AT4G00300

Di-glucose binding within endoplasmic reticulum

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
128581 .. 130331
1751 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G00300.1

Sequence Viewer

Length: 1437 bp
ATGGCGATCCTCTACACAAGAATCGTATTCCTTCTCTTCGTCTTCCTTGTATCTTCTTCTGCATTTGCCTCTTTCTCTCCTGTCGACGAGTACCTCGTCAACTGCGGCTCCGACGTTGACTCCACCGTCGATAACCGCCGCTTCGTCGGCGACGCATCGTCATCAAACGTCCAATTCTTCTCCTCTGAAGGATCAATCGCTCTCAAAGGAGAAAATCTACCTCAGAACGTTCCCCAAATCTACAGAACCGCTAGGATATTCGCACAACAAGCGAAATACAAGTTCAATGTCAACGAGAAAGGGACTCATATGGTACGTCTCCATTTCAATCGTCTCTATTCCTCTAGAATCGATCTCAATGACGCTCTATTTCACGTTACCGTTAACGGTCACGTCGTCCTAAGGAATTTTAGCGGCGACTCGTCATCTGATTTTGAATCTAGGGTTAGAGAATTCTTGATTTGGGTTGATGTTGGAGAGGTTGTTATTAGGTTTGTTCCTAGTAAAGATTCGAACTTTGCATTCGTTAATGCTATTGAAGTTATCTCTGCGCCTAAGGATTTGATTGGTGACGTTGCAACCTCTGTATCTCATGATGGGACTGAGAAATTCAATGGTTTAGCTAAACAAGCAATGGAGGTTGTGTATAGAGTCAATGTTGGTGGTAGAAAAGTTACTCCTTTTAATGACACATTGTGGAGGACTTGGGTTACTGATGAAGGATTCTTGAAAACCGGTGATGGGTCGTCTGAGAAAAGTTACTTCACCGGGAGGATTAAGTATAGGCGTGGAGGGGCGAGTCGTGAAGTTGGTCCTGATAATGTTTACAACACTGCTCGTGTTGGTAAAAGAAGCAATGGATTGGTTGATATGAGTTGGGGTTTCAAGGTGAATGTGGGTTACAAGTATCTCATCCGGATGCATTTCTGTGACATAGCTAGCAAATCTCTCGGCAGGCTTTATTTCAATGTCTACATTAACGGGAACTTGGCGTATGAAGATTTCGATATCTCATACGCTGCGGATAATGTCCTTGCTTCTCCGTATTACATTGATTTCGTGGTGGATGCTACTGCTGATGACAACAACCCTTCAGGATCGTCGATAACCGTTAGTGTTGGACCATCAAACAAGACTAGTGTTGATGGAAATGGAGTGGATGCGATATTGAACGGTGTTGAGATCATGAAGATGAATAACTCGATGGGTAGTCTTGATGGGTATGTTTCAACAGAGATGATTCTGAGTACTTGCCCAAATAGGAGAAACCTGAGCATATTTATCGCAATGTTGGCGTTTATGTGTATATTTATGAGCTTCTACATTGTGACTCAAAGAAAGAGAGTTAAGGATCAGTATGGCTGGACAAAGCTGTCCATGGACGTGCTTGAAGATAATTCCAAGTCAGGGAATCAATTTACAGCAAGAAAGGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

478

Amino Acids

53.31

Weight (kDa)

7.63

Isoelectric Point (pI)

26.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 32 - 138 9.2e-11 Malectin domain
Malectin_like PF12819 33 - 397 3.4e-24 Malectin-like domain
Malectin PF11721 214 - 356 3e-09 Malectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 125, 1372
AccI GTMKAC 2 cut(s) 84, 972
AccIII TCCGGA 1 cut(s) 915
AciI CCGC 6 cut(s) 105, 136, 139, 249, 414, 1022
AclI AACGTT 1 cut(s) 228
AclWI GGATC 3 cut(s) 199, 1105, 1359
AcsI RAATTY 3 cut(s) 406, 452, 608
AcuI CTGAAG 2 cut(s) 207, 1077
AdeI CACNNNGTG 1 cut(s) 696
AfaI GTAC 3 cut(s) 92, 315, 1249
AfiI CCNNNNNNNGG 2 cut(s) 741, 1407
AgeI ACCGGT 1 cut(s) 734
AhdI GACNNNNNGTC 1 cut(s) 157
AhlI ACTAGT 1 cut(s) 1136
AjiI CACGTC 2 cut(s) 394, 1384
AluBI AGCT 4 cut(s) 623, 938, 1317, 1372
AluI AGCT 4 cut(s) 623, 938, 1317, 1372
Alw26I GTCTC 2 cut(s) 323, 338
AlwI GGATC 3 cut(s) 199, 1105, 1359
Aor13HI TCCGGA 1 cut(s) 915
ApeKI GCWGC 1 cut(s) 1019
ApoI RAATTY 3 cut(s) 406, 452, 608
AsiGI ACCGGT 1 cut(s) 734
AspLEI GCGC 1 cut(s) 553
AspS9I GGNCC 2 cut(s) 812, 1121
AsuC2I CCSGG 1 cut(s) 769
AsuHPI GGTGA 4 cut(s) 581, 749, 757, 901
AsuII TTCGAA 1 cut(s) 512
AsuNHI GCTAGC 1 cut(s) 938
AvaII GGWCC 2 cut(s) 812, 1121
AxyI CCTNAGG 2 cut(s) 401, 555
BaeI ACNNNNGTAYC 2 cut(s) 570, 603
BauI CACGAG 1 cut(s) 837
BbsI GAAGAC 1 cut(s) 34
BbvI GCAGC 1 cut(s) 1006
BccI CCATC 6 cut(s) 590, 734, 1132, 1139, 1198, 1211
BcgI CGANNNNNNTGC 4 cut(s) 931, 965, 1264, 1298
BcnI CCSGG 1 cut(s) 769
BcoDI GTCTC 2 cut(s) 323, 338
BcuI ACTAGT 1 cut(s) 1136
BfaI CTAG 6 cut(s) 252, 345, 441, 501, 939, 1137
BfmI CTRYAG 1 cut(s) 241
BisI GCNGC 4 cut(s) 106, 139, 415, 1020
BlsI GCNGC 4 cut(s) 107, 140, 416, 1021
BmcAI AGTACT 1 cut(s) 1249
Bme1390I CCNGG 1 cut(s) 769
Bme18I GGWCC 2 cut(s) 812, 1121
BmeRI GACNNNNNGTC 1 cut(s) 157
BmgBI CACGTC 2 cut(s) 394, 1384
BmgT120I GGNCC 2 cut(s) 812, 1121
BmiI GGNNCC 1 cut(s) 109
BmrFI CCNGG 1 cut(s) 769
BmsI GCATC 4 cut(s) 164, 909, 1057, 1150
BmtI GCTAGC 1 cut(s) 942
BpiI GAAGAC 1 cut(s) 34
Bpu10I CCTNAGC 1 cut(s) 1271
Bpu14I TTCGAA 1 cut(s) 512
BpuMI CCSGG 1 cut(s) 769
Bsa29I ATCGAT 1 cut(s) 351
BsaJI CCNNGG 1 cut(s) 1377
BsaWI WCCGGW 2 cut(s) 734, 915
BsaXI ACNNNNNCTCC 8 cut(s) 92, 104, 122, 134, 468, 498, 629, 659
Bsc4I CCNNNNNNNGG 2 cut(s) 741, 1407
Bse118I RCCGGY 1 cut(s) 734
Bse21I CCTNAGG 2 cut(s) 401, 555
Bse3DI GCAATG 3 cut(s) 639, 862, 1293
BseAI TCCGGA 1 cut(s) 915
BseCI ATCGAT 1 cut(s) 351
BseDI CCNNGG 1 cut(s) 1377
BseGI GGATG 4 cut(s) 912, 924, 1072, 1165
BseLI CCNNNNNNNGG 2 cut(s) 741, 1407
BseMI GCAATG 3 cut(s) 639, 862, 1293
BseMII CTCAG 5 cut(s) 236, 594, 741, 1235, 1262
BseRI GAGGAG 1 cut(s) 172
BseXI GCAGC 1 cut(s) 1006
BshTI ACCGGT 1 cut(s) 734
BshVI ATCGAT 1 cut(s) 351
BsiSI CCGG 3 cut(s) 735, 768, 916
BslFI GGGAC 2 cut(s) 316, 613
BslI CCNNNNNNNGG 2 cut(s) 741, 1407
BsmAI GTCTC 2 cut(s) 323, 338
BsmBI CGTCTC 2 cut(s) 323, 338
BsmFI GGGAC 2 cut(s) 316, 613
BsmI GAATGC 1 cut(s) 521
Bsp119I TTCGAA 1 cut(s) 512
Bsp13I TCCGGA 1 cut(s) 915
Bsp143I GATC 6 cut(s) 6, 191, 352, 1097, 1182, 1351
Bsp19I CCATGG 1 cut(s) 1377
BspACI CCGC 6 cut(s) 105, 136, 139, 249, 414, 1022
BspCNI CTCAG 5 cut(s) 235, 595, 742, 1236, 1263
BspDI ATCGAT 1 cut(s) 351
BspEI TCCGGA 1 cut(s) 915
BspHI TCATGA 2 cut(s) 592, 1185
BspLI GGNNCC 1 cut(s) 109
BspOI GCTAGC 1 cut(s) 942
BspPI GGATC 3 cut(s) 199, 1105, 1359
BspT104I TTCGAA 1 cut(s) 512
BsrDI GCAATG 3 cut(s) 639, 862, 1293
BsrFI RCCGGY 1 cut(s) 734
BssAI RCCGGY 1 cut(s) 734
BssECI CCNNGG 1 cut(s) 1377
BssMI GATC 6 cut(s) 6, 191, 352, 1097, 1182, 1351
BssSI CACGAG 1 cut(s) 837
BssT1I CCWWGG 1 cut(s) 1377
Bst2BI CACGAG 1 cut(s) 837
Bst4CI ACNGT 5 cut(s) 127, 382, 389, 1111, 1175
Bst6I CTCTTC 1 cut(s) 41
BstBI TTCGAA 1 cut(s) 512
BstC8I GCNNGC 2 cut(s) 940, 956
BstDEI CTNAG 7 cut(s) 222, 401, 555, 603, 750, 1244, 1271
BstDSI CCRYGG 1 cut(s) 1377
BstF5I GGATG 4 cut(s) 912, 924, 1072, 1165
BstHHI GCGC 1 cut(s) 553
BstKTI GATC 6 cut(s) 9, 194, 355, 1100, 1185, 1354
BstMAI GTCTC 2 cut(s) 323, 338
BstMBI GATC 6 cut(s) 6, 191, 352, 1097, 1182, 1351
BstMWI GCNNNNNNNGC 5 cut(s) 147, 269, 629, 1292, 1430
BstSCI CCNGG 1 cut(s) 767
BstSFI CTRYAG 1 cut(s) 241
BstV1I GCAGC 1 cut(s) 1006
BstV2I GAAGAC 1 cut(s) 34
Bsu15I ATCGAT 1 cut(s) 351
Bsu36I CCTNAGG 2 cut(s) 401, 555
BsuTUI ATCGAT 1 cut(s) 351
BtgI CCRYGG 1 cut(s) 1377
BtrI CACGTC 2 cut(s) 394, 1384
BtsCI GGATG 4 cut(s) 912, 924, 1072, 1165
BtsI GCAGTG 1 cut(s) 831
BtsIMutI CAGTG 1 cut(s) 831
Cac8I GCNNGC 2 cut(s) 940, 956
CciI TCATGA 2 cut(s) 592, 1185
CfoI GCGC 1 cut(s) 553
Cfr10I RCCGGY 1 cut(s) 734
Cfr13I GGNCC 2 cut(s) 812, 1121
ClaI ATCGAT 1 cut(s) 351
CseI GACGC 2 cut(s) 161, 371
Csp6I GTAC 3 cut(s) 91, 314, 1248
CspAI ACCGGT 1 cut(s) 734
CspCI CAANNNNNGTGG 2 cut(s) 643, 678
CviAII CATG 3 cut(s) 593, 1186, 1378
CviJI RGCY 8 cut(s) 108, 623, 938, 958, 1317, 1362, 1372, 1433
CviKI_1 RGCY 8 cut(s) 108, 623, 938, 958, 1317, 1362, 1372, 1433
CviQI GTAC 3 cut(s) 91, 314, 1248
DdeI CTNAG 7 cut(s) 222, 401, 555, 603, 750, 1244, 1271
DpnI GATC 6 cut(s) 8, 193, 354, 1099, 1184, 1353
DpnII GATC 6 cut(s) 6, 191, 352, 1097, 1182, 1351
DraIII CACNNNGTG 1 cut(s) 696
DrdI GACNNNNNNGTC 2 cut(s) 125, 1372
DriI GACNNNNNGTC 1 cut(s) 157
DseDI GACNNNNNNGTC 2 cut(s) 125, 1372
Eam1104I CTCTTC 1 cut(s) 41
Eam1105I GACNNNNNGTC 1 cut(s) 157
EarI CTCTTC 1 cut(s) 41
Eco130I CCWWGG 1 cut(s) 1377
Eco32I GATATC 1 cut(s) 1009
Eco47I GGWCC 2 cut(s) 812, 1121
Eco57I CTGAAG 2 cut(s) 207, 1077
Eco81I CCTNAGG 2 cut(s) 401, 555
EcoRI GAATTC 1 cut(s) 452
EcoRV GATATC 1 cut(s) 1009
EcoT14I CCWWGG 1 cut(s) 1377
EcoT22I ATGCAT 1 cut(s) 924
ErhI CCWWGG 1 cut(s) 1377
Esp3I CGTCTC 2 cut(s) 323, 338
FaeI CATG 3 cut(s) 596, 1189, 1381
FalI AAGNNNNNCTT 1 cut(s) 1417
FaqI GGGAC 2 cut(s) 316, 613
FatI CATG 3 cut(s) 592, 1185, 1377
FauNDI CATATG 1 cut(s) 309
FblI GTMKAC 2 cut(s) 84, 972
Fnu4HI GCNGC 4 cut(s) 106, 139, 415, 1020
FokI GGATG 4 cut(s) 899, 931, 1079, 1172
Fsp4HI GCNGC 4 cut(s) 106, 139, 415, 1020
FspBI CTAG 6 cut(s) 252, 345, 441, 501, 939, 1137
GlaI GCGC 1 cut(s) 552
GluI GCNGC 4 cut(s) 106, 139, 415, 1020
HapII CCGG 3 cut(s) 735, 768, 916
HgaI GACGC 2 cut(s) 161, 371
HhaI GCGC 1 cut(s) 553
Hin1II CATG 3 cut(s) 596, 1189, 1381
Hin6I GCGC 1 cut(s) 551
HinP1I GCGC 1 cut(s) 551
HincII GTYRAC 5 cut(s) 85, 100, 118, 292, 385
HindII GTYRAC 5 cut(s) 85, 100, 118, 292, 385
HpaI GTTAAC 1 cut(s) 385
HpaII CCGG 3 cut(s) 735, 768, 916
HphI GGTGA 4 cut(s) 581, 749, 757, 901
Hpy166II GTNNAC 7 cut(s) 85, 100, 118, 292, 385, 826, 973
Hpy188I TCNGA 6 cut(s) 112, 187, 225, 430, 751, 1245
Hpy8I GTNNAC 7 cut(s) 85, 100, 118, 292, 385, 826, 973
Hpy99I CGWCG 7 cut(s) 89, 116, 131, 149, 155, 398, 1105
HpyAV CCTTC 4 cut(s) 41, 182, 713, 1101
HpyCH4III ACNGT 5 cut(s) 127, 382, 389, 1111, 1175
HpyCH4IV ACGT 8 cut(s) 114, 168, 228, 316, 375, 393, 573, 1383
HpyCH4V TGCA 4 cut(s) 62, 521, 578, 922
HpyF10VI GCNNNNNNNGC 5 cut(s) 147, 269, 629, 1292, 1430
HpyF3I CTNAG 7 cut(s) 222, 401, 555, 603, 750, 1244, 1271
HpySE526I ACGT 8 cut(s) 114, 168, 228, 316, 375, 393, 573, 1383
Hsp92II CATG 3 cut(s) 596, 1189, 1381
HspAI GCGC 1 cut(s) 551
Kpn2I TCCGGA 1 cut(s) 915
KspAI GTTAAC 1 cut(s) 385
Kzo9I GATC 6 cut(s) 6, 191, 352, 1097, 1182, 1351
LmnI GCTCC 1 cut(s) 113
Lsp1109I GCAGC 1 cut(s) 1006
LweI GCATC 4 cut(s) 164, 909, 1057, 1150
MaeI CTAG 6 cut(s) 252, 345, 441, 501, 939, 1137
MaeII ACGT 8 cut(s) 114, 168, 228, 316, 375, 393, 573, 1383
MaeIII GTNAC 9 cut(s) 376, 389, 569, 673, 709, 758, 899, 929, 1327
MalI GATC 6 cut(s) 8, 193, 354, 1099, 1184, 1353
MboI GATC 6 cut(s) 6, 191, 352, 1097, 1182, 1351
MboII GAAGA 8 cut(s) 28, 34, 45, 48, 169, 1010, 1201, 1403
MluCI AATT 6 cut(s) 173, 406, 452, 608, 1396, 1415
MlyI GAGTC 6 cut(s) 113, 298, 413, 660, 808, 1324
MmeI TCCRAC 3 cut(s) 135, 454, 1099
Mph1103I ATGCAT 1 cut(s) 924
MroI TCCGGA 1 cut(s) 915
MseI TTAA 6 cut(s) 384, 528, 684, 777, 978, 1347
MslI CAYNNNNRTG 4 cut(s) 917, 927, 1190, 1382
MspI CCGG 3 cut(s) 735, 768, 916
MspR9I CCNGG 1 cut(s) 769
Mva1269I GAATGC 1 cut(s) 521
MwoI GCNNNNNNNGC 5 cut(s) 147, 269, 629, 1292, 1430
NciI CCSGG 1 cut(s) 769
NcoI CCATGG 1 cut(s) 1377
NdeI CATATG 1 cut(s) 309
NdeII GATC 6 cut(s) 6, 191, 352, 1097, 1182, 1351
NheI GCTAGC 1 cut(s) 938
NlaIII CATG 3 cut(s) 596, 1189, 1381
NlaIV GGNNCC 1 cut(s) 109
NmeAIII GCCGAG 1 cut(s) 930
NmuCI GTSAC 4 cut(s) 389, 569, 929, 1327
NsiI ATGCAT 1 cut(s) 924
NspV TTCGAA 1 cut(s) 512
PagI TCATGA 2 cut(s) 592, 1185
PcsI WCGNNNNNNNCGW 2 cut(s) 93, 393
PctI GAATGC 1 cut(s) 521
PfeI GAWTC 7 cut(s) 21, 348, 437, 509, 723, 1240, 1411
PinAI ACCGGT 1 cut(s) 734
PkrI GCNGC 4 cut(s) 107, 140, 416, 1021
PleI GAGTC 6 cut(s) 113, 298, 413, 659, 807, 1324
PpsI GAGTC 6 cut(s) 113, 298, 413, 659, 807, 1324
Psp1406I AACGTT 1 cut(s) 228
PspN4I GGNNCC 1 cut(s) 109
PspPI GGNCC 2 cut(s) 812, 1121
RsaI GTAC 3 cut(s) 92, 315, 1249
RsaNI GTAC 3 cut(s) 91, 314, 1248
RseI CAYNNNNRTG 4 cut(s) 917, 927, 1190, 1382
SalI GTCGAC 1 cut(s) 83
SaqAI TTAA 6 cut(s) 384, 528, 684, 777, 978, 1347
SatI GCNGC 4 cut(s) 106, 139, 415, 1020
Sau3AI GATC 6 cut(s) 6, 191, 352, 1097, 1182, 1351
Sau96I GGNCC 2 cut(s) 812, 1121
ScaI AGTACT 1 cut(s) 1249
SchI GAGTC 6 cut(s) 113, 298, 413, 660, 808, 1324
ScrFI CCNGG 1 cut(s) 769
SfaNI GCATC 4 cut(s) 164, 909, 1057, 1150
SfcI CTRYAG 1 cut(s) 241
SfuI TTCGAA 1 cut(s) 512
SinI GGWCC 2 cut(s) 812, 1121
SmiMI CAYNNNNRTG 4 cut(s) 917, 927, 1190, 1382
SpeI ACTAGT 1 cut(s) 1136
Sse9I AATT 6 cut(s) 173, 406, 452, 608, 1396, 1415
SsiI CCGC 6 cut(s) 105, 136, 139, 249, 414, 1022
SspMI CTAG 6 cut(s) 252, 345, 441, 501, 939, 1137
StyD4I CCNGG 1 cut(s) 767
StyI CCWWGG 1 cut(s) 1377
TaaI ACNGT 5 cut(s) 127, 382, 389, 1111, 1175
TaiI ACGT 8 cut(s) 117, 171, 231, 319, 378, 396, 576, 1386
TaqI TCGA 7 cut(s) 84, 129, 351, 512, 1005, 1103, 1202
TasI AATT 6 cut(s) 173, 406, 452, 608, 1396, 1415
TatI WGTACW 1 cut(s) 1247
TauI GCSGC 3 cut(s) 108, 141, 417
TfiI GAWTC 7 cut(s) 21, 348, 437, 509, 723, 1240, 1411
Tru1I TTAA 6 cut(s) 384, 528, 684, 777, 978, 1347
Tru9I TTAA 6 cut(s) 384, 528, 684, 777, 978, 1347
TscAI CASTG 1 cut(s) 838
TseFI GTSAC 4 cut(s) 389, 569, 929, 1327
TseI GCWGC 1 cut(s) 1019
Tsp45I GTSAC 4 cut(s) 389, 569, 929, 1327
TspDTI ATGAA 4 cut(s) 732, 1011, 1202, 1208
TspGWI ACGGA 1 cut(s) 1032
TspRI CASTG 1 cut(s) 838
VpaK11BI GGWCC 2 cut(s) 812, 1121
XapI RAATTY 3 cut(s) 406, 452, 608
XbaI TCTAGA 1 cut(s) 344
XmiI GTMKAC 2 cut(s) 84, 972
XspI CTAG 6 cut(s) 252, 345, 441, 501, 939, 1137
ZrmI AGTACT 1 cut(s) 1249
Zsp2I ATGCAT 1 cut(s) 924
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.