AT4G11380

Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi trans-Golgi network (TGN) and or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0006717
Physical Location & Seq
Forward (+)
6919817 .. 6925969
6153 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G11380.2

Sequence Viewer

Length: 2685 bp
ATGAGTGGTCACGATTCGAAATACTTCTCCACGACGAAGAAGGGAGAGATCCCTGAGCTCAAGGAAGAGCTTAATTCCCAGTATAAGGATAAGAGAAAAGATGCAGTTAAGAAGGTTATTGCGGCGATGACTGTTGGAAAGGATGTTTCATCACTTTTCACTGATGTAGTCAATTGTATGCAAACGGAAAATTTGGAGTTGAAGAAGCTTGTTTACTTGTATCTCATAAATTATGCGAAAAGCCAGCCAGATCTTGCTATTCTTGCAGTAAATACCTTTGTAAAGGATTCACAGGATCCAAATCCGCTGATTCGTGCTTTGGCTGTGCGGACAATGGGCTGCATTCGTGTTGATAAAATCACAGAATATCTATGTGATCCTCTTCAAAAGTGCCTAAAGGATGATGACCCATATGTCAGGAAGACTGCGGCTATTTGCGTCGCTAAGCTTTTCGACATAAATGCTGAATTAGTTGAGGACAGAGGTTTCCTTGAAGCCTTGAAGGATTTGATATCAGATAACAATCCAATGGTTGTTGCCAATGCTGTAGCAGCCCTTGCGGAGATTCAAGAGAACAGTAGTAGCCCCATCTTTGAGATCAATAGTACCACTCTTACAAAGCTCCTTACTGCTCTAAATGAATGCACTGAGTGGGGTCAAGTTTTTATACTAGATGCTTTATCGAAGTATAAAGCAGCTGATCCCCGTGAGGCTGAAAATATTGTTGAGAGAGTAACACCAAGGTTGCAACATGCCAACTGCGCTGTTGTTCTTTCAGCTGTTAAGATGATCCTTCAACAAATGGAACTTATTACTAGTACAGACGTGATTAGAAATCTTTGTAAGAAGATGGCTCCACCCCTTGTTACATTGCTTTCTGCCGAACCTGAGATACAATATGTTGCACTTCGTAACATTAATCTTATTGTGCAAAAACGACCCACTATCCTTGCCCATGAAATTAAGGTTTTCTTCTGCAAGTATAACGACCCAATTTATGTTAAGATGGAGAAGTTGGAGATTATGATTAAACTTGCCTCTGACAGAAACATAGACCAGGTTCTTCTGGAATTCAAAGAGTATGCCACAGAAGTAGACGTTGATTTTGTTAGAAAGGCTGTTCGTGCGATAGGCCGATGTGCTATCAAACTAGAGAGAGCAGCTGAACGGTGCATCAGTGTTTTGCTCGAGTTGATCAAGATTAAAGTGAATTATGTTGTCCAGGAGGCCATTATTGTCATCAAAGATATCTTCAGAAGATATCCAAACACGTATGAGTCCATAATTGCAACACTCTGTGAGAGTTTAGACACTTTGGATGAACCAGAAGCTAAGGCATCTATGATATGGATCATTGGTGAATATGCTGAAAGAATTGACAATGCCGATGAGCTTCTTGAAAGCTTTCTGGAGAATTTTCCTGAGGAACCAGCACAGGTCCAGTTGCAGCTCCTAACTGCTACTGTTAAGCTATTCCTGAAGAAGCCAACTGAAGGCCCTCAACAAATGATTCAGGTTGTCTTGAATAATGCTACTGTGGAGACGGATAATCCTGATCTCAGAGATCGTGCATACATATACTGGCGTCTTCTATCCACTGATCCTGAGGCTGCCAAGGATGTTGTCTTAGCTGAAAAGCCCGTGATTTCTGACGACTCAAACCAGCTAGACCCATCACTTCTTGATGAGCTTCTTACAAATATTTCGACCTTGTCCTCTGTGTACCACAAACCCCCAGAGGCTTTTGTTACCCGCTTGAAAACGACAGTTCAGAAAACAGAAGACGAGGACTTTGCGGAAGGAAGCGAAGCAGGATACTCATCTAGTAATCCGGTTGATAGTGCAGCTTCTCCTCCAGGTAATATCCCACAGCCTTCCGGAAGACAACCAGCACCAGCGGTCCCAGCTCCTGTACCTGATCTGCTAGGTGACCTGATGGGATTGGATAATGCCGCTATTGTCCCGGTTGATGATCCCATAACTCAATCTGGTCCTCCTCTGCCCGTTGTCGTCCCAGCTTCAAGTGGTCAAGGTCTGCAGATAAGCGCTCAATTATCCCGAAAAGATGGACAAGTATTTTACAGTATGCTCTTCGAGAACAACTCGCAGTCGGTTCTTGATGGTTTCATGATTCAGTTCAACAAAAACACATTCGGCCTTGCAGCTGCTGGATCTCTTCAGATTCCGCCTTTGCATCCCGCAACATCCGCCAGGACAATGCTACCTATGGTCTTGTTCCAAAACATGTCTGCTGGGCCTCCAAGCTCGCTCTTACAAGTCGCTGTCAAAAACAACCAGCAGCCCGTGTGGTACTTCACCGATAAGATTATACTTCATGCTCTTTTCGGTGAAGACGGTAGAATGGAACGTGGAACCTTCCTTGAGACATGGAGGTCGTTACCGGACTCAAATGAAGTCCTGAAAGAATTCCCCGGGATCACCATCACGAGCGTCGAATCAACTATCGAATTGCTCACAGCATTCAACATGTTCTTTATAGCAAAGCGCAAGAACGGGAACCAAGACGTGATCTACTTATCAGCCAAAGATCCACGAGATGTACCGTTTTTGATCGAGCTCACTGCAATGGTGGGCCAACCAGGTCTCAAATGCGCAGTGAAAACTCCCACTCCCGAGATTGCGCCTCTCTTCTTCGAAGCTTTGGAGCTTCTCTTCAAGGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0009506 GO:0016020 GO:0030054 GO:0044464 GO:0055044 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko04142 map04142
Pfam Domains
Protein Families
Adaptin_N Alpha_adaptinC2 B2-adapt-app_C

Protein Analysis

894

Amino Acids

99.37

Weight (kDa)

4.93

Isoelectric Point (pI)

39.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Adaptin_N PF01602 51 - 556 2.6e-167 Adaptin N terminal region
HEAT_2 PF13646 120 - 172 4.3e-06 HEAT repeats
Cnd1 PF12717 125 - 288 1.3e-65 non-SMC mitotic condensation complex subunit 1
Alpha_adaptinC2 PF02883 690 - 794 6e-12 Adaptin C-terminal domain
B2-adapt-app_C PF09066 806 - 913 2.9e-28 Beta2-adaptin appendage, C-terminal sub-domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 413, 2392
Acc16I TGCGCA 1 cut(s) 2614
AccI GTMKAC 1 cut(s) 1095
AccIII TCCGGA 1 cut(s) 1877
AcsI RAATTY 4 cut(s) 190, 1070, 1414, 2426
AcuI CTGAAG 4 cut(s) 1237, 1499, 1512, 2162
AcyI GRCGYC 1 cut(s) 1585
AdeI CACNNNGTG 2 cut(s) 651, 1298
AfaI GTAC 6 cut(s) 607, 820, 1724, 1914, 2312, 2562
AfeI AGCGCT 1 cut(s) 2047
AfiI CCNNNNNNNGG 2 cut(s) 85, 1493
AflIII ACRYGT 3 cut(s) 1269, 2244, 2487
AhlI ACTAGT 1 cut(s) 815
AjiI CACGTC 2 cut(s) 826, 2527
AjnI CCWGG 5 cut(s) 1056, 1221, 1855, 2210, 2599
Alw21I GWGCWC 2 cut(s) 60, 2580
Alw26I GTCTC 3 cut(s) 1535, 2378, 2609
AlwNI CAGNNNCTG 2 cut(s) 1910, 2168
Ama87I CYCGRG 3 cut(s) 1187, 2432, 2633
Aor13HI TCCGGA 1 cut(s) 1877
Aor51HI AGCGCT 1 cut(s) 2047
AoxI GGCC 6 cut(s) 1132, 1227, 1495, 2155, 2255, 2593
ApoI RAATTY 4 cut(s) 190, 1070, 1414, 2426
ArsI GACNNNNNNTTYG 4 cut(s) 1088, 1120, 1775, 1807
AseI ATTAAT 1 cut(s) 918
Asp700I GAANNNNTTC 3 cut(s) 23, 1404, 2426
AspLEI GCGC 5 cut(s) 764, 2048, 2508, 2615, 2644
AspS9I GGNCC 6 cut(s) 1438, 1496, 1900, 1991, 2255, 2593
AsuC2I CCSGG 3 cut(s) 1964, 2433, 2434
AsuHPI GGTGA 5 cut(s) 1370, 1940, 2308, 2360, 2431
AsuII TTCGAA 2 cut(s) 17, 2655
AvaI CYCGRG 3 cut(s) 1187, 2432, 2633
AvaII GGWCC 3 cut(s) 1438, 1900, 1991
AxyI CCTNAGG 2 cut(s) 1422, 1605
BamHI GGATCC 1 cut(s) 295
BanII GRGCYC 2 cut(s) 60, 2580
BarI GAAGNNNNNNTAC 2 cut(s) 197, 229
BauI CACGAG 2 cut(s) 2446, 2553
BbsI GAAGAC 5 cut(s) 428, 1580, 1788, 1888, 2358
Bbv12I GWGCWC 2 cut(s) 60, 2580
BccI CCATC 8 cut(s) 596, 844, 1000, 1681, 1930, 2060, 2114, 2450
BcgI CGANNNNNNTGC 6 cut(s) 443, 477, 1775, 1809, 2564, 2598
BciT130I CCWGG 5 cut(s) 1058, 1223, 1857, 2212, 2601
BciVI GTATCC 1 cut(s) 1808
BclI TGATCA 1 cut(s) 1194
BcnI CCSGG 3 cut(s) 1964, 2433, 2434
BcoDI GTCTC 3 cut(s) 1535, 2378, 2609
BcuI ACTAGT 1 cut(s) 815
BfaI CTAG 6 cut(s) 671, 816, 1151, 1667, 1824, 1925
BfmI CTRYAG 2 cut(s) 546, 2036
BfoI RGCGCY 1 cut(s) 2049
BfuI GTATCC 1 cut(s) 1808
BglII AGATCT 1 cut(s) 250
BlpI GCTNAGC 1 cut(s) 444
Bme1390I CCNGG 8 cut(s) 1058, 1223, 1857, 1964, 2212, 2433, 2434, 2601
Bme18I GGWCC 3 cut(s) 1438, 1900, 1991
BmeT110I CYCGRG 3 cut(s) 1187, 2432, 2633
BmgBI CACGTC 2 cut(s) 826, 2527
BmgT120I GGNCC 6 cut(s) 1438, 1496, 1900, 1991, 2255, 2593
BmiI GGNNCC 6 cut(s) 297, 855, 1428, 1902, 2374, 2519
BmrFI CCNGG 8 cut(s) 1058, 1223, 1857, 1964, 2212, 2433, 2434, 2601
BmrI ACTGGG 1 cut(s) 73
BmsI GCATC 5 cut(s) 91, 664, 1182, 1346, 2203
BmuI ACTGGG 1 cut(s) 73
BpiI GAAGAC 5 cut(s) 428, 1580, 1788, 1888, 2358
BplI GAGNNNNNCTC 2 cut(s) 2087, 2119
BpmI CTGGAG 2 cut(s) 1430, 1839
Bpu10I CCTNAGC 2 cut(s) 54, 1332
Bpu1102I GCTNAGC 1 cut(s) 444
Bpu14I TTCGAA 2 cut(s) 17, 2655
BpuEI CTTGAG 2 cut(s) 44, 2402
BpuMI CCSGG 3 cut(s) 1964, 2433, 2434
BsaAI YACGTR 1 cut(s) 1272
BsaBI GATNNNNATC 5 cut(s) 300, 522, 1349, 1819, 2441
BsaHI GRCGYC 1 cut(s) 1585
BsaI GGTCTC 1 cut(s) 2609
BsaJI CCNNGG 4 cut(s) 740, 1614, 2431, 2432
BsaWI WCCGGW 3 cut(s) 1831, 1877, 2401
BsaXI ACNNNNNCTCC 2 cut(s) 2614, 2644
Bsc4I CCNNNNNNNGG 2 cut(s) 85, 1493
Bse1I ACTGG 3 cut(s) 79, 1441, 1586
Bse21I CCTNAGG 2 cut(s) 1422, 1605
Bse3DI GCAATG 2 cut(s) 869, 2592
Bse8I GATNNNNATC 5 cut(s) 300, 522, 1349, 1819, 2441
BseAI TCCGGA 1 cut(s) 1877
BseBI CCWGG 5 cut(s) 1058, 1223, 1857, 2212, 2601
BseDI CCNNGG 4 cut(s) 740, 1614, 2431, 2432
BseGI GGATG 6 cut(s) 148, 406, 1324, 1624, 2194, 2204
BseJI GATNNNNATC 5 cut(s) 300, 522, 1349, 1819, 2441
BseLI CCNNNNNNNGG 2 cut(s) 85, 1493
BseMI GCAATG 2 cut(s) 869, 2592
BseMII CTCAG 6 cut(s) 45, 639, 879, 1413, 1573, 1596
BseNI ACTGG 3 cut(s) 79, 1441, 1586
BseRI GAGGAG 2 cut(s) 1842, 1986
BseYI CCCAGC 3 cut(s) 1903, 2014, 2252
BsgI GTGCAG 1 cut(s) 1863
BshFI GGCC 6 cut(s) 1134, 1229, 1497, 2157, 2257, 2595
BsiHKAI GWGCWC 2 cut(s) 60, 2580
BsiHKCI CYCGRG 3 cut(s) 1187, 2432, 2633
BsiSI CCGG 5 cut(s) 1832, 1878, 1964, 2402, 2433
BslFI GGGAC 3 cut(s) 1886, 1946, 1997
BslI CCNNNNNNNGG 2 cut(s) 85, 1493
BsmAI GTCTC 3 cut(s) 1535, 2378, 2609
BsmBI CGTCTC 1 cut(s) 1535
BsmFI GGGAC 3 cut(s) 1886, 1946, 1997
BsmI GAATGC 3 cut(s) 342, 647, 2480
BsnI GGCC 6 cut(s) 1134, 1229, 1497, 2157, 2257, 2595
Bso31I GGTCTC 1 cut(s) 2609
BsoBI CYCGRG 3 cut(s) 1187, 2432, 2633
Bsp119I TTCGAA 2 cut(s) 17, 2655
Bsp1286I GDGCHC 2 cut(s) 60, 2580
Bsp13I TCCGGA 1 cut(s) 1877
Bsp1720I GCTNAGC 1 cut(s) 444
BspANI GGCC 6 cut(s) 1134, 1229, 1497, 2157, 2257, 2595
BspCNI CTCAG 6 cut(s) 46, 640, 880, 1414, 1572, 1597
BspEI TCCGGA 1 cut(s) 1877
BspHI TCATGA 1 cut(s) 2127
BspLI GGNNCC 6 cut(s) 297, 855, 1428, 1902, 2374, 2519
BspMAI CTGCAG 1 cut(s) 2040
BspQI GCTCTTC 2 cut(s) 60, 2096
BspT104I TTCGAA 2 cut(s) 17, 2655
BspTNI GGTCTC 1 cut(s) 2609
BsrDI GCAATG 2 cut(s) 869, 2592
BsrI ACTGG 3 cut(s) 79, 1441, 1586
BssECI CCNNGG 4 cut(s) 740, 1614, 2431, 2432
BssNI GRCGYC 1 cut(s) 1585
BssSI CACGAG 2 cut(s) 2446, 2553
BssT1I CCWWGG 2 cut(s) 740, 1614
Bst2BI CACGAG 2 cut(s) 2446, 2553
Bst2UI CCWGG 5 cut(s) 1058, 1223, 1857, 2212, 2601
Bst4CI ACNGT 9 cut(s) 133, 578, 1170, 1465, 1537, 1768, 2084, 2357, 2565
Bst6I CTCTTC 6 cut(s) 60, 387, 2096, 2181, 2654, 2678
BstACI GRCGYC 1 cut(s) 1585
BstAPI GCANNNNNTGC 1 cut(s) 557
BstBAI YACGTR 1 cut(s) 1272
BstBI TTCGAA 2 cut(s) 17, 2655
BstC8I GCNNGC 2 cut(s) 245, 2267
BstDEI CTNAG 9 cut(s) 54, 444, 648, 888, 1332, 1422, 1559, 1605, 1627
BstEII GGTNACC 1 cut(s) 1928
BstF5I GGATG 6 cut(s) 148, 406, 1324, 1624, 2194, 2204
BstH2I RGCGCY 1 cut(s) 2049
BstHHI GCGC 5 cut(s) 764, 2048, 2508, 2615, 2644
BstMAI GTCTC 3 cut(s) 1535, 2378, 2609
BstMWI GCNNNNNNNGC 7 cut(s) 263, 551, 557, 761, 1124, 1904, 2207
BstNI CCWGG 5 cut(s) 1058, 1223, 1857, 2212, 2601
BstNSI RCATGY 3 cut(s) 755, 2248, 2491
BstPI GGTNACC 1 cut(s) 1928
BstSCI CCNGG 8 cut(s) 1056, 1221, 1855, 1962, 2210, 2431, 2432, 2599
BstSFI CTRYAG 2 cut(s) 546, 2036
BstV2I GAAGAC 5 cut(s) 428, 1580, 1788, 1888, 2358
BstX2I RGATCY 5 cut(s) 48, 250, 295, 2171, 2548
BstYI RGATCY 5 cut(s) 48, 250, 295, 2171, 2548
Bsu36I CCTNAGG 2 cut(s) 1422, 1605
BsuI GTATCC 1 cut(s) 1808
BsuRI GGCC 6 cut(s) 1134, 1229, 1497, 2157, 2257, 2595
BtgZI GCGATG 1 cut(s) 140
BtrI CACGTC 2 cut(s) 826, 2527
BtsCI GGATG 6 cut(s) 148, 406, 1324, 1624, 2194, 2204
BtsI GCAGTG 2 cut(s) 2580, 2622
BtsIMutI CAGTG 6 cut(s) 159, 645, 1183, 1596, 2580, 2622
Cac8I GCNNGC 2 cut(s) 245, 2267
CaiI CAGNNNCTG 2 cut(s) 1910, 2168
CciI TCATGA 1 cut(s) 2127
CfoI GCGC 5 cut(s) 764, 2048, 2508, 2615, 2644
Cfr13I GGNCC 6 cut(s) 1438, 1496, 1900, 1991, 2255, 2593
Cfr9I CCCGGG 1 cut(s) 2432
CseI GACGC 3 cut(s) 427, 1574, 2440
CsiI ACCWGGT 2 cut(s) 1056, 2599
Csp6I GTAC 6 cut(s) 606, 819, 1723, 1913, 2311, 2561
CspCI CAANNNNNGTGG 2 cut(s) 931, 966
CviAII CATG 7 cut(s) 752, 956, 2128, 2245, 2336, 2388, 2488
CviQI GTAC 6 cut(s) 606, 819, 1723, 1913, 2311, 2561
DdeI CTNAG 9 cut(s) 54, 444, 648, 888, 1332, 1422, 1559, 1605, 1627
DraIII CACNNNGTG 2 cut(s) 651, 1298
DrdI GACNNNNNNGTC 2 cut(s) 413, 2392
DseDI GACNNNNNNGTC 2 cut(s) 413, 2392
Eam1104I CTCTTC 6 cut(s) 60, 387, 2096, 2181, 2654, 2678
EarI CTCTTC 6 cut(s) 60, 387, 2096, 2181, 2654, 2678
EciI GGCGGA 2 cut(s) 2175, 2197
Ecl136II GAGCTC 2 cut(s) 58, 2578
Eco130I CCWWGG 2 cut(s) 740, 1614
Eco24I GRGCYC 2 cut(s) 60, 2580
Eco31I GGTCTC 1 cut(s) 2609
Eco32I GATATC 3 cut(s) 513, 1249, 1262
Eco47I GGWCC 3 cut(s) 1438, 1900, 1991
Eco47III AGCGCT 1 cut(s) 2047
Eco53kI GAGCTC 2 cut(s) 58, 2578
Eco57I CTGAAG 4 cut(s) 1237, 1499, 1512, 2162
Eco81I CCTNAGG 2 cut(s) 1422, 1605
Eco88I CYCGRG 3 cut(s) 1187, 2432, 2633
Eco91I GGTNACC 1 cut(s) 1928
EcoICRI GAGCTC 2 cut(s) 58, 2578
EcoO109I RGGNCCY 1 cut(s) 1496
EcoO65I GGTNACC 1 cut(s) 1928
EcoRI GAATTC 2 cut(s) 1070, 2426
EcoRII CCWGG 5 cut(s) 1056, 1221, 1855, 2210, 2599
EcoRV GATATC 3 cut(s) 513, 1249, 1262
EcoT14I CCWWGG 2 cut(s) 740, 1614
EcoT38I GRGCYC 2 cut(s) 60, 2580
ErhI CCWWGG 2 cut(s) 740, 1614
Esp3I CGTCTC 1 cut(s) 1535
FaeI CATG 7 cut(s) 755, 959, 2131, 2248, 2339, 2391, 2491
FalI AAGNNNNNCTT 2 cut(s) 956, 988
FaqI GGGAC 3 cut(s) 1886, 1946, 1997
FatI CATG 7 cut(s) 751, 955, 2127, 2244, 2335, 2387, 2487
FauI CCCGC 2 cut(s) 1760, 2206
FauNDI CATATG 1 cut(s) 412
FbaI TGATCA 1 cut(s) 1194
FblI GTMKAC 1 cut(s) 1095
FokI GGATG 6 cut(s) 155, 413, 1331, 1631, 2181, 2191
FriOI GRGCYC 2 cut(s) 60, 2580
FspBI CTAG 6 cut(s) 671, 816, 1151, 1667, 1824, 1925
FspI TGCGCA 1 cut(s) 2614
GlaI GCGC 5 cut(s) 763, 2047, 2507, 2614, 2643
GsaI CCCAGC 3 cut(s) 1907, 2018, 2256
GsuI CTGGAG 2 cut(s) 1430, 1839
HaeII RGCGCY 1 cut(s) 2049
HaeIII GGCC 6 cut(s) 1134, 1229, 1497, 2157, 2257, 2595
HapII CCGG 5 cut(s) 1832, 1878, 1964, 2402, 2433
HgaI GACGC 3 cut(s) 427, 1574, 2440
HhaI GCGC 5 cut(s) 764, 2048, 2508, 2615, 2644
Hin1I GRCGYC 1 cut(s) 1585
Hin1II CATG 7 cut(s) 755, 959, 2131, 2248, 2339, 2391, 2491
Hin6I GCGC 5 cut(s) 762, 2046, 2506, 2613, 2642
HinP1I GCGC 5 cut(s) 762, 2046, 2506, 2613, 2642
HindIII AAGCTT 4 cut(s) 206, 446, 1402, 2658
HpaII CCGG 5 cut(s) 1832, 1878, 1964, 2402, 2433
HphI GGTGA 5 cut(s) 1370, 1940, 2308, 2360, 2431
Hpy166II GTNNAC 3 cut(s) 214, 1096, 1723
Hpy188I TCNGA 7 cut(s) 517, 1042, 1256, 1562, 1651, 1773, 2181
Hpy8I GTNNAC 3 cut(s) 214, 1096, 1723
Hpy99I CGWCG 3 cut(s) 37, 443, 2456
HpyAV CCTTC 8 cut(s) 34, 106, 496, 803, 1487, 1793, 1884, 2386
HpyCH4III ACNGT 9 cut(s) 133, 578, 1170, 1465, 1537, 1768, 2084, 2357, 2565
HpyCH4IV ACGT 5 cut(s) 825, 1098, 1271, 2368, 2526
HpyF10VI GCNNNNNNNGC 7 cut(s) 263, 551, 557, 761, 1124, 1904, 2207
HpyF3I CTNAG 9 cut(s) 54, 444, 648, 888, 1332, 1422, 1559, 1605, 1627
HpySE526I ACGT 5 cut(s) 825, 1098, 1271, 2368, 2526
Hsp92I GRCGYC 1 cut(s) 1585
Hsp92II CATG 7 cut(s) 755, 959, 2131, 2248, 2339, 2391, 2491
HspAI GCGC 5 cut(s) 762, 2046, 2506, 2613, 2642
Kpn2I TCCGGA 1 cut(s) 1877
Ksp22I TGATCA 1 cut(s) 1194
LguI GCTCTTC 2 cut(s) 60, 2096
LmnI GCTCC 5 cut(s) 627, 859, 1455, 1912, 2665
LweI GCATC 5 cut(s) 91, 664, 1182, 1346, 2203
MabI ACCWGGT 2 cut(s) 1056, 2599
MaeI CTAG 6 cut(s) 671, 816, 1151, 1667, 1824, 1925
MaeII ACGT 5 cut(s) 825, 1098, 1271, 2368, 2526
MaeIII GTNAC 7 cut(s) 8, 733, 865, 911, 1747, 1928, 2397
MfeI CAATTG 1 cut(s) 172
MflI RGATCY 5 cut(s) 48, 250, 295, 2171, 2548
MhlI GDGCHC 2 cut(s) 60, 2580
MlyI GAGTC 3 cut(s) 1286, 1649, 2399
MmeI TCCRAC 2 cut(s) 115, 996
MroI TCCGGA 1 cut(s) 1877
MroXI GAANNNNTTC 3 cut(s) 23, 1404, 2426
MseI TTAA 9 cut(s) 72, 108, 783, 918, 963, 1002, 1029, 1203, 1467
MslI CAYNNNNRTG 1 cut(s) 2585
MspA1I CMGCKG 6 cut(s) 307, 698, 779, 1163, 1898, 2165
MspI CCGG 5 cut(s) 1832, 1878, 1964, 2402, 2433
MspR9I CCNGG 8 cut(s) 1058, 1223, 1857, 1964, 2212, 2433, 2434, 2601
MunI CAATTG 1 cut(s) 172
Mva1269I GAATGC 3 cut(s) 342, 647, 2480
MvaI CCWGG 5 cut(s) 1058, 1223, 1857, 2212, 2601
MwoI GCNNNNNNNGC 7 cut(s) 263, 551, 557, 761, 1124, 1904, 2207
NciI CCSGG 3 cut(s) 1964, 2433, 2434
NdeI CATATG 1 cut(s) 412
NlaIII CATG 7 cut(s) 755, 959, 2131, 2248, 2339, 2391, 2491
NlaIV GGNNCC 6 cut(s) 297, 855, 1428, 1902, 2374, 2519
NmuCI GTSAC 2 cut(s) 8, 1928
NsbI TGCGCA 1 cut(s) 2614
NspI RCATGY 3 cut(s) 755, 2248, 2491
NspV TTCGAA 2 cut(s) 17, 2655
PaeR7I CTCGAG 1 cut(s) 1187
PagI TCATGA 1 cut(s) 2127
PciI ACATGT 2 cut(s) 2244, 2487
PciSI GCTCTTC 2 cut(s) 60, 2096
PctI GAATGC 3 cut(s) 342, 647, 2480
PdmI GAANNNNTTC 3 cut(s) 23, 1404, 2426
PfeI GAWTC 8 cut(s) 14, 287, 310, 565, 1510, 2131, 2182, 2456
PflFI GACNNNGTC 1 cut(s) 1711
PfoI TCCNGGA 1 cut(s) 1221
PleI GAGTC 3 cut(s) 1285, 1649, 2399
PpsI GAGTC 3 cut(s) 1285, 1649, 2399
Ppu21I YACGTR 1 cut(s) 1272
PscI ACATGT 2 cut(s) 2244, 2487
PshBI ATTAAT 1 cut(s) 918
Psp124BI GAGCTC 2 cut(s) 60, 2580
Psp6I CCWGG 5 cut(s) 1056, 1221, 1855, 2210, 2599
PspEI GGTNACC 1 cut(s) 1928
PspFI CCCAGC 3 cut(s) 1903, 2014, 2252
PspGI CCWGG 5 cut(s) 1056, 1221, 1855, 2210, 2599
PspN4I GGNNCC 6 cut(s) 297, 855, 1428, 1902, 2374, 2519
PspPI GGNCC 6 cut(s) 1438, 1496, 1900, 1991, 2255, 2593
PspXI VCTCGAGB 1 cut(s) 1187
PsrI GAACNNNNNNTAC 2 cut(s) 876, 908
PstI CTGCAG 1 cut(s) 2040
PstNI CAGNNNCTG 2 cut(s) 1910, 2168
PsuI RGATCY 5 cut(s) 48, 250, 295, 2171, 2548
PsyI GACNNNGTC 1 cut(s) 1711
PvuII CAGCTG 4 cut(s) 698, 779, 1163, 2165
RsaI GTAC 6 cut(s) 607, 820, 1724, 1914, 2312, 2562
RsaNI GTAC 6 cut(s) 606, 819, 1723, 1913, 2311, 2561
RseI CAYNNNNRTG 1 cut(s) 2585
SacI GAGCTC 2 cut(s) 60, 2580
SapI GCTCTTC 2 cut(s) 60, 2096
SaqAI TTAA 9 cut(s) 72, 108, 783, 918, 963, 1002, 1029, 1203, 1467
Sau96I GGNCC 6 cut(s) 1438, 1496, 1900, 1991, 2255, 2593
SchI GAGTC 3 cut(s) 1286, 1649, 2399
ScrFI CCNGG 8 cut(s) 1058, 1223, 1857, 1964, 2212, 2433, 2434, 2601
SduI GDGCHC 2 cut(s) 60, 2580
SexAI ACCWGGT 2 cut(s) 1056, 2599
SfaNI GCATC 5 cut(s) 91, 664, 1182, 1346, 2203
SfcI CTRYAG 2 cut(s) 546, 2036
Sfr274I CTCGAG 1 cut(s) 1187
SfuI TTCGAA 2 cut(s) 17, 2655
SinI GGWCC 3 cut(s) 1438, 1900, 1991
SlaI CTCGAG 1 cut(s) 1187
SmaI CCCGGG 1 cut(s) 2434
SmiMI CAYNNNNRTG 1 cut(s) 2585
SmlI CTYRAG 3 cut(s) 59, 1187, 2381
SmoI CTYRAG 3 cut(s) 59, 1187, 2381
SpeI ACTAGT 1 cut(s) 815
SspI AATATT 2 cut(s) 721, 1702
SspMI CTAG 6 cut(s) 671, 816, 1151, 1667, 1824, 1925
SstI GAGCTC 2 cut(s) 60, 2580
StyD4I CCNGG 8 cut(s) 1056, 1221, 1855, 1962, 2210, 2431, 2432, 2599
StyI CCWWGG 2 cut(s) 740, 1614
TaaI ACNGT 9 cut(s) 133, 578, 1170, 1465, 1537, 1768, 2084, 2357, 2565
TaiI ACGT 5 cut(s) 828, 1101, 1274, 2371, 2529
TatI WGTACW 1 cut(s) 818
TauI GCSGC 3 cut(s) 125, 431, 1955
TfiI GAWTC 8 cut(s) 14, 287, 310, 565, 1510, 2131, 2182, 2456
Tru1I TTAA 9 cut(s) 72, 108, 783, 918, 963, 1002, 1029, 1203, 1467
Tru9I TTAA 9 cut(s) 72, 108, 783, 918, 963, 1002, 1029, 1203, 1467
TscAI CASTG 6 cut(s) 166, 652, 1183, 1603, 2587, 2622
TseFI GTSAC 2 cut(s) 8, 1928
Tsp45I GTSAC 2 cut(s) 8, 1928
TspDTI ATGAA 7 cut(s) 138, 654, 972, 1335, 2116, 2324, 2427
TspGWI ACGGA 2 cut(s) 200, 1559
TspMI CCCGGG 1 cut(s) 2432
TspRI CASTG 6 cut(s) 166, 652, 1183, 1603, 2587, 2622
Tth111I GACNNNGTC 1 cut(s) 1711
VpaK11BI GGWCC 3 cut(s) 1438, 1900, 1991
VspI ATTAAT 1 cut(s) 918
XapI RAATTY 4 cut(s) 190, 1070, 1414, 2426
XceI RCATGY 3 cut(s) 755, 2248, 2491
XhoI CTCGAG 1 cut(s) 1187
XmaI CCCGGG 1 cut(s) 2432
XmiI GTMKAC 1 cut(s) 1095
XmnI GAANNNNTTC 3 cut(s) 23, 1404, 2426
XspI CTAG 6 cut(s) 671, 816, 1151, 1667, 1824, 1925
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.