Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007801

Physical Location & Seq

Genomic Coordinates Forward (+)

2609066 .. 2611762

Gene Structure 2697 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G05090.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1194 bp

ATGTACATTCTCGACACCGGAGCTCGATTCTCCGCCGTCAGATTCTCACCGGTATTCAATCCTCCTCCAACATCTCTCCGTAGACGATACTTCATCGTAAGAGCTAATCTTCCATTCCCAAAGCATCAAGCTAAGTATCATAAAGAGCTTGAGGTCGCCATTGATGCTGTTGATCGAGCTTGTCGTCTCTGTGTTGATGTCAAAAGATCTCTTTTTTCTTCTAAAGAGAAGATTGTTGAGAAGAATGATCAAACTCCAGTTACAATTGCAGATTTTGGAGTTCAAGCTTTAGTCAGCTTGGAGCTTTCGAAATTGTTTCCTTCAATACCATTAGTGGCTGAGGAAGACTCTCATTTTGTGCGTGCTAATAACCTTGTAAGCTCTGTGGTAAGTGAAGTCAAATCAAAAGCAAGCATTGGAGACAATCACTTGTCTGATGCTGATGTACTTGAAGCAATTGATAGAGGTGGCAAAGATGCTTACACGTTTTGCAACAAACCAGCTACTTATTGGGTTTTGGATCCAATTGATGGCACCAGGGGATTTCTTAAAGGAGATGAGGCTTTATATGTGGTAGGATTGGCCCTTGTTGTAGATAATGAAATTGTGCTAGGAGTCATGGGTTGTCCAAACTGGCCAGGAGATTCTTCAGATGGATCTACTGGAACCCTAATGCTCTCGCATATAGGCTGTGGAACGTGGACCAAGAAGTTACAAAATGTCTCTGGCAATGTAGCCGGTGATTGGATAAGGTGTTTCGTTGATGCTTGTGTTTTAATGAACAAAGCAAGATTTTGTATACAAGAAAGCCAAACCTGGGAATCACTTCCTCTCTCTGGTTTCTTCGACGCAAGTACTGTTTCAGAGGACTTAAAACATAAAGAGATTCTTCTTTTGCCCACATGTTGTGGAAGTTTGTGCAAGTATCTGATGGTAGCTTCTGGCAGAGCATCAGTTTTTCTTCTCCGAGCCAAAACTCAGAGAACAATAAAGTCGTGGGATCATGCTGTTGGGATCATATGTGTACATGAAGCTGGAGGAAAGGTAACAGATTGGGAAGGAGATGAAATAAATTTGGAGGAAGATCAATCAGAAAGGAGGCTCATTTTTCCGGCGGGCGGTGTTGTAGTAAGCAACGGAAGTTTACATAATCAGATTCTTGAGATGATCTCTTCTGCTTCACCAACTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00920 ko01100 ko01120 ko01130 map00920 map01100 map01120 map01130

Pfam Domains

Protein Families

Inositol_P

Protein Analysis

397

Amino Acids

43.53

Weight (kDa)

5.77

Isoelectric Point (pI)

36.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inositol_P	PF00459	68 - 358	6.5e-29	Inositol monophosphatase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007801)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G05090 AT4G05090
fragaria_vesca	FvH4_3g03790
malus_domestica	MD05G1326400.v1.1 MD10G1304400.v1.1 MD10G1304500.v1.1
prunus_persica	Prupe.4G035200_v2.0.a1 Prupe.4G035200_v2.0.a1 Prupe.4G035200_v2.0.a1 Prupe.4G035200_v2.0.a1
pyrus_communis	pycom05g30080 pycom10g25690
rosa_chinensis	RchiOBHm_Chr5g0006041
rosa_laevigata	RLG00000031382
rosa_multiflora	Rmu_co8445649.1_g000001 Rmu_sc0004331.1_g000012
rosa_roxburghii	Rroxscaffold_1G00069930
rosa_rugosa	Rorug04G0419400
rosa_samantha	Rh5AG047000 Rh5AG047100 Rh5BG045800 Rh5CG054500 Rh5DG045500
rosa_wichuraiana	Rw5G004710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	533
AccB7I	CCANNNNNTGG	1 cut(s)	530
AccI	GTMKAC	2 cut(s)	82, 799
AciI	CCGC	3 cut(s)	33, 1115, 1119
AclWI	GGATC	5 cut(s)	515, 528, 664, 1008, 1022
AcoI	YGGCCR	1 cut(s)	635
AcsI	RAATTY	1 cut(s)	1072
AcuI	CTGAAG	1 cut(s)	633
AfaI	GTAC	4 cut(s)	5, 447, 856, 1026
AfiI	CCNNNNNNNGG	5 cut(s)	530, 744, 817, 836, 1118
AflIII	ACRYGT	2 cut(s)	483, 902
AgeI	ACCGGT	1 cut(s)	49
AgsI	TTSAA	4 cut(s)	58, 284, 324, 452
AjnI	CCWGG	3 cut(s)	536, 637, 815
Alw21I	GWGCWC	1 cut(s)	25
Alw26I	GTCTC	3 cut(s)	191, 414, 727
AlwI	GGATC	5 cut(s)	515, 528, 664, 1008, 1022
AoxI	GGCC	2 cut(s)	582, 635
ApoI	RAATTY	1 cut(s)	1072
ArsI	GACNNNNNNTTYG	2 cut(s)	338, 370
AsiGI	ACCGGT	1 cut(s)	49
Asp700I	GAANNNNTTC	1 cut(s)	825
AspS9I	GGNCC	2 cut(s)	583, 702
AsuHPI	GGTGA	3 cut(s)	39, 752, 1173
AsuII	TTCGAA	1 cut(s)	308
AvaII	GGWCC	1 cut(s)	702
BalI	TGGCCA	1 cut(s)	637
BamHI	GGATCC	1 cut(s)	520
BanI	GGYRCC	1 cut(s)	533
BanII	GRGCYC	1 cut(s)	25
BbsI	GAAGAC	1 cut(s)	351
Bbv12I	GWGCWC	1 cut(s)	25
BbvCI	CCTCAGC	1 cut(s)	339
BccI	CCATC	3 cut(s)	524, 647, 925
BceAI	ACGGC	1 cut(s)	20
BciT130I	CCWGG	3 cut(s)	538, 639, 817
BclI	TGATCA	1 cut(s)	247
BcoDI	GTCTC	3 cut(s)	191, 414, 727
BfaI	CTAG	1 cut(s)	611
BglII	AGATCT	1 cut(s)	206
BmcAI	AGTACT	1 cut(s)	856
Bme1390I	CCNGG	3 cut(s)	538, 639, 817
Bme18I	GGWCC	1 cut(s)	702
BmgT120I	GGNCC	2 cut(s)	583, 702
BmiI	GGNNCC	3 cut(s)	522, 535, 667
BmrFI	CCNGG	3 cut(s)	538, 639, 817
BmsI	GCATC	6 cut(s)	133, 154, 427, 466, 754, 959
BpiI	GAAGAC	1 cut(s)	351
BplI	GAGNNNNNCTC	4 cut(s)	332, 364, 1154, 1186
BpmI	CTGGAG	2 cut(s)	240, 1056
Bpu10I	CCTNAGC	1 cut(s)	339
Bpu14I	TTCGAA	1 cut(s)	308
BpuEI	CTTGAG	2 cut(s)	170, 1181
BsaJI	CCNNGG	2 cut(s)	537, 816
BsaWI	WCCGGW	2 cut(s)	17, 49
BsaXI	ACNNNNNCTCC	2 cut(s)	1029, 1059
Bsc4I	CCNNNNNNNGG	5 cut(s)	530, 744, 817, 836, 1118
Bse118I	RCCGGY	2 cut(s)	49, 737
Bse1I	ACTGG	3 cut(s)	257, 638, 667
Bse3DI	GCAATG	1 cut(s)	736
BseBI	CCWGG	3 cut(s)	538, 639, 817
BseDI	CCNNGG	2 cut(s)	537, 816
BseLI	CCNNNNNNNGG	5 cut(s)	530, 744, 817, 836, 1118
BseMI	GCAATG	1 cut(s)	736
BseMII	CTCAG	2 cut(s)	330, 992
BseNI	ACTGG	3 cut(s)	257, 638, 667
BseRI	GAGGAG	1 cut(s)	54
BshFI	GGCC	2 cut(s)	584, 637
BshNI	GGYRCC	1 cut(s)	533
BshTI	ACCGGT	1 cut(s)	49
BsiHKAI	GWGCWC	1 cut(s)	25
BsiSI	CCGG	4 cut(s)	18, 50, 738, 1112
BslI	CCNNNNNNNGG	5 cut(s)	530, 744, 817, 836, 1118
BsmAI	GTCTC	3 cut(s)	191, 414, 727
BsmBI	CGTCTC	1 cut(s)	191
BsnI	GGCC	2 cut(s)	584, 637
Bsp119I	TTCGAA	1 cut(s)	308
Bsp1286I	GDGCHC	1 cut(s)	25
Bsp1407I	TGTACA	2 cut(s)	3, 1024
Bsp143I	GATC	9 cut(s)	172, 206, 247, 520, 656, 1000, 1014, 1084, 1167
BspACI	CCGC	3 cut(s)	33, 1115, 1119
BspANI	GGCC	2 cut(s)	584, 637
BspCNI	CTCAG	2 cut(s)	331, 991
BspLI	GGNNCC	3 cut(s)	522, 535, 667
BspPI	GGATC	5 cut(s)	515, 528, 664, 1008, 1022
BspT104I	TTCGAA	1 cut(s)	308
BspT107I	GGYRCC	1 cut(s)	533
BsrDI	GCAATG	1 cut(s)	736
BsrFI	RCCGGY	2 cut(s)	49, 737
BsrGI	TGTACA	2 cut(s)	3, 1024
BsrI	ACTGG	3 cut(s)	257, 638, 667
BssAI	RCCGGY	2 cut(s)	49, 737
BssECI	CCNNGG	2 cut(s)	537, 816
BssMI	GATC	9 cut(s)	172, 206, 247, 520, 656, 1000, 1014, 1084, 1167
BssNAI	GTATAC	1 cut(s)	800
Bst1107I	GTATAC	1 cut(s)	800
Bst2UI	CCWGG	3 cut(s)	538, 639, 817
Bst4CI	ACNGT	1 cut(s)	859
Bst6I	CTCTTC	1 cut(s)	1177
BstAUI	TGTACA	2 cut(s)	3, 1024
BstBI	TTCGAA	1 cut(s)	308
BstC8I	GCNNGC	3 cut(s)	363, 412, 1117
BstDEI	CTNAG	3 cut(s)	132, 339, 978
BstKTI	GATC	9 cut(s)	175, 209, 250, 523, 659, 1003, 1017, 1087, 1170
BstMAI	GTCTC	3 cut(s)	191, 414, 727
BstMBI	GATC	9 cut(s)	172, 206, 247, 520, 656, 1000, 1014, 1084, 1167
BstMWI	GCNNNNNNNGC	1 cut(s)	164
BstNI	CCWGG	3 cut(s)	538, 639, 817
BstNSI	RCATGY	1 cut(s)	906
BstSCI	CCNGG	3 cut(s)	536, 637, 815
BstV2I	GAAGAC	1 cut(s)	351
BstX2I	RGATCY	3 cut(s)	206, 520, 656
BstYI	RGATCY	3 cut(s)	206, 520, 656
BstZ17I	GTATAC	1 cut(s)	800
BsuRI	GGCC	2 cut(s)	584, 637
Cac8I	GCNNGC	3 cut(s)	363, 412, 1117
Cfr10I	RCCGGY	2 cut(s)	49, 737
Cfr13I	GGNCC	2 cut(s)	583, 702
CseI	GACGC	1 cut(s)	857
Csp6I	GTAC	4 cut(s)	4, 446, 855, 1025
CspAI	ACCGGT	1 cut(s)	49
CviAII	CATG	4 cut(s)	619, 903, 1004, 1028
CviQI	GTAC	4 cut(s)	4, 446, 855, 1025
DdeI	CTNAG	3 cut(s)	132, 339, 978
DpnI	GATC	9 cut(s)	174, 208, 249, 522, 658, 1002, 1016, 1086, 1169
DpnII	GATC	9 cut(s)	172, 206, 247, 520, 656, 1000, 1014, 1084, 1167
EaeI	YGGCCR	1 cut(s)	635
Eam1104I	CTCTTC	1 cut(s)	1177
EarI	CTCTTC	1 cut(s)	1177
EciI	GGCGGA	1 cut(s)	22
Ecl136II	GAGCTC	1 cut(s)	23
Eco24I	GRGCYC	1 cut(s)	25
Eco47I	GGWCC	1 cut(s)	702
Eco53kI	GAGCTC	1 cut(s)	23
Eco57I	CTGAAG	1 cut(s)	633
EcoICRI	GAGCTC	1 cut(s)	23
EcoRII	CCWGG	3 cut(s)	536, 637, 815
EcoT38I	GRGCYC	1 cut(s)	25
Esp3I	CGTCTC	1 cut(s)	191
FaeI	CATG	4 cut(s)	622, 906, 1007, 1031
FalI	AAGNNNNNCTT	2 cut(s)	873, 905
FatI	CATG	4 cut(s)	618, 902, 1003, 1027
FauI	CCCGC	1 cut(s)	1108
FauNDI	CATATG	1 cut(s)	1019
FbaI	TGATCA	1 cut(s)	247
FblI	GTMKAC	2 cut(s)	82, 799
FriOI	GRGCYC	1 cut(s)	25
FspBI	CTAG	1 cut(s)	611
GsuI	CTGGAG	2 cut(s)	240, 1056
HaeIII	GGCC	2 cut(s)	584, 637
HapII	CCGG	4 cut(s)	18, 50, 738, 1112
HgaI	GACGC	1 cut(s)	857
Hin1II	CATG	4 cut(s)	622, 906, 1007, 1031
HindIII	AAGCTT	1 cut(s)	285
HinfI	GANTC	8 cut(s)	27, 42, 347, 615, 644, 821, 886, 1156
HpaII	CCGG	4 cut(s)	18, 50, 738, 1112
HphI	GGTGA	3 cut(s)	39, 752, 1173
Hpy166II	GTNNAC	5 cut(s)	83, 702, 800, 1025, 1145
Hpy188I	TCNGA	9 cut(s)	41, 436, 652, 865, 930, 968, 981, 1093, 1155
Hpy188III	TCNNGA	2 cut(s)	11, 1160
Hpy8I	GTNNAC	5 cut(s)	83, 702, 800, 1025, 1145
Hpy99I	CGWCG	1 cut(s)	851
HpyAV	CCTTC	2 cut(s)	330, 1052
HpyCH4III	ACNGT	1 cut(s)	859
HpyCH4IV	ACGT	2 cut(s)	485, 698
HpyCH4V	TGCA	3 cut(s)	269, 492, 921
HpyF10VI	GCNNNNNNNGC	1 cut(s)	164
HpyF3I	CTNAG	3 cut(s)	132, 339, 978
HpySE526I	ACGT	2 cut(s)	485, 698
Hsp92II	CATG	4 cut(s)	622, 906, 1007, 1031
Ksp22I	TGATCA	1 cut(s)	247
Kzo9I	GATC	9 cut(s)	172, 206, 247, 520, 656, 1000, 1014, 1084, 1167
LmnI	GCTCC	2 cut(s)	20, 301
LweI	GCATC	6 cut(s)	133, 154, 427, 466, 754, 959
MaeI	CTAG	1 cut(s)	611
MaeII	ACGT	2 cut(s)	485, 698
MaeIII	GTNAC	3 cut(s)	259, 711, 1045
MalI	GATC	9 cut(s)	174, 208, 249, 522, 658, 1002, 1016, 1086, 1169
MboI	GATC	9 cut(s)	172, 206, 247, 520, 656, 1000, 1014, 1084, 1167
MfeI	CAATTG	3 cut(s)	264, 456, 525
MflI	RGATCY	3 cut(s)	206, 520, 656
MhlI	GDGCHC	1 cut(s)	25
MlsI	TGGCCA	1 cut(s)	637
MluCI	AATT	6 cut(s)	264, 311, 456, 525, 603, 1072
MluNI	TGGCCA	1 cut(s)	637
MlyI	GAGTC	2 cut(s)	341, 624
MmeI	TCCRAC	1 cut(s)	92
Mox20I	TGGCCA	1 cut(s)	637
MroXI	GAANNNNTTC	1 cut(s)	825
MscI	TGGCCA	1 cut(s)	637
MseI	TTAA	3 cut(s)	549, 776, 872
Msp20I	TGGCCA	1 cut(s)	637
MspI	CCGG	4 cut(s)	18, 50, 738, 1112
MspR9I	CCNGG	3 cut(s)	538, 639, 817
MunI	CAATTG	3 cut(s)	264, 456, 525
MvaI	CCWGG	3 cut(s)	538, 639, 817
MwoI	GCNNNNNNNGC	1 cut(s)	164
NdeI	CATATG	1 cut(s)	1019
NdeII	GATC	9 cut(s)	172, 206, 247, 520, 656, 1000, 1014, 1084, 1167
NlaIII	CATG	4 cut(s)	622, 906, 1007, 1031
NlaIV	GGNNCC	3 cut(s)	522, 535, 667
NspI	RCATGY	1 cut(s)	906
NspV	TTCGAA	1 cut(s)	308
PciI	ACATGT	1 cut(s)	902
PcsI	WCGNNNNNNNCGW	1 cut(s)	181
PdmI	GAANNNNTTC	1 cut(s)	825
PfeI	GAWTC	6 cut(s)	27, 42, 644, 821, 886, 1156
PflMI	CCANNNNNTGG	1 cut(s)	530
PinAI	ACCGGT	1 cut(s)	49
PleI	GAGTC	2 cut(s)	341, 623
PpsI	GAGTC	2 cut(s)	341, 623
PscI	ACATGT	1 cut(s)	902
Psp124BI	GAGCTC	1 cut(s)	25
Psp6I	CCWGG	3 cut(s)	536, 637, 815
PspGI	CCWGG	3 cut(s)	536, 637, 815
PspN4I	GGNNCC	3 cut(s)	522, 535, 667
PspPI	GGNCC	2 cut(s)	583, 702
PsuI	RGATCY	3 cut(s)	206, 520, 656
RsaI	GTAC	4 cut(s)	5, 447, 856, 1026
RsaNI	GTAC	4 cut(s)	4, 446, 855, 1025
SacI	GAGCTC	1 cut(s)	25
SaqAI	TTAA	3 cut(s)	549, 776, 872
Sau3AI	GATC	9 cut(s)	172, 206, 247, 520, 656, 1000, 1014, 1084, 1167
Sau96I	GGNCC	2 cut(s)	583, 702
ScaI	AGTACT	1 cut(s)	856
SchI	GAGTC	2 cut(s)	341, 624
ScrFI	CCNGG	3 cut(s)	538, 639, 817
SduI	GDGCHC	1 cut(s)	25
SfaNI	GCATC	6 cut(s)	133, 154, 427, 466, 754, 959
SfuI	TTCGAA	1 cut(s)	308
SinI	GGWCC	1 cut(s)	702
SmlI	CTYRAG	2 cut(s)	149, 1160
SmoI	CTYRAG	2 cut(s)	149, 1160
Sse9I	AATT	6 cut(s)	264, 311, 456, 525, 603, 1072
SsiI	CCGC	3 cut(s)	33, 1115, 1119
SspMI	CTAG	1 cut(s)	611
SstI	GAGCTC	1 cut(s)	25
StyD4I	CCNGG	3 cut(s)	536, 637, 815
TaaI	ACNGT	1 cut(s)	859
TaiI	ACGT	2 cut(s)	488, 701
TaqI	TCGA	5 cut(s)	12, 25, 175, 308, 846
TasI	AATT	6 cut(s)	264, 311, 456, 525, 603, 1072
TatI	WGTACW	4 cut(s)	3, 445, 854, 1024
TfiI	GAWTC	6 cut(s)	27, 42, 644, 821, 886, 1156
Tru1I	TTAA	3 cut(s)	549, 776, 872
Tru9I	TTAA	3 cut(s)	549, 776, 872
TspDTI	ATGAA	5 cut(s)	82, 615, 794, 1044, 1080
TspGWI	ACGGA	2 cut(s)	68, 1152
Van91I	CCANNNNNTGG	1 cut(s)	530
VpaK11BI	GGWCC	1 cut(s)	702
XapI	RAATTY	1 cut(s)	1072
XceI	RCATGY	1 cut(s)	906
XcmI	CCANNNNNNNNNTGG	1 cut(s)	507
XmiI	GTMKAC	2 cut(s)	82, 799
XmnI	GAANNNNTTC	1 cut(s)	825
XspI	CTAG	1 cut(s)	611
ZrmI	AGTACT	1 cut(s)	856

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.