Rh7CG170600

Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi trans-Golgi network (TGN) and or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0006717
Physical Location & Seq
Forward (+)
14362506 .. 14369303
6798 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG170600.1

Sequence Viewer

Length: 2646 bp
ATGTACTTTGTTTTAAGTGTGGTGCAGGATAAGAGGAAAGATGCTGTTAAGAAGGTGATTGCTGCAATGACAGTTGGGAAGGATGTCTCGTCGCTTTTCACAGATGTAGTGAATTGCATGCAAACAGAAAATTTGGAGCTGAAGAAGCTGGTTTATTTGTATCTGATAAATTATGCTAAAAGCCAGCCTGACCTAGCAATTCTTGCTGTGAATACATTTGTCAAGGATTCACAGGACCCAAATCCTTTGATTCGCGCTTTAGCCGTTCGGACAATGGGATGCATTCGTGTTGATAAAATTACAGAATATCTATGTGATCCCCTTCAGAGATGCCTTAAGGATGATGATCCATATGTTCGCAAGACAGCAGCCATATGTGTTGCCAAACTTTACGACATAAATGCTGAGTTAGTTGAGGATAGGGGTTTCCTGGAATCTCTCAAGGATTTGATTTCTGATAATAATCCTATGGTTGTTGCAAATGCTGTGGCGGCGCTTGCTGAAATTCAAGAGAATAGTAATAGACCCATCTTTGAGATGACCAGTCACACTCTGACAAAGCTCCTTACTGCCTTGAATGAATGCACAGAGTGGGGACAAGTATTTATACTGGATGCTCTTTCTAGATACAAGGCAGCTGATGCCCGTGAAGCTGAAAATATAGTAGAGCGAGTTACCCCGCGACTACAGCATGCTAACTGTGCTGTCGTGCTTTCAGCTGTAAAGATGATCCTCCAACAAATGGAACTTATCACCAGTACCGATGTCGTCAGAAATCTTTGCAAAAAGATGGCTCCTCCACTCGTGACACTACTCTCTGCTGAGCCTGAGATACAATATGTTGCATTAAGAAACATCAACCTTATAGTACAAAGACGGCCCACAATTCTTGCTCATGAAATTAAGGTATTCTTTTGCAAATACAATGATCCTATTTATGTAAAGATGGAAAAGTTAGAAATTATGATAAAGCTTGCTTCAGATCGAAACATAGACCAGGTTCTATTGGAGTTTAAAGAGTATGCTACTGAAGTAGATGTTGATTTTGTCCGAAAGGCTGTCCGTGCCATTGGTCGCTGTGCCATCAAATTAGAAAGAGCAGCTGAACGGTGCATTACTGTATTACTTGAGTTGATTAAGATCAAAGTCAATTACGTAGTTCAAGAGGCCATTATTGTCATCAAAGATATCTTTAGAAGATATCCCAATACCTATGAATCCATCATTGCAACTCTATGCGAAAGCCTAGACACTTTAGATGAACCAGAAGCCAAGGCATCGATGATCTGGATAATTGGTGAATATGCGGAAAGAATTGACAATGCTGATGAGCTCCTTGAAAGCTTTCTGGAAAGTTTCCCCGAAGAACCTGCACATGTCCAATTGCAGTTGCTGACTGCAACTGTCAAACTTTTTCTTAAAAAGCCCACCGAAGGACCACAACAGATGATTCAGGTTGTTCTGAATAATGCTACTGTGGAGACAGACAATCCTGATCTGAGAGATCGTGCATACATATATTGGCGCCTTCTATCAACTGATCCTGAGGCAGCCAAGGATGTTGTTTTAGCTGAGAAGCCAGTGATCAGTGACGATTCAAACCTGCTTGATTCATCACTTCTGAATGAACTTCTTGCAAACATTGCTACGTTATCCTCTGTGTATCACAAGCCACCAGAAGCGTTTGTTACCCGTGTGAAGACCTCATCGCCGAGACCTGAAGATGAGGAGTATGGTAGCGAAACAGGAAATTCTGAATCAGCAGCTGATAGTGCCGCTACTGGTGCATCCCCACCACCAACTAGTTCAGGTAGTGCTCCATATGCTGCACAAAGGCAACCAGTCCCTGCACCAGCTTCGCCTGCTGCTCCAGTGCCAGATTTACTTGGTGATCTGATTGGCCTGGATAACAGTGCCATTGTCCCTGTGGATCAGCCTGCTGCTCCTGCTGGACCTCCGTTGCCTGTCTTACTACCAGCATCAACCGGTCAAGGTTTACAAATCAGTGCTCAGTTGACACGCAGGGATGGTCAAATATTTTACAGTATATTGTTTGAGAACAACACGCAGGTCCCATTAGATGGGTTTATGATTCAGTTCAACAAAAATACTTTCGGTCTTGCAGCTGCTGGACCCCTTCAGGTTCCACAAATTCAACCCGGGACATCAGCAGGGACTCTCCTGCCTATGGTTACATTCCAGAATATGTCTCAAGGTCCTCCAAGCTCATTATTGCAGGTTGCTGTGAAAAACAATCAACAACCTGTCTGGTACTTCAACGATAAAATCCCATTGCATGTCTTCTTTACCGAGGATGGCAGAATGGAGCGTGCAAATTTTCTTGAGACTTGGAGATCCCTTCCTGATTCAAATGAGATTACAAAAGACTTCCCTGGAATTGTGGTGGGTAATGTTGAAGCAACTCTGGACCGCCTGGCTGCTACAAACATGTTCTTTATTGCGAAGCGAAAACACGCCAACCAGGATGTCTTCTATTTCTCTGCAAAGATACCTCGAGGAATACCCTTCCTAATTGAACTCACTACAGTAGTAAATACCCCTGGGGTCAAGTGCGCAATCAAGACTCCAAGCCCAGAATCAGCACCCCTTTTCTTTGAAGCTGTGGAGACACTCCTGAAGGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0009506 GO:0016020 GO:0030054 GO:0044464 GO:0055044 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko04142 map04142
Pfam Domains
Protein Families
Adaptin_N Alpha_adaptinC2 B2-adapt-app_C

Protein Analysis

881

Amino Acids

97.69

Weight (kDa)

5.02

Isoelectric Point (pI)

41.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Adaptin_N PF01602 10 - 514 4.1e-166 Adaptin N terminal region
HEAT_2 PF13646 78 - 132 2.4e-06 HEAT repeats
Cnd1 PF12717 83 - 246 1.9e-65 non-SMC mitotic condensation complex subunit 1
Alpha_adaptinC2 PF02883 660 - 759 1.5e-11 Adaptin C-terminal domain
B2-adapt-app_C PF09066 770 - 879 2.1e-31 Beta2-adaptin appendage, C-terminal sub-domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 2514
Acc16I TGCGCA 1 cut(s) 2575
Acc36I ACCTGC 4 cut(s) 1378, 1611, 2059, 2227
AccB1I GGYRCC 1 cut(s) 1524
AccB7I CCANNNNNTGG 2 cut(s) 742, 2081
AccII CGCG 2 cut(s) 255, 682
AciI CCGC 5 cut(s) 491, 680, 1307, 1776, 2431
AclWI GGATC 7 cut(s) 311, 341, 724, 923, 1535, 1938, 2349
AcsI RAATTY 5 cut(s) 130, 504, 1750, 2151, 2335
AcuI CTGAAG 6 cut(s) 161, 308, 963, 1050, 1740, 2123
AcyI GRCGYC 1 cut(s) 1525
AdeI CACNNNGTG 1 cut(s) 591
AfaI GTAC 4 cut(s) 5, 760, 870, 2273
AfiI CCNNNNNNNGG 4 cut(s) 742, 1433, 2081, 2188
AflII CTTAAG 1 cut(s) 335
AflIII ACRYGT 2 cut(s) 1375, 2448
AgeI ACCGGT 1 cut(s) 1985
AhlI ACTAGT 1 cut(s) 1802
AjnI CCWGG 7 cut(s) 429, 996, 1902, 2392, 2433, 2481, 2560
Alw21I GWGCWC 3 cut(s) 1335, 1819, 2011
Alw26I GTCTC 6 cut(s) 91, 1475, 1708, 2214, 2339, 2621
AlwI GGATC 7 cut(s) 311, 341, 724, 923, 1535, 1938, 2349
AlwNI CAGNNNCTG 4 cut(s) 1393, 1766, 1847, 2129
Ama87I CYCGRG 2 cut(s) 2159, 2514
AoxI GGCC 3 cut(s) 878, 1167, 1900
ApoI RAATTY 5 cut(s) 130, 504, 1750, 2151, 2335
AsiGI ACCGGT 1 cut(s) 1985
Asp700I GAANNNNTTC 1 cut(s) 1344
AspLEI GCGC 4 cut(s) 257, 496, 1527, 2576
AspS9I GGNCC 8 cut(s) 235, 879, 1436, 1952, 2071, 2132, 2216, 2428
AsuC2I CCSGG 2 cut(s) 2160, 2161
AsuHPI GGTGA 4 cut(s) 67, 745, 1310, 1901
AvaI CYCGRG 2 cut(s) 2159, 2514
AvaII GGWCC 7 cut(s) 235, 1436, 1952, 2071, 2132, 2216, 2428
AxyI CCTNAGG 1 cut(s) 1545
BanI GGYRCC 1 cut(s) 1524
BanII GRGCYC 1 cut(s) 1335
BauI CACGAG 1 cut(s) 803
BbsI GAAGAC 3 cut(s) 1706, 2293, 2482
Bbv12I GWGCWC 3 cut(s) 1335, 1819, 2011
BccI CCATC 8 cut(s) 536, 784, 940, 1091, 1229, 2021, 2075, 2309
BceAI ACGGC 2 cut(s) 248, 893
BcgI CGANNNNNNTGC 6 cut(s) 383, 417, 1352, 1386, 1839, 1873
BciT130I CCWGG 7 cut(s) 431, 998, 1904, 2394, 2435, 2483, 2562
BclI TGATCA 1 cut(s) 1584
BcnI CCSGG 2 cut(s) 2160, 2161
BcoDI GTCTC 6 cut(s) 91, 1475, 1708, 2214, 2339, 2621
BcuI ACTAGT 1 cut(s) 1802
BfaI CTAG 4 cut(s) 194, 624, 1247, 1803
BfmI CTRYAG 2 cut(s) 686, 2544
BfoI RGCGCY 2 cut(s) 497, 1528
BfrI CTTAAG 1 cut(s) 335
BfuAI ACCTGC 4 cut(s) 1378, 1611, 2059, 2227
BlpI GCTNAGC 1 cut(s) 822
Bme1390I CCNGG 9 cut(s) 431, 998, 1904, 2160, 2161, 2394, 2435, 2483, 2562
Bme18I GGWCC 7 cut(s) 235, 1436, 1952, 2071, 2132, 2216, 2428
BmeT110I CYCGRG 2 cut(s) 2159, 2514
BmgT120I GGNCC 8 cut(s) 235, 879, 1436, 1952, 2071, 2132, 2216, 2428
BmiI GGNNCC 6 cut(s) 237, 795, 1526, 2073, 2134, 2145
BmrFI CCNGG 9 cut(s) 431, 998, 1904, 2160, 2161, 2394, 2435, 2483, 2562
BmsI GCATC 8 cut(s) 31, 269, 320, 604, 631, 1286, 1796, 1988
BpiI GAAGAC 3 cut(s) 1706, 2293, 2482
BpmI CTGGAG 1 cut(s) 1854
Bpu1102I GCTNAGC 1 cut(s) 822
BpuEI CTTGAG 4 cut(s) 425, 1148, 2196, 2363
BpuMI CCSGG 2 cut(s) 2160, 2161
Bsa29I ATCGAT 1 cut(s) 1280
BsaAI YACGTR 1 cut(s) 1156
BsaBI GATNNNNATC 3 cut(s) 345, 462, 1139
BsaHI GRCGYC 1 cut(s) 1525
BsaI GGTCTC 1 cut(s) 1708
BsaJI CCNNGG 7 cut(s) 1272, 1554, 2159, 2310, 2392, 2560, 2561
BsaWI WCCGGW 1 cut(s) 1985
Bsc4I CCNNNNNNNGG 4 cut(s) 742, 1433, 2081, 2188
Bse118I RCCGGY 1 cut(s) 1985
Bse1I ACTGG 7 cut(s) 543, 615, 756, 1580, 1786, 1841, 1871
Bse21I CCTNAGG 1 cut(s) 1545
Bse3DI GCAATG 4 cut(s) 72, 1224, 1641, 2291
Bse8I GATNNNNATC 3 cut(s) 345, 462, 1139
BseBI CCWGG 7 cut(s) 431, 998, 1904, 2394, 2435, 2483, 2562
BseCI ATCGAT 1 cut(s) 1280
BseDI CCNNGG 7 cut(s) 1272, 1554, 2159, 2310, 2392, 2560, 2561
BseGI GGATG 9 cut(s) 88, 284, 346, 619, 1564, 1787, 2032, 2320, 2491
BseJI GATNNNNATC 3 cut(s) 345, 462, 1139
BseLI CCNNNNNNNGG 4 cut(s) 742, 1433, 2081, 2188
BseMI GCAATG 4 cut(s) 72, 1224, 1641, 2291
BseMII CTCAG 7 cut(s) 396, 813, 819, 1490, 1536, 1563, 2024
BseNI ACTGG 7 cut(s) 543, 615, 756, 1580, 1786, 1841, 1871
BseRI GAGGAG 2 cut(s) 786, 1742
BsgI GTGCAG 4 cut(s) 44, 1356, 1812, 1833
Bsh1236I CGCG 2 cut(s) 255, 682
BshFI GGCC 3 cut(s) 880, 1169, 1902
BshNI GGYRCC 1 cut(s) 1524
BshTI ACCGGT 1 cut(s) 1985
BshVI ATCGAT 1 cut(s) 1280
BsiHKAI GWGCWC 3 cut(s) 1335, 1819, 2011
BsiHKCI CYCGRG 2 cut(s) 2159, 2514
BsiSI CCGG 2 cut(s) 1986, 2160
BslFI GGGAC 6 cut(s) 609, 1829, 1907, 2057, 2176, 2188
BslI CCNNNNNNNGG 4 cut(s) 742, 1433, 2081, 2188
BsmAI GTCTC 6 cut(s) 91, 1475, 1708, 2214, 2339, 2621
BsmFI GGGAC 6 cut(s) 609, 1829, 1907, 2057, 2176, 2188
BsmI GAATGC 2 cut(s) 282, 587
BsnI GGCC 3 cut(s) 880, 1169, 1902
Bso31I GGTCTC 1 cut(s) 1708
BsoBI CYCGRG 2 cut(s) 2159, 2514
Bsp1286I GDGCHC 3 cut(s) 1335, 1819, 2011
Bsp1720I GCTNAGC 1 cut(s) 822
BspACI CCGC 5 cut(s) 491, 680, 1307, 1776, 2431
BspANI GGCC 3 cut(s) 880, 1169, 1902
BspCNI CTCAG 7 cut(s) 397, 814, 820, 1491, 1537, 1564, 2023
BspDI ATCGAT 1 cut(s) 1280
BspFNI CGCG 2 cut(s) 255, 682
BspHI TCATGA 1 cut(s) 895
BspLI GGNNCC 6 cut(s) 237, 795, 1526, 2073, 2134, 2145
BspMI ACCTGC 4 cut(s) 1378, 1611, 2059, 2227
BspPI GGATC 7 cut(s) 311, 341, 724, 923, 1535, 1938, 2349
BspT107I GGYRCC 1 cut(s) 1524
BspTI CTTAAG 1 cut(s) 335
BspTNI GGTCTC 1 cut(s) 1708
BsrDI GCAATG 4 cut(s) 72, 1224, 1641, 2291
BsrFI RCCGGY 1 cut(s) 1985
BsrI ACTGG 7 cut(s) 543, 615, 756, 1580, 1786, 1841, 1871
BssAI RCCGGY 1 cut(s) 1985
BssECI CCNNGG 7 cut(s) 1272, 1554, 2159, 2310, 2392, 2560, 2561
BssNI GRCGYC 1 cut(s) 1525
BssSI CACGAG 1 cut(s) 803
BssT1I CCWWGG 2 cut(s) 1272, 1554
Bst2BI CACGAG 1 cut(s) 803
Bst2UI CCWGG 7 cut(s) 431, 998, 1904, 2394, 2435, 2483, 2562
Bst4CI ACNGT 9 cut(s) 73, 701, 1110, 1120, 1405, 1477, 1913, 2045, 2548
BstACI GRCGYC 1 cut(s) 1525
BstAFI CTTAAG 1 cut(s) 335
BstAPI GCANNNNNTGC 3 cut(s) 203, 641, 1643
BstBAI YACGTR 1 cut(s) 1156
BstC8I GCNNGC 8 cut(s) 119, 185, 498, 693, 975, 1863, 1938, 2331
BstDEI CTNAG 7 cut(s) 405, 822, 828, 1499, 1545, 1572, 2010
BstF5I GGATG 9 cut(s) 88, 284, 346, 619, 1564, 1787, 2032, 2320, 2491
BstFNI CGCG 2 cut(s) 255, 682
BstH2I RGCGCY 2 cut(s) 497, 1528
BstHHI GCGC 4 cut(s) 257, 496, 1527, 2576
BstMAI GTCTC 6 cut(s) 91, 1475, 1708, 2214, 2339, 2621
BstNI CCWGG 7 cut(s) 431, 998, 1904, 2394, 2435, 2483, 2562
BstNSI RCATGY 5 cut(s) 121, 695, 1379, 2300, 2452
BstSCI CCNGG 9 cut(s) 429, 996, 1902, 2158, 2159, 2392, 2433, 2481, 2560
BstSFI CTRYAG 2 cut(s) 686, 2544
BstSNI TACGTA 1 cut(s) 1156
BstUI CGCG 2 cut(s) 255, 682
BstV2I GAAGAC 3 cut(s) 1706, 2293, 2482
BstX2I RGATCY 1 cut(s) 2354
BstYI RGATCY 1 cut(s) 2354
Bsu15I ATCGAT 1 cut(s) 1280
Bsu36I CCTNAGG 1 cut(s) 1545
BsuRI GGCC 3 cut(s) 880, 1169, 1902
BsuTUI ATCGAT 1 cut(s) 1280
BtgZI GCGATG 1 cut(s) 1692
BtsCI GGATG 9 cut(s) 88, 284, 346, 619, 1564, 1787, 2032, 2320, 2491
BtsIMutI CAGTG 5 cut(s) 1587, 1594, 1878, 1918, 2011
BveI ACCTGC 4 cut(s) 1378, 1611, 2059, 2227
Cac8I GCNNGC 8 cut(s) 119, 185, 498, 693, 975, 1863, 1938, 2331
CaiI CAGNNNCTG 4 cut(s) 1393, 1766, 1847, 2129
CciI TCATGA 1 cut(s) 895
CfoI GCGC 4 cut(s) 257, 496, 1527, 2576
Cfr10I RCCGGY 1 cut(s) 1985
Cfr13I GGNCC 8 cut(s) 235, 879, 1436, 1952, 2071, 2132, 2216, 2428
Cfr9I CCCGGG 1 cut(s) 2159
ClaI ATCGAT 1 cut(s) 1280
CsiI ACCWGGT 1 cut(s) 996
Csp6I GTAC 4 cut(s) 4, 759, 869, 2272
CspAI ACCGGT 1 cut(s) 1985
CspCI CAANNNNNGTGG 4 cut(s) 468, 503, 871, 906
CviAII CATG 6 cut(s) 118, 692, 896, 1376, 2297, 2449
CviQI GTAC 4 cut(s) 4, 759, 869, 2272
DdeI CTNAG 7 cut(s) 405, 822, 828, 1499, 1545, 1572, 2010
DinI GGCGCC 1 cut(s) 1526
DraI TTTAAA 1 cut(s) 1015
DraIII CACNNNGTG 1 cut(s) 591
Ecl136II GAGCTC 1 cut(s) 1333
Eco105I TACGTA 1 cut(s) 1156
Eco130I CCWWGG 2 cut(s) 1272, 1554
Eco24I GRGCYC 1 cut(s) 1335
Eco31I GGTCTC 1 cut(s) 1708
Eco32I GATATC 2 cut(s) 1189, 1202
Eco47I GGWCC 7 cut(s) 235, 1436, 1952, 2071, 2132, 2216, 2428
Eco53kI GAGCTC 1 cut(s) 1333
Eco57I CTGAAG 6 cut(s) 161, 308, 963, 1050, 1740, 2123
Eco81I CCTNAGG 1 cut(s) 1545
Eco88I CYCGRG 2 cut(s) 2159, 2514
EcoICRI GAGCTC 1 cut(s) 1333
EcoO109I RGGNCCY 3 cut(s) 235, 2071, 2216
EcoRII CCWGG 7 cut(s) 429, 996, 1902, 2392, 2433, 2481, 2560
EcoRV GATATC 2 cut(s) 1189, 1202
EcoT14I CCWWGG 2 cut(s) 1272, 1554
EcoT22I ATGCAT 1 cut(s) 284
EcoT38I GRGCYC 1 cut(s) 1335
EgeI GGCGCC 1 cut(s) 1526
EheI GGCGCC 1 cut(s) 1526
ErhI CCWWGG 2 cut(s) 1272, 1554
FaeI CATG 6 cut(s) 121, 695, 899, 1379, 2300, 2452
FalI AAGNNNNNCTT 2 cut(s) 896, 928
FaqI GGGAC 6 cut(s) 609, 1829, 1907, 2057, 2176, 2188
FatI CATG 6 cut(s) 117, 691, 895, 1375, 2296, 2448
FauI CCCGC 1 cut(s) 687
FauNDI CATATG 3 cut(s) 352, 374, 1822
FbaI TGATCA 1 cut(s) 1584
FokI GGATG 9 cut(s) 95, 291, 353, 626, 1571, 1774, 2039, 2327, 2498
FriOI GRGCYC 1 cut(s) 1335
FspBI CTAG 4 cut(s) 194, 624, 1247, 1803
FspI TGCGCA 1 cut(s) 2575
GlaI GCGC 4 cut(s) 256, 495, 1526, 2575
GsuI CTGGAG 1 cut(s) 1854
HaeII RGCGCY 2 cut(s) 497, 1528
HaeIII GGCC 3 cut(s) 880, 1169, 1902
HapII CCGG 2 cut(s) 1986, 2160
HhaI GCGC 4 cut(s) 257, 496, 1527, 2576
Hin1I GRCGYC 1 cut(s) 1525
Hin1II CATG 6 cut(s) 121, 695, 899, 1379, 2300, 2452
Hin6I GCGC 4 cut(s) 255, 494, 1525, 2574
HinP1I GCGC 4 cut(s) 255, 494, 1525, 2574
HincII GTYRAC 1 cut(s) 2016
HindII GTYRAC 1 cut(s) 2016
HindIII AAGCTT 2 cut(s) 971, 1342
HpaII CCGG 2 cut(s) 1986, 2160
HphI GGTGA 4 cut(s) 67, 745, 1310, 1901
Hpy166II GTNNAC 2 cut(s) 1997, 2016
Hpy8I GTNNAC 2 cut(s) 1997, 2016
Hpy99I CGWCG 1 cut(s) 94
HpyAV CCTTC 9 cut(s) 46, 73, 332, 1427, 1538, 2147, 2369, 2536, 2632
HpyCH4III ACNGT 9 cut(s) 73, 701, 1110, 1120, 1405, 1477, 1913, 2045, 2548
HpyCH4IV ACGT 2 cut(s) 1155, 1649
HpyF3I CTNAG 7 cut(s) 405, 822, 828, 1499, 1545, 1572, 2010
HpySE526I ACGT 2 cut(s) 1155, 1649
Hsp92I GRCGYC 1 cut(s) 1525
Hsp92II CATG 6 cut(s) 121, 695, 899, 1379, 2300, 2452
HspAI GCGC 4 cut(s) 255, 494, 1525, 2574
KasI GGCGCC 1 cut(s) 1524
Ksp22I TGATCA 1 cut(s) 1584
LmnI GCTCC 8 cut(s) 136, 567, 799, 1338, 1822, 1873, 1948, 2326
LweI GCATC 8 cut(s) 31, 269, 320, 604, 631, 1286, 1796, 1988
MabI ACCWGGT 1 cut(s) 996
MaeI CTAG 4 cut(s) 194, 624, 1247, 1803
MaeII ACGT 2 cut(s) 1155, 1649
MaeIII GTNAC 6 cut(s) 545, 673, 805, 1589, 1687, 2191
MboII GAAGA 7 cut(s) 154, 1209, 1376, 1711, 1733, 2293, 2482
MfeI CAATTG 1 cut(s) 1382
MflI RGATCY 1 cut(s) 2354
MhlI GDGCHC 3 cut(s) 1335, 1819, 2011
Mly113I GGCGCC 1 cut(s) 1525
MlyI GAGTC 2 cut(s) 2170, 2578
MmeI TCCRAC 1 cut(s) 760
Mph1103I ATGCAT 1 cut(s) 284
MroXI GAANNNNTTC 1 cut(s) 1344
MseI TTAA 8 cut(s) 14, 48, 336, 848, 903, 1014, 1137, 1419
MspA1I CMGCKG 5 cut(s) 638, 719, 1103, 1766, 2126
MspCI CTTAAG 1 cut(s) 335
MspI CCGG 2 cut(s) 1986, 2160
MspR9I CCNGG 9 cut(s) 431, 998, 1904, 2160, 2161, 2394, 2435, 2483, 2562
MunI CAATTG 1 cut(s) 1382
Mva1269I GAATGC 2 cut(s) 282, 587
MvaI CCWGG 7 cut(s) 431, 998, 1904, 2394, 2435, 2483, 2562
MvnI CGCG 2 cut(s) 255, 682
NarI GGCGCC 1 cut(s) 1525
NciI CCSGG 2 cut(s) 2160, 2161
NdeI CATATG 3 cut(s) 352, 374, 1822
NlaIII CATG 6 cut(s) 121, 695, 899, 1379, 2300, 2452
NlaIV GGNNCC 6 cut(s) 237, 795, 1526, 2073, 2134, 2145
NmeAIII GCCGAG 1 cut(s) 1737
NmuCI GTSAC 3 cut(s) 545, 805, 1589
NsbI TGCGCA 1 cut(s) 2575
NsiI ATGCAT 1 cut(s) 284
NspI RCATGY 5 cut(s) 121, 695, 1379, 2300, 2452
PaeI GCATGC 2 cut(s) 121, 695
PaeR7I CTCGAG 1 cut(s) 2514
PagI TCATGA 1 cut(s) 895
PasI CCCWGGG 1 cut(s) 2561
PciI ACATGT 2 cut(s) 1375, 2448
PctI GAATGC 2 cut(s) 282, 587
PdmI GAANNNNTTC 1 cut(s) 1344
PflMI CCANNNNNTGG 2 cut(s) 742, 2081
PfoI TCCNGGA 1 cut(s) 429
PinAI ACCGGT 1 cut(s) 1985
PleI GAGTC 2 cut(s) 2170, 2578
PluTI GGCGCC 1 cut(s) 1528
PpsI GAGTC 2 cut(s) 2170, 2578
Ppu21I YACGTR 1 cut(s) 1156
PpuMI RGGWCCY 3 cut(s) 235, 2071, 2216
PscI ACATGT 2 cut(s) 1375, 2448
Psp124BI GAGCTC 1 cut(s) 1335
Psp5II RGGWCCY 3 cut(s) 235, 2071, 2216
Psp6I CCWGG 7 cut(s) 429, 996, 1902, 2392, 2433, 2481, 2560
PspGI CCWGG 7 cut(s) 429, 996, 1902, 2392, 2433, 2481, 2560
PspN4I GGNNCC 6 cut(s) 237, 795, 1526, 2073, 2134, 2145
PspPI GGNCC 8 cut(s) 235, 879, 1436, 1952, 2071, 2132, 2216, 2428
PspPPI RGGWCCY 3 cut(s) 235, 2071, 2216
PspXI VCTCGAGB 1 cut(s) 2514
PstNI CAGNNNCTG 4 cut(s) 1393, 1766, 1847, 2129
PsuI RGATCY 1 cut(s) 2354
PvuII CAGCTG 5 cut(s) 638, 719, 1103, 1766, 2126
RsaI GTAC 4 cut(s) 5, 760, 870, 2273
RsaNI GTAC 4 cut(s) 4, 759, 869, 2272
SacI GAGCTC 1 cut(s) 1335
SaqAI TTAA 8 cut(s) 14, 48, 336, 848, 903, 1014, 1137, 1419
Sau96I GGNCC 8 cut(s) 235, 879, 1436, 1952, 2071, 2132, 2216, 2428
SchI GAGTC 2 cut(s) 2170, 2578
ScrFI CCNGG 9 cut(s) 431, 998, 1904, 2160, 2161, 2394, 2435, 2483, 2562
SduI GDGCHC 3 cut(s) 1335, 1819, 2011
SexAI ACCWGGT 1 cut(s) 996
SfaNI GCATC 8 cut(s) 31, 269, 320, 604, 631, 1286, 1796, 1988
SfcI CTRYAG 2 cut(s) 686, 2544
SfoI GGCGCC 1 cut(s) 1526
Sfr274I CTCGAG 1 cut(s) 2514
SinI GGWCC 7 cut(s) 235, 1436, 1952, 2071, 2132, 2216, 2428
SlaI CTCGAG 1 cut(s) 2514
SmaI CCCGGG 1 cut(s) 2161
SmlI CTYRAG 6 cut(s) 335, 440, 1127, 2211, 2342, 2514
SmoI CTYRAG 6 cut(s) 335, 440, 1127, 2211, 2342, 2514
SnaBI TACGTA 1 cut(s) 1156
SpeI ACTAGT 1 cut(s) 1802
SphI GCATGC 2 cut(s) 121, 695
SsiI CCGC 5 cut(s) 491, 680, 1307, 1776, 2431
SspDI GGCGCC 1 cut(s) 1524
SspI AATATT 1 cut(s) 2037
SspMI CTAG 4 cut(s) 194, 624, 1247, 1803
SstI GAGCTC 1 cut(s) 1335
StyD4I CCNGG 9 cut(s) 429, 996, 1902, 2158, 2159, 2392, 2433, 2481, 2560
StyI CCWWGG 2 cut(s) 1272, 1554
TaaI ACNGT 9 cut(s) 73, 701, 1110, 1120, 1405, 1477, 1913, 2045, 2548
TaiI ACGT 2 cut(s) 1158, 1652
TaqI TCGA 3 cut(s) 985, 1280, 2515
TaqII GACCGA 1 cut(s) 2105
TatI WGTACW 2 cut(s) 3, 868
TauI GCSGC 2 cut(s) 494, 1778
Tru1I TTAA 8 cut(s) 14, 48, 336, 848, 903, 1014, 1137, 1419
Tru9I TTAA 8 cut(s) 14, 48, 336, 848, 903, 1014, 1137, 1419
TscAI CASTG 5 cut(s) 1587, 1594, 1878, 1918, 2011
TseFI GTSAC 3 cut(s) 545, 805, 1589
Tsp45I GTSAC 3 cut(s) 545, 805, 1589
TspDTI ATGAA 6 cut(s) 594, 912, 1230, 1275, 1602, 1641
TspGWI ACGGA 2 cut(s) 1052, 1947
TspMI CCCGGG 1 cut(s) 2159
TspRI CASTG 5 cut(s) 1587, 1594, 1878, 1918, 2011
Van91I CCANNNNNTGG 2 cut(s) 742, 2081
Vha464I CTTAAG 1 cut(s) 335
VpaK11BI GGWCC 7 cut(s) 235, 1436, 1952, 2071, 2132, 2216, 2428
XapI RAATTY 5 cut(s) 130, 504, 1750, 2151, 2335
XbaI TCTAGA 1 cut(s) 623
XceI RCATGY 5 cut(s) 121, 695, 1379, 2300, 2452
XcmI CCANNNNNNNNNTGG 1 cut(s) 1924
XhoI CTCGAG 1 cut(s) 2514
XmaI CCCGGG 1 cut(s) 2159
XmnI GAANNNNTTC 1 cut(s) 1344
XspI CTAG 4 cut(s) 194, 624, 1247, 1803
Zsp2I ATGCAT 1 cut(s) 284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.