Cotton fibre expressed protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G60380 |
| fragaria_vesca | FvH4_7g09850 |
| malus_domestica | MD02G1216600.v1.1 MD07G1103700.v1.1 |
| prunus_persica | Prupe.2G127500_v2.0.a1 |
| pyrus_communis | pycom02g17820 pycom02g17830 pycom07g08460 pycom07g08740 pycom07g08880 pycom07g08900 |
| rosa_chinensis | RchiOBHm_Chr1g0347391 |
| rosa_laevigata | RLG00000028754 |
| rosa_multiflora | Rmu_co8226457.1_g000001 Rmu_sc0002705.1_g000039 |
| rosa_roxburghii | Rroxscaffold_4G00307860 |
| rosa_rugosa | Rorug01G0186300 |
| rosa_samantha | Rh1AG204000 Rh1BG169700 Rh1CG189100 Rh1DG200100 |
| rosa_wichuraiana | Rw1G017110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 117 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 216, 479 |
| AcsI | RAATTY | 6 cut(s) | 185, 412, 496, 538, 793, 806 |
| AcuI | CTGAAG | 1 cut(s) | 827 |
| AfaI | GTAC | 2 cut(s) | 436, 548 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 44, 216, 479, 722 |
| AgsI | TTSAA | 7 cut(s) | 77, 299, 317, 494, 664, 729, 811 |
| AjnI | CCWGG | 3 cut(s) | 43, 681, 715 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 636, 668 |
| AluBI | AGCT | 6 cut(s) | 179, 223, 533, 578, 771, 818 |
| AluI | AGCT | 6 cut(s) | 179, 223, 533, 578, 771, 818 |
| AoxI | GGCC | 1 cut(s) | 13 |
| ApeKI | GCWGC | 1 cut(s) | 734 |
| ApoI | RAATTY | 6 cut(s) | 185, 412, 496, 538, 793, 806 |
| AspA2I | CCTAGG | 1 cut(s) | 338 |
| AspS9I | GGNCC | 1 cut(s) | 14 |
| AsuHPI | GGTGA | 5 cut(s) | 199, 389, 569, 788, 819 |
| AvrII | CCTAGG | 1 cut(s) | 338 |
| BbvI | GCAGC | 1 cut(s) | 721 |
| BccI | CCATC | 4 cut(s) | 283, 344, 479, 859 |
| BciT130I | CCWGG | 3 cut(s) | 45, 683, 717 |
| BfaI | CTAG | 3 cut(s) | 339, 705, 800 |
| BfuAI | ACCTGC | 1 cut(s) | 117 |
| BisI | GCNGC | 1 cut(s) | 735 |
| BlnI | CCTAGG | 1 cut(s) | 338 |
| BlsI | GCNGC | 1 cut(s) | 736 |
| BmcAI | AGTACT | 2 cut(s) | 436, 548 |
| Bme1390I | CCNGG | 3 cut(s) | 45, 683, 717 |
| BmgT120I | GGNCC | 1 cut(s) | 14 |
| BmiI | GGNNCC | 1 cut(s) | 786 |
| BmrFI | CCNGG | 3 cut(s) | 45, 683, 717 |
| BmrI | ACTGGG | 1 cut(s) | 830 |
| BmsI | GCATC | 3 cut(s) | 439, 746, 833 |
| BmuI | ACTGGG | 1 cut(s) | 830 |
| BpuEI | CTTGAG | 2 cut(s) | 413, 513 |
| BsaJI | CCNNGG | 2 cut(s) | 44, 338 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 760, 790 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 44, 216, 479, 722 |
| Bse1I | ACTGG | 2 cut(s) | 304, 836 |
| BseBI | CCWGG | 3 cut(s) | 45, 683, 717 |
| BseDI | CCNNGG | 2 cut(s) | 44, 338 |
| BseGI | GGATG | 2 cut(s) | 54, 348 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 44, 216, 479, 722 |
| BseMII | CTCAG | 3 cut(s) | 422, 557, 684 |
| BseNI | ACTGG | 2 cut(s) | 304, 836 |
| BseXI | GCAGC | 1 cut(s) | 721 |
| BshFI | GGCC | 1 cut(s) | 15 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 44, 216, 479, 722 |
| BsnI | GGCC | 1 cut(s) | 15 |
| BspANI | GGCC | 1 cut(s) | 15 |
| BspCNI | CTCAG | 3 cut(s) | 421, 556, 685 |
| BspLI | GGNNCC | 1 cut(s) | 786 |
| BspMI | ACCTGC | 1 cut(s) | 117 |
| BsrI | ACTGG | 2 cut(s) | 304, 836 |
| BssECI | CCNNGG | 2 cut(s) | 44, 338 |
| BssT1I | CCWWGG | 1 cut(s) | 338 |
| Bst2UI | CCWGG | 3 cut(s) | 45, 683, 717 |
| Bst4CI | ACNGT | 1 cut(s) | 439 |
| BstDEI | CTNAG | 3 cut(s) | 408, 543, 693 |
| BstEII | GGTNACC | 1 cut(s) | 422 |
| BstF5I | GGATG | 2 cut(s) | 54, 348 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 270 |
| BstNI | CCWGG | 3 cut(s) | 45, 683, 717 |
| BstPI | GGTNACC | 1 cut(s) | 422 |
| BstSCI | CCNGG | 3 cut(s) | 43, 681, 715 |
| BstV1I | GCAGC | 1 cut(s) | 721 |
| BsuRI | GGCC | 1 cut(s) | 15 |
| BtsCI | GGATG | 2 cut(s) | 54, 348 |
| BveI | ACCTGC | 1 cut(s) | 117 |
| Cfr13I | GGNCC | 1 cut(s) | 14 |
| Csp6I | GTAC | 2 cut(s) | 435, 547 |
| CviAII | CATG | 1 cut(s) | 366 |
| CviQI | GTAC | 2 cut(s) | 435, 547 |
| DdeI | CTNAG | 3 cut(s) | 408, 543, 693 |
| DraI | TTTAAA | 2 cut(s) | 124, 511 |
| Eco130I | CCWWGG | 1 cut(s) | 338 |
| Eco57I | CTGAAG | 1 cut(s) | 827 |
| Eco91I | GGTNACC | 1 cut(s) | 422 |
| EcoO109I | RGGNCCY | 1 cut(s) | 14 |
| EcoO65I | GGTNACC | 1 cut(s) | 422 |
| EcoRI | GAATTC | 1 cut(s) | 538 |
| EcoRII | CCWGG | 3 cut(s) | 43, 681, 715 |
| EcoT14I | CCWWGG | 1 cut(s) | 338 |
| ErhI | CCWWGG | 1 cut(s) | 338 |
| FaeI | CATG | 1 cut(s) | 369 |
| FatI | CATG | 1 cut(s) | 365 |
| Fnu4HI | GCNGC | 1 cut(s) | 735 |
| FokI | GGATG | 2 cut(s) | 61, 355 |
| Fsp4HI | GCNGC | 1 cut(s) | 735 |
| FspBI | CTAG | 3 cut(s) | 339, 705, 800 |
| GluI | GCNGC | 1 cut(s) | 735 |
| HaeIII | GGCC | 1 cut(s) | 15 |
| Hin1II | CATG | 1 cut(s) | 369 |
| HindIII | AAGCTT | 1 cut(s) | 531 |
| HinfI | GANTC | 3 cut(s) | 8, 326, 560 |
| HphI | GGTGA | 5 cut(s) | 199, 389, 569, 788, 819 |
| Hpy188I | TCNGA | 3 cut(s) | 23, 411, 657 |
| Hpy188III | TCNNGA | 4 cut(s) | 182, 392, 491, 858 |
| HpyAV | CCTTC | 2 cut(s) | 180, 840 |
| HpyCH4III | ACNGT | 1 cut(s) | 439 |
| HpyCH4V | TGCA | 3 cut(s) | 112, 459, 737 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 270 |
| HpyF3I | CTNAG | 3 cut(s) | 408, 543, 693 |
| Hsp92II | CATG | 1 cut(s) | 369 |
| LmnI | GCTCC | 4 cut(s) | 184, 220, 768, 790 |
| Lsp1109I | GCAGC | 1 cut(s) | 721 |
| LweI | GCATC | 3 cut(s) | 439, 746, 833 |
| MaeI | CTAG | 3 cut(s) | 339, 705, 800 |
| MaeIII | GTNAC | 2 cut(s) | 422, 700 |
| MboII | GAAGA | 5 cut(s) | 124, 224, 288, 394, 833 |
| MluCI | AATT | 9 cut(s) | 113, 185, 246, 412, 475, 496, 538, 793, 806 |
| MlyI | GAGTC | 1 cut(s) | 335 |
| MmeI | TCCRAC | 1 cut(s) | 380 |
| MnlI | CCTC | 2 cut(s) | 171, 663 |
| MseI | TTAA | 3 cut(s) | 123, 510, 675 |
| MspR9I | CCNGG | 3 cut(s) | 45, 683, 717 |
| MvaI | CCWGG | 3 cut(s) | 45, 683, 717 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 270 |
| NlaIII | CATG | 1 cut(s) | 369 |
| NlaIV | GGNNCC | 1 cut(s) | 786 |
| PfeI | GAWTC | 2 cut(s) | 8, 560 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 216, 479 |
| PkrI | GCNGC | 1 cut(s) | 736 |
| PleI | GAGTC | 1 cut(s) | 334 |
| PpsI | GAGTC | 1 cut(s) | 334 |
| Psp6I | CCWGG | 3 cut(s) | 43, 681, 715 |
| PspEI | GGTNACC | 1 cut(s) | 422 |
| PspGI | CCWGG | 3 cut(s) | 43, 681, 715 |
| PspN4I | GGNNCC | 1 cut(s) | 786 |
| PspPI | GGNCC | 1 cut(s) | 14 |
| RsaI | GTAC | 2 cut(s) | 436, 548 |
| RsaNI | GTAC | 2 cut(s) | 435, 547 |
| SaqAI | TTAA | 3 cut(s) | 123, 510, 675 |
| SatI | GCNGC | 1 cut(s) | 735 |
| Sau96I | GGNCC | 1 cut(s) | 14 |
| ScaI | AGTACT | 2 cut(s) | 436, 548 |
| SchI | GAGTC | 1 cut(s) | 335 |
| ScrFI | CCNGG | 3 cut(s) | 45, 683, 717 |
| SfaNI | GCATC | 3 cut(s) | 439, 746, 833 |
| SmlI | CTYRAG | 2 cut(s) | 392, 528 |
| SmoI | CTYRAG | 2 cut(s) | 392, 528 |
| Sse9I | AATT | 9 cut(s) | 113, 185, 246, 412, 475, 496, 538, 793, 806 |
| SspMI | CTAG | 3 cut(s) | 339, 705, 800 |
| StyD4I | CCNGG | 3 cut(s) | 43, 681, 715 |
| StyI | CCWWGG | 1 cut(s) | 338 |
| TaaI | ACNGT | 1 cut(s) | 439 |
| TaqI | TCGA | 3 cut(s) | 668, 851, 859 |
| TasI | AATT | 9 cut(s) | 113, 185, 246, 412, 475, 496, 538, 793, 806 |
| TatI | WGTACW | 2 cut(s) | 434, 546 |
| TfiI | GAWTC | 2 cut(s) | 8, 560 |
| Tru1I | TTAA | 3 cut(s) | 123, 510, 675 |
| Tru9I | TTAA | 3 cut(s) | 123, 510, 675 |
| TseI | GCWGC | 1 cut(s) | 734 |
| TspDTI | ATGAA | 4 cut(s) | 65, 218, 229, 372 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 216, 479 |
| XapI | RAATTY | 6 cut(s) | 185, 412, 496, 538, 793, 806 |
| XmaJI | CCTAGG | 1 cut(s) | 338 |
| XspI | CTAG | 3 cut(s) | 339, 705, 800 |
| ZrmI | AGTACT | 2 cut(s) | 436, 548 |