Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0001982

Physical Location & Seq

Genomic Coordinates Forward (+)

57543595 .. 57547312

Gene Structure 3718 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00263670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2115 bp

ATGGCATCAAGTGAGGGATTTTTGACGAATGAGCAGAGGGAAACATTAAAAGTTGCCTGCCAAAATGTGGAGGTTCTGTCATCGTCGCCAAAGTCCCCTACATCTTTCCTGTCTGAACATCATGTGAAAGCCCCTGCTGGTGGTAAGGCTCCAACAGCTGGGATAGCTGTGAGGCATGTGCGGCGGACACACTCAGGGAAGCTTGTGCGGGTTAAAAAGGAAGGAGGAGGTGGCAAGGGCACCTGGGGAAAGCTGCTTGATACTGATGGTGAATCCCATATTGATCGTAATGACCCTAACTATGACAGTGGGGAGGAACCATACCAACTTGTTGGGGCAACTGTAGCGGATCCGTTGGATGAATACAAGAAAACTGTCGCTTCCATCATTGAGGAATACTTCAGCACTGATGATGTGGGACAGGCAGCATCTGACCTCAGAGAACTAAGCTCAAGTCAGTATCATCCTTACTTCATTAAGCGCCTTGTTTCCATGGCAATGGACAGGCATGATAAGGAGAAAGAGATGGCCTCAGTTTTGCTCTCAGCTTTGTATGCTGATGTCATCAGCCCTGCGCAGATTCAAGATGGATTTTATATACTTCTTGATTCTGCTGATGACCTTGCAGTGGACATACTGGATGCAGTAGACATTCTTGCCTTGTTTCTTGCTCGTGCAGTGGTTGATGACATCCTTCCTCCGGCCTTCCTAACAAGGGCAAAGAAAGCACTCCCTGAATCGTCCAAGGGAGTTCAGGTAATTCAGACTGCAGAGAAGAGCTATCTTTCAGCTCCACACCATGCAGAACTTGTGGAGAGGAGGTGGGGCGGTAGCACTCACATAACTGTTGAAGAGGTGAAGAAAAAGATTTCTGATTTGTTGAGAGAATATGTGGAAAGTGGAGACACTCTTGAGGCCTGTAGGTGCATTAGGGAGTTGGGAGTTTCGTTCTATCATCATGAGGTTGTGAAAAGAGCTTTGATTATTGGCATGGAGACTCGGACAACTGAACCACTAATAACGAAGCTATTAAAGGAGGCGGCTGAGGAAGGCATTATTAGTTCCAGTCAGATGGCAAAGGGCTTTTCTCGTTTGGCAGAGAGCCTCGATGACCTTTCTCTTGACATTCCATCAGCAAAAACCTTGTTCCAGTCACTGGTCCCCAAGGCAATATCTGAAGGTTGGCTTGATGATTCATTTGTGGAATCCTTAGGTGAAGATGGTGAGGTGCAACATGGAGATGAAAAGGTGAGGCAGTACAAGAAAGAGATTGTGTCCATAATTCACGAATACTTTCTCTCAGATGATATTCCCGAGCTCATTCAAAGCCTTGAAGATCTTGCGGTACCTGAGTATAATCCCATATTCTTGAAGAAGCTGATCACACTTGCAATGGATAGAAAGAACCGTGAAAAGGAAATGGCATCTGTTCTGCTTTCTGCCCTTCATATTGAGATCTTCTCGACTGAGGACATAGTTAATGGATTTGTCTTGCTTCTGGAATCTGCAGAGGACACGGAATTGGACATCTTGGATGCTTCAAATGAGCTTGCTCTCTTTCTGGCCAGGGCTGTGATCGATGATGTGTTGGCTCCGCTGAATTTGGAAGAAATTGGCAGCAGGTTGCCAGCGAATTGCAGCGCAACTGAGACTGTGCGAATGGCTCAGTCACTGGTTTCTGCTCGTCATGCTGGTGAGAGGCTCCTGAGATGTTGGGGAGGTGGGACTGGCTGGATTGTGGAGGATGCAAAGGACAAGATCACAAAGCTCTTAGAGGAGTATGAAAGTGGGGGTGTCGTGGCTGAAGCCTGCCAGTGCATTCGTGATATCGGAATGCCTTTCTTTAACCATGAGGTGGTGAAGAAGGCGCTGGTTATGGCAATGGAGAAGAAGAATGACAGTATGCTGGATCTGCTTCAGGAGTGCTTCAGCGAAGGACTGATCACAATCAACCAGCTGACCAAAGGCTTCACCCGGATCAAGGAAGGGCTAGATGACTTGGCTCTCGACATTCCAAATGCAAGGGAGAAGTTCAGCTTCTACGTGGAGCACGCACAAGAGAAGGGTTGGCTTTTGCCGACCTTTGGTTCATCTGCCGCGGATGGTTCTCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko05205 ko05206 map05205 map05206

Pfam Domains

Protein Families

MA3

Protein Analysis

704

Amino Acids

77.71

Weight (kDa)

4.91

Isoelectric Point (pI)

44.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MA3	PF02847	123 - 233	7.2e-28	MA3 domain
MA3	PF02847	286 - 397	5.8e-32	MA3 domain
MA3	PF02847	421 - 530	1.6e-27	MA3 domain
MA3	PF02847	584 - 691	1.1e-31	MA3 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001982)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48390 AT4G24800 AT4G24800 AT4G24800 AT4G24800 AT5G63190 AT5G63190
fragaria_vesca	FvH4_5g07020
malus_domestica	MD06G1160300.v1.1 MD14G1166300.v1.1
prunus_persica	Prupe.5G160100_v2.0.a1 Prupe.5G160100_v2.0.a1 Prupe.5G160100_v2.0.a1 Prupe.5G160100_v2.0.a1
pyrus_communis	pycom14g13890
rosa_chinensis	RchiOBHm_Chr7g0191511 RchiOBHm_Chr7g0191601 RchiOBHm_Chr7g0191611 RchiOBHm_Chr7g0191661
rosa_laevigata	RLG00000004436 RLG00000004439 RLG00000004442
rosa_multiflora	Rmu_sc0001123.1_g000008 Rmu_sc0003634.1_g000005 Rmu_sc0010599.1_g000004 Rmu_sc0010599.1_g000006 Rmu_sc0018698.1_g000001
rosa_roxburghii	Rroxscaffold_157G00438450 Rroxscaffold_157G00438480 Rroxscaffold_3G00263670 Rroxscaffold_3G00263720
rosa_rugosa	Rorug06G0510500 Rorug06G0510700
rosa_samantha	Rh7AG119000 Rh7AG119300 Rh7AG119600 Rh7BG121500 Rh7BG121800 Rh7CG123800 Rh7CG124200 Rh7CG124600 Rh7DG121900 Rh7DG122400 Rh7DG122600
rosa_wichuraiana	Rw7G010200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	576
Acc36I	ACCTGC	1 cut(s)	1611
Acc65I	GGTACC	1 cut(s)	1345
AccB1I	GGYRCC	2 cut(s)	239, 1345
AccB7I	CCANNNNNTGG	4 cut(s)	67, 158, 1156, 1855
AccI	GTMKAC	1 cut(s)	648
AccII	CGCG	1 cut(s)	2099
AclWI	GGATC	4 cut(s)	344, 357, 1917, 1985
AcoI	YGGCCR	1 cut(s)	1563
AcsI	RAATTY	1 cut(s)	1600
AcuI	CTGAAG	5 cut(s)	385, 1197, 1824, 1901, 1912
AfaI	GTAC	2 cut(s)	1259, 1347
AgsI	TTSAA	6 cut(s)	584, 851, 1325, 1334, 1372, 1542
AjnI	CCWGG	2 cut(s)	242, 1565
Alw21I	GWGCWC	2 cut(s)	1320, 2052
Alw26I	GTCTC	3 cut(s)	897, 989, 1643
AlwI	GGATC	4 cut(s)	344, 357, 1917, 1985
AlwNI	CAGNNNCTG	3 cut(s)	431, 1156, 1672
Ama87I	CYCGRG	1 cut(s)	1313
AoxI	GGCC	4 cut(s)	528, 702, 915, 1563
ApeKI	GCWGC	4 cut(s)	253, 425, 1617, 1638
ApoI	RAATTY	1 cut(s)	1600
Asp700I	GAANNNNTTC	1 cut(s)	1293
Asp718I	GGTACC	1 cut(s)	1345
AspLEI	GCGC	4 cut(s)	483, 577, 1643, 1870
AspS9I	GGNCC	1 cut(s)	1159
AsuC2I	CCSGG	1 cut(s)	1975
AsuHPI	GGTGA	8 cut(s)	281, 868, 1226, 1235, 1261, 1706, 1870, 1963
AvaI	CYCGRG	1 cut(s)	1313
AvaII	GGWCC	1 cut(s)	1159
AxyI	CCTNAGG	1 cut(s)	1210
BaeGI	GKGCMC	1 cut(s)	242
BaeI	ACNNNNGTAYC	2 cut(s)	1337, 1370
BalI	TGGCCA	1 cut(s)	1565
BamHI	GGATCC	1 cut(s)	349
BanI	GGYRCC	2 cut(s)	239, 1345
BanII	GRGCYC	1 cut(s)	1320
BauI	CACGAG	1 cut(s)	672
Bbv12I	GWGCWC	2 cut(s)	1320, 2052
BbvCI	CCTCAGC	1 cut(s)	1044
BbvI	GCAGC	4 cut(s)	240, 437, 1629, 1650
BccI	CCATC	8 cut(s)	260, 392, 520, 581, 1066, 1138, 1214, 2096
BciT130I	CCWGG	2 cut(s)	244, 1567
BclI	TGATCA	2 cut(s)	1380, 1941
BcnI	CCSGG	1 cut(s)	1975
BcoDI	GTCTC	3 cut(s)	897, 989, 1643
BfaI	CTAG	1 cut(s)	1991
BfmI	CTRYAG	4 cut(s)	342, 768, 919, 1506
BfoI	RGCGCY	2 cut(s)	484, 1871
BfuAI	ACCTGC	1 cut(s)	1611
BglII	AGATCT	2 cut(s)	1336, 1455
BisI	GCNGC	7 cut(s)	182, 254, 426, 1041, 1618, 1639, 2097
BlsI	GCNGC	7 cut(s)	183, 255, 427, 1042, 1619, 1640, 2098
Bme1390I	CCNGG	3 cut(s)	244, 1567, 1975
Bme18I	GGWCC	1 cut(s)	1159
BmeT110I	CYCGRG	1 cut(s)	1313
BmgT120I	GGNCC	1 cut(s)	1159
BmiI	GGNNCC	8 cut(s)	150, 241, 318, 351, 1161, 1347, 1593, 1703
BmrFI	CCNGG	3 cut(s)	244, 1567, 1975
BmsI	GCATC	6 cut(s)	14, 437, 631, 1433, 1525, 1735
BplI	GAGNNNNNCTC	4 cut(s)	515, 547, 1445, 1477
Bpu10I	CCTNAGC	1 cut(s)	1044
BpuEI	CTTGAG	2 cut(s)	436, 932
BpuMI	CCSGG	1 cut(s)	1975
Bsa29I	ATCGAT	1 cut(s)	1578
BsaAI	YACGTR	1 cut(s)	2044
BsaBI	GATNNNNATC	1 cut(s)	1946
BsaJI	CCNNGG	6 cut(s)	243, 492, 744, 1164, 1566, 2097
BsaXI	ACNNNNNCTCC	6 cut(s)	62, 92, 741, 771, 806, 836
Bse1I	ACTGG	7 cut(s)	642, 1065, 1150, 1161, 1677, 1732, 1813
Bse21I	CCTNAGG	1 cut(s)	1210
Bse3DI	GCAATG	3 cut(s)	504, 1398, 1887
Bse8I	GATNNNNATC	1 cut(s)	1946
BseBI	CCWGG	2 cut(s)	244, 1567
BseCI	ATCGAT	1 cut(s)	1578
BseDI	CCNNGG	6 cut(s)	243, 492, 744, 1164, 1566, 2097
BseGI	GGATG	7 cut(s)	364, 463, 646, 690, 1540, 1750, 2107
BseJI	GATNNNNATC	1 cut(s)	1946
BseMI	GCAATG	3 cut(s)	504, 1398, 1887
BseNI	ACTGG	7 cut(s)	642, 1065, 1150, 1161, 1677, 1732, 1813
BseRI	GAGGAG	3 cut(s)	240, 832, 1790
BseSI	GKGCMC	1 cut(s)	242
BseXI	GCAGC	4 cut(s)	240, 437, 1629, 1650
BseYI	CCCAGC	1 cut(s)	158
BsgI	GTGCAG	1 cut(s)	696
Bsh1236I	CGCG	1 cut(s)	2099
BshFI	GGCC	4 cut(s)	530, 704, 917, 1565
BshNI	GGYRCC	2 cut(s)	239, 1345
BshVI	ATCGAT	1 cut(s)	1578
BsiHKAI	GWGCWC	2 cut(s)	1320, 2052
BsiHKCI	CYCGRG	1 cut(s)	1313
BsiSI	CCGG	2 cut(s)	701, 1975
BslFI	GGGAC	4 cut(s)	79, 432, 1145, 1738
BsmAI	GTCTC	3 cut(s)	897, 989, 1643
BsmFI	GGGAC	4 cut(s)	79, 432, 1145, 1738
BsmI	GAATGC	2 cut(s)	1818, 1839
BsnI	GGCC	4 cut(s)	530, 704, 917, 1565
BsoBI	CYCGRG	1 cut(s)	1313
Bsp1286I	GDGCHC	3 cut(s)	242, 1320, 2052
Bsp19I	CCATGG	1 cut(s)	492
BspANI	GGCC	4 cut(s)	530, 704, 917, 1565
BspDI	ATCGAT	1 cut(s)	1578
BspFNI	CGCG	1 cut(s)	2099
BspHI	TCATGA	1 cut(s)	958
BspLI	GGNNCC	8 cut(s)	150, 241, 318, 351, 1161, 1347, 1593, 1703
BspMAI	CTGCAG	2 cut(s)	772, 1510
BspMI	ACCTGC	1 cut(s)	1611
BspPI	GGATC	4 cut(s)	344, 357, 1917, 1985
BspQI	GCTCTTC	1 cut(s)	770
BspT107I	GGYRCC	2 cut(s)	239, 1345
BsrDI	GCAATG	3 cut(s)	504, 1398, 1887
BsrI	ACTGG	7 cut(s)	642, 1065, 1150, 1161, 1677, 1732, 1813
BssECI	CCNNGG	6 cut(s)	243, 492, 744, 1164, 1566, 2097
BssSI	CACGAG	1 cut(s)	672
BssT1I	CCWWGG	3 cut(s)	492, 744, 1164
Bst2BI	CACGAG	1 cut(s)	672
Bst2UI	CCWGG	2 cut(s)	244, 1567
Bst4CI	ACNGT	7 cut(s)	308, 343, 376, 847, 1409, 1654, 1901
Bst6I	CTCTTC	2 cut(s)	770, 846
BstBAI	YACGTR	1 cut(s)	2044
BstC8I	GCNNGC	5 cut(s)	58, 1551, 1629, 1810, 2052
BstDSI	CCRYGG	2 cut(s)	492, 2097
BstF5I	GGATG	7 cut(s)	364, 463, 646, 690, 1540, 1750, 2107
BstFNI	CGCG	1 cut(s)	2099
BstH2I	RGCGCY	2 cut(s)	484, 1871
BstHHI	GCGC	4 cut(s)	483, 577, 1643, 1870
BstMAI	GTCTC	3 cut(s)	897, 989, 1643
BstMWI	GCNNNNNNNGC	8 cut(s)	155, 164, 181, 344, 554, 725, 1688, 1912
BstNI	CCWGG	2 cut(s)	244, 1567
BstNSI	RCATGY	1 cut(s)	179
BstSCI	CCNGG	3 cut(s)	242, 1565, 1973
BstSFI	CTRYAG	4 cut(s)	342, 768, 919, 1506
BstSLI	GKGCMC	1 cut(s)	242
BstUI	CGCG	1 cut(s)	2099
BstV1I	GCAGC	4 cut(s)	240, 437, 1629, 1650
BstX2I	RGATCY	4 cut(s)	349, 1336, 1455, 1909
BstXI	CCANNNNNNTGG	3 cut(s)	332, 499, 1072
BstYI	RGATCY	4 cut(s)	349, 1336, 1455, 1909
Bsu15I	ATCGAT	1 cut(s)	1578
Bsu36I	CCTNAGG	1 cut(s)	1210
BsuRI	GGCC	4 cut(s)	530, 704, 917, 1565
BsuTUI	ATCGAT	1 cut(s)	1578
BtgI	CCRYGG	2 cut(s)	492, 2097
BtsCI	GGATG	7 cut(s)	364, 463, 646, 690, 1540, 1750, 2107
BtsI	GCAGTG	2 cut(s)	633, 684
BtsIMutI	CAGTG	8 cut(s)	313, 405, 633, 684, 1154, 1670, 1820, 2110
BveI	ACCTGC	1 cut(s)	1611
Cac8I	GCNNGC	5 cut(s)	58, 1551, 1629, 1810, 2052
CaiI	CAGNNNCTG	3 cut(s)	431, 1156, 1672
CciI	TCATGA	1 cut(s)	958
CfoI	GCGC	4 cut(s)	483, 577, 1643, 1870
Cfr13I	GGNCC	1 cut(s)	1159
Cfr42I	CCGCGG	1 cut(s)	2100
ClaI	ATCGAT	1 cut(s)	1578
Csp6I	GTAC	2 cut(s)	1258, 1346
CviQI	GTAC	2 cut(s)	1258, 1346
EaeI	YGGCCR	1 cut(s)	1563
Eam1104I	CTCTTC	2 cut(s)	770, 846
EarI	CTCTTC	2 cut(s)	770, 846
EciI	GGCGGA	1 cut(s)	199
Ecl136II	GAGCTC	1 cut(s)	1318
Eco130I	CCWWGG	3 cut(s)	492, 744, 1164
Eco147I	AGGCCT	1 cut(s)	917
Eco24I	GRGCYC	1 cut(s)	1320
Eco32I	GATATC	1 cut(s)	1828
Eco47I	GGWCC	1 cut(s)	1159
Eco53kI	GAGCTC	1 cut(s)	1318
Eco57I	CTGAAG	5 cut(s)	385, 1197, 1824, 1901, 1912
Eco81I	CCTNAGG	1 cut(s)	1210
Eco88I	CYCGRG	1 cut(s)	1313
EcoICRI	GAGCTC	1 cut(s)	1318
EcoRII	CCWGG	2 cut(s)	242, 1565
EcoRV	GATATC	1 cut(s)	1828
EcoT14I	CCWWGG	3 cut(s)	492, 744, 1164
EcoT38I	GRGCYC	1 cut(s)	1320
ErhI	CCWWGG	3 cut(s)	492, 744, 1164
FalI	AAGNNNNNCTT	4 cut(s)	1170, 1202, 2021, 2053
FaqI	GGGAC	4 cut(s)	79, 432, 1145, 1738
FauI	CCCGC	1 cut(s)	201
FbaI	TGATCA	2 cut(s)	1380, 1941
FblI	GTMKAC	1 cut(s)	648
Fnu4HI	GCNGC	7 cut(s)	182, 254, 426, 1041, 1618, 1639, 2097
FokI	GGATG	6 cut(s)	371, 450, 653, 677, 1547, 1757
FriOI	GRGCYC	1 cut(s)	1320
Fsp4HI	GCNGC	7 cut(s)	182, 254, 426, 1041, 1618, 1639, 2097
FspBI	CTAG	1 cut(s)	1991
FspI	TGCGCA	1 cut(s)	576
GlaI	GCGC	4 cut(s)	482, 576, 1642, 1869
GluI	GCNGC	7 cut(s)	182, 254, 426, 1041, 1618, 1639, 2097
GsaI	CCCAGC	1 cut(s)	162
HaeII	RGCGCY	2 cut(s)	484, 1871
HaeIII	GGCC	4 cut(s)	530, 704, 917, 1565
HapII	CCGG	2 cut(s)	701, 1975
HhaI	GCGC	4 cut(s)	483, 577, 1643, 1870
Hin6I	GCGC	4 cut(s)	481, 575, 1641, 1868
HinP1I	GCGC	4 cut(s)	481, 575, 1641, 1868
HindIII	AAGCTT	1 cut(s)	200
HinfI	GANTC	8 cut(s)	272, 580, 608, 737, 997, 1193, 1205, 1502
HpaII	CCGG	2 cut(s)	701, 1975
HphI	GGTGA	8 cut(s)	281, 868, 1226, 1235, 1261, 1706, 1870, 1963
Hpy166II	GTNNAC	2 cut(s)	631, 649
Hpy8I	GTNNAC	2 cut(s)	631, 649
Hpy99I	CGWCG	1 cut(s)	88
HpyCH4III	ACNGT	7 cut(s)	308, 343, 376, 847, 1409, 1654, 1901
HpyCH4IV	ACGT	1 cut(s)	2043
HpyF10VI	GCNNNNNNNGC	8 cut(s)	155, 164, 181, 344, 554, 725, 1688, 1912
HpySE526I	ACGT	1 cut(s)	2043
HspAI	GCGC	4 cut(s)	481, 575, 1641, 1868
KpnI	GGTACC	1 cut(s)	1349
Ksp22I	TGATCA	2 cut(s)	1380, 1941
KspI	CCGCGG	1 cut(s)	2100
LguI	GCTCTTC	1 cut(s)	770
LmnI	GCTCC	5 cut(s)	154, 796, 1597, 1707, 2047
Lsp1109I	GCAGC	4 cut(s)	240, 437, 1629, 1650
LweI	GCATC	6 cut(s)	14, 437, 631, 1433, 1525, 1735
MaeI	CTAG	1 cut(s)	1991
MaeII	ACGT	1 cut(s)	2043
MaeIII	GTNAC	2 cut(s)	1152, 1668
MflI	RGATCY	4 cut(s)	349, 1336, 1455, 1909
MhlI	GDGCHC	3 cut(s)	242, 1320, 2052
MlsI	TGGCCA	1 cut(s)	1565
MluCI	AATT	6 cut(s)	759, 1281, 1520, 1600, 1611, 1633
MluNI	TGGCCA	1 cut(s)	1565
MlyI	GAGTC	1 cut(s)	991
MmeI	TCCRAC	2 cut(s)	176, 336
Mox20I	TGGCCA	1 cut(s)	1565
MroXI	GAANNNNTTC	1 cut(s)	1293
MscI	TGGCCA	1 cut(s)	1565
MseI	TTAA	6 cut(s)	47, 213, 477, 1031, 1479, 1845
MslI	CAYNNNNRTG	3 cut(s)	497, 1239, 1692
Msp20I	TGGCCA	1 cut(s)	1565
MspA1I	CMGCKG	4 cut(s)	158, 1597, 1957, 2099
MspI	CCGG	2 cut(s)	701, 1975
MspR9I	CCNGG	3 cut(s)	244, 1567, 1975
Mva1269I	GAATGC	2 cut(s)	1818, 1839
MvaI	CCWGG	2 cut(s)	244, 1567
MvnI	CGCG	1 cut(s)	2099
MwoI	GCNNNNNNNGC	8 cut(s)	155, 164, 181, 344, 554, 725, 1688, 1912
NciI	CCSGG	1 cut(s)	1975
NcoI	CCATGG	1 cut(s)	492
NlaIV	GGNNCC	8 cut(s)	150, 241, 318, 351, 1161, 1347, 1593, 1703
NmuCI	GTSAC	2 cut(s)	1152, 1668
NsbI	TGCGCA	1 cut(s)	576
NspI	RCATGY	1 cut(s)	179
PagI	TCATGA	1 cut(s)	958
PceI	AGGCCT	1 cut(s)	917
PciSI	GCTCTTC	1 cut(s)	770
PctI	GAATGC	2 cut(s)	1818, 1839
PdmI	GAANNNNTTC	1 cut(s)	1293
PfeI	GAWTC	7 cut(s)	272, 580, 608, 737, 1193, 1205, 1502
PflMI	CCANNNNNTGG	4 cut(s)	67, 158, 1156, 1855
PkrI	GCNGC	7 cut(s)	183, 255, 427, 1042, 1619, 1640, 2098
PleI	GAGTC	1 cut(s)	991
PpsI	GAGTC	1 cut(s)	991
Ppu21I	YACGTR	1 cut(s)	2044
Psp124BI	GAGCTC	1 cut(s)	1320
Psp6I	CCWGG	2 cut(s)	242, 1565
PspFI	CCCAGC	1 cut(s)	158
PspGI	CCWGG	2 cut(s)	242, 1565
PspN4I	GGNNCC	8 cut(s)	150, 241, 318, 351, 1161, 1347, 1593, 1703
PspPI	GGNCC	1 cut(s)	1159
PstI	CTGCAG	2 cut(s)	772, 1510
PstNI	CAGNNNCTG	3 cut(s)	431, 1156, 1672
PsuI	RGATCY	4 cut(s)	349, 1336, 1455, 1909
PvuII	CAGCTG	2 cut(s)	158, 1957
RsaI	GTAC	2 cut(s)	1259, 1347
RsaNI	GTAC	2 cut(s)	1258, 1346
RseI	CAYNNNNRTG	3 cut(s)	497, 1239, 1692
SacI	GAGCTC	1 cut(s)	1320
SacII	CCGCGG	1 cut(s)	2100
SapI	GCTCTTC	1 cut(s)	770
SaqAI	TTAA	6 cut(s)	47, 213, 477, 1031, 1479, 1845
SatI	GCNGC	7 cut(s)	182, 254, 426, 1041, 1618, 1639, 2097
Sau96I	GGNCC	1 cut(s)	1159
SchI	GAGTC	1 cut(s)	991
ScrFI	CCNGG	3 cut(s)	244, 1567, 1975
SduI	GDGCHC	3 cut(s)	242, 1320, 2052
SfaNI	GCATC	6 cut(s)	14, 437, 631, 1433, 1525, 1735
SfcI	CTRYAG	4 cut(s)	342, 768, 919, 1506
Sfr303I	CCGCGG	1 cut(s)	2100
SgrBI	CCGCGG	1 cut(s)	2100
SinI	GGWCC	1 cut(s)	1159
SmiMI	CAYNNNNRTG	3 cut(s)	497, 1239, 1692
SmlI	CTYRAG	2 cut(s)	451, 911
SmoI	CTYRAG	2 cut(s)	451, 911
Sse9I	AATT	6 cut(s)	759, 1281, 1520, 1600, 1611, 1633
SseBI	AGGCCT	1 cut(s)	917
SspMI	CTAG	1 cut(s)	1991
SstI	GAGCTC	1 cut(s)	1320
StuI	AGGCCT	1 cut(s)	917
StyD4I	CCNGG	3 cut(s)	242, 1565, 1973
StyI	CCWWGG	3 cut(s)	492, 744, 1164
TaaI	ACNGT	7 cut(s)	308, 343, 376, 847, 1409, 1654, 1901
TaiI	ACGT	1 cut(s)	2046
TaqI	TCGA	4 cut(s)	1107, 1463, 1578, 2007
TasI	AATT	6 cut(s)	759, 1281, 1520, 1600, 1611, 1633
TatI	WGTACW	1 cut(s)	1257
TauI	GCSGC	3 cut(s)	184, 1043, 2099
TfiI	GAWTC	7 cut(s)	272, 580, 608, 737, 1193, 1205, 1502
Tru1I	TTAA	6 cut(s)	47, 213, 477, 1031, 1479, 1845
Tru9I	TTAA	6 cut(s)	47, 213, 477, 1031, 1479, 1845
TscAI	CASTG	7 cut(s)	313, 412, 633, 684, 1161, 1677, 1820
TseFI	GTSAC	2 cut(s)	1152, 1668
TseI	GCWGC	4 cut(s)	253, 425, 1617, 1638
Tsp45I	GTSAC	2 cut(s)	1152, 1668
TspDTI	ATGAA	7 cut(s)	375, 463, 1185, 1257, 1436, 1797, 2079
TspGWI	ACGGA	2 cut(s)	342, 1532
TspRI	CASTG	7 cut(s)	313, 412, 633, 684, 1161, 1677, 1820
Van91I	CCANNNNNTGG	4 cut(s)	67, 158, 1156, 1855
VpaK11BI	GGWCC	1 cut(s)	1159
XapI	RAATTY	1 cut(s)	1600
XceI	RCATGY	1 cut(s)	179
XmiI	GTMKAC	1 cut(s)	648
XmnI	GAANNNNTTC	1 cut(s)	1293
XspI	CTAG	1 cut(s)	1991

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.