut(s) 852
Psp124BI GAGCTC 1 cut(s) 542
Psp5II RGGWCCY 3 cut(s) 864, 919, 1195
Psp6I CCWGG 3 cut(s) 143, 152, 1150
PspCI CACGTG 1 cut(s) 167
PspFI CCCAGC 1 cut(s) 309
PspGI CCWGG 3 cut(s) 143, 152, 1150
PspN4I GGNNCC 8 cut(s) 67, 235, 478, 505, 780, 865, 866, 970
PspPI GGNCC 9 cut(s) 253, 396, 476, 532, 778, 864, 919, 969, 1195
PspPPI RGGWCCY 3 cut(s) 864, 919, 1195
PsrI GAACNNNNNNTAC 2 cut(s) 1152, 1184
PstNI CAGNNNCTG 1 cut(s) 750
PvuII CAGCTG 1 cut(s) 799
RsaI GTAC 4 cut(s) 505, 689, 722, 1487
RsaNI GTAC 4 cut(s) 504, 688, 721, 1486
RseI CAYNNNNRTG 2 cut(s) 935, 1524
Rsr2I CGGWCCG 1 cut(s) 532
RsrII CGGWCCG 1 cut(s) 532
SacI GAGCTC 1 cut(s) 542
SacII CCGCGG 1 cut(s) 64
SalI GTCGAC 1 cut(s) 628
SaqAI TTAA 1 cut(s) 1379
Sau3AI GATC 4 cut(s) 156, 681, 1075, 1134
Sau96I GGNCC 9 cut(s) 253, 396, 476, 532, 778, 864, 919, 969, 1195
SchI GAGTC 1 cut(s) 50
ScrFI CCNGG 9 cut(s) 145, 154, 463, 501, 544, 700, 718, 782, 1152
SduI GDGCHC 4 cut(s) 542, 1038, 1323, 1546
SfaNI GCATC 4 cut(s) 649, 972, 1417, 1466
Sfr303I CCGCGG 1 cut(s) 64
SgrBI CCGCGG 1 cut(s) 64
SinI GGWCC 7 cut(s) 476, 532, 778, 864, 919, 969, 1195
SmiMI CAYNNNNRTG 2 cut(s) 935, 1524
SmlI CTYRAG 1 cut(s) 257
SmoI CTYRAG 1 cut(s) 257
Sse9I AATT 8 cut(s) 847, 877, 926, 1272, 1380, 1462, 1552, 1562
SspMI CTAG 1 cut(s) 1524
SstI GAGCTC 1 cut(s) 542
StyD4I CCNGG 9 cut(s) 143, 152, 461, 499, 542, 698, 716, 780, 1150
StyI CCWWGG 3 cut(s) 729, 972, 1245
TaaI ACNGT 2 cut(s) 129, 1262
TaiI ACGT 6 cut(s) 169, 624, 635, 647, 792, 1326
TaqI TCGA 6 cut(s) 72, 95, 159, 629, 1018, 1065
TaqII GACCGA 3 cut(s) 340, 520, 1349
TasI AATT 8 cut(s) 847, 877, 926, 1272, 1380, 1462, 1552, 1562
TatI WGTACW 1 cut(s) 1485
TfiI GAWTC 3 cut(s) 1007, 1208, 1426
Tru1I TTAA 1 cut(s) 1379
Tru9I TTAA 1 cut(s) 1379
TscAI CASTG 5 cut(s) 967, 1144, 1218, 1265, 1321
TseFI GTSAC 2 cut(s) 167, 454
TseI GCWGC 2 cut(s) 796, 985
Tsp45I GTSAC 2 cut(s) 167, 454
TspDTI ATGAA 2 cut(s) 919, 1426
TspGWI ACGGA 6 cut(s) 386, 440, 446, 791, 818, 1493
TspRI CASTG 5 cut(s) 967, 1144, 1218, 1265, 1321
VneI GTGCAC 1 cut(s) 1034
VpaK11BI GGWCC 7 cut(s) 476, 532, 778, 864, 919, 969, 1195
XapI RAATTY 3 cut(s) 877, 926, 1462
XceI RCATGY 2 cut(s) 1072, 1127
XmiI GTMKAC 2 cut(s) 629, 1533
XspI CTAG 1 cut(s) 1524
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.