AT3G60380

BEST Arabidopsis thaliana protein match is hydroxyproline-rich glycoprotein family protein (TAIR AT4G16790.1)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0009037
Physical Location & Seq
Reverse (-)
22316771 .. 22319628
2858 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G60380.1

Sequence Viewer

Length: 2232 bp
ATGGCGTCTCCAAATCCCTACACCAAGCGCCGCTCTCCGCCGAATGTCGTTGTACCGCCACAGCCTCGGTATAAATCCATAGGAGGAGGAGGATTTTTCTGTAAGTCTGTTCTATTCGCTCTTTTTCTCCTCGCCTTGCCGTTGTTCCCTTCTCAAGCTCCTGATTTCGTCGGTGAGACTGTGCTCACTAAGTTCTGGGAACTGATTCATCTCCTATTCGTCGGCATTGCTGTTGCTTATGGTTTGTTTAGCCGTAGGAATGTTGAATCCGCTGTTGATTTAAGGATGACTCGTGTAGATGAGTCTTCTTTGTCTTATGTATCTAGAATCTTCCAGGTTTCTTCTGTTTTTGACGAAGAGTTTGATGATAATTCTTGTGAGTTTGTTGATGTGAGGAGTGATGAGAGTGTGAGTGCTCGAGCTTCTGTGGTTGGGAAATCTGAGTCTTTTGTTGTTGAAAGCGGCGAATTGGAAGAATCGTCTGAATTTGGTGAAACTAATGAAGTCCGAGCTTGGAATTCGCAGTATTTCCAGGGTAAGTCTAAGGTTGTGGTTGCTCGACCTGCTTATGGTCTTGATGGTCACGTTGTGCATCAGCCATTAGGCTTGCCTATTAGGAGGTTAAGGTCATCTTTGAGAGATAATGCTGCTCTTCAAGACAAATCTTTTGCTGATAGCTGTGATGGAGCTGTTAATGCGGAAGCTGAGTCATTATTGGCTGATAATTTTTTTGATGAGGTCTTGGCTGCTCCGGCTTCACCTGTTCCATGGCAAGCTAGACCTGAAATGATGGGAATCGGTGACAACTATCCTTCAAATTTCCAGCCTATATCTGTGGATGAAACCCTTAAATCGATATCTTCTCGGTCTACTGGTTCTTCTTCATCTCAAACTAGTTATGCATCCCAGAATCAGAACAGATTCTCTCCTTCTCGATCTGTTTCCGCAGAGTCACTAAACTCAAATGTGGAAGAGTTGGTCAAGGAGAAGAGTCGCCAGAGTTCATCACGGTCTAGTTCGCCATCCTTGCCCCCATCACCTTCACTGTCTCCATCTCCACCATCGCCAGAATTAGTGCCCAATGATACTCGCAGACGTTCGCCAGAATTAGTAACCGATGATACTCCCAGGCGTGCGTCACATTCTCGGCATTATAGTGATGGTTCCTTGTTAGAGGAAGATGTAAGGCGGGGGTTTGAAAATGAGTTGGAGGGGAGTAAAGTCAGAGGCAGAAAAGCAGAATTCTTCAGTAAGAAGGAACGGGGATCTAAATCACTTAATTTGGCAGCTGAAAGTTCCCGGAGAGGGAACAAGTCTCGCAGATCCTATCCTCCTGAGTCTATCTCATCTCCCGTTGGTGGTGCTGATGACTCCACAACTAGAAGACAAGATCTTCAGCAAAAGAGTAATTGTCATTTGCTTGAAGAAAATATCAGGAAAGGAGTGGAAGCTGACCATAACAATCTGAGGGTCAAAAAGGGAAGGAGTCACGACTCTTTGGAGCTAACAGCAGAAGATTCTGCAAAAGATGAGAAGGTCAGTGAATCTTTTCCTGCTCTTGATGTAGTGTTCCAACCAACAAATGCTAAAGCTTCAAGGCGCGCCATGCGTTCTTCACGAGGGGGACGTGACACTTTGCCGGAGAAGGATGTTGTCACCAGAAAATTAGAGGATGACACTGTGGATTCGGATAAGTCCAGGAAAAAGGACCTTCCTGGTAAAGACAAGGAAATGAAATTAGACGGTCCAAGAATTGAACCACGTTCTTGGAGAGCTTCCAGTAATGTATCACTGAGAGGAAAGTCCGTGAGGACCATAAGATCTGATCGTCATGGGAAAGATGTAAAGACAGATGGAGATTCATCTGAGGATCGGGCAGAAGCTAAAGTAGAAAGCCGAGGAAGAACGAAATCGAGAAGACCACGACAAGAAGAACTATCGATTGTACTACACCAGGAGAAAAGTTCAGAAACTCGCGCTAAATCCGAGCCAGAAGAGGTTGCTATGGAAGAGCCCCAGGCCGAGCAGCAACCTGAAGTAACTTTCGAAGAGGAGGAAGAAGCTGCTTGGGAAAGCCAAAGCAATGCAAGCCATGATCATAATGAGGTTGATAGAAAAGCCGGTGAGTTCATAGCCAAATTCCGAGAACAAATTAGGTTGCAGAAACTCATATCCGGTGAACAACCTAGAGGAGGAGGCACTGGTATTTTCAGAAACAGCCAATTCAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF761

Protein Analysis

743

Amino Acids

82.64

Weight (kDa)

6.19

Isoelectric Point (pI)

72.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF761 PF05553 700 - 725 6.4e-10 Cotton fibre expressed protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 571
AccBSI CCGCTC 1 cut(s) 33
AccI GTMKAC 1 cut(s) 869
AccII CGCG 2 cut(s) 1602, 1977
AciI CCGC 8 cut(s) 31, 38, 56, 270, 462, 698, 945, 1189
AclWI GGATC 3 cut(s) 1273, 1317, 1878
AcsI RAATTY 5 cut(s) 485, 517, 817, 1241, 2138
AcuI CTGAAG 3 cut(s) 1231, 1379, 2055
AcyI GRCGYC 1 cut(s) 5
AdeI CACNNNGTG 1 cut(s) 589
AfaI GTAC 2 cut(s) 54, 1947
AfiI CCNNNNNNNGG 4 cut(s) 569, 1305, 1358, 2192
AgsI TTSAA 8 cut(s) 266, 458, 656, 816, 1199, 1424, 1596, 1757
AhlI ACTAGT 1 cut(s) 893
AjiI CACGTC 1 cut(s) 1628
AjnI CCWGG 7 cut(s) 333, 531, 1127, 1697, 1714, 1953, 2016
Alw21I GWGCWC 2 cut(s) 186, 418
Alw26I GTCTC 4 cut(s) 12, 170, 1053, 1320
AlwI GGATC 3 cut(s) 1273, 1317, 1878
Ama87I CYCGRG 1 cut(s) 417
AoxI GGCC 1 cut(s) 2019
ApeKI GCWGC 5 cut(s) 647, 746, 1286, 2026, 2063
ApoI RAATTY 5 cut(s) 485, 517, 817, 1241, 2138
ArsI GACNNNNNNTTYG 4 cut(s) 344, 376, 650, 682
AscI GGCGCGCC 1 cut(s) 1600
Asp700I GAANNNNTTC 3 cut(s) 204, 920, 1548
AspLEI GCGC 4 cut(s) 30, 1602, 1604, 1979
AspS9I GGNCC 3 cut(s) 1708, 1745, 1812
AsuC2I CCSGG 1 cut(s) 1300
AsuHPI GGTGA 8 cut(s) 185, 503, 750, 812, 1029, 1648, 2135, 2189
AsuII TTCGAA 1 cut(s) 2046
AvaI CYCGRG 1 cut(s) 417
AvaII GGWCC 3 cut(s) 1708, 1745, 1812
BaeGI GKGCMC 1 cut(s) 1080
BanII GRGCYC 1 cut(s) 2016
BauI CACGAG 2 cut(s) 291, 1617
BbsI GAAGAC 3 cut(s) 297, 1390, 1924
Bbv12I GWGCWC 2 cut(s) 186, 418
BbvI GCAGC 5 cut(s) 634, 733, 1298, 2038, 2050
BccI CCATC 9 cut(s) 572, 677, 784, 1030, 1042, 1060, 1069, 1154, 1847
BceAI ACGGC 2 cut(s) 124, 237
BciT130I CCWGG 7 cut(s) 335, 533, 1129, 1699, 1716, 1955, 2018
BclI TGATCA 1 cut(s) 2095
BcnI CCSGG 1 cut(s) 1300
BcoDI GTCTC 4 cut(s) 12, 170, 1053, 1320
BcuI ACTAGT 1 cut(s) 893
BfaI CTAG 6 cut(s) 324, 777, 894, 1014, 1380, 2187
BfoI RGCGCY 1 cut(s) 31
BfuAI ACCTGC 1 cut(s) 571
BglII AGATCT 2 cut(s) 1390, 1820
BisI GCNGC 7 cut(s) 31, 463, 648, 747, 1287, 2027, 2064
BlsI GCNGC 7 cut(s) 32, 464, 649, 748, 1288, 2028, 2065
Bme1390I CCNGG 8 cut(s) 335, 533, 1129, 1300, 1699, 1716, 1955, 2018
Bme18I GGWCC 3 cut(s) 1708, 1745, 1812
BmeT110I CYCGRG 1 cut(s) 417
BmgBI CACGTC 1 cut(s) 1628
BmgT120I GGNCC 3 cut(s) 1708, 1745, 1812
BmiI GGNNCC 1 cut(s) 1165
BmrFI CCNGG 8 cut(s) 335, 533, 1129, 1300, 1699, 1716, 1955, 2018
BmsI GCATC 2 cut(s) 601, 911
BpiI GAAGAC 3 cut(s) 297, 1390, 1924
BplI GAGNNNNNCTC 2 cut(s) 1328, 1360
Bpu14I TTCGAA 1 cut(s) 2046
BpuEI CTTGAG 1 cut(s) 138
BpuMI CCSGG 1 cut(s) 1300
Bsa29I ATCGAT 2 cut(s) 854, 1940
BsaBI GATNNNNATC 2 cut(s) 794, 1270
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 6 cut(s) 65, 532, 767, 1127, 1897, 2016
BsaWI WCCGGW 1 cut(s) 2174
Bsc4I CCNNNNNNNGG 4 cut(s) 569, 1305, 1358, 2192
Bse118I RCCGGY 1 cut(s) 2120
Bse1I ACTGG 3 cut(s) 877, 1779, 2206
Bse3DI GCAATG 2 cut(s) 225, 2089
Bse8I GATNNNNATC 2 cut(s) 794, 1270
BseBI CCWGG 7 cut(s) 335, 533, 1129, 1699, 1716, 1955, 2018
BseCI ATCGAT 2 cut(s) 854, 1940
BseDI CCNNGG 6 cut(s) 65, 532, 767, 1127, 1897, 2016
BseGI GGATG 6 cut(s) 291, 844, 902, 1022, 1654, 1678
BseJI GATNNNNATC 2 cut(s) 794, 1270
BseLI CCNNNNNNNGG 4 cut(s) 569, 1305, 1358, 2192
BseMI GCAATG 2 cut(s) 225, 2089
BseMII CTCAG 6 cut(s) 432, 696, 1326, 1457, 1784, 1857
BseNI ACTGG 3 cut(s) 877, 1779, 2206
BsePI GCGCGC 1 cut(s) 1600
BseRI GAGGAG 7 cut(s) 99, 102, 119, 409, 2066, 2205, 2208
BseSI GKGCMC 1 cut(s) 1080
BseXI GCAGC 5 cut(s) 634, 733, 1298, 2038, 2050
Bsh1236I CGCG 2 cut(s) 1602, 1977
BshFI GGCC 1 cut(s) 2021
BshVI ATCGAT 2 cut(s) 854, 1940
BsiHKAI GWGCWC 2 cut(s) 186, 418
BsiHKCI CYCGRG 1 cut(s) 417
BsiSI CCGG 5 cut(s) 752, 1300, 1640, 2121, 2175
BslFI GGGAC 1 cut(s) 1638
BslI CCNNNNNNNGG 4 cut(s) 569, 1305, 1358, 2192
BsmAI GTCTC 4 cut(s) 12, 170, 1053, 1320
BsmBI CGTCTC 1 cut(s) 12
BsmFI GGGAC 1 cut(s) 1638
BsnI GGCC 1 cut(s) 2021
BsoBI CYCGRG 1 cut(s) 417
Bsp119I TTCGAA 1 cut(s) 2046
Bsp1286I GDGCHC 4 cut(s) 186, 418, 1080, 2016
Bsp143I GATC 8 cut(s) 935, 1265, 1322, 1390, 1820, 1825, 1870, 2095
Bsp19I CCATGG 1 cut(s) 767
BspACI CCGC 8 cut(s) 31, 38, 56, 270, 462, 698, 945, 1189
BspANI GGCC 1 cut(s) 2021
BspCNI CTCAG 6 cut(s) 433, 697, 1327, 1458, 1785, 1858
BspDI ATCGAT 2 cut(s) 854, 1940
BspFNI CGCG 2 cut(s) 1602, 1977
BspLI GGNNCC 1 cut(s) 1165
BspMI ACCTGC 1 cut(s) 571
BspPI GGATC 3 cut(s) 1273, 1317, 1878
BspQI GCTCTTC 2 cut(s) 657, 2004
BspT104I TTCGAA 1 cut(s) 2046
BsrBI CCGCTC 1 cut(s) 33
BsrDI GCAATG 2 cut(s) 225, 2089
BsrFI RCCGGY 1 cut(s) 2120
BsrI ACTGG 3 cut(s) 877, 1779, 2206
BssAI RCCGGY 1 cut(s) 2120
BssECI CCNNGG 6 cut(s) 65, 532, 767, 1127, 1897, 2016
BssHII GCGCGC 1 cut(s) 1600
BssMI GATC 8 cut(s) 935, 1265, 1322, 1390, 1820, 1825, 1870, 2095
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 2 cut(s) 291, 1617
BssT1I CCWWGG 1 cut(s) 767
Bst2BI CACGAG 2 cut(s) 291, 1617
Bst2UI CCWGG 7 cut(s) 335, 533, 1129, 1699, 1716, 1955, 2018
Bst4CI ACNGT 5 cut(s) 181, 1011, 1047, 1681, 1745
Bst6I CTCTTC 7 cut(s) 351, 657, 966, 983, 1989, 2004, 2043
BstACI GRCGYC 1 cut(s) 5
BstBI TTCGAA 1 cut(s) 2046
BstC8I GCNNGC 5 cut(s) 608, 774, 1134, 1602, 2089
BstDEI CTNAG 8 cut(s) 189, 441, 543, 705, 1335, 1466, 1793, 1866
BstDSI CCRYGG 1 cut(s) 767
BstENI CCTNNNNNAGG 1 cut(s) 2190
BstF5I GGATG 6 cut(s) 291, 844, 902, 1022, 1654, 1678
BstFNI CGCG 2 cut(s) 1602, 1977
BstH2I RGCGCY 1 cut(s) 31
BstHHI GCGC 4 cut(s) 30, 1602, 1604, 1979
BstKTI GATC 8 cut(s) 938, 1268, 1325, 1393, 1823, 1828, 1873, 2098
BstMAI GTCTC 4 cut(s) 12, 170, 1053, 1320
BstMBI GATC 8 cut(s) 935, 1265, 1322, 1390, 1820, 1825, 1870, 2095
BstMWI GCNNNNNNNGC 6 cut(s) 563, 695, 752, 1027, 1606, 2088
BstNI CCWGG 7 cut(s) 335, 533, 1129, 1699, 1716, 1955, 2018
BstSCI CCNGG 8 cut(s) 333, 531, 1127, 1298, 1697, 1714, 1953, 2016
BstSLI GKGCMC 1 cut(s) 1080
BstUI CGCG 2 cut(s) 1602, 1977
BstV1I GCAGC 5 cut(s) 634, 733, 1298, 2038, 2050
BstV2I GAAGAC 3 cut(s) 297, 1390, 1924
BstX2I RGATCY 4 cut(s) 1265, 1322, 1390, 1820
BstXI CCANNNNNNTGG 1 cut(s) 1767
BstYI RGATCY 4 cut(s) 1265, 1322, 1390, 1820
Bsu15I ATCGAT 2 cut(s) 854, 1940
BsuRI GGCC 1 cut(s) 2021
BsuTUI ATCGAT 2 cut(s) 854, 1940
BtgI CCRYGG 1 cut(s) 767
BtgZI GCGATG 1 cut(s) 1047
BtrI CACGTC 1 cut(s) 1628
BtsCI GGATG 6 cut(s) 291, 844, 902, 1022, 1654, 1678
BtsIMutI CAGTG 5 cut(s) 1043, 1546, 1677, 1790, 2199
BveI ACCTGC 1 cut(s) 571
Cac8I GCNNGC 5 cut(s) 608, 774, 1134, 1602, 2089
CfoI GCGC 4 cut(s) 30, 1602, 1604, 1979
Cfr10I RCCGGY 1 cut(s) 2120
Cfr13I GGNCC 3 cut(s) 1708, 1745, 1812
ClaI ATCGAT 2 cut(s) 854, 1940
CseI GACGC 1 cut(s) 1125
Csp6I GTAC 2 cut(s) 53, 1946
CviAII CATG 4 cut(s) 768, 1606, 1832, 2093
CviQI GTAC 2 cut(s) 53, 1946
DdeI CTNAG 8 cut(s) 189, 441, 543, 705, 1335, 1466, 1793, 1866
DpnI GATC 8 cut(s) 937, 1267, 1324, 1392, 1822, 1827, 1872, 2097
DpnII GATC 8 cut(s) 935, 1265, 1322, 1390, 1820, 1825, 1870, 2095
DraIII CACNNNGTG 1 cut(s) 589
Eam1104I CTCTTC 7 cut(s) 351, 657, 966, 983, 1989, 2004, 2043
EarI CTCTTC 7 cut(s) 351, 657, 966, 983, 1989, 2004, 2043
EciI GGCGGA 1 cut(s) 27
Eco130I CCWWGG 1 cut(s) 767
Eco24I GRGCYC 1 cut(s) 2016
Eco32I GATATC 1 cut(s) 858
Eco47I GGWCC 3 cut(s) 1708, 1745, 1812
Eco57I CTGAAG 3 cut(s) 1231, 1379, 2055
Eco88I CYCGRG 1 cut(s) 417
EcoNI CCTNNNNNAGG 1 cut(s) 2190
EcoO109I RGGNCCY 1 cut(s) 1708
EcoRI GAATTC 2 cut(s) 517, 1241
EcoRII CCWGG 7 cut(s) 333, 531, 1127, 1697, 1714, 1953, 2016
EcoRV GATATC 1 cut(s) 858
EcoT14I CCWWGG 1 cut(s) 767
EcoT22I ATGCAT 1 cut(s) 904
EcoT38I GRGCYC 1 cut(s) 2016
ErhI CCWWGG 1 cut(s) 767
Esp3I CGTCTC 1 cut(s) 12
FaeI CATG 4 cut(s) 771, 1609, 1835, 2096
FalI AAGNNNNNCTT 2 cut(s) 616, 648
FaqI GGGAC 1 cut(s) 1638
FatI CATG 4 cut(s) 767, 1605, 1831, 2092
FauI CCCGC 1 cut(s) 1182
FbaI TGATCA 1 cut(s) 2095
FblI GTMKAC 1 cut(s) 869
Fnu4HI GCNGC 7 cut(s) 31, 463, 648, 747, 1287, 2027, 2064
FokI GGATG 6 cut(s) 298, 851, 889, 1009, 1661, 1685
FriOI GRGCYC 1 cut(s) 2016
Fsp4HI GCNGC 7 cut(s) 31, 463, 648, 747, 1287, 2027, 2064
FspBI CTAG 6 cut(s) 324, 777, 894, 1014, 1380, 2187
GlaI GCGC 4 cut(s) 29, 1601, 1603, 1978
GluI GCNGC 7 cut(s) 31, 463, 648, 747, 1287, 2027, 2064
HaeII RGCGCY 1 cut(s) 31
HaeIII GGCC 1 cut(s) 2021
HapII CCGG 5 cut(s) 752, 1300, 1640, 2121, 2175
HgaI GACGC 1 cut(s) 1125
HhaI GCGC 4 cut(s) 30, 1602, 1604, 1979
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 4 cut(s) 771, 1609, 1835, 2096
Hin6I GCGC 4 cut(s) 28, 1600, 1602, 1977
HinP1I GCGC 4 cut(s) 28, 1600, 1602, 1977
HindIII AAGCTT 1 cut(s) 1590
HpaII CCGG 5 cut(s) 752, 1300, 1640, 2121, 2175
HphI GGTGA 8 cut(s) 185, 503, 750, 812, 1029, 1648, 2135, 2189
Hpy166II GTNNAC 2 cut(s) 870, 2180
Hpy8I GTNNAC 2 cut(s) 870, 2180
Hpy99I CGWCG 2 cut(s) 173, 224
HpyAV CCTTC 9 cut(s) 159, 822, 939, 1050, 1249, 1476, 1528, 1639, 1721
HpyCH4III ACNGT 5 cut(s) 181, 1011, 1047, 1681, 1745
HpyCH4IV ACGT 4 cut(s) 585, 1096, 1627, 1762
HpyCH4V TGCA 5 cut(s) 592, 902, 1523, 2087, 2161
HpyF10VI GCNNNNNNNGC 6 cut(s) 563, 695, 752, 1027, 1606, 2088
HpyF3I CTNAG 8 cut(s) 189, 441, 543, 705, 1335, 1466, 1793, 1866
HpySE526I ACGT 4 cut(s) 585, 1096, 1627, 1762
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 4 cut(s) 771, 1609, 1835, 2096
HspAI GCGC 4 cut(s) 28, 1600, 1602, 1977
Ksp22I TGATCA 1 cut(s) 2095
Kzo9I GATC 8 cut(s) 935, 1265, 1322, 1390, 1820, 1825, 1870, 2095
LguI GCTCTTC 2 cut(s) 657, 2004
LmnI GCTCC 4 cut(s) 163, 686, 754, 1501
Lsp1109I GCAGC 5 cut(s) 634, 733, 1298, 2038, 2050
LweI GCATC 2 cut(s) 601, 911
MaeI CTAG 6 cut(s) 324, 777, 894, 1014, 1380, 2187
MaeII ACGT 4 cut(s) 585, 1096, 1627, 1762
MaeIII GTNAC 9 cut(s) 581, 800, 951, 1111, 1137, 1487, 1628, 1654, 2038
MalI GATC 8 cut(s) 937, 1267, 1324, 1392, 1822, 1827, 1872, 2097
MbiI CCGCTC 1 cut(s) 33
MboI GATC 8 cut(s) 935, 1265, 1322, 1390, 1820, 1825, 1870, 2095
MflI RGATCY 4 cut(s) 1265, 1322, 1390, 1820
MhlI GDGCHC 4 cut(s) 186, 418, 1080, 2016
MmeI TCCRAC 2 cut(s) 1188, 1597
Mph1103I ATGCAT 1 cut(s) 904
MroXI GAANNNNTTC 3 cut(s) 204, 920, 1548
MseI TTAA 5 cut(s) 281, 623, 693, 849, 1278
MslI CAYNNNNRTG 1 cut(s) 1155
MspA1I CMGCKG 2 cut(s) 272, 1289
MspI CCGG 5 cut(s) 752, 1300, 1640, 2121, 2175
MspR9I CCNGG 8 cut(s) 335, 533, 1129, 1300, 1699, 1716, 1955, 2018
MvaI CCWGG 7 cut(s) 335, 533, 1129, 1699, 1716, 1955, 2018
MvnI CGCG 2 cut(s) 1602, 1977
MwoI GCNNNNNNNGC 6 cut(s) 563, 695, 752, 1027, 1606, 2088
NciI CCSGG 1 cut(s) 1300
NcoI CCATGG 1 cut(s) 767
NdeII GATC 8 cut(s) 935, 1265, 1322, 1390, 1820, 1825, 1870, 2095
NlaIII CATG 4 cut(s) 771, 1609, 1835, 2096
NlaIV GGNNCC 1 cut(s) 1165
NmeAIII GCCGAG 3 cut(s) 1126, 1922, 2047
NmuCI GTSAC 7 cut(s) 581, 800, 951, 1137, 1487, 1628, 1654
NsiI ATGCAT 1 cut(s) 904
NspV TTCGAA 1 cut(s) 2046
PaeR7I CTCGAG 1 cut(s) 417
PalAI GGCGCGCC 1 cut(s) 1600
PauI GCGCGC 1 cut(s) 1600
PciSI GCTCTTC 2 cut(s) 657, 2004
PcsI WCGNNNNNNNCGW 1 cut(s) 1624
PdmI GAANNNNTTC 3 cut(s) 204, 920, 1548
PfoI TCCNGGA 2 cut(s) 1298, 1697
PkrI GCNGC 7 cut(s) 32, 464, 649, 748, 1288, 2028, 2065
PpuMI RGGWCCY 1 cut(s) 1708
Psp5II RGGWCCY 1 cut(s) 1708
Psp6I CCWGG 7 cut(s) 333, 531, 1127, 1697, 1714, 1953, 2016
PspGI CCWGG 7 cut(s) 333, 531, 1127, 1697, 1714, 1953, 2016
PspN4I GGNNCC 1 cut(s) 1165
PspPI GGNCC 3 cut(s) 1708, 1745, 1812
PspPPI RGGWCCY 1 cut(s) 1708
PspXI VCTCGAGB 1 cut(s) 417
PsuI RGATCY 4 cut(s) 1265, 1322, 1390, 1820
PteI GCGCGC 1 cut(s) 1600
PvuII CAGCTG 1 cut(s) 1289
RsaI GTAC 2 cut(s) 54, 1947
RsaNI GTAC 2 cut(s) 53, 1946
RseI CAYNNNNRTG 1 cut(s) 1155
SapI GCTCTTC 2 cut(s) 657, 2004
SaqAI TTAA 5 cut(s) 281, 623, 693, 849, 1278
SatI GCNGC 7 cut(s) 31, 463, 648, 747, 1287, 2027, 2064
Sau3AI GATC 8 cut(s) 935, 1265, 1322, 1390, 1820, 1825, 1870, 2095
Sau96I GGNCC 3 cut(s) 1708, 1745, 1812
ScrFI CCNGG 8 cut(s) 335, 533, 1129, 1300, 1699, 1716, 1955, 2018
SduI GDGCHC 4 cut(s) 186, 418, 1080, 2016
SfaNI GCATC 2 cut(s) 601, 911
Sfr274I CTCGAG 1 cut(s) 417
SfuI TTCGAA 1 cut(s) 2046
SgsI GGCGCGCC 1 cut(s) 1600
SinI GGWCC 3 cut(s) 1708, 1745, 1812
SlaI CTCGAG 1 cut(s) 417
SmiMI CAYNNNNRTG 1 cut(s) 1155
SmlI CTYRAG 2 cut(s) 153, 417
SmoI CTYRAG 2 cut(s) 153, 417
SpeI ACTAGT 1 cut(s) 893
SsiI CCGC 8 cut(s) 31, 38, 56, 270, 462, 698, 945, 1189
SspMI CTAG 6 cut(s) 324, 777, 894, 1014, 1380, 2187
StyD4I CCNGG 8 cut(s) 333, 531, 1127, 1298, 1697, 1714, 1953, 2016
StyI CCWWGG 1 cut(s) 767
TaaI ACNGT 5 cut(s) 181, 1011, 1047, 1681, 1745
TaiI ACGT 4 cut(s) 588, 1099, 1630, 1765
TaqI TCGA 7 cut(s) 418, 559, 854, 934, 1913, 1940, 2046
TaqII GACCGA 1 cut(s) 855
TatI WGTACW 1 cut(s) 1945
TauI GCSGC 2 cut(s) 33, 465
Tru1I TTAA 5 cut(s) 281, 623, 693, 849, 1278
Tru9I TTAA 5 cut(s) 281, 623, 693, 849, 1278
TscAI CASTG 5 cut(s) 1050, 1546, 1684, 1797, 2206
TseFI GTSAC 7 cut(s) 581, 800, 951, 1137, 1487, 1628, 1654
TseI GCWGC 5 cut(s) 647, 746, 1286, 2026, 2063
Tsp45I GTSAC 7 cut(s) 581, 800, 951, 1137, 1487, 1628, 1654
TspDTI ATGAA 8 cut(s) 197, 516, 855, 873, 993, 1748, 1851, 2119
TspGWI ACGGA 1 cut(s) 1795
TspRI CASTG 5 cut(s) 1050, 1546, 1684, 1797, 2206
VpaK11BI GGWCC 3 cut(s) 1708, 1745, 1812
XagI CCTNNNNNAGG 1 cut(s) 2190
XapI RAATTY 5 cut(s) 485, 517, 817, 1241, 2138
XbaI TCTAGA 1 cut(s) 323
XhoI CTCGAG 1 cut(s) 417
XmiI GTMKAC 1 cut(s) 869
XmnI GAANNNNTTC 3 cut(s) 204, 920, 1548
XspI CTAG 6 cut(s) 324, 777, 894, 1014, 1380, 2187
Zsp2I ATGCAT 1 cut(s) 904
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.