Rmu_sc0000166.1_g000037

receptor-like protein kinase At5g24010

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000166.1
Physical Location & Seq
Reverse (-)
203260 .. 204678
1419 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000166.1_g000037.1.cds

Sequence Viewer

Length: 1419 bp
atggcgtttccctacacaaacctcacgctctttttctctctactttctctctctaccctctccctcgccctctccgccttctctcccgtcgacaactacctcttcgactgcggctccaccgtggactccaccttcgacgatggccgccgcttcgttccagactcgtccacttcagctcgctcagtttcactccgaaaccaaaaccctaatcccaattcgccccaaatttaccaaaccgctagggttttccggcggccgtccaagtacgagttccagatccacgacccggggacccagatggtacgcctccatttccagagcttcaattcttgtaatttcgattggaatagtgctcaatttcatgtcttggtcaatgggtttgtggttttgaaagtcaacaactttggatttgggggtgtattaggtcccatggttagggagtacttgatttgggtcagtactggaaagcttgtgattcgatttgttcctgataaaaagtcaagctttgcgtttgtgaatgcgattgaggtcgtttctgcacctaaggaccttgttgctgacactgcaatgtatgtgagtgatgggaaagttgtgggttttgatgggttggctaagcaagctcttcaagttgtgcatagggttaatgtgggaggtcataaagtgacgccctttaatgatagtctgtggaggacttggattaccgatgaggagtttttcgattcgggtttggggtcggagagggtttattttggggggaggattaagtatcaggatggaggggctagccgggaagttggtccggataatgtgtacaacagtgcaagattgattcgtagtacgaatgcttcgattcccaatgtgaatatgacatgggtgtttcctgcagtgggtgggtataagtatctggttcggatgcatttctgtgattttgctagtacttcgcttggtttgctgtatttcaatgtttatgtgaatgggaatttggcatatgaagatttggatttgtctaaggctgcaaattatatgttggcttctccgttctatgcggattttgtggttgatggagatgattcggattctttgactgtaagtgtaggaccatcgaacgctagcgtgctatacgccattgatggtatattgaatggtattgagatcatgaagttgaataactcagttgggagtcttgatggcgagcattgtgcagagtgggttttgaggagttcgccaaagggacatgttaatctcttggttcctctagttgctgctgcttgtgtgctgctaagcttatctatggttacgcgtaggaggatcatgaggaagaaggaatctgtggcatggacgaaactgcctgtggatgtttcagaagttaatgccaagcatggaaatatacatgaatcggataaattggaaagcacttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

472

Amino Acids

52.19

Weight (kDa)

6.37

Isoelectric Point (pI)

38.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 90
AccII CGCG 1 cut(s) 1300
AccIII TCCGGA 1 cut(s) 799
AciI CCGC 7 cut(s) 75, 111, 145, 148, 237, 253, 1046
AclWI GGATC 2 cut(s) 271, 1316
AcoI YGGCCR 2 cut(s) 142, 254
AcsI RAATTY 2 cut(s) 225, 979
AcuI CTGAAG 1 cut(s) 156
AcyI GRCGYC 1 cut(s) 665
AfaI GTAC 7 cut(s) 266, 303, 443, 460, 812, 838, 937
AfiI CCNNNNNNNGG 3 cut(s) 286, 435, 887
AflIII ACRYGT 2 cut(s) 1234, 1298
AgsI TTSAA 6 cut(s) 325, 391, 626, 961, 1141, 1165
AjuI GAANNNNNNNTTGG 4 cut(s) 254, 286, 965, 997
AluBI AGCT 6 cut(s) 176, 321, 469, 504, 620, 1284
AluI AGCT 6 cut(s) 176, 321, 469, 504, 620, 1284
Alw21I GWGCWC 1 cut(s) 355
AlwI GGATC 2 cut(s) 271, 1316
Ama87I CYCGRG 1 cut(s) 286
Aor13HI TCCGGA 1 cut(s) 799
AoxI GGCC 2 cut(s) 142, 254
ApeKI GCWGC 4 cut(s) 1013, 1262, 1265, 1276
ApoI RAATTY 2 cut(s) 225, 979
ArsI GACNNNNNNTTYG 2 cut(s) 116, 148
AspS9I GGNCC 5 cut(s) 291, 425, 547, 797, 1097
AsuC2I CCSGG 3 cut(s) 287, 288, 788
AsuNHI GCTAGC 2 cut(s) 782, 1109
AvaI CYCGRG 1 cut(s) 286
AvaII GGWCC 5 cut(s) 291, 425, 547, 797, 1097
AxyI CCTNAGG 1 cut(s) 543
BarI GAAGNNNNNNTAC 2 cut(s) 829, 861
Bbv12I GWGCWC 1 cut(s) 355
BbvI GCAGC 4 cut(s) 1000, 1249, 1252, 1263
BccI CCATC 9 cut(s) 134, 292, 575, 596, 767, 1055, 1108, 1124, 1181
BceAI ACGGC 1 cut(s) 241
BcgI CGANNNNNNTGC 2 cut(s) 1181, 1215
BcnI CCSGG 3 cut(s) 287, 288, 788
BfaI CTAG 5 cut(s) 240, 783, 933, 1110, 1256
BfmI CTRYAG 1 cut(s) 882
BisI GCNGC 8 cut(s) 112, 145, 148, 254, 1014, 1263, 1266, 1277
BlpI GCTNAGC 2 cut(s) 612, 1280
BlsI GCNGC 8 cut(s) 113, 146, 149, 255, 1015, 1264, 1267, 1278
BmcAI AGTACT 3 cut(s) 443, 460, 937
Bme1390I CCNGG 3 cut(s) 287, 288, 788
Bme18I GGWCC 5 cut(s) 291, 425, 547, 797, 1097
BmeT110I CYCGRG 1 cut(s) 286
BmgT120I GGNCC 5 cut(s) 291, 425, 547, 797, 1097
BmiI GGNNCC 5 cut(s) 115, 292, 293, 427, 1251
BmrFI CCNGG 3 cut(s) 287, 288, 788
BmsI GCATC 1 cut(s) 903
BmtI GCTAGC 2 cut(s) 786, 1113
Bpu1102I GCTNAGC 2 cut(s) 612, 1280
BpuMI CCSGG 3 cut(s) 287, 288, 788
BsaHI GRCGYC 1 cut(s) 665
BsaJI CCNNGG 4 cut(s) 120, 286, 287, 429
BsaWI WCCGGW 1 cut(s) 799
BsaXI ACNNNNNCTCC 2 cut(s) 98, 128
Bsc4I CCNNNNNNNGG 3 cut(s) 286, 435, 887
Bse1I ACTGG 1 cut(s) 466
Bse21I CCTNAGG 1 cut(s) 543
Bse3DI GCAATG 1 cut(s) 573
BseAI TCCGGA 1 cut(s) 799
BseDI CCNNGG 4 cut(s) 120, 286, 287, 429
BseGI GGATG 3 cut(s) 778, 918, 1360
BseLI CCNNNNNNNGG 3 cut(s) 286, 435, 887
BseMI GCAATG 1 cut(s) 573
BseMII CTCAG 2 cut(s) 195, 1185
BseNI ACTGG 1 cut(s) 466
BseRI GAGGAG 2 cut(s) 722, 1231
BseX3I CGGCCG 1 cut(s) 254
BseXI GCAGC 4 cut(s) 1000, 1249, 1252, 1263
BsgI GTGCAG 2 cut(s) 522, 1221
Bsh1236I CGCG 1 cut(s) 1300
Bsh1285I CGRYCG 1 cut(s) 257
BshFI GGCC 2 cut(s) 144, 256
BsiEI CGRYCG 1 cut(s) 257
BsiHKAI GWGCWC 1 cut(s) 355
BsiHKCI CYCGRG 1 cut(s) 286
BsiSI CCGG 4 cut(s) 250, 287, 787, 800
BslFI GGGAC 3 cut(s) 304, 411, 1245
BslI CCNNNNNNNGG 3 cut(s) 286, 435, 887
BsmFI GGGAC 3 cut(s) 304, 411, 1245
BsmI GAATGC 2 cut(s) 523, 847
BsnI GGCC 2 cut(s) 144, 256
BsoBI CYCGRG 1 cut(s) 286
Bsp1286I GDGCHC 1 cut(s) 355
Bsp13I TCCGGA 1 cut(s) 799
Bsp1407I TGTACA 1 cut(s) 810
Bsp143I GATC 3 cut(s) 276, 1152, 1308
Bsp1720I GCTNAGC 2 cut(s) 612, 1280
Bsp19I CCATGG 1 cut(s) 429
BspACI CCGC 7 cut(s) 75, 111, 145, 148, 237, 253, 1046
BspANI GGCC 2 cut(s) 144, 256
BspCNI CTCAG 2 cut(s) 194, 1184
BspEI TCCGGA 1 cut(s) 799
BspFNI CGCG 1 cut(s) 1300
BspHI TCATGA 2 cut(s) 1155, 1311
BspLI GGNNCC 5 cut(s) 115, 292, 293, 427, 1251
BspMAI CTGCAG 1 cut(s) 886
BspOI GCTAGC 2 cut(s) 786, 1113
BspPI GGATC 2 cut(s) 271, 1316
BspQI GCTCTTC 1 cut(s) 627
BsrDI GCAATG 1 cut(s) 573
BsrGI TGTACA 1 cut(s) 810
BsrI ACTGG 1 cut(s) 466
BssECI CCNNGG 4 cut(s) 120, 286, 287, 429
BssMI GATC 3 cut(s) 276, 1152, 1308
BssNI GRCGYC 1 cut(s) 665
BssT1I CCWWGG 1 cut(s) 429
Bst4CI ACNGT 3 cut(s) 121, 818, 1087
Bst6I CTCTTC 2 cut(s) 107, 627
BstACI GRCGYC 1 cut(s) 665
BstAUI TGTACA 1 cut(s) 810
BstC8I GCNNGC 6 cut(s) 178, 618, 784, 1111, 1115, 1193
BstDEI CTNAG 6 cut(s) 181, 543, 612, 1008, 1171, 1280
BstDSI CCRYGG 2 cut(s) 120, 429
BstF5I GGATG 3 cut(s) 778, 918, 1360
BstFNI CGCG 1 cut(s) 1300
BstKTI GATC 3 cut(s) 279, 1155, 1311
BstMBI GATC 3 cut(s) 276, 1152, 1308
BstMCI CGRYCG 1 cut(s) 257
BstMWI GCNNNNNNNGC 4 cut(s) 74, 563, 617, 949
BstNSI RCATGY 1 cut(s) 1238
BstSCI CCNGG 3 cut(s) 285, 286, 786
BstSFI CTRYAG 1 cut(s) 882
BstUI CGCG 1 cut(s) 1300
BstV1I GCAGC 4 cut(s) 1000, 1249, 1252, 1263
BstX2I RGATCY 1 cut(s) 276
BstYI RGATCY 1 cut(s) 276
BstZI CGGCCG 1 cut(s) 254
Bsu36I CCTNAGG 1 cut(s) 543
BsuRI GGCC 2 cut(s) 144, 256
BtgI CCRYGG 2 cut(s) 120, 429
BtsCI GGATG 3 cut(s) 778, 918, 1360
BtsI GCAGTG 2 cut(s) 561, 891
BtsIMutI CAGTG 3 cut(s) 561, 823, 891
Cac8I GCNNGC 6 cut(s) 178, 618, 784, 1111, 1115, 1193
CciI TCATGA 2 cut(s) 1155, 1311
Cfr13I GGNCC 5 cut(s) 291, 425, 547, 797, 1097
Cfr9I CCCGGG 1 cut(s) 286
CseI GACGC 1 cut(s) 673
Csp6I GTAC 7 cut(s) 265, 302, 442, 459, 811, 837, 936
CviAII CATG 9 cut(s) 362, 430, 870, 1156, 1235, 1312, 1335, 1379, 1391
CviQI GTAC 7 cut(s) 265, 302, 442, 459, 811, 837, 936
DdeI CTNAG 6 cut(s) 181, 543, 612, 1008, 1171, 1280
DpnI GATC 3 cut(s) 278, 1154, 1310
DpnII GATC 3 cut(s) 276, 1152, 1308
EaeI YGGCCR 2 cut(s) 142, 254
EagI CGGCCG 1 cut(s) 254
Eam1104I CTCTTC 2 cut(s) 107, 627
EarI CTCTTC 2 cut(s) 107, 627
EciI GGCGGA 1 cut(s) 64
EclXI CGGCCG 1 cut(s) 254
Eco130I CCWWGG 1 cut(s) 429
Eco47I GGWCC 5 cut(s) 291, 425, 547, 797, 1097
Eco52I CGGCCG 1 cut(s) 254
Eco57I CTGAAG 1 cut(s) 156
Eco81I CCTNAGG 1 cut(s) 543
Eco88I CYCGRG 1 cut(s) 286
EcoO109I RGGNCCY 3 cut(s) 291, 425, 547
EcoT14I CCWWGG 1 cut(s) 429
EcoT22I ATGCAT 1 cut(s) 918
ErhI CCWWGG 1 cut(s) 429
FaeI CATG 9 cut(s) 365, 433, 873, 1159, 1238, 1315, 1338, 1382, 1394
FalI AAGNNNNNCTT 2 cut(s) 488, 520
FaqI GGGAC 3 cut(s) 304, 411, 1245
FatI CATG 9 cut(s) 361, 429, 869, 1155, 1234, 1311, 1334, 1378, 1390
FauNDI CATATG 1 cut(s) 988
FblI GTMKAC 1 cut(s) 90
Fnu4HI GCNGC 8 cut(s) 112, 145, 148, 254, 1014, 1263, 1266, 1277
FokI GGATG 3 cut(s) 785, 925, 1367
Fsp4HI GCNGC 8 cut(s) 112, 145, 148, 254, 1014, 1263, 1266, 1277
FspBI CTAG 5 cut(s) 240, 783, 933, 1110, 1256
GluI GCNGC 8 cut(s) 112, 145, 148, 254, 1014, 1263, 1266, 1277
HaeIII GGCC 2 cut(s) 144, 256
HapII CCGG 4 cut(s) 250, 287, 787, 800
HgaI GACGC 1 cut(s) 673
Hin1I GRCGYC 1 cut(s) 665
Hin1II CATG 9 cut(s) 365, 433, 873, 1159, 1238, 1315, 1338, 1382, 1394
HincII GTYRAC 2 cut(s) 91, 397
HindII GTYRAC 2 cut(s) 91, 397
HindIII AAGCTT 3 cut(s) 467, 502, 1282
HpaII CCGG 4 cut(s) 250, 287, 787, 800
Hpy166II GTNNAC 5 cut(s) 91, 124, 168, 397, 811
Hpy188I TCNGA 6 cut(s) 194, 736, 912, 1075, 1363, 1399
Hpy188III TCNNGA 9 cut(s) 158, 274, 316, 488, 770, 800, 1156, 1184, 1312
Hpy8I GTNNAC 5 cut(s) 91, 124, 168, 397, 811
Hpy99I CGWCG 2 cut(s) 92, 140
HpyAV CCTTC 3 cut(s) 88, 142, 1315
HpyCH4III ACNGT 3 cut(s) 121, 818, 1087
HpyCH4V TGCA 8 cut(s) 539, 566, 634, 821, 884, 916, 1016, 1202
HpyF10VI GCNNNNNNNGC 4 cut(s) 74, 563, 617, 949
HpyF3I CTNAG 6 cut(s) 181, 543, 612, 1008, 1171, 1280
Hsp92I GRCGYC 1 cut(s) 665
Hsp92II CATG 9 cut(s) 365, 433, 873, 1159, 1238, 1315, 1338, 1382, 1394
KflI GGGWCCC 1 cut(s) 291
Kpn2I TCCGGA 1 cut(s) 799
Kzo9I GATC 3 cut(s) 276, 1152, 1308
LguI GCTCTTC 1 cut(s) 627
LmnI GCTCC 1 cut(s) 119
Lsp1109I GCAGC 4 cut(s) 1000, 1249, 1252, 1263
LweI GCATC 1 cut(s) 903
MaeI CTAG 5 cut(s) 240, 783, 933, 1110, 1256
MaeIII GTNAC 2 cut(s) 661, 1294
MalI GATC 3 cut(s) 278, 1154, 1310
MboI GATC 3 cut(s) 276, 1152, 1308
MboII GAAGA 4 cut(s) 94, 614, 1004, 1330
MflI RGATCY 1 cut(s) 276
MhlI GDGCHC 1 cut(s) 355
MluCI AATT 8 cut(s) 214, 225, 325, 334, 356, 979, 1018, 1403
MluI ACGCGT 1 cut(s) 1298
MlyI GAGTC 3 cut(s) 119, 155, 1189
MmeI TCCRAC 1 cut(s) 714
Mph1103I ATGCAT 1 cut(s) 918
MroI TCCGGA 1 cut(s) 799
MseI TTAA 6 cut(s) 642, 672, 762, 1239, 1368, 1417
MslI CAYNNNNRTG 2 cut(s) 566, 921
MspI CCGG 4 cut(s) 250, 287, 787, 800
MspR9I CCNGG 3 cut(s) 287, 288, 788
Mva1269I GAATGC 2 cut(s) 523, 847
MvnI CGCG 1 cut(s) 1300
MwoI GCNNNNNNNGC 4 cut(s) 74, 563, 617, 949
NciI CCSGG 3 cut(s) 287, 288, 788
NcoI CCATGG 1 cut(s) 429
NdeI CATATG 1 cut(s) 988
NdeII GATC 3 cut(s) 276, 1152, 1308
NheI GCTAGC 2 cut(s) 782, 1109
NlaIII CATG 9 cut(s) 365, 433, 873, 1159, 1238, 1315, 1338, 1382, 1394
NlaIV GGNNCC 5 cut(s) 115, 292, 293, 427, 1251
NmuCI GTSAC 1 cut(s) 661
NsiI ATGCAT 1 cut(s) 918
NspI RCATGY 1 cut(s) 1238
PagI TCATGA 2 cut(s) 1155, 1311
PciI ACATGT 1 cut(s) 1234
PciSI GCTCTTC 1 cut(s) 627
PcsI WCGNNNNNNNCGW 1 cut(s) 845
PctI GAATGC 2 cut(s) 523, 847
PfeI GAWTC 8 cut(s) 475, 719, 829, 850, 1070, 1076, 1325, 1394
PkrI GCNGC 8 cut(s) 113, 146, 149, 255, 1015, 1264, 1267, 1278
PleI GAGTC 3 cut(s) 119, 155, 1188
PpsI GAGTC 3 cut(s) 119, 155, 1188
PpuMI RGGWCCY 3 cut(s) 291, 425, 547
PscI ACATGT 1 cut(s) 1234
Psp5II RGGWCCY 3 cut(s) 291, 425, 547
PspN4I GGNNCC 5 cut(s) 115, 292, 293, 427, 1251
PspPI GGNCC 5 cut(s) 291, 425, 547, 797, 1097
PspPPI RGGWCCY 3 cut(s) 291, 425, 547
PstI CTGCAG 1 cut(s) 886
PsuI RGATCY 1 cut(s) 276
RsaI GTAC 7 cut(s) 266, 303, 443, 460, 812, 838, 937
RsaNI GTAC 7 cut(s) 265, 302, 442, 459, 811, 837, 936
RseI CAYNNNNRTG 2 cut(s) 566, 921
SalI GTCGAC 1 cut(s) 89
SapI GCTCTTC 1 cut(s) 627
SaqAI TTAA 6 cut(s) 642, 672, 762, 1239, 1368, 1417
SatI GCNGC 8 cut(s) 112, 145, 148, 254, 1014, 1263, 1266, 1277
Sau3AI GATC 3 cut(s) 276, 1152, 1308
Sau96I GGNCC 5 cut(s) 291, 425, 547, 797, 1097
ScaI AGTACT 3 cut(s) 443, 460, 937
SchI GAGTC 3 cut(s) 119, 155, 1189
ScrFI CCNGG 3 cut(s) 287, 288, 788
SduI GDGCHC 1 cut(s) 355
SfaNI GCATC 1 cut(s) 903
SfcI CTRYAG 1 cut(s) 882
SinI GGWCC 5 cut(s) 291, 425, 547, 797, 1097
SmaI CCCGGG 1 cut(s) 288
SmiMI CAYNNNNRTG 2 cut(s) 566, 921
Sse9I AATT 8 cut(s) 214, 225, 325, 334, 356, 979, 1018, 1403
SsiI CCGC 7 cut(s) 75, 111, 145, 148, 237, 253, 1046
SspMI CTAG 5 cut(s) 240, 783, 933, 1110, 1256
StyD4I CCNGG 3 cut(s) 285, 286, 786
StyI CCWWGG 1 cut(s) 429
TaaI ACNGT 3 cut(s) 121, 818, 1087
TaqI TCGA 8 cut(s) 90, 105, 135, 339, 478, 717, 848, 1103
TasI AATT 8 cut(s) 214, 225, 325, 334, 356, 979, 1018, 1403
TatI WGTACW 4 cut(s) 441, 458, 810, 935
TauI GCSGC 4 cut(s) 114, 147, 150, 256
TfiI GAWTC 8 cut(s) 475, 719, 829, 850, 1070, 1076, 1325, 1394
Tru1I TTAA 6 cut(s) 642, 672, 762, 1239, 1368, 1417
Tru9I TTAA 6 cut(s) 642, 672, 762, 1239, 1368, 1417
TscAI CASTG 3 cut(s) 568, 823, 891
TseFI GTSAC 1 cut(s) 661
TseI GCWGC 4 cut(s) 1013, 1262, 1265, 1276
Tsp45I GTSAC 1 cut(s) 661
TspDTI ATGAA 4 cut(s) 350, 1005, 1172, 1407
TspGWI ACGGA 1 cut(s) 1026
TspMI CCCGGG 1 cut(s) 286
TspRI CASTG 3 cut(s) 568, 823, 891
VpaK11BI GGWCC 5 cut(s) 291, 425, 547, 797, 1097
XapI RAATTY 2 cut(s) 225, 979
XceI RCATGY 1 cut(s) 1238
XmaI CCCGGG 1 cut(s) 286
XmiI GTMKAC 1 cut(s) 90
XspI CTAG 5 cut(s) 240, 783, 933, 1110, 1256
ZrmI AGTACT 3 cut(s) 443, 460, 937
Zsp2I ATGCAT 1 cut(s) 918
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.