Prupe.4G035200_v2.0.a1

PAP-specific phosphatase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
1672073 .. 1675943
3871 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G035200.1

Sequence Viewer

Length: 1236 bp
ATGATTCTCGTCCACTCAGCCCGGCATTTCTCGACCGTCCGATTCAGTCAGCCCGATCCGGCGGTCCGCAGGCTACGCTTCAGCGTGAGGTCGAGTTTGCCGTTCGGCACTGAGAAGGCCAAGTACCATCGGGAGCTGGAAGCAGCCGTCGACGCCGTAGAGAGAGCTTGCGCGCTCTGCGTCGAAGTCCAATCGTCTTTGCTATCGAGTAAACGACGGGTTGTTGAAAAAAATGACCAGACTCCGGTCACGGTGGCGGATTTTGGTGTCCAGGCCCTCTTGAGTTTGGAGCTTGGTAAACGCTTCCCTTCCATTCCCTTGGTGGCGGAAGAAGACTCTGCGTTTGTACGTTCAAATAATCTAGTAGGGCCAGTTTTCGATGCGGTTATTAGCAAGACCAGCCATGGAGAAAACCCATGGACGCCTGATCATGTATTGGAAGCCATTGACAGAGGGGGCCAGGATGGTTCTACTTTCGGAGCTCAGCCGGCCACGTATTGGGTACTGGACCCAATTGATGGCACCCAAGGATTTGTGAAAGGAAATCAGGCGTTGTATGTGGTAGGTTTGGCTCTTGTAGTTGACGGACAGATTGTATTAGCTGTCATGGGCTGCCCGAACTGGCAGAATGCCGTATCCAACAAATCCACCTCTGAAGTCCAGGAAGAAAAAAACACTCCACCTGGATCAGGGATTATTATGGTTGCTCATACTGGGTGTGGCACATGGACAAAACGCCTGTCATCTGTGCTAAATCTCACAGCCAAAATGCCTTATTCTTGGATGCAATGCTTCGTTGATGGATGTTGCGTGGTGGAAGAGGCACGCTATTCTATCAGAGCGAGTGATGCATGGGAGTCATATCCGCTGTCAACTTTGTTCACCTCAACAACTAGTGCTGATAGCATTGATGAGGGTCAAATTCTTCTTGTGAAATCTTGTTGTGGAAGTTTATCCAAGTATATAATGGTGGCTTCAGGCAGGGTATCTCTTTATATGCAGAATGTGAAAGTTCAAAAAGTTACCAAGGCTTGGGATCACGCTGCTGGTATTATATGCGTGCATGAAGCAGGGGGAAAGGTGACTGACTGGAAGGGAGATCAAATTAATCTTGCAGCAGATCAACTTGGACGGAGGAATATATACCCTTCTGGTGGTATCCTTGTGACAAATGGCAACTTGCATAACCGGCTTGTAGAGATGATATCTTCCAATTCGTCCACTGTTTCACGGTGA

Protein Analysis

412

Amino Acids

44.63

Weight (kDa)

6.75

Isoelectric Point (pI)

34.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 521
AccB7I CCANNNNNTGG 3 cut(s) 498, 518, 1032
AccI GTMKAC 1 cut(s) 150
AccII CGCG 1 cut(s) 173
AciI CCGC 6 cut(s) 62, 67, 257, 326, 383, 866
AclWI GGATC 3 cut(s) 50, 694, 1044
AcoI YGGCCR 1 cut(s) 489
AcsI RAATTY 1 cut(s) 921
AcuI CTGAAG 3 cut(s) 64, 675, 960
AcyI GRCGYC 2 cut(s) 153, 422
AfaI GTAC 3 cut(s) 125, 348, 504
AfiI CCNNNNNNNGG 6 cut(s) 244, 498, 518, 689, 1032, 1154
AgsI TTSAA 3 cut(s) 227, 354, 1016
AhlI ACTAGT 1 cut(s) 893
AjnI CCWGG 4 cut(s) 270, 459, 660, 682
AluBI AGCT 5 cut(s) 136, 167, 292, 482, 602
AluI AGCT 5 cut(s) 136, 167, 292, 482, 602
Alw21I GWGCWC 1 cut(s) 484
AlwI GGATC 3 cut(s) 50, 694, 1044
AoxI GGCC 5 cut(s) 117, 273, 368, 457, 489
ApeKI GCWGC 4 cut(s) 143, 612, 1043, 1115
ApoI RAATTY 1 cut(s) 921
ArsI GACNNNNNNTTYG 4 cut(s) 326, 358, 725, 757
AseI ATTAAT 1 cut(s) 1107
AspLEI GCGC 2 cut(s) 173, 175
AspS9I GGNCC 5 cut(s) 64, 274, 368, 457, 508
AsuC2I CCSGG 1 cut(s) 22
AsuHPI GGTGA 2 cut(s) 874, 1093
AvaII GGWCC 2 cut(s) 64, 508
BanI GGYRCC 1 cut(s) 521
BanII GRGCYC 1 cut(s) 484
BarI GAAGNNNNNNTAC 2 cut(s) 107, 139
BbsI GAAGAC 1 cut(s) 339
Bbv12I GWGCWC 1 cut(s) 484
BbvI GCAGC 4 cut(s) 155, 599, 1030, 1127
BccI CCATC 4 cut(s) 135, 458, 512, 794
BceAI ACGGC 4 cut(s) 85, 131, 140, 617
BciT130I CCWGG 4 cut(s) 272, 461, 662, 684
BciVI GTATCC 2 cut(s) 646, 1169
BclI TGATCA 1 cut(s) 427
BcnI CCSGG 1 cut(s) 22
BcuI ACTAGT 1 cut(s) 893
BfaI CTAG 2 cut(s) 362, 894
BfuI GTATCC 2 cut(s) 646, 1169
BisI GCNGC 4 cut(s) 144, 613, 1044, 1116
BlpI GCTNAGC 1 cut(s) 483
BlsI GCNGC 4 cut(s) 145, 614, 1045, 1117
Bme1390I CCNGG 5 cut(s) 22, 272, 461, 662, 684
Bme18I GGWCC 2 cut(s) 64, 508
BmgT120I GGNCC 5 cut(s) 64, 274, 368, 457, 508
BmiI GGNNCC 3 cut(s) 458, 510, 523
BmrFI CCNGG 5 cut(s) 22, 272, 461, 662, 684
BmrI ACTGGG 1 cut(s) 723
BmsI GCATC 3 cut(s) 370, 774, 838
BmuI ACTGGG 1 cut(s) 723
BoxI GACNNNNGTC 1 cut(s) 245
BpiI GAAGAC 1 cut(s) 339
Bpu1102I GCTNAGC 1 cut(s) 483
BpuEI CTTGAG 1 cut(s) 301
BpuMI CCSGG 1 cut(s) 22
BsaAI YACGTR 1 cut(s) 495
BsaHI GRCGYC 2 cut(s) 153, 422
BsaJI CCNNGG 5 cut(s) 318, 403, 416, 526, 1026
BsaWI WCCGGW 1 cut(s) 244
Bsc4I CCNNNNNNNGG 6 cut(s) 244, 498, 518, 689, 1032, 1154
Bse118I RCCGGY 2 cut(s) 487, 1188
Bse1I ACTGG 5 cut(s) 371, 510, 626, 718, 1094
Bse3DI GCAATG 1 cut(s) 794
BseBI CCWGG 4 cut(s) 272, 461, 662, 684
BseDI CCNNGG 5 cut(s) 318, 403, 416, 526, 1026
BseGI GGATG 3 cut(s) 469, 789, 809
BseLI CCNNNNNNNGG 6 cut(s) 244, 498, 518, 689, 1032, 1154
BseMI GCAATG 1 cut(s) 794
BseMII CTCAG 3 cut(s) 30, 102, 497
BseNI ACTGG 5 cut(s) 371, 510, 626, 718, 1094
BsePI GCGCGC 1 cut(s) 171
BseXI GCAGC 4 cut(s) 155, 599, 1030, 1127
Bsh1236I CGCG 1 cut(s) 173
Bsh1285I CGRYCG 1 cut(s) 36
BshFI GGCC 5 cut(s) 119, 275, 370, 459, 491
BshNI GGYRCC 1 cut(s) 521
BsiEI CGRYCG 1 cut(s) 36
BsiHKAI GWGCWC 1 cut(s) 484
BsiSI CCGG 5 cut(s) 22, 59, 245, 488, 1189
BslI CCNNNNNNNGG 6 cut(s) 244, 498, 518, 689, 1032, 1154
BsmI GAATGC 1 cut(s) 634
BsnI GGCC 5 cut(s) 119, 275, 370, 459, 491
Bsp1286I GDGCHC 1 cut(s) 484
Bsp143I GATC 6 cut(s) 55, 427, 686, 1036, 1099, 1120
Bsp1720I GCTNAGC 1 cut(s) 483
Bsp19I CCATGG 2 cut(s) 403, 416
BspACI CCGC 6 cut(s) 62, 67, 257, 326, 383, 866
BspANI GGCC 5 cut(s) 119, 275, 370, 459, 491
BspCNI CTCAG 3 cut(s) 29, 103, 496
BspFNI CGCG 1 cut(s) 173
BspLI GGNNCC 3 cut(s) 458, 510, 523
BspPI GGATC 3 cut(s) 50, 694, 1044
BspT107I GGYRCC 1 cut(s) 521
BsrDI GCAATG 1 cut(s) 794
BsrFI RCCGGY 2 cut(s) 487, 1188
BsrI ACTGG 5 cut(s) 371, 510, 626, 718, 1094
BssAI RCCGGY 2 cut(s) 487, 1188
BssECI CCNNGG 5 cut(s) 318, 403, 416, 526, 1026
BssHII GCGCGC 1 cut(s) 171
BssMI GATC 6 cut(s) 55, 427, 686, 1036, 1099, 1120
BssNI GRCGYC 2 cut(s) 153, 422
BssT1I CCWWGG 5 cut(s) 318, 403, 416, 526, 1026
Bst2UI CCWGG 4 cut(s) 272, 461, 662, 684
Bst4CI ACNGT 4 cut(s) 37, 253, 1225, 1233
Bst6I CTCTTC 1 cut(s) 813
BstACI GRCGYC 2 cut(s) 153, 422
BstBAI YACGTR 1 cut(s) 495
BstC8I GCNNGC 6 cut(s) 71, 169, 173, 489, 826, 1061
BstDEI CTNAG 3 cut(s) 16, 111, 483
BstDSI CCRYGG 2 cut(s) 403, 416
BstENI CCTNNNNNAGG 1 cut(s) 687
BstF5I GGATG 3 cut(s) 469, 789, 809
BstFNI CGCG 1 cut(s) 173
BstHHI GCGC 2 cut(s) 173, 175
BstKTI GATC 6 cut(s) 58, 430, 689, 1039, 1102, 1123
BstMBI GATC 6 cut(s) 55, 427, 686, 1036, 1099, 1120
BstMCI CGRYCG 1 cut(s) 36
BstMWI GCNNNNNNNGC 7 cut(s) 75, 152, 177, 399, 488, 848, 1189
BstNI CCWGG 4 cut(s) 272, 461, 662, 684
BstPAI GACNNNNGTC 1 cut(s) 245
BstSCI CCNGG 5 cut(s) 20, 270, 459, 660, 682
BstUI CGCG 1 cut(s) 173
BstV1I GCAGC 4 cut(s) 155, 599, 1030, 1127
BstV2I GAAGAC 1 cut(s) 339
BstXI CCANNNNNNTGG 1 cut(s) 319
BsuI GTATCC 2 cut(s) 646, 1169
BsuRI GGCC 5 cut(s) 119, 275, 370, 459, 491
BtgI CCRYGG 2 cut(s) 403, 416
BtsCI GGATG 3 cut(s) 469, 789, 809
BtsIMutI CAGTG 2 cut(s) 108, 1221
Cac8I GCNNGC 6 cut(s) 71, 169, 173, 489, 826, 1061
CfoI GCGC 2 cut(s) 173, 175
Cfr10I RCCGGY 2 cut(s) 487, 1188
Cfr13I GGNCC 5 cut(s) 64, 274, 368, 457, 508
CpoI CGGWCCG 1 cut(s) 64
CseI GACGC 3 cut(s) 161, 169, 430
Csp6I GTAC 3 cut(s) 124, 347, 503
CspI CGGWCCG 1 cut(s) 64
CviAII CATG 7 cut(s) 404, 417, 431, 607, 726, 852, 1064
CviQI GTAC 3 cut(s) 124, 347, 503
DdeI CTNAG 3 cut(s) 16, 111, 483
DpnI GATC 6 cut(s) 57, 429, 688, 1038, 1101, 1122
DpnII GATC 6 cut(s) 55, 427, 686, 1036, 1099, 1120
EaeI YGGCCR 1 cut(s) 489
Eam1104I CTCTTC 1 cut(s) 813
EarI CTCTTC 1 cut(s) 813
EciI GGCGGA 2 cut(s) 272, 341
Ecl136II GAGCTC 1 cut(s) 482
Eco130I CCWWGG 5 cut(s) 318, 403, 416, 526, 1026
Eco24I GRGCYC 1 cut(s) 484
Eco32I GATATC 1 cut(s) 1206
Eco47I GGWCC 2 cut(s) 64, 508
Eco53kI GAGCTC 1 cut(s) 482
Eco57I CTGAAG 3 cut(s) 64, 675, 960
EcoICRI GAGCTC 1 cut(s) 482
EcoNI CCTNNNNNAGG 1 cut(s) 687
EcoO109I RGGNCCY 1 cut(s) 274
EcoRII CCWGG 4 cut(s) 270, 459, 660, 682
EcoRV GATATC 1 cut(s) 1206
EcoT14I CCWWGG 5 cut(s) 318, 403, 416, 526, 1026
EcoT22I ATGCAT 1 cut(s) 853
EcoT38I GRGCYC 1 cut(s) 484
ErhI CCWWGG 5 cut(s) 318, 403, 416, 526, 1026
FaeI CATG 7 cut(s) 407, 420, 434, 610, 729, 855, 1067
FatI CATG 7 cut(s) 403, 416, 430, 606, 725, 851, 1063
FbaI TGATCA 1 cut(s) 427
FblI GTMKAC 1 cut(s) 150
Fnu4HI GCNGC 4 cut(s) 144, 613, 1044, 1116
FokI GGATG 3 cut(s) 476, 796, 816
FriOI GRGCYC 1 cut(s) 484
Fsp4HI GCNGC 4 cut(s) 144, 613, 1044, 1116
FspBI CTAG 2 cut(s) 362, 894
GlaI GCGC 2 cut(s) 172, 174
GluI GCNGC 4 cut(s) 144, 613, 1044, 1116
HaeIII GGCC 5 cut(s) 119, 275, 370, 459, 491
HapII CCGG 5 cut(s) 22, 59, 245, 488, 1189
HgaI GACGC 3 cut(s) 161, 169, 430
HhaI GCGC 2 cut(s) 173, 175
Hin1I GRCGYC 2 cut(s) 153, 422
Hin1II CATG 7 cut(s) 407, 420, 434, 610, 729, 855, 1067
Hin6I GCGC 2 cut(s) 171, 173
HinP1I GCGC 2 cut(s) 171, 173
HincII GTYRAC 3 cut(s) 151, 583, 873
HindII GTYRAC 3 cut(s) 151, 583, 873
HinfI GANTC 5 cut(s) 4, 42, 241, 335, 857
HpaII CCGG 5 cut(s) 22, 59, 245, 488, 1189
HphI GGTGA 2 cut(s) 874, 1093
Hpy166II GTNNAC 8 cut(s) 13, 151, 212, 299, 583, 873, 882, 1221
Hpy188I TCNGA 4 cut(s) 41, 479, 655, 839
Hpy188III TCNNGA 3 cut(s) 31, 131, 280
Hpy8I GTNNAC 8 cut(s) 13, 151, 212, 299, 583, 873, 882, 1221
Hpy99I CGWCG 4 cut(s) 152, 155, 185, 219
HpyAV CCTTC 4 cut(s) 109, 318, 1087, 1158
HpyCH4III ACNGT 4 cut(s) 37, 253, 1225, 1233
HpyCH4IV ACGT 2 cut(s) 349, 494
HpyCH4V TGCA 6 cut(s) 787, 851, 1000, 1063, 1115, 1183
HpyF10VI GCNNNNNNNGC 7 cut(s) 75, 152, 177, 399, 488, 848, 1189
HpyF3I CTNAG 3 cut(s) 16, 111, 483
HpySE526I ACGT 2 cut(s) 349, 494
Hsp92I GRCGYC 2 cut(s) 153, 422
Hsp92II CATG 7 cut(s) 407, 420, 434, 610, 729, 855, 1067
HspAI GCGC 2 cut(s) 171, 173
KroI GCCGGC 1 cut(s) 487
KroNI GCCGGC 1 cut(s) 489
Ksp22I TGATCA 1 cut(s) 427
Kzo9I GATC 6 cut(s) 55, 427, 686, 1036, 1099, 1120
LmnI GCTCC 3 cut(s) 133, 289, 479
Lsp1109I GCAGC 4 cut(s) 155, 599, 1030, 1127
LweI GCATC 3 cut(s) 370, 774, 838
MaeI CTAG 2 cut(s) 362, 894
MaeII ACGT 2 cut(s) 349, 494
MaeIII GTNAC 4 cut(s) 247, 1021, 1081, 1165
MalI GATC 6 cut(s) 57, 429, 688, 1038, 1101, 1122
MboI GATC 6 cut(s) 55, 427, 686, 1036, 1099, 1120
MboII GAAGA 6 cut(s) 341, 344, 677, 830, 917, 1200
MfeI CAATTG 1 cut(s) 513
MhlI GDGCHC 1 cut(s) 484
MluCI AATT 4 cut(s) 513, 921, 1104, 1213
MlyI GAGTC 3 cut(s) 235, 329, 866
MmeI TCCRAC 1 cut(s) 663
MnlI CCTC 8 cut(s) 81, 287, 446, 661, 814, 895, 907, 1128
Mph1103I ATGCAT 1 cut(s) 853
MroNI GCCGGC 1 cut(s) 487
MseI TTAA 1 cut(s) 1107
MspA1I CMGCKG 1 cut(s) 868
MspI CCGG 5 cut(s) 22, 59, 245, 488, 1189
MspR9I CCNGG 5 cut(s) 22, 272, 461, 662, 684
MunI CAATTG 1 cut(s) 513
Mva1269I GAATGC 1 cut(s) 634
MvaI CCWGG 4 cut(s) 272, 461, 662, 684
MvnI CGCG 1 cut(s) 173
MwoI GCNNNNNNNGC 7 cut(s) 75, 152, 177, 399, 488, 848, 1189
NaeI GCCGGC 1 cut(s) 489
NciI CCSGG 1 cut(s) 22
NcoI CCATGG 2 cut(s) 403, 416
NdeII GATC 6 cut(s) 55, 427, 686, 1036, 1099, 1120
NgoMIV GCCGGC 1 cut(s) 487
NlaIII CATG 7 cut(s) 407, 420, 434, 610, 729, 855, 1067
NlaIV GGNNCC 3 cut(s) 458, 510, 523
NmuCI GTSAC 3 cut(s) 247, 1081, 1165
NsiI ATGCAT 1 cut(s) 853
PauI GCGCGC 1 cut(s) 171
PcsI WCGNNNNNNNCGW 1 cut(s) 98
PctI GAATGC 1 cut(s) 634
PdiI GCCGGC 1 cut(s) 489
PfeI GAWTC 2 cut(s) 4, 42
PflMI CCANNNNNTGG 3 cut(s) 498, 518, 1032
PfoI TCCNGGA 1 cut(s) 660
PkrI GCNGC 4 cut(s) 145, 614, 1045, 1117
PleI GAGTC 3 cut(s) 235, 329, 865
PpsI GAGTC 3 cut(s) 235, 329, 865
Ppu21I YACGTR 1 cut(s) 495
PshAI GACNNNNGTC 1 cut(s) 245
PshBI ATTAAT 1 cut(s) 1107
Psp124BI GAGCTC 1 cut(s) 484
Psp6I CCWGG 4 cut(s) 270, 459, 660, 682
PspGI CCWGG 4 cut(s) 270, 459, 660, 682
PspN4I GGNNCC 3 cut(s) 458, 510, 523
PspPI GGNCC 5 cut(s) 64, 274, 368, 457, 508
PteI GCGCGC 1 cut(s) 171
RsaI GTAC 3 cut(s) 125, 348, 504
RsaNI GTAC 3 cut(s) 124, 347, 503
Rsr2I CGGWCCG 1 cut(s) 64
RsrII CGGWCCG 1 cut(s) 64
SacI GAGCTC 1 cut(s) 484
SalI GTCGAC 1 cut(s) 149
SaqAI TTAA 1 cut(s) 1107
SatI GCNGC 4 cut(s) 144, 613, 1044, 1116
Sau3AI GATC 6 cut(s) 55, 427, 686, 1036, 1099, 1120
Sau96I GGNCC 5 cut(s) 64, 274, 368, 457, 508
SchI GAGTC 3 cut(s) 235, 329, 866
ScrFI CCNGG 5 cut(s) 22, 272, 461, 662, 684
SduI GDGCHC 1 cut(s) 484
SfaNI GCATC 3 cut(s) 370, 774, 838
SgrDI CGTCGACG 1 cut(s) 149
SinI GGWCC 2 cut(s) 64, 508
SmlI CTYRAG 1 cut(s) 280
SmoI CTYRAG 1 cut(s) 280
SpeI ACTAGT 1 cut(s) 893
Sse9I AATT 4 cut(s) 513, 921, 1104, 1213
SsiI CCGC 6 cut(s) 62, 67, 257, 326, 383, 866
SspMI CTAG 2 cut(s) 362, 894
SstI GAGCTC 1 cut(s) 484
StyD4I CCNGG 5 cut(s) 20, 270, 459, 660, 682
StyI CCWWGG 5 cut(s) 318, 403, 416, 526, 1026
TaaI ACNGT 4 cut(s) 37, 253, 1225, 1233
TaiI ACGT 2 cut(s) 352, 497
TaqI TCGA 6 cut(s) 32, 92, 150, 183, 206, 378
TasI AATT 4 cut(s) 513, 921, 1104, 1213
TfiI GAWTC 2 cut(s) 4, 42
Tru1I TTAA 1 cut(s) 1107
Tru9I TTAA 1 cut(s) 1107
TscAI CASTG 2 cut(s) 115, 1228
TseFI GTSAC 3 cut(s) 247, 1081, 1165
TseI GCWGC 4 cut(s) 143, 612, 1043, 1115
Tsp45I GTSAC 3 cut(s) 247, 1081, 1165
TspDTI ATGAA 1 cut(s) 1080
TspGWI ACGGA 2 cut(s) 600, 1147
TspRI CASTG 2 cut(s) 115, 1228
Van91I CCANNNNNTGG 3 cut(s) 498, 518, 1032
VpaK11BI GGWCC 2 cut(s) 64, 508
VspI ATTAAT 1 cut(s) 1107
XagI CCTNNNNNAGG 1 cut(s) 687
XapI RAATTY 1 cut(s) 921
XcmI CCANNNNNNNNNTGG 2 cut(s) 319, 964
XmiI GTMKAC 1 cut(s) 150
XspI CTAG 2 cut(s) 362, 894
Zsp2I ATGCAT 1 cut(s) 853
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.