Programmed cell death protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G48390 AT4G24800 AT4G24800 AT4G24800 AT4G24800 AT5G63190 AT5G63190 |
| fragaria_vesca | FvH4_5g07020 |
| malus_domestica | MD06G1160300.v1.1 MD14G1166300.v1.1 |
| prunus_persica | Prupe.5G160100_v2.0.a1 Prupe.5G160100_v2.0.a1 Prupe.5G160100_v2.0.a1 Prupe.5G160100_v2.0.a1 |
| pyrus_communis | pycom14g13890 |
| rosa_chinensis | RchiOBHm_Chr7g0191511 RchiOBHm_Chr7g0191601 RchiOBHm_Chr7g0191611 RchiOBHm_Chr7g0191661 |
| rosa_laevigata | RLG00000004436 RLG00000004439 RLG00000004442 |
| rosa_multiflora | Rmu_sc0001123.1_g000008 Rmu_sc0003634.1_g000005 Rmu_sc0010599.1_g000004 Rmu_sc0010599.1_g000006 Rmu_sc0018698.1_g000001 |
| rosa_roxburghii | Rroxscaffold_157G00438450 Rroxscaffold_157G00438480 Rroxscaffold_3G00263670 Rroxscaffold_3G00263720 |
| rosa_rugosa | Rorug06G0510500 Rorug06G0510700 |
| rosa_samantha | Rh7AG119000 Rh7AG119300 Rh7AG119600 Rh7BG121500 Rh7BG121800 Rh7CG123800 Rh7CG124200 Rh7CG124600 Rh7DG121900 Rh7DG122400 Rh7DG122600 |
| rosa_wichuraiana | Rw7G010200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 217 |
| AccB1I | GGYRCC | 1 cut(s) | 217 |
| AciI | CCGC | 1 cut(s) | 215 |
| AdeI | CACNNNGTG | 1 cut(s) | 71 |
| AfaI | GTAC | 2 cut(s) | 131, 219 |
| AgsI | TTSAA | 5 cut(s) | 83, 89, 197, 206, 244 |
| AjnI | CCWGG | 1 cut(s) | 58 |
| AluBI | AGCT | 3 cut(s) | 92, 121, 190 |
| AluI | AGCT | 3 cut(s) | 92, 121, 190 |
| Alw21I | GWGCWC | 1 cut(s) | 67 |
| Alw26I | GTCTC | 1 cut(s) | 43 |
| Alw44I | GTGCAC | 1 cut(s) | 63 |
| ApaLI | GTGCAC | 1 cut(s) | 63 |
| Asp718I | GGTACC | 1 cut(s) | 217 |
| AsuHPI | GGTGA | 1 cut(s) | 86 |
| BaeGI | GKGCMC | 1 cut(s) | 67 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 209, 242 |
| BanI | GGYRCC | 1 cut(s) | 217 |
| Bbv12I | GWGCWC | 1 cut(s) | 67 |
| BbvCI | CCTCAGC | 1 cut(s) | 122 |
| BccI | CCATC | 2 cut(s) | 20, 170 |
| BciT130I | CCWGG | 1 cut(s) | 60 |
| BciVI | GTATCC | 1 cut(s) | 39 |
| BcoDI | GTCTC | 1 cut(s) | 43 |
| BfuI | GTATCC | 1 cut(s) | 39 |
| BglII | AGATCT | 1 cut(s) | 208 |
| Bme1390I | CCNGG | 1 cut(s) | 60 |
| BmiI | GGNNCC | 1 cut(s) | 219 |
| BmrFI | CCNGG | 1 cut(s) | 60 |
| Bpu10I | CCTNAGC | 1 cut(s) | 122 |
| BpuEI | CTTGAG | 1 cut(s) | 170 |
| BseBI | CCWGG | 1 cut(s) | 60 |
| BseGI | GGATG | 1 cut(s) | 181 |
| BseMII | CTCAG | 2 cut(s) | 113, 213 |
| BseSI | GKGCMC | 1 cut(s) | 67 |
| BshNI | GGYRCC | 1 cut(s) | 217 |
| BsiHKAI | GWGCWC | 1 cut(s) | 67 |
| BsmAI | GTCTC | 1 cut(s) | 43 |
| Bsp1286I | GDGCHC | 1 cut(s) | 67 |
| Bsp143I | GATC | 1 cut(s) | 208 |
| BspACI | CCGC | 1 cut(s) | 215 |
| BspCNI | CTCAG | 2 cut(s) | 114, 214 |
| BspLI | GGNNCC | 1 cut(s) | 219 |
| BspT107I | GGYRCC | 1 cut(s) | 217 |
| BssMI | GATC | 1 cut(s) | 208 |
| Bst2UI | CCWGG | 1 cut(s) | 60 |
| Bst4CI | ACNGT | 1 cut(s) | 19 |
| BstDEI | CTNAG | 2 cut(s) | 122, 222 |
| BstF5I | GGATG | 1 cut(s) | 181 |
| BstKTI | GATC | 1 cut(s) | 211 |
| BstMAI | GTCTC | 1 cut(s) | 43 |
| BstMBI | GATC | 1 cut(s) | 208 |
| BstNI | CCWGG | 1 cut(s) | 60 |
| BstSCI | CCNGG | 1 cut(s) | 58 |
| BstSLI | GKGCMC | 1 cut(s) | 67 |
| BstX2I | RGATCY | 1 cut(s) | 208 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 19 |
| BstYI | RGATCY | 1 cut(s) | 208 |
| BsuI | GTATCC | 1 cut(s) | 39 |
| BtsCI | GGATG | 1 cut(s) | 181 |
| BtsIMutI | CAGTG | 1 cut(s) | 24 |
| Csp6I | GTAC | 2 cut(s) | 130, 218 |
| CviAII | CATG | 1 cut(s) | 68 |
| CviJI | RGCY | 4 cut(s) | 92, 121, 190, 201 |
| CviKI_1 | RGCY | 4 cut(s) | 92, 121, 190, 201 |
| CviQI | GTAC | 2 cut(s) | 130, 218 |
| DdeI | CTNAG | 2 cut(s) | 122, 222 |
| DpnI | GATC | 1 cut(s) | 210 |
| DpnII | GATC | 1 cut(s) | 208 |
| DraIII | CACNNNGTG | 1 cut(s) | 71 |
| EcoRII | CCWGG | 1 cut(s) | 58 |
| FaeI | CATG | 1 cut(s) | 71 |
| FaiI | YATR | 4 cut(s) | 69, 155, 228, 236 |
| FatI | CATG | 1 cut(s) | 67 |
| FokI | GGATG | 1 cut(s) | 188 |
| Hin1II | CATG | 1 cut(s) | 71 |
| HindIII | AAGCTT | 1 cut(s) | 188 |
| HphI | GGTGA | 1 cut(s) | 86 |
| Hpy166II | GTNNAC | 1 cut(s) | 65 |
| Hpy188I | TCNGA | 2 cut(s) | 106, 175 |
| Hpy8I | GTNNAC | 1 cut(s) | 65 |
| HpyCH4III | ACNGT | 1 cut(s) | 19 |
| HpyCH4V | TGCA | 2 cut(s) | 65, 263 |
| HpyF3I | CTNAG | 2 cut(s) | 122, 222 |
| Hsp92II | CATG | 1 cut(s) | 71 |
| KpnI | GGTACC | 1 cut(s) | 221 |
| Kzo9I | GATC | 1 cut(s) | 208 |
| LpnPI | CCDG | 5 cut(s) | 45, 45, 72, 146, 234 |
| MalI | GATC | 1 cut(s) | 210 |
| MboI | GATC | 1 cut(s) | 208 |
| MboII | GAAGA | 2 cut(s) | 218, 256 |
| MflI | RGATCY | 1 cut(s) | 208 |
| MhlI | GDGCHC | 1 cut(s) | 67 |
| MnlI | CCTC | 4 cut(s) | 18, 66, 70, 117 |
| MseI | TTAA | 1 cut(s) | 96 |
| MslI | CAYNNNNRTG | 2 cut(s) | 17, 72 |
| MspR9I | CCNGG | 1 cut(s) | 60 |
| MvaI | CCWGG | 1 cut(s) | 60 |
| NdeII | GATC | 1 cut(s) | 208 |
| NlaIII | CATG | 1 cut(s) | 71 |
| NlaIV | GGNNCC | 1 cut(s) | 219 |
| Psp6I | CCWGG | 1 cut(s) | 58 |
| PspGI | CCWGG | 1 cut(s) | 58 |
| PspN4I | GGNNCC | 1 cut(s) | 219 |
| PsuI | RGATCY | 1 cut(s) | 208 |
| RsaI | GTAC | 2 cut(s) | 131, 219 |
| RsaNI | GTAC | 2 cut(s) | 130, 218 |
| RseI | CAYNNNNRTG | 2 cut(s) | 17, 72 |
| SaqAI | TTAA | 1 cut(s) | 96 |
| Sau3AI | GATC | 1 cut(s) | 208 |
| ScrFI | CCNGG | 1 cut(s) | 60 |
| SduI | GDGCHC | 1 cut(s) | 67 |
| SetI | ASST | 8 cut(s) | 29, 58, 81, 94, 102, 123, 192, 223 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 17, 72 |
| SmlI | CTYRAG | 1 cut(s) | 185 |
| SmoI | CTYRAG | 1 cut(s) | 185 |
| SsiI | CCGC | 1 cut(s) | 215 |
| StyD4I | CCNGG | 1 cut(s) | 58 |
| TaaI | ACNGT | 1 cut(s) | 19 |
| Tru1I | TTAA | 1 cut(s) | 96 |
| Tru9I | TTAA | 1 cut(s) | 96 |
| TscAI | CASTG | 1 cut(s) | 24 |
| TspDTI | ATGAA | 1 cut(s) | 129 |
| TspRI | CASTG | 1 cut(s) | 24 |
| VneI | GTGCAC | 1 cut(s) | 63 |