Programmed cell death protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G48390 AT4G24800 AT4G24800 AT4G24800 AT4G24800 AT5G63190 AT5G63190 |
| fragaria_vesca | FvH4_5g07020 |
| malus_domestica | MD06G1160300.v1.1 MD14G1166300.v1.1 |
| prunus_persica | Prupe.5G160100_v2.0.a1 Prupe.5G160100_v2.0.a1 Prupe.5G160100_v2.0.a1 Prupe.5G160100_v2.0.a1 |
| pyrus_communis | pycom14g13890 |
| rosa_chinensis | RchiOBHm_Chr7g0191511 RchiOBHm_Chr7g0191601 RchiOBHm_Chr7g0191611 RchiOBHm_Chr7g0191661 |
| rosa_laevigata | RLG00000004436 RLG00000004439 RLG00000004442 |
| rosa_multiflora | Rmu_sc0001123.1_g000008 Rmu_sc0003634.1_g000005 Rmu_sc0010599.1_g000004 Rmu_sc0010599.1_g000006 Rmu_sc0018698.1_g000001 |
| rosa_roxburghii | Rroxscaffold_157G00438450 Rroxscaffold_157G00438480 Rroxscaffold_3G00263670 Rroxscaffold_3G00263720 |
| rosa_rugosa | Rorug06G0510500 Rorug06G0510700 |
| rosa_samantha | Rh7AG119000 Rh7AG119300 Rh7AG119600 Rh7BG121500 Rh7BG121800 Rh7CG123800 Rh7CG124200 Rh7CG124600 Rh7DG121900 Rh7DG122400 Rh7DG122600 |
| rosa_wichuraiana | Rw7G010200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1845 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1651 |
| AccBSI | CCGCTC | 2 cut(s) | 1455, 1478 |
| AccII | CGCG | 3 cut(s) | 352, 1620, 1875 |
| AclWI | GGATC | 2 cut(s) | 255, 1742 |
| AcoI | YGGCCR | 1 cut(s) | 300 |
| AcsI | RAATTY | 3 cut(s) | 495, 680, 1826 |
| AcuI | CTGAAG | 2 cut(s) | 1749, 1872 |
| AdeI | CACNNNGTG | 1 cut(s) | 1651 |
| AfaI | GTAC | 3 cut(s) | 359, 459, 640 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 309, 552, 1651 |
| AgsI | TTSAA | 7 cut(s) | 224, 688, 838, 1057, 1082, 1130, 1168 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 767, 799 |
| Alw26I | GTCTC | 6 cut(s) | 63, 614, 754, 863, 1064, 1470 |
| AlwI | GGATC | 2 cut(s) | 255, 1742 |
| Ama87I | CYCGRG | 3 cut(s) | 477, 894, 1109 |
| AoxI | GGCC | 2 cut(s) | 300, 480 |
| ApeKI | GCWGC | 3 cut(s) | 230, 1035, 1331 |
| ApoI | RAATTY | 3 cut(s) | 495, 680, 1826 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 498, 887 |
| AspLEI | GCGC | 1 cut(s) | 1846 |
| AspS9I | GGNCC | 1 cut(s) | 480 |
| AsuC2I | CCSGG | 3 cut(s) | 478, 479, 1157 |
| AsuHPI | GGTGA | 4 cut(s) | 366, 434, 593, 719 |
| AvaI | CYCGRG | 3 cut(s) | 477, 894, 1109 |
| BalI | TGGCCA | 1 cut(s) | 302 |
| BauI | CACGAG | 3 cut(s) | 714, 764, 1646 |
| BbsI | GAAGAC | 3 cut(s) | 536, 1272, 1545 |
| BbvI | GCAGC | 3 cut(s) | 217, 1047, 1343 |
| BccI | CCATC | 7 cut(s) | 197, 276, 491, 768, 790, 943, 1457 |
| BceAI | ACGGC | 1 cut(s) | 1618 |
| BclI | TGATCA | 2 cut(s) | 379, 1021 |
| BcnI | CCSGG | 3 cut(s) | 478, 479, 1157 |
| BcoDI | GTCTC | 6 cut(s) | 63, 614, 754, 863, 1064, 1470 |
| BfaI | CTAG | 8 cut(s) | 53, 519, 614, 791, 1358, 1362, 1568, 1625 |
| BfmI | CTRYAG | 2 cut(s) | 846, 1890 |
| BglII | AGATCT | 2 cut(s) | 1407, 1554 |
| BisI | GCNGC | 4 cut(s) | 231, 818, 1036, 1332 |
| BlpI | GCTNAGC | 1 cut(s) | 1456 |
| BlsI | GCNGC | 4 cut(s) | 232, 819, 1037, 1333 |
| BmcAI | AGTACT | 1 cut(s) | 640 |
| Bme1390I | CCNGG | 3 cut(s) | 478, 479, 1157 |
| BmeT110I | CYCGRG | 3 cut(s) | 477, 894, 1109 |
| BmgT120I | GGNCC | 1 cut(s) | 480 |
| BmiI | GGNNCC | 3 cut(s) | 123, 142, 1389 |
| BmrFI | CCNGG | 3 cut(s) | 478, 479, 1157 |
| BmsI | GCATC | 7 cut(s) | 436, 719, 741, 1054, 1343, 1601, 1689 |
| BpiI | GAAGAC | 3 cut(s) | 536, 1272, 1545 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 975, 1007, 1241, 1273, 1482, 1514 |
| BpmI | CTGGAG | 1 cut(s) | 135 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1456 |
| BpuEI | CTTGAG | 2 cut(s) | 431, 534 |
| BpuMI | CCSGG | 3 cut(s) | 478, 479, 1157 |
| Bsa29I | ATCGAT | 2 cut(s) | 195, 1374 |
| BsaBI | GATNNNNATC | 1 cut(s) | 96 |
| BsaI | GGTCTC | 3 cut(s) | 863, 1064, 1470 |
| BsaJI | CCNNGG | 4 cut(s) | 297, 303, 477, 969 |
| BsaWI | WCCGGW | 1 cut(s) | 1436 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 309, 552, 1651 |
| Bse1I | ACTGG | 2 cut(s) | 51, 118 |
| Bse3DI | GCAATG | 1 cut(s) | 1683 |
| Bse8I | GATNNNNATC | 1 cut(s) | 96 |
| BseCI | ATCGAT | 2 cut(s) | 195, 1374 |
| BseDI | CCNNGG | 4 cut(s) | 297, 303, 477, 969 |
| BseGI | GGATG | 7 cut(s) | 223, 268, 809, 930, 1069, 1449, 1704 |
| BseJI | GATNNNNATC | 1 cut(s) | 96 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 309, 552, 1651 |
| BseMI | GCAATG | 1 cut(s) | 1683 |
| BseMII | CTCAG | 2 cut(s) | 1470, 1493 |
| BseNI | ACTGG | 2 cut(s) | 51, 118 |
| BseRI | GAGGAG | 5 cut(s) | 51, 54, 588, 1283, 1602 |
| BseXI | GCAGC | 3 cut(s) | 217, 1047, 1343 |
| BseYI | CCCAGC | 2 cut(s) | 1509, 1527 |
| Bsh1236I | CGCG | 3 cut(s) | 352, 1620, 1875 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1696 |
| BshFI | GGCC | 2 cut(s) | 302, 482 |
| BshVI | ATCGAT | 2 cut(s) | 195, 1374 |
| BsiEI | CGRYCG | 1 cut(s) | 1696 |
| BsiHKCI | CYCGRG | 3 cut(s) | 477, 894, 1109 |
| BsiSI | CCGG | 3 cut(s) | 478, 1157, 1437 |
| BslFI | GGGAC | 1 cut(s) | 787 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 309, 552, 1651 |
| BsmAI | GTCTC | 6 cut(s) | 63, 614, 754, 863, 1064, 1470 |
| BsmFI | GGGAC | 1 cut(s) | 787 |
| BsmI | GAATGC | 3 cut(s) | 34, 541, 1635 |
| BsnI | GGCC | 2 cut(s) | 302, 482 |
| Bso31I | GGTCTC | 3 cut(s) | 863, 1064, 1470 |
| BsoBI | CYCGRG | 3 cut(s) | 477, 894, 1109 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1456 |
| Bsp19I | CCATGG | 2 cut(s) | 297, 303 |
| BspANI | GGCC | 2 cut(s) | 302, 482 |
| BspCNI | CTCAG | 2 cut(s) | 1469, 1494 |
| BspDI | ATCGAT | 2 cut(s) | 195, 1374 |
| BspFNI | CGCG | 3 cut(s) | 352, 1620, 1875 |
| BspLI | GGNNCC | 3 cut(s) | 123, 142, 1389 |
| BspPI | GGATC | 2 cut(s) | 255, 1742 |
| BspTNI | GGTCTC | 3 cut(s) | 863, 1064, 1470 |
| BsrBI | CCGCTC | 2 cut(s) | 1455, 1478 |
| BsrDI | GCAATG | 1 cut(s) | 1683 |
| BsrI | ACTGG | 2 cut(s) | 51, 118 |
| BssECI | CCNNGG | 4 cut(s) | 297, 303, 477, 969 |
| BssSI | CACGAG | 3 cut(s) | 714, 764, 1646 |
| BssT1I | CCWWGG | 3 cut(s) | 297, 303, 969 |
| Bst2BI | CACGAG | 3 cut(s) | 714, 764, 1646 |
| Bst4CI | ACNGT | 2 cut(s) | 652, 1862 |
| Bst6I | CTCTTC | 5 cut(s) | 770, 1245, 1398, 1815, 1848 |
| BstC8I | GCNNGC | 2 cut(s) | 1347, 1848 |
| BstDEI | CTNAG | 5 cut(s) | 568, 1046, 1327, 1456, 1502 |
| BstDSI | CCRYGG | 2 cut(s) | 297, 303 |
| BstF5I | GGATG | 7 cut(s) | 223, 268, 809, 930, 1069, 1449, 1704 |
| BstFNI | CGCG | 3 cut(s) | 352, 1620, 1875 |
| BstHHI | GCGC | 1 cut(s) | 1846 |
| BstMAI | GTCTC | 6 cut(s) | 63, 614, 754, 863, 1064, 1470 |
| BstMCI | CGRYCG | 1 cut(s) | 1696 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1484 |
| BstSCI | CCNGG | 3 cut(s) | 476, 477, 1155 |
| BstSFI | CTRYAG | 2 cut(s) | 846, 1890 |
| BstUI | CGCG | 3 cut(s) | 352, 1620, 1875 |
| BstV1I | GCAGC | 3 cut(s) | 217, 1047, 1343 |
| BstV2I | GAAGAC | 3 cut(s) | 536, 1272, 1545 |
| BstX2I | RGATCY | 3 cut(s) | 247, 1407, 1554 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 304 |
| BstYI | RGATCY | 3 cut(s) | 247, 1407, 1554 |
| Bsu15I | ATCGAT | 2 cut(s) | 195, 1374 |
| BsuRI | GGCC | 2 cut(s) | 302, 482 |
| BsuTUI | ATCGAT | 2 cut(s) | 195, 1374 |
| BtgI | CCRYGG | 2 cut(s) | 297, 303 |
| BtsCI | GGATG | 7 cut(s) | 223, 268, 809, 930, 1069, 1449, 1704 |
| BtsI | GCAGTG | 1 cut(s) | 1539 |
| BtsIMutI | CAGTG | 1 cut(s) | 1539 |
| Cac8I | GCNNGC | 2 cut(s) | 1347, 1848 |
| CfoI | GCGC | 1 cut(s) | 1846 |
| Cfr13I | GGNCC | 1 cut(s) | 480 |
| Cfr9I | CCCGGG | 1 cut(s) | 477 |
| ClaI | ATCGAT | 2 cut(s) | 195, 1374 |
| CseI | GACGC | 1 cut(s) | 1550 |
| Csp6I | GTAC | 3 cut(s) | 358, 458, 639 |
| CviAII | CATG | 4 cut(s) | 298, 304, 1246, 1288 |
| CviQI | GTAC | 3 cut(s) | 358, 458, 639 |
| DdeI | CTNAG | 5 cut(s) | 568, 1046, 1327, 1456, 1502 |
| DraI | TTTAAA | 1 cut(s) | 1009 |
| DraIII | CACNNNGTG | 1 cut(s) | 1651 |
| EaeI | YGGCCR | 1 cut(s) | 300 |
| Eam1104I | CTCTTC | 5 cut(s) | 770, 1245, 1398, 1815, 1848 |
| EarI | CTCTTC | 5 cut(s) | 770, 1245, 1398, 1815, 1848 |
| Eco130I | CCWWGG | 3 cut(s) | 297, 303, 969 |
| Eco31I | GGTCTC | 3 cut(s) | 863, 1064, 1470 |
| Eco32I | GATATC | 3 cut(s) | 675, 1105, 1473 |
| Eco57I | CTGAAG | 2 cut(s) | 1749, 1872 |
| Eco88I | CYCGRG | 3 cut(s) | 477, 894, 1109 |
| EcoRV | GATATC | 3 cut(s) | 675, 1105, 1473 |
| EcoT14I | CCWWGG | 3 cut(s) | 297, 303, 969 |
| EcoT22I | ATGCAT | 2 cut(s) | 734, 1616 |
| ErhI | CCWWGG | 3 cut(s) | 297, 303, 969 |
| FaeI | CATG | 4 cut(s) | 301, 307, 1249, 1291 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1770, 1802 |
| FaqI | GGGAC | 1 cut(s) | 787 |
| FatI | CATG | 4 cut(s) | 297, 303, 1245, 1287 |
| FbaI | TGATCA | 2 cut(s) | 379, 1021 |
| Fnu4HI | GCNGC | 4 cut(s) | 231, 818, 1036, 1332 |
| FokI | GGATG | 7 cut(s) | 230, 255, 796, 917, 1076, 1436, 1711 |
| Fsp4HI | GCNGC | 4 cut(s) | 231, 818, 1036, 1332 |
| FspBI | CTAG | 8 cut(s) | 53, 519, 614, 791, 1358, 1362, 1568, 1625 |
| FspI | TGCGCA | 1 cut(s) | 1845 |
| GlaI | GCGC | 1 cut(s) | 1845 |
| GluI | GCNGC | 4 cut(s) | 231, 818, 1036, 1332 |
| GsaI | CCCAGC | 2 cut(s) | 1513, 1531 |
| GsuI | CTGGAG | 1 cut(s) | 135 |
| HaeIII | GGCC | 2 cut(s) | 302, 482 |
| HapII | CCGG | 3 cut(s) | 478, 1157, 1437 |
| HgaI | GACGC | 1 cut(s) | 1550 |
| HhaI | GCGC | 1 cut(s) | 1846 |
| Hin1II | CATG | 4 cut(s) | 301, 307, 1249, 1291 |
| Hin6I | GCGC | 1 cut(s) | 1844 |
| HinP1I | GCGC | 1 cut(s) | 1844 |
| HindIII | AAGCTT | 1 cut(s) | 720 |
| HpaII | CCGG | 3 cut(s) | 478, 1157, 1437 |
| HphI | GGTGA | 4 cut(s) | 366, 434, 593, 719 |
| Hpy99I | CGWCG | 2 cut(s) | 491, 998 |
| HpyAV | CCTTC | 6 cut(s) | 319, 325, 848, 1054, 1654, 1724 |
| HpyCH4III | ACNGT | 2 cut(s) | 652, 1862 |
| HpyCH4V | TGCA | 7 cut(s) | 32, 131, 732, 1067, 1614, 1714, 1817 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1484 |
| HpyF3I | CTNAG | 5 cut(s) | 568, 1046, 1327, 1456, 1502 |
| Hsp92II | CATG | 4 cut(s) | 301, 307, 1249, 1291 |
| HspAI | GCGC | 1 cut(s) | 1844 |
| Ksp22I | TGATCA | 2 cut(s) | 379, 1021 |
| LmnI | GCTCC | 3 cut(s) | 601, 1296, 1393 |
| Lsp1109I | GCAGC | 3 cut(s) | 217, 1047, 1343 |
| LweI | GCATC | 7 cut(s) | 436, 719, 741, 1054, 1343, 1601, 1689 |
| MaeI | CTAG | 8 cut(s) | 53, 519, 614, 791, 1358, 1362, 1568, 1625 |
| MaeIII | GTNAC | 2 cut(s) | 342, 707 |
| MbiI | CCGCTC | 2 cut(s) | 1455, 1478 |
| MflI | RGATCY | 3 cut(s) | 247, 1407, 1554 |
| MlsI | TGGCCA | 1 cut(s) | 302 |
| MluCI | AATT | 5 cut(s) | 495, 680, 830, 1077, 1826 |
| MluNI | TGGCCA | 1 cut(s) | 302 |
| MlyI | GAGTC | 8 cut(s) | 65, 422, 526, 809, 880, 965, 1491, 1782 |
| Mox20I | TGGCCA | 1 cut(s) | 302 |
| Mph1103I | ATGCAT | 2 cut(s) | 734, 1616 |
| MroXI | GAANNNNTTC | 2 cut(s) | 498, 887 |
| MscI | TGGCCA | 1 cut(s) | 302 |
| MseI | TTAA | 8 cut(s) | 153, 453, 1008, 1395, 1641, 1656, 1704, 1830 |
| MslI | CAYNNNNRTG | 3 cut(s) | 105, 302, 1250 |
| Msp20I | TGGCCA | 1 cut(s) | 302 |
| MspA1I | CMGCKG | 1 cut(s) | 820 |
| MspI | CCGG | 3 cut(s) | 478, 1157, 1437 |
| MspR9I | CCNGG | 3 cut(s) | 478, 479, 1157 |
| Mva1269I | GAATGC | 3 cut(s) | 34, 541, 1635 |
| MvnI | CGCG | 3 cut(s) | 352, 1620, 1875 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1484 |
| NciI | CCSGG | 3 cut(s) | 478, 479, 1157 |
| NcoI | CCATGG | 2 cut(s) | 297, 303 |
| NlaIII | CATG | 4 cut(s) | 301, 307, 1249, 1291 |
| NlaIV | GGNNCC | 3 cut(s) | 123, 142, 1389 |
| NmuCI | GTSAC | 1 cut(s) | 707 |
| NsbI | TGCGCA | 1 cut(s) | 1845 |
| NsiI | ATGCAT | 2 cut(s) | 734, 1616 |
| PctI | GAATGC | 3 cut(s) | 34, 541, 1635 |
| PdmI | GAANNNNTTC | 2 cut(s) | 498, 887 |
| PfeI | GAWTC | 3 cut(s) | 1001, 1298, 1895 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1651 |
| PkrI | GCNGC | 4 cut(s) | 232, 819, 1037, 1333 |
| Ple19I | CGATCG | 1 cut(s) | 1696 |
| PleI | GAGTC | 8 cut(s) | 64, 421, 526, 808, 879, 964, 1491, 1781 |
| PpsI | GAGTC | 8 cut(s) | 64, 421, 526, 808, 879, 964, 1491, 1781 |
| PspFI | CCCAGC | 2 cut(s) | 1509, 1527 |
| PspN4I | GGNNCC | 3 cut(s) | 123, 142, 1389 |
| PspPI | GGNCC | 1 cut(s) | 480 |
| PsuI | RGATCY | 3 cut(s) | 247, 1407, 1554 |
| PvuI | CGATCG | 1 cut(s) | 1696 |
| RsaI | GTAC | 3 cut(s) | 359, 459, 640 |
| RsaNI | GTAC | 3 cut(s) | 358, 458, 639 |
| RseI | CAYNNNNRTG | 3 cut(s) | 105, 302, 1250 |
| SaqAI | TTAA | 8 cut(s) | 153, 453, 1008, 1395, 1641, 1656, 1704, 1830 |
| SatI | GCNGC | 4 cut(s) | 231, 818, 1036, 1332 |
| Sau96I | GGNCC | 1 cut(s) | 480 |
| ScaI | AGTACT | 1 cut(s) | 640 |
| SchI | GAGTC | 8 cut(s) | 65, 422, 526, 809, 880, 965, 1491, 1782 |
| ScrFI | CCNGG | 3 cut(s) | 478, 479, 1157 |
| SfaNI | GCATC | 7 cut(s) | 436, 719, 741, 1054, 1343, 1601, 1689 |
| SfcI | CTRYAG | 2 cut(s) | 846, 1890 |
| SmaI | CCCGGG | 1 cut(s) | 479 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 105, 302, 1250 |
| SmlI | CTYRAG | 2 cut(s) | 410, 549 |
| SmoI | CTYRAG | 2 cut(s) | 410, 549 |
| SrfI | GCCCGGGC | 1 cut(s) | 479 |
| Sse9I | AATT | 5 cut(s) | 495, 680, 830, 1077, 1826 |
| SspMI | CTAG | 8 cut(s) | 53, 519, 614, 791, 1358, 1362, 1568, 1625 |
| StyD4I | CCNGG | 3 cut(s) | 476, 477, 1155 |
| StyI | CCWWGG | 3 cut(s) | 297, 303, 969 |
| TaaI | ACNGT | 2 cut(s) | 652, 1862 |
| TaqII | GACCGA | 1 cut(s) | 1452 |
| TasI | AATT | 5 cut(s) | 495, 680, 830, 1077, 1826 |
| TatI | WGTACW | 2 cut(s) | 457, 638 |
| TauI | GCSGC | 1 cut(s) | 820 |
| TfiI | GAWTC | 3 cut(s) | 1001, 1298, 1895 |
| Tru1I | TTAA | 8 cut(s) | 153, 453, 1008, 1395, 1641, 1656, 1704, 1830 |
| Tru9I | TTAA | 8 cut(s) | 153, 453, 1008, 1395, 1641, 1656, 1704, 1830 |
| TscAI | CASTG | 1 cut(s) | 1539 |
| TseFI | GTSAC | 1 cut(s) | 707 |
| TseI | GCWGC | 3 cut(s) | 230, 1035, 1331 |
| Tsp45I | GTSAC | 1 cut(s) | 707 |
| TspDTI | ATGAA | 6 cut(s) | 41, 213, 507, 705, 1261, 1273 |
| TspGWI | ACGGA | 1 cut(s) | 406 |
| TspMI | CCCGGG | 1 cut(s) | 477 |
| TspRI | CASTG | 1 cut(s) | 1539 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1651 |
| XapI | RAATTY | 3 cut(s) | 495, 680, 1826 |
| XbaI | TCTAGA | 2 cut(s) | 52, 1567 |
| XmaI | CCCGGG | 1 cut(s) | 477 |
| XmnI | GAANNNNTTC | 2 cut(s) | 498, 887 |
| XspI | CTAG | 8 cut(s) | 53, 519, 614, 791, 1358, 1362, 1568, 1625 |
| ZrmI | AGTACT | 1 cut(s) | 640 |
| Zsp2I | ATGCAT | 2 cut(s) | 734, 1616 |