Rh5AG405100

PAS fold

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0004648
Physical Location & Seq
Forward (+)
70186317 .. 70193046
6730 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG405100.1

Sequence Viewer

Length: 1464 bp
ATGGGAGTCAGTAGTGAAGGGGTCTACAACTTGACCCCCGAAAGGTCCCAACCAAAGTTTCCCGACGTGACCCTCTCCCATAGAGCCAAAAGCCAGAAGAAATCATTGAAGAGAAGAAGAAGATCGGAAATGGAAGACGAACATTCCGAAACGCCAGCCTCACTCATTCCCCCACTCCCAAGAGACTCCCGCGGCTCCCTCGAAGTCTTCAACCCCTCCTCCTCGATCCGACCCGCCAGCCCCCCACCCTTCCGACCTTCCCAACCCGCCTCCTGGAACACCTGGATCGACCCACGTGACCCCAAGCCCGACCCGCCACCCAACGCCGCCTCCAAGTCCGGCGGCGACGGCACCATCACCTCATGGATGGCCCTCAAGGACTTCCCCCCAACTCCACCGCCGCCGTCCAAGCAGTCCAAACAGTCCCAGCAATCCCCGCCGCTCATCCAGCAGACCATCTCCTCCTCGGTCAACGACAAGTCAACGCCGGAGCAGAGCGACGCCGCTCAGAGAGCCGCCGAGTGGGGATTGGTTCTGAAGACGGACACGGAGACGGGGAAGCCGCAGGGAGTGACCACCCGGAACTCGGGCGGACCCGAAGACCCGAGCCACAAACCGGGTACCTCCAGAAGAAACTCCAACAACTCGGTCCGGAGCTCCGGGGAGTTGTCCGACGACGGCGGCGGAGGAGGAGGAAAAGGGTTTCCGAGAGCTTCGGAGGACTTGAAGAACGTGCTGTCGACGTTTCAGCAGACGTTCGTGGTGTCGGATGCTACCAAACCCGATTACCCGATCATGTACGCCAGCGCCGGGTTTTTCAAGATGACCGGGTACACCTCCAAGGAGGTCATCGGCAGGAACTGCCGGTTTTTGCAGGGAGCGGATACGGACCCGGACGACGTGGCGCAGCTGAGGGAGGCTTTGCAGAAGAACACGAGCTATTGCGGTCGGTTGTTGAATTATAAGAAAGATGGGACCCCTTTTTGGAATTTACTTACTATTGCTCCTATCAAGGACGAAACTGGGAAGGTCCTCAAATTCATTGGAATGCAAGTGGAGGTGAGCAAGCACACTGAGGGGTCCAAGGATAAGATGCTGCGCCCCAATGGATTGCCTGAATCTCTCATTCGATATGATGCTCGTCAGAAAGAGATGGCTACACATTCAGTAACTGAGCTTGTGCAGGCAGTGAGGAGACCGAGGTCACTTAGTGAATCGACAAATCGTCCCTTTAGAAAGTCCGGAGGTGGCGGTAGGGGAGAGGAGGTAATAGAAGCTCTTGCGAGGAGAAACTCCGAGAGTTTGCCTAGGAGAAACTCAGAGAATGTGGCACCACCTAGACGTAACTCACTTGGGGATGCTAAAATCTCAATGCAGTGTATCAATGAGGTTCCTGAAAAGAAACAGAAAAAATCTAGACGGCGCTCTTTCATGGGGTATCGTTTCGCTTCTTCTTATAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0007623 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0009657 GO:0009658 GO:0009785 GO:0009881 GO:0009882 GO:0009898 GO:0009902 GO:0009903 GO:0009904 GO:0009986 GO:0009987 GO:0010119 GO:0010155 GO:0010181 GO:0010359 GO:0010360 GO:0010361 GO:0010362 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019750 GO:0022898 GO:0023052 GO:0030522 GO:0032409 GO:0032410 GO:0032412 GO:0032413 GO:0032553 GO:0032879 GO:0034762 GO:0034763 GO:0034765 GO:0034766 GO:0035556 GO:0036094 GO:0036211 GO:0038023 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043271 GO:0043412 GO:0044070 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046777 GO:0048037 GO:0048511 GO:0048519 GO:0050662 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0051716 GO:0060089 GO:0065007 GO:0065009 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0098552 GO:0098562 GO:0104004 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1903792 GO:1903959 GO:1903960 GO:1904062
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAS_9 Pkinase

Protein Analysis

487

Amino Acids

53.66

Weight (kDa)

9.79

Isoelectric Point (pI)

65.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAS_9 PF13426 259 - 355 1.1e-20 PAS domain
PAS PF00989 264 - 350 2.5e-08 PAS fold
PAS_3 PF08447 265 - 349 8.8e-08 PAS fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 963, 1458
Acc65I GGTACC 1 cut(s) 620
AccB1I GGYRCC 3 cut(s) 350, 620, 1330
AccBSI CCGCTC 3 cut(s) 442, 506, 881
AccI GTMKAC 2 cut(s) 24, 740
AccII CGCG 1 cut(s) 192
AccIII TCCGGA 2 cut(s) 651, 1241
AclWI GGATC 2 cut(s) 220, 293
AcsI RAATTY 2 cut(s) 988, 1037
AcuI CTGAAG 1 cut(s) 557
AcvI CACGTG 1 cut(s) 296
AcyI GRCGYC 1 cut(s) 501
AdeI CACNNNGTG 1 cut(s) 1211
AfaI GTAC 3 cut(s) 622, 800, 833
AfiI CCNNNNNNNGG 7 cut(s) 42, 273, 522, 586, 616, 810, 984
AgsI TTSAA 5 cut(s) 109, 211, 727, 820, 958
AhdI GACNNNNNGTC 1 cut(s) 1224
AjiI CACGTC 2 cut(s) 67, 901
AjnI CCWGG 2 cut(s) 272, 281
AjuI GAANNNNNNNTTGG 2 cut(s) 42, 74
AluBI AGCT 6 cut(s) 657, 713, 910, 939, 1177, 1277
AluI AGCT 6 cut(s) 657, 713, 910, 939, 1177, 1277
Alw21I GWGCWC 1 cut(s) 659
Alw26I GTCTC 3 cut(s) 177, 545, 1189
AlwI GGATC 2 cut(s) 220, 293
AlwNI CAGNNNCTG 2 cut(s) 861, 1172
Ama87I CYCGRG 2 cut(s) 586, 604
Aor13HI TCCGGA 2 cut(s) 651, 1241
AoxI GGCC 1 cut(s) 369
ApeKI GCWGC 2 cut(s) 907, 1096
ApoI RAATTY 2 cut(s) 988, 1037
Asp718I GGTACC 1 cut(s) 620
AspA2I CCTAGG 1 cut(s) 1307
AspLEI GCGC 4 cut(s) 809, 907, 1101, 1425
AspS9I GGNCC 8 cut(s) 45, 370, 593, 649, 889, 975, 1030, 1080
AsuC2I CCSGG 6 cut(s) 580, 618, 661, 811, 829, 893
AsuHPI GGTGA 2 cut(s) 349, 1072
AvaI CYCGRG 2 cut(s) 586, 604
AvaII GGWCC 7 cut(s) 45, 593, 649, 889, 975, 1030, 1080
AvrII CCTAGG 1 cut(s) 1307
BanI GGYRCC 3 cut(s) 350, 620, 1330
BanII GRGCYC 1 cut(s) 659
BauI CACGAG 1 cut(s) 934
BbrPI CACGTG 1 cut(s) 296
BbsI GAAGAC 4 cut(s) 141, 199, 545, 606
Bbv12I GWGCWC 1 cut(s) 659
BbvCI CCTCAGC 1 cut(s) 911
BbvI GCAGC 2 cut(s) 919, 1083
BccI CCATC 5 cut(s) 361, 362, 464, 965, 1147
BceAI ACGGC 4 cut(s) 364, 388, 694, 1436
BciT130I CCWGG 2 cut(s) 274, 283
BciVI GTATCC 1 cut(s) 877
BcnI CCSGG 6 cut(s) 580, 618, 661, 811, 829, 893
BcoDI GTCTC 3 cut(s) 177, 545, 1189
BfaI CTAG 3 cut(s) 1308, 1338, 1416
BfoI RGCGCY 2 cut(s) 810, 1426
BfuI GTATCC 1 cut(s) 877
BlnI CCTAGG 1 cut(s) 1307
Bme1390I CCNGG 8 cut(s) 274, 283, 580, 618, 661, 811, 829, 893
Bme18I GGWCC 7 cut(s) 45, 593, 649, 889, 975, 1030, 1080
BmeRI GACNNNNNGTC 1 cut(s) 1224
BmeT110I CYCGRG 2 cut(s) 586, 604
BmgBI CACGTC 2 cut(s) 67, 901
BmgT120I GGNCC 8 cut(s) 45, 370, 593, 649, 889, 975, 1030, 1080
BmrFI CCNGG 8 cut(s) 274, 283, 580, 618, 661, 811, 829, 893
BmrI ACTGGG 1 cut(s) 1032
BmsI GCATC 4 cut(s) 760, 1083, 1126, 1348
BmuI ACTGGG 1 cut(s) 1032
BoxI GACNNNNGTC 1 cut(s) 1201
BpiI GAAGAC 4 cut(s) 141, 199, 545, 606
BpmI CTGGAG 1 cut(s) 610
Bpu10I CCTNAGC 1 cut(s) 911
BpuEI CTTGAG 1 cut(s) 359
BpuMI CCSGG 6 cut(s) 580, 618, 661, 811, 829, 893
BsaAI YACGTR 1 cut(s) 296
BsaHI GRCGYC 1 cut(s) 501
BsaI GGTCTC 1 cut(s) 1189
BsaJI CCNNGG 7 cut(s) 190, 465, 660, 840, 1083, 1199, 1307
BsaWI WCCGGW 2 cut(s) 651, 1241
BsaXI ACNNNNNCTCC 8 cut(s) 203, 233, 314, 344, 988, 1018, 1251, 1281
Bsc4I CCNNNNNNNGG 7 cut(s) 42, 273, 522, 586, 616, 810, 984
Bse118I RCCGGY 1 cut(s) 864
Bse1I ACTGG 1 cut(s) 1027
BseAI TCCGGA 2 cut(s) 651, 1241
BseBI CCWGG 2 cut(s) 274, 283
BseDI CCNNGG 7 cut(s) 190, 465, 660, 840, 1083, 1199, 1307
BseGI GGATG 4 cut(s) 372, 444, 775, 1363
BseLI CCNNNNNNNGG 7 cut(s) 42, 273, 522, 586, 616, 810, 984
BseMII CTCAG 5 cut(s) 521, 902, 1065, 1164, 1332
BseNI ACTGG 1 cut(s) 1027
BseRI GAGGAG 9 cut(s) 208, 211, 451, 454, 702, 705, 1207, 1277, 1300
BseXI GCAGC 2 cut(s) 919, 1083
BseYI CCCAGC 1 cut(s) 426
BsgI GTGCAG 1 cut(s) 1202
Bsh1236I CGCG 1 cut(s) 192
Bsh1285I CGRYCG 1 cut(s) 949
BshFI GGCC 1 cut(s) 371
BshNI GGYRCC 3 cut(s) 350, 620, 1330
BsiEI CGRYCG 1 cut(s) 949
BsiHKAI GWGCWC 1 cut(s) 659
BsiHKCI CYCGRG 2 cut(s) 586, 604
BslFI GGGAC 4 cut(s) 31, 409, 988, 1212
BslI CCNNNNNNNGG 7 cut(s) 42, 273, 522, 586, 616, 810, 984
BsmAI GTCTC 3 cut(s) 177, 545, 1189
BsmBI CGTCTC 1 cut(s) 545
BsmFI GGGAC 4 cut(s) 31, 409, 988, 1212
BsmI GAATGC 1 cut(s) 1053
BsnI GGCC 1 cut(s) 371
Bso31I GGTCTC 1 cut(s) 1189
BsoBI CYCGRG 2 cut(s) 586, 604
Bsp1286I GDGCHC 1 cut(s) 659
Bsp13I TCCGGA 2 cut(s) 651, 1241
Bsp143I GATC 4 cut(s) 122, 225, 285, 792
BspANI GGCC 1 cut(s) 371
BspCNI CTCAG 5 cut(s) 520, 903, 1066, 1165, 1331
BspEI TCCGGA 2 cut(s) 651, 1241
BspFNI CGCG 1 cut(s) 192
BspPI GGATC 2 cut(s) 220, 293
BspT107I GGYRCC 3 cut(s) 350, 620, 1330
BspTNI GGTCTC 1 cut(s) 1189
BsrBI CCGCTC 3 cut(s) 442, 506, 881
BsrFI RCCGGY 1 cut(s) 864
BsrI ACTGG 1 cut(s) 1027
BssAI RCCGGY 1 cut(s) 864
BssECI CCNNGG 7 cut(s) 190, 465, 660, 840, 1083, 1199, 1307
BssMI GATC 4 cut(s) 122, 225, 285, 792
BssNI GRCGYC 1 cut(s) 501
BssSI CACGAG 1 cut(s) 934
BssT1I CCWWGG 3 cut(s) 840, 1083, 1307
Bst2BI CACGAG 1 cut(s) 934
Bst2UI CCWGG 2 cut(s) 274, 283
Bst4CI ACNGT 1 cut(s) 423
Bst6I CTCTTC 1 cut(s) 104
BstACI GRCGYC 1 cut(s) 501
BstAPI GCANNNNNTGC 1 cut(s) 861
BstBAI YACGTR 1 cut(s) 296
BstC8I GCNNGC 5 cut(s) 156, 238, 805, 1067, 1185
BstDEI CTNAG 6 cut(s) 507, 911, 1074, 1173, 1208, 1318
BstDSI CCRYGG 1 cut(s) 190
BstF5I GGATG 4 cut(s) 372, 444, 775, 1363
BstFNI CGCG 1 cut(s) 192
BstH2I RGCGCY 2 cut(s) 810, 1426
BstHHI GCGC 4 cut(s) 809, 907, 1101, 1425
BstKTI GATC 4 cut(s) 125, 228, 288, 795
BstMAI GTCTC 3 cut(s) 177, 545, 1189
BstMBI GATC 4 cut(s) 122, 225, 285, 792
BstMCI CGRYCG 1 cut(s) 949
BstMWI GCNNNNNNNGC 7 cut(s) 313, 348, 409, 436, 448, 512, 861
BstNI CCWGG 2 cut(s) 274, 283
BstPAI GACNNNNGTC 1 cut(s) 1201
BstSCI CCNGG 8 cut(s) 272, 281, 578, 616, 659, 809, 827, 891
BstUI CGCG 1 cut(s) 192
BstV1I GCAGC 2 cut(s) 919, 1083
BstV2I GAAGAC 4 cut(s) 141, 199, 545, 606
BsuI GTATCC 1 cut(s) 877
BsuRI GGCC 1 cut(s) 371
BtgI CCRYGG 1 cut(s) 190
BtrI CACGTC 2 cut(s) 67, 901
BtsCI GGATG 4 cut(s) 372, 444, 775, 1363
BtsI GCAGTG 2 cut(s) 1194, 1382
BtsIMutI CAGTG 3 cut(s) 1071, 1194, 1382
Cac8I GCNNGC 5 cut(s) 156, 238, 805, 1067, 1185
CaiI CAGNNNCTG 2 cut(s) 861, 1172
CfoI GCGC 4 cut(s) 809, 907, 1101, 1425
Cfr10I RCCGGY 1 cut(s) 864
Cfr13I GGNCC 8 cut(s) 45, 370, 593, 649, 889, 975, 1030, 1080
Cfr42I CCGCGG 1 cut(s) 193
CpoI CGGWCCG 1 cut(s) 649
CseI GACGC 1 cut(s) 509
Csp6I GTAC 3 cut(s) 621, 799, 832
CspI CGGWCCG 1 cut(s) 649
CviAII CATG 3 cut(s) 363, 796, 1432
CviQI GTAC 3 cut(s) 621, 799, 832
DdeI CTNAG 6 cut(s) 507, 911, 1074, 1173, 1208, 1318
DpnI GATC 4 cut(s) 124, 227, 287, 794
DpnII GATC 4 cut(s) 122, 225, 285, 792
DraIII CACNNNGTG 1 cut(s) 1211
DriI GACNNNNNGTC 1 cut(s) 1224
Eam1104I CTCTTC 1 cut(s) 104
Eam1105I GACNNNNNGTC 1 cut(s) 1224
EarI CTCTTC 1 cut(s) 104
EciI GGCGGA 2 cut(s) 606, 699
Ecl136II GAGCTC 1 cut(s) 657
Eco130I CCWWGG 3 cut(s) 840, 1083, 1307
Eco24I GRGCYC 1 cut(s) 659
Eco31I GGTCTC 1 cut(s) 1189
Eco47I GGWCC 7 cut(s) 45, 593, 649, 889, 975, 1030, 1080
Eco53kI GAGCTC 1 cut(s) 657
Eco57I CTGAAG 1 cut(s) 557
Eco72I CACGTG 1 cut(s) 296
Eco88I CYCGRG 2 cut(s) 586, 604
EcoICRI GAGCTC 1 cut(s) 657
EcoO109I RGGNCCY 3 cut(s) 45, 975, 1030
EcoRII CCWGG 2 cut(s) 272, 281
EcoT14I CCWWGG 3 cut(s) 840, 1083, 1307
EcoT38I GRGCYC 1 cut(s) 659
ErhI CCWWGG 3 cut(s) 840, 1083, 1307
Esp3I CGTCTC 1 cut(s) 545
FaeI CATG 3 cut(s) 366, 799, 1435
FaiI YATR 7 cut(s) 81, 364, 797, 963, 1134, 1433, 1458
FaqI GGGAC 4 cut(s) 31, 409, 988, 1212
FatI CATG 3 cut(s) 362, 795, 1431
FauI CCCGC 5 cut(s) 197, 241, 274, 321, 444
FblI GTMKAC 2 cut(s) 24, 740
FokI GGATG 4 cut(s) 379, 431, 782, 1370
FriOI GRGCYC 1 cut(s) 659
FspBI CTAG 3 cut(s) 1308, 1338, 1416
GlaI GCGC 4 cut(s) 808, 906, 1100, 1424
GsaI CCCAGC 1 cut(s) 430
GsuI CTGGAG 1 cut(s) 610
HaeII RGCGCY 2 cut(s) 810, 1426
HaeIII GGCC 1 cut(s) 371
HgaI GACGC 1 cut(s) 509
HhaI GCGC 4 cut(s) 809, 907, 1101, 1425
Hin1I GRCGYC 1 cut(s) 501
Hin1II CATG 3 cut(s) 366, 799, 1435
Hin6I GCGC 4 cut(s) 807, 905, 1099, 1423
HinP1I GCGC 4 cut(s) 807, 905, 1099, 1423
HincII GTYRAC 3 cut(s) 472, 483, 741
HindII GTYRAC 3 cut(s) 472, 483, 741
HinfI GANTC 4 cut(s) 6, 185, 1118, 1214
HphI GGTGA 2 cut(s) 349, 1072
Hpy166II GTNNAC 5 cut(s) 25, 472, 483, 741, 834
Hpy188III TCNNGA 7 cut(s) 62, 627, 652, 820, 1242, 1394, 1416
Hpy8I GTNNAC 5 cut(s) 25, 472, 483, 741, 834
Hpy99I CGWCG 7 cut(s) 68, 350, 503, 677, 680, 745, 902
HpyAV CCTTC 4 cut(s) 11, 259, 267, 1021
HpyCH4III ACNGT 1 cut(s) 423
HpyCH4IV ACGT 7 cut(s) 66, 295, 732, 743, 755, 900, 1342
HpyCH4V TGCA 5 cut(s) 874, 925, 1051, 1183, 1375
HpyF10VI GCNNNNNNNGC 7 cut(s) 313, 348, 409, 436, 448, 512, 861
HpyF3I CTNAG 6 cut(s) 507, 911, 1074, 1173, 1208, 1318
HpySE526I ACGT 7 cut(s) 66, 295, 732, 743, 755, 900, 1342
Hsp92I GRCGYC 1 cut(s) 501
Hsp92II CATG 3 cut(s) 366, 799, 1435
HspAI GCGC 4 cut(s) 807, 905, 1099, 1423
KflI GGGWCCC 1 cut(s) 975
Kpn2I TCCGGA 2 cut(s) 651, 1241
KpnI GGTACC 1 cut(s) 624
KspI CCGCGG 1 cut(s) 193
Kzo9I GATC 4 cut(s) 122, 225, 285, 792
LmnI GCTCC 6 cut(s) 200, 490, 654, 662, 878, 1009
Lsp1109I GCAGC 2 cut(s) 919, 1083
LweI GCATC 4 cut(s) 760, 1083, 1126, 1348
MaeI CTAG 3 cut(s) 1308, 1338, 1416
MaeII ACGT 7 cut(s) 66, 295, 732, 743, 755, 900, 1342
MaeIII GTNAC 6 cut(s) 67, 296, 571, 1168, 1203, 1343
MalI GATC 4 cut(s) 124, 227, 287, 794
MbiI CCGCTC 3 cut(s) 442, 506, 881
MboI GATC 4 cut(s) 122, 225, 285, 792
MhlI GDGCHC 1 cut(s) 659
MluCI AATT 3 cut(s) 958, 988, 1037
MlyI GAGTC 2 cut(s) 15, 179
MmeI TCCRAC 5 cut(s) 253, 277, 663, 696, 747
MroI TCCGGA 2 cut(s) 651, 1241
MslI CAYNNNNRTG 1 cut(s) 1046
MspA1I CMGCKG 2 cut(s) 192, 910
MspR9I CCNGG 8 cut(s) 274, 283, 580, 618, 661, 811, 829, 893
Mva1269I GAATGC 1 cut(s) 1053
MvaI CCWGG 2 cut(s) 274, 283
MvnI CGCG 1 cut(s) 192
MwoI GCNNNNNNNGC 7 cut(s) 313, 348, 409, 436, 448, 512, 861
NciI CCSGG 6 cut(s) 580, 618, 661, 811, 829, 893
NdeII GATC 4 cut(s) 122, 225, 285, 792
NlaIII CATG 3 cut(s) 366, 799, 1435
NmeAIII GCCGAG 1 cut(s) 544
NmuCI GTSAC 4 cut(s) 67, 296, 571, 1203
PcsI WCGNNNNNNNCGW 1 cut(s) 144
PctI GAATGC 1 cut(s) 1053
PfeI GAWTC 2 cut(s) 1118, 1214
PfoI TCCNGGA 1 cut(s) 272
PleI GAGTC 2 cut(s) 14, 179
PmaCI CACGTG 1 cut(s) 296
PmlI CACGTG 1 cut(s) 296
PpsI GAGTC 2 cut(s) 14, 179
Ppu21I YACGTR 1 cut(s) 296
PpuMI RGGWCCY 3 cut(s) 45, 975, 1030
PshAI GACNNNNGTC 1 cut(s) 1201
PsiI TTATAA 2 cut(s) 963, 1458
Psp124BI GAGCTC 1 cut(s) 659
Psp5II RGGWCCY 3 cut(s) 45, 975, 1030
Psp6I CCWGG 2 cut(s) 272, 281
PspCI CACGTG 1 cut(s) 296
PspFI CCCAGC 1 cut(s) 426
PspGI CCWGG 2 cut(s) 272, 281
PspPI GGNCC 8 cut(s) 45, 370, 593, 649, 889, 975, 1030, 1080
PspPPI RGGWCCY 3 cut(s) 45, 975, 1030
PstNI CAGNNNCTG 2 cut(s) 861, 1172
PvuII CAGCTG 1 cut(s) 910
RsaI GTAC 3 cut(s) 622, 800, 833
RsaNI GTAC 3 cut(s) 621, 799, 832
RseI CAYNNNNRTG 1 cut(s) 1046
Rsr2I CGGWCCG 1 cut(s) 649
RsrII CGGWCCG 1 cut(s) 649
SacI GAGCTC 1 cut(s) 659
SacII CCGCGG 1 cut(s) 193
SalI GTCGAC 1 cut(s) 739
Sau3AI GATC 4 cut(s) 122, 225, 285, 792
Sau96I GGNCC 8 cut(s) 45, 370, 593, 649, 889, 975, 1030, 1080
SchI GAGTC 2 cut(s) 15, 179
ScrFI CCNGG 8 cut(s) 274, 283, 580, 618, 661, 811, 829, 893
SduI GDGCHC 1 cut(s) 659
SfaNI GCATC 4 cut(s) 760, 1083, 1126, 1348
Sfr303I CCGCGG 1 cut(s) 193
SgrBI CCGCGG 1 cut(s) 193
SinI GGWCC 7 cut(s) 45, 593, 649, 889, 975, 1030, 1080
SmiMI CAYNNNNRTG 1 cut(s) 1046
SmlI CTYRAG 1 cut(s) 374
SmoI CTYRAG 1 cut(s) 374
Sse9I AATT 3 cut(s) 958, 988, 1037
SspMI CTAG 3 cut(s) 1308, 1338, 1416
SstI GAGCTC 1 cut(s) 659
StyD4I CCNGG 8 cut(s) 272, 281, 578, 616, 659, 809, 827, 891
StyI CCWWGG 3 cut(s) 840, 1083, 1307
TaaI ACNGT 1 cut(s) 423
TaiI ACGT 7 cut(s) 69, 298, 735, 746, 758, 903, 1345
TaqI TCGA 6 cut(s) 201, 224, 288, 740, 1129, 1217
TaqII GACCGA 3 cut(s) 457, 637, 1213
TasI AATT 3 cut(s) 958, 988, 1037
TauI GCSGC 9 cut(s) 195, 329, 345, 403, 442, 506, 518, 565, 684
TfiI GAWTC 2 cut(s) 1118, 1214
TscAI CASTG 3 cut(s) 1078, 1194, 1382
TseFI GTSAC 4 cut(s) 67, 296, 571, 1203
TseI GCWGC 2 cut(s) 907, 1096
Tsp45I GTSAC 4 cut(s) 67, 296, 571, 1203
TspDTI ATGAA 2 cut(s) 1030, 1420
TspGWI ACGGA 3 cut(s) 557, 563, 902
TspRI CASTG 3 cut(s) 1078, 1194, 1382
VpaK11BI GGWCC 7 cut(s) 45, 593, 649, 889, 975, 1030, 1080
XapI RAATTY 2 cut(s) 988, 1037
XbaI TCTAGA 1 cut(s) 1415
XmaJI CCTAGG 1 cut(s) 1307
XmiI GTMKAC 2 cut(s) 24, 740
XspI CTAG 3 cut(s) 1308, 1338, 1416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.