Cotton fibre expressed protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G60380 |
| fragaria_vesca | FvH4_7g09850 |
| malus_domestica | MD02G1216600.v1.1 MD07G1103700.v1.1 |
| prunus_persica | Prupe.2G127500_v2.0.a1 |
| pyrus_communis | pycom02g17820 pycom02g17830 pycom07g08460 pycom07g08740 pycom07g08880 pycom07g08900 |
| rosa_chinensis | RchiOBHm_Chr1g0347391 |
| rosa_laevigata | RLG00000028754 |
| rosa_multiflora | Rmu_co8226457.1_g000001 Rmu_sc0002705.1_g000039 |
| rosa_roxburghii | Rroxscaffold_4G00307860 |
| rosa_rugosa | Rorug01G0186300 |
| rosa_samantha | Rh1AG204000 Rh1BG169700 Rh1CG189100 Rh1DG200100 |
| rosa_wichuraiana | Rw1G017110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1378 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 207, 623 |
| AccI | GTMKAC | 1 cut(s) | 1429 |
| AccII | CGCG | 1 cut(s) | 1078 |
| AclWI | GGATC | 2 cut(s) | 1323, 1709 |
| AcuI | CTGAAG | 3 cut(s) | 1074, 1140, 1674 |
| AfaI | GTAC | 3 cut(s) | 542, 581, 1210 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 207, 623, 1252 |
| AflIII | ACRYGT | 1 cut(s) | 1739 |
| AhlI | ACTAGT | 1 cut(s) | 1037 |
| AjnI | CCWGG | 1 cut(s) | 714 |
| AlwI | GGATC | 2 cut(s) | 1323, 1709 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1772 |
| Ama87I | CYCGRG | 1 cut(s) | 1221 |
| AoxI | GGCC | 4 cut(s) | 947, 1340, 1674, 1788 |
| ApeKI | GCWGC | 5 cut(s) | 857, 1724, 1727, 1730, 1733 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1052, 1084 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1683 |
| AspLEI | GCGC | 2 cut(s) | 1078, 1080 |
| AspS9I | GGNCC | 6 cut(s) | 7, 818, 993, 1002, 1340, 1763 |
| AsuHPI | GGTGA | 8 cut(s) | 190, 212, 602, 762, 821, 1047, 1164, 1805 |
| AvaI | CYCGRG | 1 cut(s) | 1221 |
| AvaII | GGWCC | 5 cut(s) | 7, 818, 993, 1002, 1763 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 919, 951 |
| BauI | CACGAG | 1 cut(s) | 1870 |
| BbsI | GAAGAC | 4 cut(s) | 1020, 1041, 1140, 1662 |
| BbvI | GCAGC | 5 cut(s) | 869, 1711, 1714, 1717, 1720 |
| BccI | CCATC | 2 cut(s) | 356, 892 |
| BciT130I | CCWGG | 1 cut(s) | 716 |
| BcuI | ACTAGT | 1 cut(s) | 1037 |
| BfaI | CTAG | 4 cut(s) | 1038, 1553, 1688, 1865 |
| BfmI | CTRYAG | 2 cut(s) | 855, 1228 |
| BfuAI | ACCTGC | 1 cut(s) | 1378 |
| BglII | AGATCT | 1 cut(s) | 1555 |
| BisI | GCNGC | 5 cut(s) | 858, 1725, 1728, 1731, 1734 |
| BlsI | GCNGC | 5 cut(s) | 859, 1726, 1729, 1732, 1735 |
| BmcAI | AGTACT | 1 cut(s) | 581 |
| Bme1390I | CCNGG | 1 cut(s) | 716 |
| Bme18I | GGWCC | 5 cut(s) | 7, 818, 993, 1002, 1763 |
| BmeT110I | CYCGRG | 1 cut(s) | 1221 |
| BmgT120I | GGNCC | 6 cut(s) | 7, 818, 993, 1002, 1340, 1763 |
| BmiI | GGNNCC | 3 cut(s) | 9, 819, 1516 |
| BmrFI | CCNGG | 1 cut(s) | 716 |
| BmrI | ACTGGG | 4 cut(s) | 481, 492, 747, 863 |
| BmsI | GCATC | 5 cut(s) | 90, 472, 1605, 1699, 1850 |
| BmuI | ACTGGG | 4 cut(s) | 481, 492, 747, 863 |
| BpiI | GAAGAC | 4 cut(s) | 1020, 1041, 1140, 1662 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 38, 70, 281, 313 |
| BpuEI | CTTGAG | 4 cut(s) | 546, 1125, 1279, 1312 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1713 |
| BsaWI | WCCGGW | 1 cut(s) | 999 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 207, 623, 1252 |
| Bse118I | RCCGGY | 1 cut(s) | 1790 |
| Bse1I | ACTGG | 7 cut(s) | 478, 487, 498, 506, 742, 869, 1549 |
| Bse3DI | GCAATG | 2 cut(s) | 237, 1639 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1713 |
| BseBI | CCWGG | 1 cut(s) | 716 |
| BseGI | GGATG | 2 cut(s) | 64, 903 |
| BseJI | GATNNNNATC | 1 cut(s) | 1713 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 207, 623, 1252 |
| BseMI | GCAATG | 2 cut(s) | 237, 1639 |
| BseMII | CTCAG | 7 cut(s) | 69, 440, 590, 657, 983, 1284, 1764 |
| BseNI | ACTGG | 7 cut(s) | 478, 487, 498, 506, 742, 869, 1549 |
| BsePI | GCGCGC | 1 cut(s) | 1076 |
| BseRI | GAGGAG | 3 cut(s) | 1079, 1265, 1276 |
| BseXI | GCAGC | 5 cut(s) | 869, 1711, 1714, 1717, 1720 |
| Bsh1236I | CGCG | 1 cut(s) | 1078 |
| BshFI | GGCC | 4 cut(s) | 949, 1342, 1676, 1790 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1221 |
| BsiSI | CCGG | 2 cut(s) | 1000, 1791 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 207, 623, 1252 |
| BsmI | GAATGC | 1 cut(s) | 1216 |
| BsnI | GGCC | 4 cut(s) | 949, 1342, 1676, 1790 |
| BsoBI | CYCGRG | 1 cut(s) | 1221 |
| Bsp143I | GATC | 6 cut(s) | 650, 1315, 1355, 1403, 1555, 1714 |
| BspANI | GGCC | 4 cut(s) | 949, 1342, 1676, 1790 |
| BspCNI | CTCAG | 7 cut(s) | 68, 439, 589, 658, 982, 1283, 1765 |
| BspFNI | CGCG | 1 cut(s) | 1078 |
| BspHI | TCATGA | 2 cut(s) | 463, 511 |
| BspLI | GGNNCC | 3 cut(s) | 9, 819, 1516 |
| BspMAI | CTGCAG | 1 cut(s) | 859 |
| BspMI | ACCTGC | 1 cut(s) | 1378 |
| BspPI | GGATC | 2 cut(s) | 1323, 1709 |
| BsrDI | GCAATG | 2 cut(s) | 237, 1639 |
| BsrFI | RCCGGY | 1 cut(s) | 1790 |
| BsrI | ACTGG | 7 cut(s) | 478, 487, 498, 506, 742, 869, 1549 |
| BssAI | RCCGGY | 1 cut(s) | 1790 |
| BssHII | GCGCGC | 1 cut(s) | 1076 |
| BssMI | GATC | 6 cut(s) | 650, 1315, 1355, 1403, 1555, 1714 |
| BssSI | CACGAG | 1 cut(s) | 1870 |
| Bst2BI | CACGAG | 1 cut(s) | 1870 |
| Bst2UI | CCWGG | 1 cut(s) | 716 |
| Bst4CI | ACNGT | 2 cut(s) | 454, 954 |
| Bst6I | CTCTTC | 6 cut(s) | 128, 828, 1024, 1127, 1305, 1641 |
| BstC8I | GCNNGC | 3 cut(s) | 1078, 1344, 1375 |
| BstDEI | CTNAG | 7 cut(s) | 55, 426, 576, 666, 969, 1270, 1773 |
| BstEII | GGTNACC | 1 cut(s) | 440 |
| BstF5I | GGATG | 2 cut(s) | 64, 903 |
| BstFNI | CGCG | 1 cut(s) | 1078 |
| BstHHI | GCGC | 2 cut(s) | 1078, 1080 |
| BstKTI | GATC | 6 cut(s) | 653, 1318, 1358, 1406, 1558, 1717 |
| BstMBI | GATC | 6 cut(s) | 650, 1315, 1355, 1403, 1555, 1714 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 261, 857, 1730, 1733, 1825 |
| BstNI | CCWGG | 1 cut(s) | 716 |
| BstNSI | RCATGY | 2 cut(s) | 1579, 1743 |
| BstPI | GGTNACC | 1 cut(s) | 440 |
| BstSCI | CCNGG | 1 cut(s) | 714 |
| BstSFI | CTRYAG | 2 cut(s) | 855, 1228 |
| BstUI | CGCG | 1 cut(s) | 1078 |
| BstV1I | GCAGC | 5 cut(s) | 869, 1711, 1714, 1717, 1720 |
| BstV2I | GAAGAC | 4 cut(s) | 1020, 1041, 1140, 1662 |
| BstX2I | RGATCY | 1 cut(s) | 1555 |
| BstYI | RGATCY | 1 cut(s) | 1555 |
| BsuRI | GGCC | 4 cut(s) | 949, 1342, 1676, 1790 |
| BtsCI | GGATG | 2 cut(s) | 64, 903 |
| BtsI | GCAGTG | 2 cut(s) | 852, 1211 |
| BtsIMutI | CAGTG | 6 cut(s) | 471, 494, 852, 950, 1211, 1437 |
| BveI | ACCTGC | 1 cut(s) | 1378 |
| Cac8I | GCNNGC | 3 cut(s) | 1078, 1344, 1375 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1772 |
| CciI | TCATGA | 2 cut(s) | 463, 511 |
| CfoI | GCGC | 2 cut(s) | 1078, 1080 |
| Cfr10I | RCCGGY | 1 cut(s) | 1790 |
| Cfr13I | GGNCC | 6 cut(s) | 7, 818, 993, 1002, 1340, 1763 |
| Csp6I | GTAC | 3 cut(s) | 541, 580, 1209 |
| CviAII | CATG | 9 cut(s) | 378, 464, 512, 587, 1045, 1247, 1576, 1628, 1740 |
| CviQI | GTAC | 3 cut(s) | 541, 580, 1209 |
| DdeI | CTNAG | 7 cut(s) | 55, 426, 576, 666, 969, 1270, 1773 |
| DpnI | GATC | 6 cut(s) | 652, 1317, 1357, 1405, 1557, 1716 |
| DpnII | GATC | 6 cut(s) | 650, 1315, 1355, 1403, 1555, 1714 |
| DraI | TTTAAA | 1 cut(s) | 115 |
| Eam1104I | CTCTTC | 6 cut(s) | 128, 828, 1024, 1127, 1305, 1641 |
| EarI | CTCTTC | 6 cut(s) | 128, 828, 1024, 1127, 1305, 1641 |
| Eco47I | GGWCC | 5 cut(s) | 7, 818, 993, 1002, 1763 |
| Eco57I | CTGAAG | 3 cut(s) | 1074, 1140, 1674 |
| Eco88I | CYCGRG | 1 cut(s) | 1221 |
| Eco91I | GGTNACC | 1 cut(s) | 440 |
| EcoO109I | RGGNCCY | 2 cut(s) | 7, 818 |
| EcoO65I | GGTNACC | 1 cut(s) | 440 |
| EcoRI | GAATTC | 2 cut(s) | 421, 839 |
| EcoRII | CCWGG | 1 cut(s) | 714 |
| FaeI | CATG | 9 cut(s) | 381, 467, 515, 590, 1048, 1250, 1579, 1631, 1743 |
| FatI | CATG | 9 cut(s) | 377, 463, 511, 586, 1044, 1246, 1575, 1627, 1739 |
| FauNDI | CATATG | 1 cut(s) | 535 |
| FblI | GTMKAC | 1 cut(s) | 1429 |
| Fnu4HI | GCNGC | 5 cut(s) | 858, 1725, 1728, 1731, 1734 |
| FokI | GGATG | 2 cut(s) | 51, 910 |
| Fsp4HI | GCNGC | 5 cut(s) | 858, 1725, 1728, 1731, 1734 |
| FspBI | CTAG | 4 cut(s) | 1038, 1553, 1688, 1865 |
| GlaI | GCGC | 2 cut(s) | 1077, 1079 |
| GluI | GCNGC | 5 cut(s) | 858, 1725, 1728, 1731, 1734 |
| HaeIII | GGCC | 4 cut(s) | 949, 1342, 1676, 1790 |
| HapII | CCGG | 2 cut(s) | 1000, 1791 |
| HhaI | GCGC | 2 cut(s) | 1078, 1080 |
| Hin1II | CATG | 9 cut(s) | 381, 467, 515, 590, 1048, 1250, 1579, 1631, 1743 |
| Hin6I | GCGC | 2 cut(s) | 1076, 1078 |
| HinP1I | GCGC | 2 cut(s) | 1076, 1078 |
| HindIII | AAGCTT | 2 cut(s) | 564, 1386 |
| HpaII | CCGG | 2 cut(s) | 1000, 1791 |
| HphI | GGTGA | 8 cut(s) | 190, 212, 602, 762, 821, 1047, 1164, 1805 |
| Hpy166II | GTNNAC | 5 cut(s) | 593, 644, 1005, 1211, 1430 |
| Hpy188III | TCNNGA | 5 cut(s) | 173, 464, 512, 891, 1814 |
| Hpy8I | GTNNAC | 5 cut(s) | 593, 644, 1005, 1211, 1430 |
| HpyAV | CCTTC | 6 cut(s) | 171, 888, 945, 1006, 1164, 1780 |
| HpyCH4III | ACNGT | 2 cut(s) | 454, 954 |
| HpyCH4IV | ACGT | 1 cut(s) | 517 |
| HpyCH4V | TGCA | 8 cut(s) | 103, 492, 857, 1216, 1373, 1573, 1618, 1760 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 261, 857, 1730, 1733, 1825 |
| HpyF3I | CTNAG | 7 cut(s) | 55, 426, 576, 666, 969, 1270, 1773 |
| HpySE526I | ACGT | 1 cut(s) | 517 |
| Hsp92II | CATG | 9 cut(s) | 381, 467, 515, 590, 1048, 1250, 1579, 1631, 1743 |
| HspAI | GCGC | 2 cut(s) | 1076, 1078 |
| Kzo9I | GATC | 6 cut(s) | 650, 1315, 1355, 1403, 1555, 1714 |
| LmnI | GCTCC | 4 cut(s) | 175, 211, 690, 1475 |
| Lsp1109I | GCAGC | 5 cut(s) | 869, 1711, 1714, 1717, 1720 |
| LweI | GCATC | 5 cut(s) | 90, 472, 1605, 1699, 1850 |
| MaeI | CTAG | 4 cut(s) | 1038, 1553, 1688, 1865 |
| MaeII | ACGT | 1 cut(s) | 517 |
| MaeIII | GTNAC | 6 cut(s) | 440, 448, 733, 1325, 1540, 1742 |
| MalI | GATC | 6 cut(s) | 652, 1317, 1357, 1405, 1557, 1716 |
| MboI | GATC | 6 cut(s) | 650, 1315, 1355, 1403, 1555, 1714 |
| MfeI | CAATTG | 2 cut(s) | 654, 1319 |
| MflI | RGATCY | 1 cut(s) | 1555 |
| MlyI | GAGTC | 7 cut(s) | 326, 755, 1034, 1076, 1655, 1658, 1763 |
| MmeI | TCCRAC | 1 cut(s) | 398 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1683 |
| MseI | TTAA | 3 cut(s) | 78, 114, 1394 |
| MslI | CAYNNNNRTG | 3 cut(s) | 242, 516, 1632 |
| MspI | CCGG | 2 cut(s) | 1000, 1791 |
| MspR9I | CCNGG | 1 cut(s) | 716 |
| MunI | CAATTG | 2 cut(s) | 654, 1319 |
| Mva1269I | GAATGC | 1 cut(s) | 1216 |
| MvaI | CCWGG | 1 cut(s) | 716 |
| MvnI | CGCG | 1 cut(s) | 1078 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 261, 857, 1730, 1733, 1825 |
| NdeI | CATATG | 1 cut(s) | 535 |
| NdeII | GATC | 6 cut(s) | 650, 1315, 1355, 1403, 1555, 1714 |
| NlaIII | CATG | 9 cut(s) | 381, 467, 515, 590, 1048, 1250, 1579, 1631, 1743 |
| NlaIV | GGNNCC | 3 cut(s) | 9, 819, 1516 |
| NmuCI | GTSAC | 1 cut(s) | 733 |
| NspI | RCATGY | 2 cut(s) | 1579, 1743 |
| PagI | TCATGA | 2 cut(s) | 463, 511 |
| PauI | GCGCGC | 1 cut(s) | 1076 |
| PciI | ACATGT | 1 cut(s) | 1739 |
| PctI | GAATGC | 1 cut(s) | 1216 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1683 |
| PfeI | GAWTC | 3 cut(s) | 292, 662, 977 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 207, 623 |
| PkrI | GCNGC | 5 cut(s) | 859, 1726, 1729, 1732, 1735 |
| PleI | GAGTC | 7 cut(s) | 325, 754, 1033, 1075, 1655, 1657, 1763 |
| PpsI | GAGTC | 7 cut(s) | 325, 754, 1033, 1075, 1655, 1657, 1763 |
| PpuMI | RGGWCCY | 2 cut(s) | 7, 818 |
| PscI | ACATGT | 1 cut(s) | 1739 |
| Psp5II | RGGWCCY | 2 cut(s) | 7, 818 |
| Psp6I | CCWGG | 1 cut(s) | 714 |
| PspEI | GGTNACC | 1 cut(s) | 440 |
| PspGI | CCWGG | 1 cut(s) | 714 |
| PspN4I | GGNNCC | 3 cut(s) | 9, 819, 1516 |
| PspPI | GGNCC | 6 cut(s) | 7, 818, 993, 1002, 1340, 1763 |
| PspPPI | RGGWCCY | 2 cut(s) | 7, 818 |
| PstI | CTGCAG | 1 cut(s) | 859 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1772 |
| PsuI | RGATCY | 1 cut(s) | 1555 |
| PteI | GCGCGC | 1 cut(s) | 1076 |
| RsaI | GTAC | 3 cut(s) | 542, 581, 1210 |
| RsaNI | GTAC | 3 cut(s) | 541, 580, 1209 |
| RseI | CAYNNNNRTG | 3 cut(s) | 242, 516, 1632 |
| SaqAI | TTAA | 3 cut(s) | 78, 114, 1394 |
| SatI | GCNGC | 5 cut(s) | 858, 1725, 1728, 1731, 1734 |
| Sau3AI | GATC | 6 cut(s) | 650, 1315, 1355, 1403, 1555, 1714 |
| Sau96I | GGNCC | 6 cut(s) | 7, 818, 993, 1002, 1340, 1763 |
| ScaI | AGTACT | 1 cut(s) | 581 |
| SchI | GAGTC | 7 cut(s) | 326, 755, 1034, 1076, 1655, 1658, 1763 |
| ScrFI | CCNGG | 1 cut(s) | 716 |
| SfaNI | GCATC | 5 cut(s) | 90, 472, 1605, 1699, 1850 |
| SfcI | CTRYAG | 2 cut(s) | 855, 1228 |
| SinI | GGWCC | 5 cut(s) | 7, 818, 993, 1002, 1763 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 242, 516, 1632 |
| SmlI | CTYRAG | 4 cut(s) | 561, 1140, 1258, 1291 |
| SmoI | CTYRAG | 4 cut(s) | 561, 1140, 1258, 1291 |
| SpeI | ACTAGT | 1 cut(s) | 1037 |
| SspMI | CTAG | 4 cut(s) | 1038, 1553, 1688, 1865 |
| StyD4I | CCNGG | 1 cut(s) | 714 |
| TaaI | ACNGT | 2 cut(s) | 454, 954 |
| TaiI | ACGT | 1 cut(s) | 520 |
| TaqI | TCGA | 2 cut(s) | 884, 1813 |
| TaqII | GACCGA | 1 cut(s) | 981 |
| TatI | WGTACW | 2 cut(s) | 579, 1208 |
| TfiI | GAWTC | 3 cut(s) | 292, 662, 977 |
| Tru1I | TTAA | 3 cut(s) | 78, 114, 1394 |
| Tru9I | TTAA | 3 cut(s) | 78, 114, 1394 |
| TscAI | CASTG | 6 cut(s) | 478, 494, 859, 957, 1218, 1444 |
| TseFI | GTSAC | 1 cut(s) | 733 |
| TseI | GCWGC | 5 cut(s) | 857, 1724, 1727, 1730, 1733 |
| Tsp45I | GTSAC | 1 cut(s) | 733 |
| TspRI | CASTG | 6 cut(s) | 478, 494, 859, 957, 1218, 1444 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 207, 623 |
| VpaK11BI | GGWCC | 5 cut(s) | 7, 818, 993, 1002, 1763 |
| XceI | RCATGY | 2 cut(s) | 1579, 1743 |
| XmiI | GTMKAC | 1 cut(s) | 1429 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1683 |
| XspI | CTAG | 4 cut(s) | 1038, 1553, 1688, 1865 |
| ZrmI | AGTACT | 1 cut(s) | 581 |