Rmu_sc0004331.1_g000012

PAP-specific phosphatase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004331.1
Physical Location & Seq
Forward (+)
71900 .. 74810
2911 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004331.1_g000012.1.cds

Sequence Viewer

Length: 1287 bp
atgattctcgcccactcctcccgccatttctccaccgtccgattcaccctccccacctcatcttcccctgcgcctccccacacccgaactctcaccttcacctccacctctctccgctgccgcctctccaatttcaaatgcagctcccgcctcccattcgccgccgaggccgccaagcactacagagaactcgaagccgccatcgccgtcgtcgaaaccgcctccagcctctgcgtcgaggtccaaacggcgttggcgttggcgtcgagcgccggcggggttctcgagaagaacgaccagactccggtcaccgtcgccgatttcagcgtccaggcgctgatcagtttagagctggggagacgattcccgtcgattccgttggtggcggaggaggactcggcgtcggtgagggagaataatctggtggagccggtggtgagtgccgtggttgataaggccggcgccggggaaacgccgttgacggcggaggatgtgttggaggcgattgatagaggcggaccggaggcttttagattcggagctcagccggcgacgtattggttactggatccaattgatggcacaagaggatttgtgaaggggaacaaggcgttgtttgtggtaggtttggctcttgtagttgacggggagattgtattaggtgtcatgggctgcccgcactggcaggaatcgaacaaatgtatcaatggagtccaggaagagaagagcattccatctgaaacagggcttcttatggtctctcatattggttgtggcacgtggacaagaagtttatcatctgtgctaaatggcatgccaaagattccttattcttggacccgttgctttgttgatggctgttctgtggtggctcaggcacgcttttgtatcatagagagtgagccatgggaggcattgccaccgtcagctttctttacctcaacaactaatgctgatagtgttggtgagggtcaagttctcgttttgaaaccttgttgtggaagtttatgcaagtatttattggtggcttcaggtaggggttctgtcttcattcagcgacagaaagaaaaagttattaaggcttgggatcacgctgttggtattatatgtgtgcttgaagcagggggaagggcaactgactggaaagggaatcaagttgatcttgcagcagatgaagccggacggaggagtatataccctcaagatggtatccttgtgagtaatggcaaattacataaccagcttctggaactgatatcttccacttcatcaacagttttaggctag

Protein Analysis

428

Amino Acids

45.72

Weight (kDa)

5.7

Isoelectric Point (pI)

32.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 461
AccB7I CCANNNNNTGG 2 cut(s) 578, 1246
AclWI GGATC 3 cut(s) 563, 576, 1095
AcuI CTGAAG 1 cut(s) 1014
AcvI CACGTG 1 cut(s) 780
AcyI GRCGYC 3 cut(s) 263, 401, 462
AfiI CCNNNNNNNGG 7 cut(s) 304, 465, 578, 998, 1185, 1205, 1246
AgsI TTSAA 3 cut(s) 136, 988, 1118
AhdI GACNNNNNGTC 1 cut(s) 400
AjnI CCWGG 2 cut(s) 330, 714
AluBI AGCT 5 cut(s) 144, 352, 542, 929, 1243
AluI AGCT 5 cut(s) 144, 352, 542, 929, 1243
Alw21I GWGCWC 1 cut(s) 544
Alw26I GTCTC 2 cut(s) 352, 763
AlwI GGATC 3 cut(s) 563, 576, 1095
AlwNI CAGNNNCTG 3 cut(s) 231, 337, 1246
Ama87I CYCGRG 1 cut(s) 284
AoxI GGCC 2 cut(s) 168, 456
ApeKI GCWGC 4 cut(s) 117, 141, 672, 1166
AspLEI GCGC 4 cut(s) 73, 272, 337, 464
AspS9I GGNCC 3 cut(s) 241, 518, 837
AsuC2I CCSGG 1 cut(s) 466
AsuHPI GGTGA 7 cut(s) 37, 85, 91, 301, 418, 448, 977
AvaI CYCGRG 1 cut(s) 284
AvaII GGWCC 3 cut(s) 241, 518, 837
BaeI ACNNNNGTAYC 2 cut(s) 685, 718
BamHI GGATCC 1 cut(s) 568
BanI GGYRCC 1 cut(s) 461
BanII GRGCYC 1 cut(s) 544
BbrPI CACGTG 1 cut(s) 780
BbsI GAAGAC 1 cut(s) 1039
Bbv12I GWGCWC 1 cut(s) 544
BbvI GCAGC 4 cut(s) 104, 153, 659, 1178
BccI CCATC 5 cut(s) 209, 572, 742, 848, 1199
BceAI ACGGC 5 cut(s) 191, 264, 428, 460, 498
BciT130I CCWGG 2 cut(s) 332, 716
BciVI GTATCC 1 cut(s) 1220
BclI TGATCA 1 cut(s) 339
BcnI CCSGG 1 cut(s) 466
BcoDI GTCTC 2 cut(s) 352, 763
BfaI CTAG 1 cut(s) 1285
BfmI CTRYAG 1 cut(s) 181
BfoI RGCGCY 3 cut(s) 273, 338, 465
BfuI GTATCC 1 cut(s) 1220
BglI GCCNNNNNGGC 1 cut(s) 167
BisI GCNGC 8 cut(s) 118, 121, 142, 162, 171, 198, 673, 1167
BlpI GCTNAGC 1 cut(s) 543
BlsI GCNGC 8 cut(s) 119, 122, 143, 163, 172, 199, 674, 1168
Bme1390I CCNGG 3 cut(s) 332, 466, 716
Bme18I GGWCC 3 cut(s) 241, 518, 837
BmeRI GACNNNNNGTC 1 cut(s) 400
BmeT110I CYCGRG 1 cut(s) 284
BmgT120I GGNCC 3 cut(s) 241, 518, 837
BmiI GGNNCC 4 cut(s) 429, 463, 570, 839
BmrFI CCNGG 3 cut(s) 332, 466, 716
BoxI GACNNNNGTC 1 cut(s) 305
BpiI GAAGAC 1 cut(s) 1039
BplI GAGNNNNNCTC 2 cut(s) 380, 412
BpmI CTGGAG 1 cut(s) 208
Bpu10I CCTNAGC 1 cut(s) 873
Bpu1102I GCTNAGC 1 cut(s) 543
BpuEI CTTGAG 1 cut(s) 1185
BpuMI CCSGG 1 cut(s) 466
BsaAI YACGTR 1 cut(s) 780
BsaHI GRCGYC 3 cut(s) 263, 401, 462
BsaI GGTCTC 1 cut(s) 763
BsaJI CCNNGG 4 cut(s) 165, 444, 465, 905
BsaWI WCCGGW 2 cut(s) 304, 520
BsaXI ACNNNNNCTCC 2 cut(s) 479, 509
Bsc4I CCNNNNNNNGG 7 cut(s) 304, 465, 578, 998, 1185, 1205, 1246
Bse118I RCCGGY 4 cut(s) 272, 430, 458, 547
Bse1I ACTGG 3 cut(s) 570, 686, 1145
Bse3DI GCAATG 1 cut(s) 914
BseBI CCWGG 2 cut(s) 332, 716
BseDI CCNNGG 4 cut(s) 165, 444, 465, 905
BseGI GGATG 1 cut(s) 496
BseLI CCNNNNNNNGG 7 cut(s) 304, 465, 578, 998, 1185, 1205, 1246
BseMI GCAATG 1 cut(s) 914
BseMII CTCAG 2 cut(s) 557, 887
BseNI ACTGG 3 cut(s) 570, 686, 1145
BseRI GAGGAG 3 cut(s) 7, 404, 1201
BseXI GCAGC 4 cut(s) 104, 153, 659, 1178
BseYI CCCAGC 1 cut(s) 352
BshFI GGCC 2 cut(s) 170, 458
BshNI GGYRCC 1 cut(s) 461
BsiHKAI GWGCWC 1 cut(s) 544
BsiHKCI CYCGRG 1 cut(s) 284
BsiSI CCGG 8 cut(s) 273, 305, 431, 459, 465, 521, 548, 1179
BslI CCNNNNNNNGG 7 cut(s) 304, 465, 578, 998, 1185, 1205, 1246
BsmAI GTCTC 2 cut(s) 352, 763
BsmBI CGTCTC 1 cut(s) 352
BsmI GAATGC 1 cut(s) 729
BsnI GGCC 2 cut(s) 170, 458
Bso31I GGTCTC 1 cut(s) 763
BsoBI CYCGRG 1 cut(s) 284
Bsp1286I GDGCHC 1 cut(s) 544
Bsp143I GATC 4 cut(s) 339, 568, 1087, 1159
Bsp1720I GCTNAGC 1 cut(s) 543
Bsp19I CCATGG 1 cut(s) 905
BspANI GGCC 2 cut(s) 170, 458
BspCNI CTCAG 2 cut(s) 556, 886
BspLI GGNNCC 4 cut(s) 429, 463, 570, 839
BspPI GGATC 3 cut(s) 563, 576, 1095
BspQI GCTCTTC 1 cut(s) 719
BspT107I GGYRCC 1 cut(s) 461
BspTNI GGTCTC 1 cut(s) 763
BsrDI GCAATG 1 cut(s) 914
BsrFI RCCGGY 4 cut(s) 272, 430, 458, 547
BsrI ACTGG 3 cut(s) 570, 686, 1145
BssAI RCCGGY 4 cut(s) 272, 430, 458, 547
BssECI CCNNGG 4 cut(s) 165, 444, 465, 905
BssMI GATC 4 cut(s) 339, 568, 1087, 1159
BssNI GRCGYC 3 cut(s) 263, 401, 462
BssT1I CCWWGG 1 cut(s) 905
Bst2UI CCWGG 2 cut(s) 332, 716
Bst4CI ACNGT 4 cut(s) 37, 313, 924, 1276
Bst6I CTCTTC 2 cut(s) 714, 719
BstACI GRCGYC 3 cut(s) 263, 401, 462
BstBAI YACGTR 1 cut(s) 780
BstC8I GCNNGC 6 cut(s) 274, 460, 549, 677, 815, 880
BstDEI CTNAG 2 cut(s) 543, 873
BstDSI CCRYGG 2 cut(s) 444, 905
BstEII GGTNACC 1 cut(s) 307
BstF5I GGATG 1 cut(s) 496
BstH2I RGCGCY 3 cut(s) 273, 338, 465
BstHHI GCGC 4 cut(s) 73, 272, 337, 464
BstKTI GATC 4 cut(s) 342, 571, 1090, 1162
BstMAI GTCTC 2 cut(s) 352, 763
BstMBI GATC 4 cut(s) 339, 568, 1087, 1159
BstMWI GCNNNNNNNGC 7 cut(s) 147, 167, 170, 203, 269, 548, 1175
BstNI CCWGG 2 cut(s) 332, 716
BstNSI RCATGY 1 cut(s) 817
BstPAI GACNNNNGTC 1 cut(s) 305
BstPI GGTNACC 1 cut(s) 307
BstSCI CCNGG 3 cut(s) 330, 464, 714
BstSFI CTRYAG 1 cut(s) 181
BstV1I GCAGC 4 cut(s) 104, 153, 659, 1178
BstV2I GAAGAC 1 cut(s) 1039
BstX2I RGATCY 1 cut(s) 568
BstYI RGATCY 1 cut(s) 568
BsuI GTATCC 1 cut(s) 1220
BsuRI GGCC 2 cut(s) 170, 458
BtgI CCRYGG 2 cut(s) 444, 905
BtgZI GCGATG 1 cut(s) 187
BtsCI GGATG 1 cut(s) 496
BtsIMutI CAGTG 1 cut(s) 679
Cac8I GCNNGC 6 cut(s) 274, 460, 549, 677, 815, 880
CaiI CAGNNNCTG 3 cut(s) 231, 337, 1246
CfoI GCGC 4 cut(s) 73, 272, 337, 464
Cfr10I RCCGGY 4 cut(s) 272, 430, 458, 547
Cfr13I GGNCC 3 cut(s) 241, 518, 837
CpoI CGGWCCG 1 cut(s) 518
CseI GACGC 4 cut(s) 223, 252, 316, 390
CspI CGGWCCG 1 cut(s) 518
CviAII CATG 3 cut(s) 667, 814, 906
DdeI CTNAG 2 cut(s) 543, 873
DinI GGCGCC 1 cut(s) 463
DpnI GATC 4 cut(s) 341, 570, 1089, 1161
DpnII GATC 4 cut(s) 339, 568, 1087, 1159
DriI GACNNNNNGTC 1 cut(s) 400
Eam1104I CTCTTC 2 cut(s) 714, 719
Eam1105I GACNNNNNGTC 1 cut(s) 400
EarI CTCTTC 2 cut(s) 714, 719
EciI GGCGGA 3 cut(s) 401, 500, 531
Ecl136II GAGCTC 1 cut(s) 542
Eco130I CCWWGG 1 cut(s) 905
Eco24I GRGCYC 1 cut(s) 544
Eco31I GGTCTC 1 cut(s) 763
Eco32I GATATC 1 cut(s) 1257
Eco47I GGWCC 3 cut(s) 241, 518, 837
Eco53kI GAGCTC 1 cut(s) 542
Eco57I CTGAAG 1 cut(s) 1014
Eco72I CACGTG 1 cut(s) 780
Eco88I CYCGRG 1 cut(s) 284
Eco91I GGTNACC 1 cut(s) 307
EcoICRI GAGCTC 1 cut(s) 542
EcoO65I GGTNACC 1 cut(s) 307
EcoRII CCWGG 2 cut(s) 330, 714
EcoRV GATATC 1 cut(s) 1257
EcoT14I CCWWGG 1 cut(s) 905
EcoT38I GRGCYC 1 cut(s) 544
EgeI GGCGCC 1 cut(s) 463
EheI GGCGCC 1 cut(s) 463
ErhI CCWWGG 1 cut(s) 905
Esp3I CGTCTC 1 cut(s) 352
FaeI CATG 3 cut(s) 670, 817, 909
FalI AAGNNNNNCTT 2 cut(s) 1146, 1178
FatI CATG 3 cut(s) 666, 813, 905
FauI CCCGC 4 cut(s) 29, 155, 269, 684
FbaI TGATCA 1 cut(s) 339
Fnu4HI GCNGC 8 cut(s) 118, 121, 142, 162, 171, 198, 673, 1167
FokI GGATG 1 cut(s) 503
FriOI GRGCYC 1 cut(s) 544
Fsp4HI GCNGC 8 cut(s) 118, 121, 142, 162, 171, 198, 673, 1167
FspBI CTAG 1 cut(s) 1285
GlaI GCGC 4 cut(s) 72, 271, 336, 463
GluI GCNGC 8 cut(s) 118, 121, 142, 162, 171, 198, 673, 1167
GsaI CCCAGC 1 cut(s) 356
GsuI CTGGAG 1 cut(s) 208
HaeII RGCGCY 3 cut(s) 273, 338, 465
HaeIII GGCC 2 cut(s) 170, 458
HapII CCGG 8 cut(s) 273, 305, 431, 459, 465, 521, 548, 1179
HgaI GACGC 4 cut(s) 223, 252, 316, 390
HhaI GCGC 4 cut(s) 73, 272, 337, 464
Hin1I GRCGYC 3 cut(s) 263, 401, 462
Hin1II CATG 3 cut(s) 670, 817, 909
Hin6I GCGC 4 cut(s) 71, 270, 335, 462
HinP1I GCGC 4 cut(s) 71, 270, 335, 462
HincII GTYRAC 2 cut(s) 480, 643
HindII GTYRAC 2 cut(s) 480, 643
HpaII CCGG 8 cut(s) 273, 305, 431, 459, 465, 521, 548, 1179
HphI GGTGA 7 cut(s) 37, 85, 91, 301, 418, 448, 977
Hpy166II GTNNAC 3 cut(s) 480, 643, 783
Hpy188I TCNGA 3 cut(s) 41, 539, 739
Hpy188III TCNNGA 4 cut(s) 284, 286, 1202, 1247
Hpy8I GTNNAC 3 cut(s) 480, 643, 783
Hpy99I CGWCG 8 cut(s) 212, 215, 239, 268, 317, 373, 406, 556
HpyAV CCTTC 3 cut(s) 106, 592, 1122
HpyCH4III ACNGT 4 cut(s) 37, 313, 924, 1276
HpyCH4IV ACGT 2 cut(s) 554, 779
HpyCH4V TGCA 3 cut(s) 141, 1011, 1166
HpyF10VI GCNNNNNNNGC 7 cut(s) 147, 167, 170, 203, 269, 548, 1175
HpyF3I CTNAG 2 cut(s) 543, 873
HpySE526I ACGT 2 cut(s) 554, 779
Hsp92I GRCGYC 3 cut(s) 263, 401, 462
Hsp92II CATG 3 cut(s) 670, 817, 909
HspAI GCGC 4 cut(s) 71, 270, 335, 462
KasI GGCGCC 1 cut(s) 461
KroI GCCGGC 3 cut(s) 272, 458, 547
KroNI GCCGGC 3 cut(s) 274, 460, 549
Ksp22I TGATCA 1 cut(s) 339
Kzo9I GATC 4 cut(s) 339, 568, 1087, 1159
LguI GCTCTTC 1 cut(s) 719
LmnI GCTCC 3 cut(s) 149, 427, 539
Lsp1109I GCAGC 4 cut(s) 104, 153, 659, 1178
MaeI CTAG 1 cut(s) 1285
MaeII ACGT 2 cut(s) 554, 779
MaeIII GTNAC 2 cut(s) 307, 561
MalI GATC 4 cut(s) 341, 570, 1089, 1161
MboI GATC 4 cut(s) 339, 568, 1087, 1159
MboII GAAGA 6 cut(s) 54, 301, 731, 736, 1039, 1251
MfeI CAATTG 1 cut(s) 573
MflI RGATCY 1 cut(s) 568
MhlI GDGCHC 1 cut(s) 544
MluCI AATT 3 cut(s) 130, 573, 1229
Mly113I GGCGCC 1 cut(s) 462
MlyI GAGTC 3 cut(s) 295, 389, 720
MmeI TCCRAC 1 cut(s) 477
MreI CGCCGGCG 1 cut(s) 272
MroNI GCCGGC 3 cut(s) 272, 458, 547
MseI TTAA 1 cut(s) 1077
MspA1I CMGCKG 1 cut(s) 117
MspI CCGG 8 cut(s) 273, 305, 431, 459, 465, 521, 548, 1179
MspR9I CCNGG 3 cut(s) 332, 466, 716
MunI CAATTG 1 cut(s) 573
Mva1269I GAATGC 1 cut(s) 729
MvaI CCWGG 2 cut(s) 332, 716
MwoI GCNNNNNNNGC 7 cut(s) 147, 167, 170, 203, 269, 548, 1175
NaeI GCCGGC 3 cut(s) 274, 460, 549
NarI GGCGCC 1 cut(s) 462
NciI CCSGG 1 cut(s) 466
NcoI CCATGG 1 cut(s) 905
NdeII GATC 4 cut(s) 339, 568, 1087, 1159
NgoMIV GCCGGC 3 cut(s) 272, 458, 547
NlaIII CATG 3 cut(s) 670, 817, 909
NlaIV GGNNCC 4 cut(s) 429, 463, 570, 839
NmeAIII GCCGAG 2 cut(s) 190, 377
NmuCI GTSAC 1 cut(s) 307
NspI RCATGY 1 cut(s) 817
PaeI GCATGC 1 cut(s) 817
PaeR7I CTCGAG 1 cut(s) 284
PciSI GCTCTTC 1 cut(s) 719
PcsI WCGNNNNNNNCGW 3 cut(s) 210, 254, 291
PctI GAATGC 1 cut(s) 729
PdiI GCCGGC 3 cut(s) 274, 460, 549
PfeI GAWTC 8 cut(s) 4, 42, 363, 373, 534, 689, 823, 1150
PflMI CCANNNNNTGG 2 cut(s) 578, 1246
PfoI TCCNGGA 1 cut(s) 714
PkrI GCNGC 8 cut(s) 119, 122, 143, 163, 172, 199, 674, 1168
PleI GAGTC 3 cut(s) 295, 389, 719
PluTI GGCGCC 1 cut(s) 465
PmaCI CACGTG 1 cut(s) 780
PmlI CACGTG 1 cut(s) 780
PpsI GAGTC 3 cut(s) 295, 389, 719
Ppu21I YACGTR 1 cut(s) 780
PshAI GACNNNNGTC 1 cut(s) 305
Psp124BI GAGCTC 1 cut(s) 544
Psp6I CCWGG 2 cut(s) 330, 714
PspCI CACGTG 1 cut(s) 780
PspEI GGTNACC 1 cut(s) 307
PspFI CCCAGC 1 cut(s) 352
PspGI CCWGG 2 cut(s) 330, 714
PspN4I GGNNCC 4 cut(s) 429, 463, 570, 839
PspPI GGNCC 3 cut(s) 241, 518, 837
PstNI CAGNNNCTG 3 cut(s) 231, 337, 1246
PsuI RGATCY 1 cut(s) 568
Rsr2I CGGWCCG 1 cut(s) 518
RsrII CGGWCCG 1 cut(s) 518
SacI GAGCTC 1 cut(s) 544
SapI GCTCTTC 1 cut(s) 719
SaqAI TTAA 1 cut(s) 1077
SatI GCNGC 8 cut(s) 118, 121, 142, 162, 171, 198, 673, 1167
Sau3AI GATC 4 cut(s) 339, 568, 1087, 1159
Sau96I GGNCC 3 cut(s) 241, 518, 837
SchI GAGTC 3 cut(s) 295, 389, 720
ScrFI CCNGG 3 cut(s) 332, 466, 716
SduI GDGCHC 1 cut(s) 544
SfcI CTRYAG 1 cut(s) 181
SfoI GGCGCC 1 cut(s) 463
Sfr274I CTCGAG 1 cut(s) 284
SgrAI CRCCGGYG 1 cut(s) 272
SinI GGWCC 3 cut(s) 241, 518, 837
SlaI CTCGAG 1 cut(s) 284
SmlI CTYRAG 2 cut(s) 284, 1200
SmoI CTYRAG 2 cut(s) 284, 1200
SphI GCATGC 1 cut(s) 817
Sse9I AATT 3 cut(s) 130, 573, 1229
SspDI GGCGCC 1 cut(s) 461
SspMI CTAG 1 cut(s) 1285
SstI GAGCTC 1 cut(s) 544
StyD4I CCNGG 3 cut(s) 330, 464, 714
StyI CCWWGG 1 cut(s) 905
TaaI ACNGT 4 cut(s) 37, 313, 924, 1276
TaiI ACGT 2 cut(s) 557, 782
TaqI TCGA 7 cut(s) 192, 213, 237, 266, 285, 371, 692
TasI AATT 3 cut(s) 130, 573, 1229
TauI GCSGC 4 cut(s) 123, 164, 173, 200
TfiI GAWTC 8 cut(s) 4, 42, 363, 373, 534, 689, 823, 1150
Tru1I TTAA 1 cut(s) 1077
Tru9I TTAA 1 cut(s) 1077
TscAI CASTG 1 cut(s) 686
TseFI GTSAC 1 cut(s) 307
TseI GCWGC 4 cut(s) 117, 141, 672, 1166
Tsp45I GTSAC 1 cut(s) 307
TspDTI ATGAA 3 cut(s) 1039, 1188, 1257
TspGWI ACGGA 2 cut(s) 366, 1198
TspRI CASTG 1 cut(s) 686
Van91I CCANNNNNTGG 2 cut(s) 578, 1246
VpaK11BI GGWCC 3 cut(s) 241, 518, 837
XceI RCATGY 1 cut(s) 817
XhoI CTCGAG 1 cut(s) 284
XspI CTAG 1 cut(s) 1285
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.