FvH4_7g14970

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
13079036 .. 13080412
1377 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g14970.t1

Sequence Viewer

Length: 1377 bp
ATGGCGCTTCACTCCCTCAACCTCACCCTCTTTCTCTCTCTACTTTCTCTCTCCACCCTCTCCCTCTCCCTCACTCCCTTCTCCCCCGTCGACAACCACCTCCTCGACTGCGGCTCCACCGTCGCCTCCACCCTCGACGACGGCCGCCGCTTCGTCCCGGACTCCTCCGCTTCACCCCTTTCAATTCCCCTCCGCAACCAAAACCCTAACCCTAACCCTAACTCCCCCCAAATCTACCAAACCGCAAGAATTTTCCGGCGGCCGTCCAAGTACGAGTTCCAGATCCGCGACCCGGGGACCCACATGGTCCGCCTCCATTTCCAGAGCTTCAATTCCTGCAATCTCGATTGGAGCACTGCTCGATTTCACGTCCTGGTCAACGGCTTCGTGGCTTTGAAAGTCAACAACTCTGGCGTCTCAGGTGTTATGATTAAGGAGTATTTGATTTGGGTTAGTAATGAAAAGCTTGTGATTCGTTTTATTCCTTTTGAAAAATCATGCTTTGCGTTTGTGAATGCTATTGAGGTTGTTTCTGCGCCTAAGGACCTTGTTGCTGACACTGCAATGTATGTGAGTGATGGTAAAGTTTCGGGTTTTGATGGGTTGGCTAGGCAAGCGATTCAAGTTGTGCATAGGGTTAATGTGGGAGGGAGCAAAGTGACGCCGTTTAATGATAGTTTGTGGAGGACTTGGAGTACTGATGAGGGGTTTTTCCATTCGGGTTTAGGGTCGGAGAGGGTGTATTTTGGGGGGAGGATTAAGTATCAGGCTGGAAGGGCTAGCCGGGAGGTTGGTCCGGATAATGTGTATAATACAGCGAGGTTGATTCGCAGTAGGAATAATTCGGTTGCGAATGTGAACATGACATGGGTGTTTCCTGCTGTTGGGGGGTATAAGTATTTGGTGAGGTTGCATTTCTGTGATATTGCTAGTAGTTCGCTTGGTTTGCTGTATTTCAATGTTTATGTGAATGGGAAGTTGGCGTATGAGGATTTGGATTTGTCCAAGGCTGCGAATTATATGTTGGCTTCTCCGTTTTATGCGGATTTCGTGGTTGATGGGGATGATTCGTATTCTTTGAGTGTGAGTGTAGGGCCGTCGAAGGCCAGTATGCCGTATGCTGTTGATGGTATATTGAATGGTGTTGAGATCATGAAGTTGAATAACTCGGTTGGGAGTCTTGATGGGGAGCATTGTGCAGAGTGGGTTTTGAGGAGTTGGCCAAGAGGACATGTTAGTGTGTTGGTTCCTCTAGTTGCTGCTGCTTGTGTGCTGCTTAGCTTGTCTATGGTAACACGGAGGAGGATCATGAAGAAGAAGGAATCTGTGGCATGGACGAAGCTGCCTGTGGATGTTTCAGAAGTTAATGCTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

459

Amino Acids

50.59

Weight (kDa)

8.88

Isoelectric Point (pI)

33.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 35 - 386 1.5e-26 Malectin-like domain
Malectin PF11721 209 - 347 2e-08 Malectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 90
AccII CGCG 1 cut(s) 288
AccIII TCCGGA 1 cut(s) 796
AclWI GGATC 2 cut(s) 277, 1313
AcoI YGGCCR 3 cut(s) 142, 260, 1220
AcsI RAATTY 1 cut(s) 249
AcyI GRCGYC 2 cut(s) 414, 662
AfaI GTAC 2 cut(s) 272, 697
AfiI CCNNNNNNNGG 2 cut(s) 292, 884
AflIII ACRYGT 1 cut(s) 1231
AgsI TTSAA 8 cut(s) 183, 331, 397, 491, 623, 958, 1138, 1162
AjiI CACGTC 1 cut(s) 370
AjnI CCWGG 1 cut(s) 372
AjuI GAANNNNNNNTTGG 6 cut(s) 260, 292, 962, 994, 1007, 1039
AluBI AGCT 4 cut(s) 327, 466, 1281, 1342
AluI AGCT 4 cut(s) 327, 466, 1281, 1342
Alw21I GWGCWC 1 cut(s) 356
Alw26I GTCTC 1 cut(s) 421
AlwI GGATC 2 cut(s) 277, 1313
Ama87I CYCGRG 1 cut(s) 292
Aor13HI TCCGGA 1 cut(s) 796
AoxI GGCC 5 cut(s) 142, 260, 1094, 1104, 1220
ApeKI GCWGC 5 cut(s) 1010, 1259, 1262, 1273, 1342
ApoI RAATTY 1 cut(s) 249
AspLEI GCGC 2 cut(s) 7, 538
AspS9I GGNCC 5 cut(s) 297, 307, 544, 794, 1094
AsuC2I CCSGG 4 cut(s) 158, 293, 294, 785
AsuHPI GGTGA 3 cut(s) 16, 165, 916
AsuNHI GCTAGC 1 cut(s) 779
AvaI CYCGRG 1 cut(s) 292
AvaII GGWCC 4 cut(s) 297, 307, 544, 794
AxyI CCTNAGG 1 cut(s) 540
BalI TGGCCA 1 cut(s) 1222
Bbv12I GWGCWC 1 cut(s) 356
BbvI GCAGC 5 cut(s) 997, 1246, 1249, 1260, 1329
BccI CCATC 5 cut(s) 572, 593, 1052, 1121, 1178
BceAI ACGGC 6 cut(s) 157, 247, 397, 649, 1081, 1099
BciT130I CCWGG 1 cut(s) 374
BcnI CCSGG 4 cut(s) 158, 293, 294, 785
BcoDI GTCTC 1 cut(s) 421
BfaI CTAG 4 cut(s) 609, 780, 930, 1253
BfoI RGCGCY 1 cut(s) 8
BisI GCNGC 9 cut(s) 112, 145, 148, 260, 1011, 1260, 1263, 1274, 1343
BlpI GCTNAGC 1 cut(s) 1277
BlsI GCNGC 9 cut(s) 113, 146, 149, 261, 1012, 1261, 1264, 1275, 1344
BmcAI AGTACT 1 cut(s) 697
Bme1390I CCNGG 5 cut(s) 158, 293, 294, 374, 785
Bme18I GGWCC 4 cut(s) 297, 307, 544, 794
BmeT110I CYCGRG 1 cut(s) 292
BmgBI CACGTC 1 cut(s) 370
BmgT120I GGNCC 5 cut(s) 297, 307, 544, 794, 1094
BmiI GGNNCC 4 cut(s) 115, 298, 299, 1248
BmrFI CCNGG 5 cut(s) 158, 293, 294, 374, 785
BmtI GCTAGC 1 cut(s) 783
BplI GAGNNNNNCTC 2 cut(s) 343, 375
Bpu1102I GCTNAGC 1 cut(s) 1277
BpuMI CCSGG 4 cut(s) 158, 293, 294, 785
BsaHI GRCGYC 2 cut(s) 414, 662
BsaJI CCNNGG 3 cut(s) 292, 293, 1005
BsaWI WCCGGW 1 cut(s) 796
BsaXI ACNNNNNCTCC 6 cut(s) 98, 128, 206, 236, 725, 755
Bsc4I CCNNNNNNNGG 2 cut(s) 292, 884
Bse1I ACTGG 1 cut(s) 1107
Bse21I CCTNAGG 1 cut(s) 540
Bse3DI GCAATG 1 cut(s) 570
BseAI TCCGGA 1 cut(s) 796
BseBI CCWGG 1 cut(s) 374
BseDI CCNNGG 3 cut(s) 292, 293, 1005
BseGI GGATG 2 cut(s) 1069, 1357
BseLI CCNNNNNNNGG 2 cut(s) 292, 884
BseMI GCAATG 1 cut(s) 570
BseMII CTCAG 1 cut(s) 432
BseNI ACTGG 1 cut(s) 1107
BseRI GAGGAG 4 cut(s) 92, 154, 1228, 1315
BseX3I CGGCCG 2 cut(s) 142, 260
BseXI GCAGC 5 cut(s) 997, 1246, 1249, 1260, 1329
BsgI GTGCAG 1 cut(s) 1218
Bsh1236I CGCG 1 cut(s) 288
Bsh1285I CGRYCG 2 cut(s) 145, 263
BshFI GGCC 5 cut(s) 144, 262, 1096, 1106, 1222
BsiEI CGRYCG 2 cut(s) 145, 263
BsiHKAI GWGCWC 1 cut(s) 356
BsiHKCI CYCGRG 1 cut(s) 292
BsiSI CCGG 5 cut(s) 158, 256, 293, 784, 797
BslFI GGGAC 2 cut(s) 140, 310
BslI CCNNNNNNNGG 2 cut(s) 292, 884
BsmAI GTCTC 1 cut(s) 421
BsmBI CGTCTC 1 cut(s) 421
BsmFI GGGAC 2 cut(s) 140, 310
BsmI GAATGC 1 cut(s) 520
BsnI GGCC 5 cut(s) 144, 262, 1096, 1106, 1222
BsoBI CYCGRG 1 cut(s) 292
Bsp1286I GDGCHC 1 cut(s) 356
Bsp13I TCCGGA 1 cut(s) 796
Bsp143I GATC 3 cut(s) 282, 1149, 1305
Bsp1720I GCTNAGC 1 cut(s) 1277
BspANI GGCC 5 cut(s) 144, 262, 1096, 1106, 1222
BspCNI CTCAG 1 cut(s) 431
BspEI TCCGGA 1 cut(s) 796
BspFNI CGCG 1 cut(s) 288
BspHI TCATGA 2 cut(s) 1152, 1308
BspLI GGNNCC 4 cut(s) 115, 298, 299, 1248
BspOI GCTAGC 1 cut(s) 783
BspPI GGATC 2 cut(s) 277, 1313
BsrDI GCAATG 1 cut(s) 570
BsrI ACTGG 1 cut(s) 1107
BssECI CCNNGG 3 cut(s) 292, 293, 1005
BssMI GATC 3 cut(s) 282, 1149, 1305
BssNI GRCGYC 2 cut(s) 414, 662
BssT1I CCWWGG 1 cut(s) 1005
Bst2UI CCWGG 1 cut(s) 374
Bst4CI ACNGT 1 cut(s) 121
BstACI GRCGYC 2 cut(s) 414, 662
BstC8I GCNNGC 2 cut(s) 615, 781
BstDEI CTNAG 3 cut(s) 418, 540, 1277
BstF5I GGATG 2 cut(s) 1069, 1357
BstFNI CGCG 1 cut(s) 288
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 2 cut(s) 7, 538
BstKTI GATC 3 cut(s) 285, 1152, 1308
BstMAI GTCTC 1 cut(s) 421
BstMBI GATC 3 cut(s) 282, 1149, 1305
BstMCI CGRYCG 2 cut(s) 145, 263
BstMWI GCNNNNNNNGC 4 cut(s) 560, 614, 776, 946
BstNI CCWGG 1 cut(s) 374
BstNSI RCATGY 1 cut(s) 1235
BstSCI CCNGG 5 cut(s) 156, 291, 292, 372, 783
BstUI CGCG 1 cut(s) 288
BstV1I GCAGC 5 cut(s) 997, 1246, 1249, 1260, 1329
BstX2I RGATCY 1 cut(s) 282
BstYI RGATCY 1 cut(s) 282
BstZI CGGCCG 2 cut(s) 142, 260
Bsu36I CCTNAGG 1 cut(s) 540
BsuRI GGCC 5 cut(s) 144, 262, 1096, 1106, 1222
BtrI CACGTC 1 cut(s) 370
BtsCI GGATG 2 cut(s) 1069, 1357
BtsI GCAGTG 2 cut(s) 354, 558
BtsIMutI CAGTG 2 cut(s) 354, 558
Cac8I GCNNGC 2 cut(s) 615, 781
CciI TCATGA 2 cut(s) 1152, 1308
CfoI GCGC 2 cut(s) 7, 538
Cfr13I GGNCC 5 cut(s) 297, 307, 544, 794, 1094
Cfr9I CCCGGG 1 cut(s) 292
CseI GACGC 2 cut(s) 403, 670
Csp6I GTAC 2 cut(s) 271, 696
CviAII CATG 8 cut(s) 304, 498, 862, 867, 1153, 1232, 1309, 1332
CviQI GTAC 2 cut(s) 271, 696
DdeI CTNAG 3 cut(s) 418, 540, 1277
DpnI GATC 3 cut(s) 284, 1151, 1307
DpnII GATC 3 cut(s) 282, 1149, 1305
EaeI YGGCCR 3 cut(s) 142, 260, 1220
EagI CGGCCG 2 cut(s) 142, 260
EciI GGCGGA 1 cut(s) 299
EclXI CGGCCG 2 cut(s) 142, 260
Eco130I CCWWGG 1 cut(s) 1005
Eco47I GGWCC 4 cut(s) 297, 307, 544, 794
Eco52I CGGCCG 2 cut(s) 142, 260
Eco81I CCTNAGG 1 cut(s) 540
Eco88I CYCGRG 1 cut(s) 292
EcoO109I RGGNCCY 2 cut(s) 297, 544
EcoRII CCWGG 1 cut(s) 372
EcoT14I CCWWGG 1 cut(s) 1005
ErhI CCWWGG 1 cut(s) 1005
Esp3I CGTCTC 1 cut(s) 421
FaeI CATG 8 cut(s) 307, 501, 865, 870, 1156, 1235, 1312, 1335
FaqI GGGAC 2 cut(s) 140, 310
FatI CATG 8 cut(s) 303, 497, 861, 866, 1152, 1231, 1308, 1331
FblI GTMKAC 1 cut(s) 90
Fnu4HI GCNGC 9 cut(s) 112, 145, 148, 260, 1011, 1260, 1263, 1274, 1343
FokI GGATG 2 cut(s) 1076, 1364
Fsp4HI GCNGC 9 cut(s) 112, 145, 148, 260, 1011, 1260, 1263, 1274, 1343
FspBI CTAG 4 cut(s) 609, 780, 930, 1253
GlaI GCGC 2 cut(s) 6, 537
GluI GCNGC 9 cut(s) 112, 145, 148, 260, 1011, 1260, 1263, 1274, 1343
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 5 cut(s) 144, 262, 1096, 1106, 1222
HapII CCGG 5 cut(s) 158, 256, 293, 784, 797
HgaI GACGC 2 cut(s) 403, 670
HhaI GCGC 2 cut(s) 7, 538
Hin1I GRCGYC 2 cut(s) 414, 662
Hin1II CATG 8 cut(s) 307, 501, 865, 870, 1156, 1235, 1312, 1335
Hin6I GCGC 2 cut(s) 5, 536
HinP1I GCGC 2 cut(s) 5, 536
HincII GTYRAC 3 cut(s) 91, 379, 403
HindII GTYRAC 3 cut(s) 91, 379, 403
HindIII AAGCTT 1 cut(s) 464
HinfI GANTC 7 cut(s) 161, 472, 619, 826, 1067, 1177, 1322
HpaII CCGG 5 cut(s) 158, 256, 293, 784, 797
HphI GGTGA 3 cut(s) 16, 165, 916
Hpy166II GTNNAC 4 cut(s) 91, 379, 403, 859
Hpy188I TCNGA 2 cut(s) 733, 1360
Hpy188III TCNNGA 7 cut(s) 280, 322, 344, 797, 1153, 1181, 1309
Hpy8I GTNNAC 4 cut(s) 91, 379, 403, 859
Hpy99I CGWCG 5 cut(s) 92, 125, 140, 143, 1102
HpyAV CCTTC 4 cut(s) 88, 768, 1096, 1312
HpyCH4III ACNGT 1 cut(s) 121
HpyCH4IV ACGT 1 cut(s) 369
HpyCH4V TGCA 5 cut(s) 339, 563, 631, 913, 1199
HpyF10VI GCNNNNNNNGC 4 cut(s) 560, 614, 776, 946
HpyF3I CTNAG 3 cut(s) 418, 540, 1277
HpySE526I ACGT 1 cut(s) 369
Hsp92I GRCGYC 2 cut(s) 414, 662
Hsp92II CATG 8 cut(s) 307, 501, 865, 870, 1156, 1235, 1312, 1335
HspAI GCGC 2 cut(s) 5, 536
KflI GGGWCCC 1 cut(s) 297
Kpn2I TCCGGA 1 cut(s) 796
Kzo9I GATC 3 cut(s) 282, 1149, 1305
LmnI GCTCC 4 cut(s) 119, 351, 651, 1189
Lsp1109I GCAGC 5 cut(s) 997, 1246, 1249, 1260, 1329
MaeI CTAG 4 cut(s) 609, 780, 930, 1253
MaeII ACGT 1 cut(s) 369
MaeIII GTNAC 2 cut(s) 658, 1291
MalI GATC 3 cut(s) 284, 1151, 1307
MboI GATC 3 cut(s) 282, 1149, 1305
MboII GAAGA 2 cut(s) 1324, 1327
MflI RGATCY 1 cut(s) 282
MhlI GDGCHC 1 cut(s) 356
MlsI TGGCCA 1 cut(s) 1222
MluCI AATT 6 cut(s) 183, 249, 331, 841, 1015, 1372
MluNI TGGCCA 1 cut(s) 1222
MlyI GAGTC 2 cut(s) 155, 1186
MmeI TCCRAC 1 cut(s) 711
Mox20I TGGCCA 1 cut(s) 1222
MroI TCCGGA 1 cut(s) 796
MscI TGGCCA 1 cut(s) 1222
MseI TTAA 6 cut(s) 432, 639, 669, 759, 1365, 1375
MslI CAYNNNNRTG 3 cut(s) 563, 918, 1236
Msp20I TGGCCA 1 cut(s) 1222
MspI CCGG 5 cut(s) 158, 256, 293, 784, 797
MspR9I CCNGG 5 cut(s) 158, 293, 294, 374, 785
Mva1269I GAATGC 1 cut(s) 520
MvaI CCWGG 1 cut(s) 374
MvnI CGCG 1 cut(s) 288
MwoI GCNNNNNNNGC 4 cut(s) 560, 614, 776, 946
NciI CCSGG 4 cut(s) 158, 293, 294, 785
NdeII GATC 3 cut(s) 282, 1149, 1305
NheI GCTAGC 1 cut(s) 779
NlaIII CATG 8 cut(s) 307, 501, 865, 870, 1156, 1235, 1312, 1335
NlaIV GGNNCC 4 cut(s) 115, 298, 299, 1248
NmuCI GTSAC 1 cut(s) 658
NspI RCATGY 1 cut(s) 1235
PagI TCATGA 2 cut(s) 1152, 1308
PciI ACATGT 1 cut(s) 1231
PctI GAATGC 1 cut(s) 520
PfeI GAWTC 5 cut(s) 472, 619, 826, 1067, 1322
PfoI TCCNGGA 1 cut(s) 156
PkrI GCNGC 9 cut(s) 113, 146, 149, 261, 1012, 1261, 1264, 1275, 1344
PleI GAGTC 2 cut(s) 155, 1185
PpsI GAGTC 2 cut(s) 155, 1185
PpuMI RGGWCCY 2 cut(s) 297, 544
PscI ACATGT 1 cut(s) 1231
Psp5II RGGWCCY 2 cut(s) 297, 544
Psp6I CCWGG 1 cut(s) 372
PspGI CCWGG 1 cut(s) 372
PspN4I GGNNCC 4 cut(s) 115, 298, 299, 1248
PspPI GGNCC 5 cut(s) 297, 307, 544, 794, 1094
PspPPI RGGWCCY 2 cut(s) 297, 544
PsuI RGATCY 1 cut(s) 282
RsaI GTAC 2 cut(s) 272, 697
RsaNI GTAC 2 cut(s) 271, 696
RseI CAYNNNNRTG 3 cut(s) 563, 918, 1236
SalI GTCGAC 1 cut(s) 89
SaqAI TTAA 6 cut(s) 432, 639, 669, 759, 1365, 1375
SatI GCNGC 9 cut(s) 112, 145, 148, 260, 1011, 1260, 1263, 1274, 1343
Sau3AI GATC 3 cut(s) 282, 1149, 1305
Sau96I GGNCC 5 cut(s) 297, 307, 544, 794, 1094
ScaI AGTACT 1 cut(s) 697
SchI GAGTC 2 cut(s) 155, 1186
ScrFI CCNGG 5 cut(s) 158, 293, 294, 374, 785
SduI GDGCHC 1 cut(s) 356
SinI GGWCC 4 cut(s) 297, 307, 544, 794
SmaI CCCGGG 1 cut(s) 294
SmiMI CAYNNNNRTG 3 cut(s) 563, 918, 1236
Sse9I AATT 6 cut(s) 183, 249, 331, 841, 1015, 1372
SspMI CTAG 4 cut(s) 609, 780, 930, 1253
StyD4I CCNGG 5 cut(s) 156, 291, 292, 372, 783
StyI CCWWGG 1 cut(s) 1005
TaaI ACNGT 1 cut(s) 121
TaiI ACGT 1 cut(s) 372
TaqI TCGA 6 cut(s) 90, 105, 135, 345, 361, 1100
TasI AATT 6 cut(s) 183, 249, 331, 841, 1015, 1372
TatI WGTACW 1 cut(s) 695
TauI GCSGC 4 cut(s) 114, 147, 150, 262
TfiI GAWTC 5 cut(s) 472, 619, 826, 1067, 1322
Tru1I TTAA 6 cut(s) 432, 639, 669, 759, 1365, 1375
Tru9I TTAA 6 cut(s) 432, 639, 669, 759, 1365, 1375
TscAI CASTG 2 cut(s) 361, 565
TseFI GTSAC 1 cut(s) 658
TseI GCWGC 5 cut(s) 1010, 1259, 1262, 1273, 1342
Tsp45I GTSAC 1 cut(s) 658
TspDTI ATGAA 3 cut(s) 474, 1169, 1325
TspGWI ACGGA 2 cut(s) 1023, 1312
TspMI CCCGGG 1 cut(s) 292
TspRI CASTG 2 cut(s) 361, 565
VpaK11BI GGWCC 4 cut(s) 297, 307, 544, 794
XapI RAATTY 1 cut(s) 249
XceI RCATGY 1 cut(s) 1235
XmaI CCCGGG 1 cut(s) 292
XmiI GTMKAC 1 cut(s) 90
XspI CTAG 4 cut(s) 609, 780, 930, 1253
ZrmI AGTACT 1 cut(s) 697
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.