Cotton fibre expressed protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G60380 |
| fragaria_vesca | FvH4_7g09850 |
| malus_domestica | MD02G1216600.v1.1 MD07G1103700.v1.1 |
| prunus_persica | Prupe.2G127500_v2.0.a1 |
| pyrus_communis | pycom02g17820 pycom02g17830 pycom07g08460 pycom07g08740 pycom07g08880 pycom07g08900 |
| rosa_chinensis | RchiOBHm_Chr1g0347391 |
| rosa_laevigata | RLG00000028754 |
| rosa_multiflora | Rmu_co8226457.1_g000001 Rmu_sc0002705.1_g000039 |
| rosa_roxburghii | Rroxscaffold_4G00307860 |
| rosa_rugosa | Rorug01G0186300 |
| rosa_samantha | Rh1AG204000 Rh1BG169700 Rh1CG189100 Rh1DG200100 |
| rosa_wichuraiana | Rw1G017110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 367 |
| AcsI | RAATTY | 1 cut(s) | 193 |
| AflIII | ACRYGT | 1 cut(s) | 362 |
| AgsI | TTSAA | 2 cut(s) | 17, 211 |
| AluBI | AGCT | 2 cut(s) | 147, 218 |
| AluI | AGCT | 2 cut(s) | 147, 218 |
| Alw26I | GTCTC | 1 cut(s) | 444 |
| ApeKI | GCWGC | 2 cut(s) | 218, 221 |
| ApoI | RAATTY | 1 cut(s) | 193 |
| AsuC2I | CCSGG | 1 cut(s) | 236 |
| AsuHPI | GGTGA | 2 cut(s) | 188, 219 |
| AsuII | TTCGAA | 1 cut(s) | 98 |
| BanII | GRGCYC | 1 cut(s) | 137 |
| BbvI | GCAGC | 2 cut(s) | 205, 208 |
| BccI | CCATC | 4 cut(s) | 146, 238, 259, 391 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 203, 237 |
| BcnI | CCSGG | 1 cut(s) | 236 |
| BcoDI | GTCTC | 1 cut(s) | 444 |
| BisI | GCNGC | 2 cut(s) | 219, 222 |
| BlsI | GCNGC | 2 cut(s) | 220, 223 |
| Bme1390I | CCNGG | 1 cut(s) | 236 |
| BmrFI | CCNGG | 1 cut(s) | 236 |
| BmsI | GCATC | 1 cut(s) | 233 |
| Bpu14I | TTCGAA | 1 cut(s) | 98 |
| BpuMI | CCSGG | 1 cut(s) | 236 |
| BsaBI | GATNNNNATC | 1 cut(s) | 381 |
| BsaJI | CCNNGG | 1 cut(s) | 234 |
| Bse8I | GATNNNNATC | 1 cut(s) | 381 |
| BseDI | CCNNGG | 1 cut(s) | 234 |
| BseGI | GGATG | 3 cut(s) | 230, 270, 406 |
| BseJI | GATNNNNATC | 1 cut(s) | 381 |
| BseXI | GCAGC | 2 cut(s) | 205, 208 |
| BsiSI | CCGG | 1 cut(s) | 236 |
| BsmAI | GTCTC | 1 cut(s) | 444 |
| Bsp119I | TTCGAA | 1 cut(s) | 98 |
| Bsp1286I | GDGCHC | 1 cut(s) | 137 |
| BspT104I | TTCGAA | 1 cut(s) | 98 |
| BssECI | CCNNGG | 1 cut(s) | 234 |
| BstBI | TTCGAA | 1 cut(s) | 98 |
| BstDEI | CTNAG | 2 cut(s) | 129, 454 |
| BstF5I | GGATG | 3 cut(s) | 230, 270, 406 |
| BstMAI | GTCTC | 1 cut(s) | 444 |
| BstNSI | RCATGY | 1 cut(s) | 366 |
| BstSCI | CCNGG | 1 cut(s) | 234 |
| BstV1I | GCAGC | 2 cut(s) | 205, 208 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 89 |
| BtsCI | GGATG | 3 cut(s) | 230, 270, 406 |
| CviAII | CATG | 2 cut(s) | 363, 372 |
| CviJI | RGCY | 6 cut(s) | 109, 135, 147, 218, 329, 462 |
| CviKI_1 | RGCY | 6 cut(s) | 109, 135, 147, 218, 329, 462 |
| DdeI | CTNAG | 2 cut(s) | 129, 454 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 367 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 367 |
| Eco24I | GRGCYC | 1 cut(s) | 137 |
| EcoT38I | GRGCYC | 1 cut(s) | 137 |
| FaeI | CATG | 2 cut(s) | 366, 375 |
| FaiI | YATR | 7 cut(s) | 48, 50, 191, 364, 373, 421, 470 |
| FatI | CATG | 2 cut(s) | 362, 371 |
| FauNDI | CATATG | 1 cut(s) | 48 |
| Fnu4HI | GCNGC | 2 cut(s) | 219, 222 |
| FokI | GGATG | 3 cut(s) | 217, 277, 413 |
| FriOI | GRGCYC | 1 cut(s) | 137 |
| Fsp4HI | GCNGC | 2 cut(s) | 219, 222 |
| GluI | GCNGC | 2 cut(s) | 219, 222 |
| HapII | CCGG | 1 cut(s) | 236 |
| Hin1II | CATG | 2 cut(s) | 366, 375 |
| HinfI | GANTC | 1 cut(s) | 351 |
| HpaII | CCGG | 1 cut(s) | 236 |
| HphI | GGTGA | 2 cut(s) | 188, 219 |
| Hpy166II | GTNNAC | 1 cut(s) | 6 |
| Hpy188I | TCNGA | 2 cut(s) | 151, 350 |
| Hpy8I | GTNNAC | 1 cut(s) | 6 |
| HpyCH4V | TGCA | 3 cut(s) | 46, 224, 260 |
| HpyF3I | CTNAG | 2 cut(s) | 129, 454 |
| Hsp92II | CATG | 2 cut(s) | 366, 375 |
| LpnPI | CCDG | 2 cut(s) | 249, 339 |
| Lsp1109I | GCAGC | 2 cut(s) | 205, 208 |
| LweI | GCATC | 1 cut(s) | 233 |
| MfeI | CAATTG | 1 cut(s) | 41 |
| MhlI | GDGCHC | 1 cut(s) | 137 |
| MluCI | AATT | 4 cut(s) | 17, 41, 193, 408 |
| MlyI | GAGTC | 1 cut(s) | 360 |
| MnlI | CCTC | 2 cut(s) | 160, 473 |
| MseI | TTAA | 7 cut(s) | 53, 59, 77, 141, 356, 407, 478 |
| MspI | CCGG | 1 cut(s) | 236 |
| MspR9I | CCNGG | 1 cut(s) | 236 |
| MunI | CAATTG | 1 cut(s) | 41 |
| NciI | CCSGG | 1 cut(s) | 236 |
| NdeI | CATATG | 1 cut(s) | 48 |
| NlaIII | CATG | 2 cut(s) | 366, 375 |
| NspI | RCATGY | 1 cut(s) | 366 |
| NspV | TTCGAA | 1 cut(s) | 98 |
| PciI | ACATGT | 1 cut(s) | 362 |
| PkrI | GCNGC | 2 cut(s) | 220, 223 |
| PleI | GAGTC | 1 cut(s) | 359 |
| PpsI | GAGTC | 1 cut(s) | 359 |
| PscI | ACATGT | 1 cut(s) | 362 |
| SaqAI | TTAA | 7 cut(s) | 53, 59, 77, 141, 356, 407, 478 |
| SatI | GCNGC | 2 cut(s) | 219, 222 |
| SchI | GAGTC | 1 cut(s) | 360 |
| ScrFI | CCNGG | 1 cut(s) | 236 |
| SduI | GDGCHC | 1 cut(s) | 137 |
| SetI | ASST | 5 cut(s) | 127, 149, 220, 289, 391 |
| SfaNI | GCATC | 1 cut(s) | 233 |
| SfuI | TTCGAA | 1 cut(s) | 98 |
| Sse9I | AATT | 4 cut(s) | 17, 41, 193, 408 |
| StyD4I | CCNGG | 1 cut(s) | 234 |
| TaqI | TCGA | 1 cut(s) | 98 |
| TaqII | GACCGA | 1 cut(s) | 307 |
| TasI | AATT | 4 cut(s) | 17, 41, 193, 408 |
| Tru1I | TTAA | 7 cut(s) | 53, 59, 77, 141, 356, 407, 478 |
| Tru9I | TTAA | 7 cut(s) | 53, 59, 77, 141, 356, 407, 478 |
| TseI | GCWGC | 2 cut(s) | 218, 221 |
| TspDTI | ATGAA | 2 cut(s) | 230, 324 |
| TspGWI | ACGGA | 1 cut(s) | 457 |
| XapI | RAATTY | 1 cut(s) | 193 |
| XceI | RCATGY | 1 cut(s) | 366 |