Rh5BG045800

PAP-specific phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0007801
Physical Location & Seq
Reverse (-)
3651942 .. 3655640
3699 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG045800.1

Sequence Viewer

Length: 1011 bp
ATGATTCTCGCCCACTCCTCCCGCCATTTCTCCACCGTCCGATTCACCCTCCCCACCTCATCTTCCCCTGCGCCTCCCCGCACCGGAATCCTCACCTCTCTTCCCCGCCGCCTCTCCCATTTCAAATGCAGCTCCGCCCTCCCCTTCGCCGCCGAGACCGCCAAGCACTACAGAGAACTAGAAGCCGCCATCGCCGTCGTCGAAACCGCCTCCAACCTCTGCGTCGAGGTCCAAACGGCGTTGGCGTCGAGCGCCGGCGGGGTTCTCGAGAAGAACGACCAGACTCCGGTCACCGTCGCCGATTTCAGCGTCCAGGCACTGATCAGTTTAGAGCTGGGGAGACGATTCCCGTCGATTCCGTTGGTGGCGGAGGAGGACTCGGCGTCGGTGAGGGAGAATAATCTGGTGAAGCCGGTGGTGAGTGCGGTGGTTGATAAGGCCGGCGCCGGGGAGACGCCGTTGACGGCGGAGGATGTGTTGGAGGCGATTGATAGAGGCGGACCGGAGGCTTTTAGATTCGGAGCTCAGCCGGCGACGTATTGGTTACTGGATCCAATTGATGGCACAAGAGGATTTGTGATGGGGAACAAGGCGTTGTTTGTGGTAGGTTTGGCTCTTGTAGTTGACGGGGAGATTGTATTAGGTGTCATGGGCTGCCCGCACTGGCAGGAATCGAACAAATGTATCAATGGAGTCCAGGAAGAGAAGAGCATTCCATCTGAAACAGGGCTTCTTATGGTCTCTCATATTGGTTGTGGCACGTGGACAAGAAGTTTATCATCTGTGCTAAATGGCACGCCAAAGATTCCTTATTCTTGGACCCGTTGCTTTGTTGATGGCTGTTCTGTGGTGGCTCAGGCACGCTTTTGTATCATAGAGAGTGAACCATGGGAGGCATTGCCACCGTCAGCTTTCTTTACCTCAACAACTAATGCTGATAGTGTTGGTGAGGGTCAAGTTCTCGTTTTGAAACCTTGTTGTGGAAGGTTTGTTCTTTTCCAACTCAATTGA

Protein Analysis

336

Amino Acids

35.91

Weight (kDa)

5.34

Isoelectric Point (pI)

33.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inositol_P PF00459 67 - 231 4.7e-16 Inositol monophosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 443
AccB7I CCANNNNNTGG 1 cut(s) 560
AclWI GGATC 2 cut(s) 545, 558
AcvI CACGTG 1 cut(s) 762
AcyI GRCGYC 4 cut(s) 245, 383, 444, 455
AfiI CCNNNNNNNGG 5 cut(s) 83, 286, 447, 560, 980
AgsI TTSAA 2 cut(s) 124, 970
AhdI GACNNNNNGTC 1 cut(s) 382
AjnI CCWGG 2 cut(s) 312, 696
AloI GAACNNNNNNTCC 2 cut(s) 975, 1007
AluBI AGCT 4 cut(s) 132, 334, 524, 911
AluI AGCT 4 cut(s) 132, 334, 524, 911
Alw21I GWGCWC 1 cut(s) 526
Alw26I GTCTC 4 cut(s) 149, 334, 446, 745
AlwI GGATC 2 cut(s) 545, 558
AlwNI CAGNNNCTG 1 cut(s) 319
Ama87I CYCGRG 1 cut(s) 266
AoxI GGCC 1 cut(s) 438
ApeKI GCWGC 2 cut(s) 129, 654
AspLEI GCGC 3 cut(s) 73, 254, 446
AspS9I GGNCC 3 cut(s) 229, 500, 819
AsuC2I CCSGG 1 cut(s) 448
AsuHPI GGTGA 7 cut(s) 37, 85, 283, 400, 418, 430, 959
AvaI CYCGRG 1 cut(s) 266
AvaII GGWCC 3 cut(s) 229, 500, 819
BaeI ACNNNNGTAYC 2 cut(s) 667, 700
BamHI GGATCC 1 cut(s) 550
BanI GGYRCC 1 cut(s) 443
BanII GRGCYC 1 cut(s) 526
BbrPI CACGTG 1 cut(s) 762
Bbv12I GWGCWC 1 cut(s) 526
BbvI GCAGC 2 cut(s) 141, 641
BccI CCATC 5 cut(s) 197, 554, 574, 724, 830
BceAI ACGGC 4 cut(s) 179, 252, 442, 480
BciT130I CCWGG 2 cut(s) 314, 698
BclI TGATCA 1 cut(s) 321
BcnI CCSGG 1 cut(s) 448
BcoDI GTCTC 4 cut(s) 149, 334, 446, 745
BfaI CTAG 1 cut(s) 179
BfmI CTRYAG 1 cut(s) 169
BfoI RGCGCY 2 cut(s) 255, 447
BisI GCNGC 5 cut(s) 109, 130, 150, 186, 655
BlpI GCTNAGC 1 cut(s) 525
BlsI GCNGC 5 cut(s) 110, 131, 151, 187, 656
Bme1390I CCNGG 3 cut(s) 314, 448, 698
Bme18I GGWCC 3 cut(s) 229, 500, 819
BmeRI GACNNNNNGTC 1 cut(s) 382
BmeT110I CYCGRG 1 cut(s) 266
BmgT120I GGNCC 3 cut(s) 229, 500, 819
BmiI GGNNCC 3 cut(s) 445, 552, 821
BmrFI CCNGG 3 cut(s) 314, 448, 698
BoxI GACNNNNGTC 1 cut(s) 287
BplI GAGNNNNNCTC 2 cut(s) 362, 394
Bpu10I CCTNAGC 1 cut(s) 855
Bpu1102I GCTNAGC 1 cut(s) 525
BpuMI CCSGG 1 cut(s) 448
BsaAI YACGTR 1 cut(s) 762
BsaHI GRCGYC 4 cut(s) 245, 383, 444, 455
BsaI GGTCTC 2 cut(s) 149, 745
BsaJI CCNNGG 2 cut(s) 447, 887
BsaWI WCCGGW 3 cut(s) 83, 286, 502
BsaXI ACNNNNNCTCC 4 cut(s) 443, 461, 473, 491
Bsc4I CCNNNNNNNGG 5 cut(s) 83, 286, 447, 560, 980
Bse118I RCCGGY 4 cut(s) 254, 412, 440, 529
Bse1I ACTGG 2 cut(s) 552, 668
Bse3DI GCAATG 1 cut(s) 896
BseBI CCWGG 2 cut(s) 314, 698
BseDI CCNNGG 2 cut(s) 447, 887
BseGI GGATG 1 cut(s) 478
BseLI CCNNNNNNNGG 5 cut(s) 83, 286, 447, 560, 980
BseMI GCAATG 1 cut(s) 896
BseMII CTCAG 2 cut(s) 539, 869
BseNI ACTGG 2 cut(s) 552, 668
BseRI GAGGAG 2 cut(s) 7, 386
BseXI GCAGC 2 cut(s) 141, 641
BseYI CCCAGC 1 cut(s) 334
BshFI GGCC 1 cut(s) 440
BshNI GGYRCC 1 cut(s) 443
BsiHKAI GWGCWC 1 cut(s) 526
BsiHKCI CYCGRG 1 cut(s) 266
BsiSI CCGG 8 cut(s) 84, 255, 287, 413, 441, 447, 503, 530
BslI CCNNNNNNNGG 5 cut(s) 83, 286, 447, 560, 980
BsmAI GTCTC 4 cut(s) 149, 334, 446, 745
BsmBI CGTCTC 2 cut(s) 334, 446
BsmI GAATGC 1 cut(s) 711
BsnI GGCC 1 cut(s) 440
Bso31I GGTCTC 2 cut(s) 149, 745
BsoBI CYCGRG 1 cut(s) 266
Bsp1286I GDGCHC 1 cut(s) 526
Bsp143I GATC 2 cut(s) 321, 550
Bsp1720I GCTNAGC 1 cut(s) 525
Bsp19I CCATGG 1 cut(s) 887
BspANI GGCC 1 cut(s) 440
BspCNI CTCAG 2 cut(s) 538, 868
BspLI GGNNCC 3 cut(s) 445, 552, 821
BspPI GGATC 2 cut(s) 545, 558
BspQI GCTCTTC 1 cut(s) 701
BspT107I GGYRCC 1 cut(s) 443
BspTNI GGTCTC 2 cut(s) 149, 745
BsrDI GCAATG 1 cut(s) 896
BsrFI RCCGGY 4 cut(s) 254, 412, 440, 529
BsrI ACTGG 2 cut(s) 552, 668
BssAI RCCGGY 4 cut(s) 254, 412, 440, 529
BssECI CCNNGG 2 cut(s) 447, 887
BssMI GATC 2 cut(s) 321, 550
BssNI GRCGYC 4 cut(s) 245, 383, 444, 455
BssT1I CCWWGG 1 cut(s) 887
Bst2UI CCWGG 2 cut(s) 314, 698
Bst4CI ACNGT 3 cut(s) 37, 295, 906
Bst6I CTCTTC 3 cut(s) 105, 696, 701
BstACI GRCGYC 4 cut(s) 245, 383, 444, 455
BstBAI YACGTR 1 cut(s) 762
BstC8I GCNNGC 6 cut(s) 256, 442, 531, 659, 797, 862
BstDEI CTNAG 2 cut(s) 525, 855
BstDSI CCRYGG 1 cut(s) 887
BstEII GGTNACC 1 cut(s) 289
BstF5I GGATG 1 cut(s) 478
BstH2I RGCGCY 2 cut(s) 255, 447
BstHHI GCGC 3 cut(s) 73, 254, 446
BstKTI GATC 2 cut(s) 324, 553
BstMAI GTCTC 4 cut(s) 149, 334, 446, 745
BstMBI GATC 2 cut(s) 321, 550
BstMWI GCNNNNNNNGC 4 cut(s) 158, 191, 251, 530
BstNI CCWGG 2 cut(s) 314, 698
BstPAI GACNNNNGTC 1 cut(s) 287
BstPI GGTNACC 1 cut(s) 289
BstSCI CCNGG 3 cut(s) 312, 446, 696
BstSFI CTRYAG 1 cut(s) 169
BstV1I GCAGC 2 cut(s) 141, 641
BstX2I RGATCY 1 cut(s) 550
BstYI RGATCY 1 cut(s) 550
BsuRI GGCC 1 cut(s) 440
BtgI CCRYGG 1 cut(s) 887
BtgZI GCGATG 1 cut(s) 175
BtsCI GGATG 1 cut(s) 478
BtsIMutI CAGTG 2 cut(s) 317, 661
Cac8I GCNNGC 6 cut(s) 256, 442, 531, 659, 797, 862
CaiI CAGNNNCTG 1 cut(s) 319
CfoI GCGC 3 cut(s) 73, 254, 446
Cfr10I RCCGGY 4 cut(s) 254, 412, 440, 529
Cfr13I GGNCC 3 cut(s) 229, 500, 819
CpoI CGGWCCG 1 cut(s) 500
CseI GACGC 5 cut(s) 211, 234, 298, 372, 463
CspI CGGWCCG 1 cut(s) 500
CviAII CATG 2 cut(s) 649, 888
DdeI CTNAG 2 cut(s) 525, 855
DinI GGCGCC 1 cut(s) 445
DpnI GATC 2 cut(s) 323, 552
DpnII GATC 2 cut(s) 321, 550
DriI GACNNNNNGTC 1 cut(s) 382
Eam1104I CTCTTC 3 cut(s) 105, 696, 701
Eam1105I GACNNNNNGTC 1 cut(s) 382
EarI CTCTTC 3 cut(s) 105, 696, 701
EciI GGCGGA 4 cut(s) 124, 383, 482, 513
Ecl136II GAGCTC 1 cut(s) 524
Eco130I CCWWGG 1 cut(s) 887
Eco24I GRGCYC 1 cut(s) 526
Eco31I GGTCTC 2 cut(s) 149, 745
Eco47I GGWCC 3 cut(s) 229, 500, 819
Eco53kI GAGCTC 1 cut(s) 524
Eco72I CACGTG 1 cut(s) 762
Eco88I CYCGRG 1 cut(s) 266
Eco91I GGTNACC 1 cut(s) 289
EcoICRI GAGCTC 1 cut(s) 524
EcoO65I GGTNACC 1 cut(s) 289
EcoRII CCWGG 2 cut(s) 312, 696
EcoT14I CCWWGG 1 cut(s) 887
EcoT38I GRGCYC 1 cut(s) 526
EgeI GGCGCC 1 cut(s) 445
EheI GGCGCC 1 cut(s) 445
ErhI CCWWGG 1 cut(s) 887
Esp3I CGTCTC 2 cut(s) 334, 446
FaeI CATG 2 cut(s) 652, 891
FaiI YATR 5 cut(s) 650, 737, 747, 875, 889
FatI CATG 2 cut(s) 648, 887
FauI CCCGC 5 cut(s) 29, 86, 113, 251, 666
FbaI TGATCA 1 cut(s) 321
Fnu4HI GCNGC 5 cut(s) 109, 130, 150, 186, 655
FokI GGATG 1 cut(s) 485
FriOI GRGCYC 1 cut(s) 526
Fsp4HI GCNGC 5 cut(s) 109, 130, 150, 186, 655
FspBI CTAG 1 cut(s) 179
GlaI GCGC 3 cut(s) 72, 253, 445
GluI GCNGC 5 cut(s) 109, 130, 150, 186, 655
GsaI CCCAGC 1 cut(s) 338
HaeII RGCGCY 2 cut(s) 255, 447
HaeIII GGCC 1 cut(s) 440
HapII CCGG 8 cut(s) 84, 255, 287, 413, 441, 447, 503, 530
HgaI GACGC 5 cut(s) 211, 234, 298, 372, 463
HhaI GCGC 3 cut(s) 73, 254, 446
Hin1I GRCGYC 4 cut(s) 245, 383, 444, 455
Hin1II CATG 2 cut(s) 652, 891
Hin6I GCGC 3 cut(s) 71, 252, 444
HinP1I GCGC 3 cut(s) 71, 252, 444
HincII GTYRAC 2 cut(s) 462, 625
HindII GTYRAC 2 cut(s) 462, 625
HpaII CCGG 8 cut(s) 84, 255, 287, 413, 441, 447, 503, 530
HphI GGTGA 7 cut(s) 37, 85, 283, 400, 418, 430, 959
Hpy166II GTNNAC 4 cut(s) 462, 625, 765, 884
Hpy188I TCNGA 3 cut(s) 41, 521, 721
Hpy188III TCNNGA 2 cut(s) 266, 268
Hpy8I GTNNAC 4 cut(s) 462, 625, 765, 884
Hpy99I CGWCG 8 cut(s) 200, 203, 227, 250, 299, 355, 388, 538
HpyAV CCTTC 2 cut(s) 154, 978
HpyCH4III ACNGT 3 cut(s) 37, 295, 906
HpyCH4IV ACGT 2 cut(s) 536, 761
HpyCH4V TGCA 1 cut(s) 129
HpyF10VI GCNNNNNNNGC 4 cut(s) 158, 191, 251, 530
HpyF3I CTNAG 2 cut(s) 525, 855
HpySE526I ACGT 2 cut(s) 536, 761
Hsp92I GRCGYC 4 cut(s) 245, 383, 444, 455
Hsp92II CATG 2 cut(s) 652, 891
HspAI GCGC 3 cut(s) 71, 252, 444
KasI GGCGCC 1 cut(s) 443
KroI GCCGGC 3 cut(s) 254, 440, 529
KroNI GCCGGC 3 cut(s) 256, 442, 531
Ksp22I TGATCA 1 cut(s) 321
Kzo9I GATC 2 cut(s) 321, 550
LguI GCTCTTC 1 cut(s) 701
LmnI GCTCC 2 cut(s) 137, 521
Lsp1109I GCAGC 2 cut(s) 141, 641
MaeI CTAG 1 cut(s) 179
MaeII ACGT 2 cut(s) 536, 761
MaeIII GTNAC 2 cut(s) 289, 543
MalI GATC 2 cut(s) 323, 552
MboI GATC 2 cut(s) 321, 550
MboII GAAGA 5 cut(s) 54, 92, 283, 713, 718
MfeI CAATTG 2 cut(s) 555, 1006
MflI RGATCY 1 cut(s) 550
MhlI GDGCHC 1 cut(s) 526
MluCI AATT 2 cut(s) 555, 1006
Mly113I GGCGCC 1 cut(s) 444
MlyI GAGTC 3 cut(s) 277, 371, 702
MmeI TCCRAC 2 cut(s) 237, 459
MreI CGCCGGCG 1 cut(s) 254
MroNI GCCGGC 3 cut(s) 254, 440, 529
MspI CCGG 8 cut(s) 84, 255, 287, 413, 441, 447, 503, 530
MspR9I CCNGG 3 cut(s) 314, 448, 698
MunI CAATTG 2 cut(s) 555, 1006
Mva1269I GAATGC 1 cut(s) 711
MvaI CCWGG 2 cut(s) 314, 698
MwoI GCNNNNNNNGC 4 cut(s) 158, 191, 251, 530
NaeI GCCGGC 3 cut(s) 256, 442, 531
NarI GGCGCC 1 cut(s) 444
NciI CCSGG 1 cut(s) 448
NcoI CCATGG 1 cut(s) 887
NdeII GATC 2 cut(s) 321, 550
NgoMIV GCCGGC 3 cut(s) 254, 440, 529
NlaIII CATG 2 cut(s) 652, 891
NlaIV GGNNCC 3 cut(s) 445, 552, 821
NmeAIII GCCGAG 2 cut(s) 178, 359
NmuCI GTSAC 1 cut(s) 289
PaeR7I CTCGAG 1 cut(s) 266
PciSI GCTCTTC 1 cut(s) 701
PcsI WCGNNNNNNNCGW 3 cut(s) 198, 242, 273
PctI GAATGC 1 cut(s) 711
PdiI GCCGGC 3 cut(s) 256, 442, 531
PfeI GAWTC 8 cut(s) 4, 42, 87, 345, 355, 516, 671, 805
PflMI CCANNNNNTGG 1 cut(s) 560
PfoI TCCNGGA 1 cut(s) 696
PkrI GCNGC 5 cut(s) 110, 131, 151, 187, 656
PleI GAGTC 3 cut(s) 277, 371, 701
PluTI GGCGCC 1 cut(s) 447
PmaCI CACGTG 1 cut(s) 762
PmlI CACGTG 1 cut(s) 762
PpsI GAGTC 3 cut(s) 277, 371, 701
Ppu21I YACGTR 1 cut(s) 762
PshAI GACNNNNGTC 1 cut(s) 287
Psp124BI GAGCTC 1 cut(s) 526
Psp6I CCWGG 2 cut(s) 312, 696
PspCI CACGTG 1 cut(s) 762
PspEI GGTNACC 1 cut(s) 289
PspFI CCCAGC 1 cut(s) 334
PspGI CCWGG 2 cut(s) 312, 696
PspN4I GGNNCC 3 cut(s) 445, 552, 821
PspPI GGNCC 3 cut(s) 229, 500, 819
PstNI CAGNNNCTG 1 cut(s) 319
PsuI RGATCY 1 cut(s) 550
Rsr2I CGGWCCG 1 cut(s) 500
RsrII CGGWCCG 1 cut(s) 500
SacI GAGCTC 1 cut(s) 526
SapI GCTCTTC 1 cut(s) 701
SatI GCNGC 5 cut(s) 109, 130, 150, 186, 655
Sau3AI GATC 2 cut(s) 321, 550
Sau96I GGNCC 3 cut(s) 229, 500, 819
SchI GAGTC 3 cut(s) 277, 371, 702
ScrFI CCNGG 3 cut(s) 314, 448, 698
SduI GDGCHC 1 cut(s) 526
SfcI CTRYAG 1 cut(s) 169
SfoI GGCGCC 1 cut(s) 445
Sfr274I CTCGAG 1 cut(s) 266
SgrAI CRCCGGYG 1 cut(s) 254
SinI GGWCC 3 cut(s) 229, 500, 819
SlaI CTCGAG 1 cut(s) 266
SmlI CTYRAG 1 cut(s) 266
SmoI CTYRAG 1 cut(s) 266
Sse9I AATT 2 cut(s) 555, 1006
SspDI GGCGCC 1 cut(s) 443
SspMI CTAG 1 cut(s) 179
SstI GAGCTC 1 cut(s) 526
StyD4I CCNGG 3 cut(s) 312, 446, 696
StyI CCWWGG 1 cut(s) 887
TaaI ACNGT 3 cut(s) 37, 295, 906
TaiI ACGT 2 cut(s) 539, 764
TaqI TCGA 6 cut(s) 201, 225, 248, 267, 353, 674
TasI AATT 2 cut(s) 555, 1006
TauI GCSGC 3 cut(s) 111, 152, 188
TfiI GAWTC 8 cut(s) 4, 42, 87, 345, 355, 516, 671, 805
TscAI CASTG 2 cut(s) 324, 668
TseFI GTSAC 1 cut(s) 289
TseI GCWGC 2 cut(s) 129, 654
Tsp45I GTSAC 1 cut(s) 289
TspGWI ACGGA 1 cut(s) 348
TspRI CASTG 2 cut(s) 324, 668
Van91I CCANNNNNTGG 1 cut(s) 560
VpaK11BI GGWCC 3 cut(s) 229, 500, 819
XhoI CTCGAG 1 cut(s) 266
XspI CTAG 1 cut(s) 179
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.