Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0006717

Physical Location & Seq

Genomic Coordinates Forward (+)

14604312 .. 14611492

Gene Structure 7181 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG163900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2346 bp

ATGACAGTTGGGAAGGATGTCTCGTCGCTTTTCACGGATGTAGTGAATTGCATGCAAACAGAAAATTTGGAGCTGAAGAAGCTGGTTTATTTGTATCTGATAAATTATGCTAAAAGCCAGCCTGACCTAGCAATTCTTGCTGTGAATACATTTGTCAAGGATTCACAGGACCCAAATCCTTTGATTCGCGCTTTAGCCGTTCGGACAATGGGATGCATTCGTGTTGATAAAATTACAGAATATCTATGTGATCCCCTTCAGAGATGCCTTAAGGATGATGATCCATATGTTCGCAAGACAGCAGCCATATGTGTCGCCAAACTTTACGACATAAATGCTGAGTTAGTTGAGGATAGGGGTTTCCTGGAATCTCTCAAGGATTTGATTTCTGATAATAATCCTATGGTTGTTGCAAATGCTGTGGCTGCGCTTGCTGAAATTCAAGAGAATAGTAATAGACCCATCTTTGAGATGACCAGTCACACTCTGACAAAGCTCCTTACTGCATTGAATGAATGCACAGAGTGGGGACAAGTATTTATACTGGATGCTCTTTCTAGATACAAGGCAGCTGATGCCCGTGAAGCTGAAAATATAGTAGAGCGAGTTACCCCGCGACTACAGCATGCTAACTGTGCTGTCGTGCTTTCAGCTGTAAAGATGATCCTCCAACAAATGGAACTTATCACCAGTACCGATGTTGTCAGAAATCTTTGCAAAAAGATGGCTCCTCCACTCGTGACACTACTCTCTGCTGAGCCTGAGATACAATATGTTGCATTAAGAAACATCAACCTTATAGTACAAAGACGGCCCACAATTCTTGCTCATGAAATTAAGGTATTCTTTTGCAAGTACAATGATCCTATTTATGTAAAGATGGAAAAGTTAGAAATTATGATAAAGCTTGCTTCAGATCGAAACATAGACCAGGTTCTATTGGAGTTTAAAGAGTATGCTACTGAAGTAGATGTTGATTTTGTCCGAAAGGCTGTCCGTGCCATTGGTCGCTGTGCCATCAAATTAGAAAGAGCAGCTGAACGGTGCATTACTGTATTACTTGAGTTGATTAAGATCAAAGTCAATTACGTAGTTCAAGAGGCCATTATTGTCATCAAAGATATCTTTAGAAGATATCCCAATACCTATGAATCCATCATTGCAACTCTATGCGAAAGCCTAGACACTTTAGATGAACCAGAAGCCAAGGCATCGATGATCTGGATAATTGGTGAATATGCGGAAAGAATTGACAATGCTGATGAGCTCCTTGAAAGCTTTCTGGAAAGTTTCCCCGAAGAACCTGCACATGTCCAATTGCAGTTGCTGACTGCAACTGTCAAACTTTTTCTTAAAAAGCCCACCGAAGGACCACAACAGATGATTCAGGTTGTTCTGAATAATGCTACTGTGGAGACAGACAATCCTGATCTGAGAGATCGTGCATACATATATTGGCGCCTTCTATCAACTGATCCTGAGGCAGCCAAGGATGTTGTTTTAGCTGAGAAGCCAGTGATCAGTGACGATTCAAACCTGCTTGATTCATCACTTCTGGATGAACTTCTTGCAAACATTGCTACGTTATCCTCTGTGTATCACAAGCCCCCAGAAGCGTTTGTTACCCGTGTGAAGACCTCATCGCCGAGACCTGAAGATGAGGAGTATGGTAGCGAAACAGGAAATTCTGAATCAGCAGCTGATAGTGCTGCTACTGGTGCATCCCCACCACCAACTAGTTCTGGTAGTGTTCCATATGCTGCACAAAGGCAACCAGTCCCTGCACCAGCTTCGCCTGCTGCTCCAGTGCCAGACTTACTTGGTGATCTGATTGGCCTGGATAACAGTGCCATTGTCCCTGTGGATCAGCCTGCTGCTCCTGCTGGACCTCCGTTGCCTGTCTTACTACCAGCATCAACTGGTCAAGGTTTACAAATCAGTGCTCAGTTGACACGCAGGGATGGTCAAATATTTTACAGTATATTGTTTGAGAACAACACACAGGTCCCATTAGATGGGTTTATGATTCAGTTCAACAAAAATACTTTCGGTCTTGCAGCTGCTGGACCCCTTCAGGTTCCACAAATTCAACCGGGGACATCAGCAGGGACTCTCCTGCCTATGGTTACGTTCCAGAATTTGTCTCAAGGTCCTCCAAGCTCATTATTGCAAGTTGCTGTGAAAAACAATCAACAACCTGTCTGGTACTTCAACGATAAAATCCCATTGCATGTCTTCTTTACCGAGGATGGCAGAATGGAGCGTGCAAATTTTCTGGAGGTGAATTATCTTGAACCCTCTGTTTCCTCTTTGTGTTTGTGTGGGGCCCTTTGTGTCCTACTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0009506 GO:0016020 GO:0030054 GO:0044464 GO:0055044 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04142 map04142

Pfam Domains

Protein Families

Adaptin_N Alpha_adaptinC2 B2-adapt-app_C

Protein Analysis

781

Amino Acids

86.44

Weight (kDa)

4.81

Isoelectric Point (pI)

41.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Adaptin_N	PF01602	1 - 492	5.5e-161	Adaptin N terminal region
HEAT_2	PF13646	56 - 110	2e-06	HEAT repeats
Cnd1	PF12717	61 - 224	1.6e-65	non-SMC mitotic condensation complex subunit 1
Alpha_adaptinC2	PF02883	638 - 737	1.5e-11	Adaptin C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006717)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11380 AT4G11380 AT4G23460 AT4G23460
fragaria_vesca	FvH4_5g02830 FvH4_5g02830
malus_domestica	MD06G1087800.v1.1 MD14G1108600.v1.1
prunus_persica	Prupe.5G103900_v2.0.a1 Prupe.5G103900_v2.0.a1
pyrus_communis	pycom06g08390 pycom14g10320
rosa_chinensis	RchiOBHm_Chr7g0197091
rosa_laevigata	RLG00000003961
rosa_multiflora	Rmu_co8387167.1_g000001 Rmu_sc0028271.1_g000001 Rmu_ssc0000465.1_g000025
rosa_roxburghii	Rroxscaffold_3G00258680
rosa_rugosa	Rorug07G0037500 Rorug07G0037600 Rorug07G0037700
rosa_samantha	Rh7AG162500 Rh7BG164500 Rh7CG170600 Rh7DG163900
rosa_wichuraiana	Rw7G014180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1312, 1545
AccB1I	GGYRCC	1 cut(s)	1458
AccB7I	CCANNNNNTGG	2 cut(s)	676, 2015
AccII	CGCG	2 cut(s)	189, 616
AciI	CCGC	2 cut(s)	614, 1241
AclWI	GGATC	6 cut(s)	245, 275, 658, 857, 1469, 1872
AcsI	RAATTY	6 cut(s)	64, 438, 1684, 2085, 2137, 2269
AcuI	CTGAAG	6 cut(s)	95, 242, 897, 984, 1674, 2057
AcyI	GRCGYC	1 cut(s)	1459
AdeI	CACNNNGTG	1 cut(s)	525
AfaI	GTAC	4 cut(s)	694, 804, 857, 2207
AfiI	CCNNNNNNNGG	4 cut(s)	676, 1367, 2015, 2122
AflII	CTTAAG	1 cut(s)	269
AflIII	ACRYGT	1 cut(s)	1309
AgsI	TTSAA	9 cut(s)	443, 511, 1097, 1274, 1533, 2035, 2090, 2212, 2294
AhlI	ACTAGT	1 cut(s)	1736
AjnI	CCWGG	3 cut(s)	363, 930, 1836
Alw21I	GWGCWC	2 cut(s)	1269, 1945
Alw26I	GTCTC	4 cut(s)	25, 1409, 1642, 2148
AlwI	GGATC	6 cut(s)	245, 275, 658, 857, 1469, 1872
AlwNI	CAGNNNCTG	4 cut(s)	1327, 1700, 1781, 2063
AoxI	GGCC	4 cut(s)	812, 1101, 1834, 2325
ApaI	GGGCCC	1 cut(s)	2329
ApoI	RAATTY	6 cut(s)	64, 438, 1684, 2085, 2137, 2269
Asp700I	GAANNNNTTC	1 cut(s)	1278
AspLEI	GCGC	3 cut(s)	191, 430, 1461
AspS9I	GGNCC	9 cut(s)	169, 813, 1370, 1886, 2005, 2066, 2150, 2325, 2326
AsuC2I	CCSGG	1 cut(s)	2094
AsuHPI	GGTGA	4 cut(s)	679, 1244, 1835, 2293
AvaII	GGWCC	6 cut(s)	169, 1370, 1886, 2005, 2066, 2150
AxyI	CCTNAGG	1 cut(s)	1479
BaeGI	GKGCMC	1 cut(s)	2329
BanI	GGYRCC	1 cut(s)	1458
BanII	GRGCYC	2 cut(s)	1269, 2329
BauI	CACGAG	1 cut(s)	737
BbsI	GAAGAC	2 cut(s)	1640, 2227
Bbv12I	GWGCWC	2 cut(s)	1269, 1945
BccI	CCATC	8 cut(s)	470, 718, 874, 1025, 1163, 1955, 2009, 2243
BceAI	ACGGC	2 cut(s)	182, 827
BcgI	CGANNNNNNTGC	6 cut(s)	317, 351, 1286, 1320, 1773, 1807
BciT130I	CCWGG	3 cut(s)	365, 932, 1838
BclI	TGATCA	1 cut(s)	1518
BcnI	CCSGG	1 cut(s)	2094
BcoDI	GTCTC	4 cut(s)	25, 1409, 1642, 2148
BcuI	ACTAGT	1 cut(s)	1736
BfaI	CTAG	4 cut(s)	128, 558, 1181, 1737
BfmI	CTRYAG	1 cut(s)	620
BfoI	RGCGCY	1 cut(s)	1462
BfrI	CTTAAG	1 cut(s)	269
BfuAI	ACCTGC	2 cut(s)	1312, 1545
BlpI	GCTNAGC	1 cut(s)	756
Bme1390I	CCNGG	4 cut(s)	365, 932, 1838, 2094
Bme18I	GGWCC	6 cut(s)	169, 1370, 1886, 2005, 2066, 2150
BmgT120I	GGNCC	9 cut(s)	169, 813, 1370, 1886, 2005, 2066, 2150, 2325, 2326
BmiI	GGNNCC	8 cut(s)	171, 729, 1460, 2007, 2068, 2079, 2326, 2327
BmrFI	CCNGG	4 cut(s)	365, 932, 1838, 2094
BmsI	GCATC	7 cut(s)	203, 254, 538, 565, 1220, 1730, 1922
BpiI	GAAGAC	2 cut(s)	1640, 2227
BpmI	CTGGAG	2 cut(s)	1788, 2297
Bpu1102I	GCTNAGC	1 cut(s)	756
BpuEI	CTTGAG	3 cut(s)	359, 1082, 2130
BpuMI	CCSGG	1 cut(s)	2094
Bsa29I	ATCGAT	1 cut(s)	1214
BsaAI	YACGTR	1 cut(s)	1090
BsaBI	GATNNNNATC	3 cut(s)	279, 396, 1073
BsaHI	GRCGYC	1 cut(s)	1459
BsaI	GGTCTC	1 cut(s)	1642
BsaJI	CCNNGG	4 cut(s)	1206, 1488, 2093, 2244
Bsc4I	CCNNNNNNNGG	4 cut(s)	676, 1367, 2015, 2122
Bse1I	ACTGG	8 cut(s)	477, 549, 690, 1514, 1720, 1775, 1805, 1924
Bse21I	CCTNAGG	1 cut(s)	1479
Bse3DI	GCAATG	3 cut(s)	1158, 1575, 2225
Bse8I	GATNNNNATC	3 cut(s)	279, 396, 1073
BseBI	CCWGG	3 cut(s)	365, 932, 1838
BseCI	ATCGAT	1 cut(s)	1214
BseDI	CCNNGG	4 cut(s)	1206, 1488, 2093, 2244
BseJI	GATNNNNATC	3 cut(s)	279, 396, 1073
BseLI	CCNNNNNNNGG	4 cut(s)	676, 1367, 2015, 2122
BseMI	GCAATG	3 cut(s)	1158, 1575, 2225
BseMII	CTCAG	7 cut(s)	330, 747, 753, 1424, 1470, 1497, 1958
BseNI	ACTGG	8 cut(s)	477, 549, 690, 1514, 1720, 1775, 1805, 1924
BseRI	GAGGAG	2 cut(s)	720, 1676
BseSI	GKGCMC	1 cut(s)	2329
BsgI	GTGCAG	3 cut(s)	1290, 1746, 1767
Bsh1236I	CGCG	2 cut(s)	189, 616
BshFI	GGCC	4 cut(s)	814, 1103, 1836, 2327
BshNI	GGYRCC	1 cut(s)	1458
BshVI	ATCGAT	1 cut(s)	1214
BsiHKAI	GWGCWC	2 cut(s)	1269, 1945
BsiSI	CCGG	1 cut(s)	2093
BslFI	GGGAC	6 cut(s)	543, 1763, 1841, 1991, 2110, 2122
BslI	CCNNNNNNNGG	4 cut(s)	676, 1367, 2015, 2122
BsmAI	GTCTC	4 cut(s)	25, 1409, 1642, 2148
BsmFI	GGGAC	6 cut(s)	543, 1763, 1841, 1991, 2110, 2122
BsmI	GAATGC	2 cut(s)	216, 521
BsnI	GGCC	4 cut(s)	814, 1103, 1836, 2327
Bso31I	GGTCTC	1 cut(s)	1642
Bsp120I	GGGCCC	1 cut(s)	2325
Bsp1286I	GDGCHC	3 cut(s)	1269, 1945, 2329
Bsp1720I	GCTNAGC	1 cut(s)	756
BspACI	CCGC	2 cut(s)	614, 1241
BspANI	GGCC	4 cut(s)	814, 1103, 1836, 2327
BspCNI	CTCAG	7 cut(s)	331, 748, 754, 1425, 1471, 1498, 1957
BspDI	ATCGAT	1 cut(s)	1214
BspFNI	CGCG	2 cut(s)	189, 616
BspHI	TCATGA	1 cut(s)	829
BspLI	GGNNCC	8 cut(s)	171, 729, 1460, 2007, 2068, 2079, 2326, 2327
BspMI	ACCTGC	2 cut(s)	1312, 1545
BspPI	GGATC	6 cut(s)	245, 275, 658, 857, 1469, 1872
BspT107I	GGYRCC	1 cut(s)	1458
BspTI	CTTAAG	1 cut(s)	269
BspTNI	GGTCTC	1 cut(s)	1642
BsrDI	GCAATG	3 cut(s)	1158, 1575, 2225
BsrI	ACTGG	8 cut(s)	477, 549, 690, 1514, 1720, 1775, 1805, 1924
BssECI	CCNNGG	4 cut(s)	1206, 1488, 2093, 2244
BssNI	GRCGYC	1 cut(s)	1459
BssSI	CACGAG	1 cut(s)	737
BssT1I	CCWWGG	2 cut(s)	1206, 1488
Bst2BI	CACGAG	1 cut(s)	737
Bst2UI	CCWGG	3 cut(s)	365, 932, 1838
Bst4CI	ACNGT	9 cut(s)	7, 635, 1044, 1054, 1339, 1411, 1847, 1979, 2343
BstACI	GRCGYC	1 cut(s)	1459
BstAFI	CTTAAG	1 cut(s)	269
BstAPI	GCANNNNNTGC	3 cut(s)	137, 575, 1577
BstBAI	YACGTR	1 cut(s)	1090
BstC8I	GCNNGC	8 cut(s)	53, 119, 432, 627, 909, 1797, 1872, 2265
BstDEI	CTNAG	7 cut(s)	339, 756, 762, 1433, 1479, 1506, 1944
BstFNI	CGCG	2 cut(s)	189, 616
BstH2I	RGCGCY	1 cut(s)	1462
BstHHI	GCGC	3 cut(s)	191, 430, 1461
BstMAI	GTCTC	4 cut(s)	25, 1409, 1642, 2148
BstNI	CCWGG	3 cut(s)	365, 932, 1838
BstNSI	RCATGY	4 cut(s)	55, 629, 1313, 2234
BstSCI	CCNGG	4 cut(s)	363, 930, 1836, 2092
BstSFI	CTRYAG	1 cut(s)	620
BstSLI	GKGCMC	1 cut(s)	2329
BstSNI	TACGTA	1 cut(s)	1090
BstUI	CGCG	2 cut(s)	189, 616
BstV2I	GAAGAC	2 cut(s)	1640, 2227
Bsu15I	ATCGAT	1 cut(s)	1214
Bsu36I	CCTNAGG	1 cut(s)	1479
BsuRI	GGCC	4 cut(s)	814, 1103, 1836, 2327
BsuTUI	ATCGAT	1 cut(s)	1214
BtgZI	GCGATG	1 cut(s)	1626
BtsIMutI	CAGTG	5 cut(s)	1521, 1528, 1812, 1852, 1945
BveI	ACCTGC	2 cut(s)	1312, 1545
Cac8I	GCNNGC	8 cut(s)	53, 119, 432, 627, 909, 1797, 1872, 2265
CaiI	CAGNNNCTG	4 cut(s)	1327, 1700, 1781, 2063
CciI	TCATGA	1 cut(s)	829
CfoI	GCGC	3 cut(s)	191, 430, 1461
Cfr13I	GGNCC	9 cut(s)	169, 813, 1370, 1886, 2005, 2066, 2150, 2325, 2326
ClaI	ATCGAT	1 cut(s)	1214
CsiI	ACCWGGT	1 cut(s)	930
Csp6I	GTAC	4 cut(s)	693, 803, 856, 2206
CspCI	CAANNNNNGTGG	4 cut(s)	402, 437, 805, 840
CviAII	CATG	5 cut(s)	52, 626, 830, 1310, 2231
CviQI	GTAC	4 cut(s)	693, 803, 856, 2206
DdeI	CTNAG	7 cut(s)	339, 756, 762, 1433, 1479, 1506, 1944
DinI	GGCGCC	1 cut(s)	1460
DraI	TTTAAA	1 cut(s)	949
DraIII	CACNNNGTG	1 cut(s)	525
Ecl136II	GAGCTC	1 cut(s)	1267
Eco105I	TACGTA	1 cut(s)	1090
Eco130I	CCWWGG	2 cut(s)	1206, 1488
Eco24I	GRGCYC	2 cut(s)	1269, 2329
Eco31I	GGTCTC	1 cut(s)	1642
Eco32I	GATATC	2 cut(s)	1123, 1136
Eco47I	GGWCC	6 cut(s)	169, 1370, 1886, 2005, 2066, 2150
Eco53kI	GAGCTC	1 cut(s)	1267
Eco57I	CTGAAG	6 cut(s)	95, 242, 897, 984, 1674, 2057
Eco81I	CCTNAGG	1 cut(s)	1479
EcoICRI	GAGCTC	1 cut(s)	1267
EcoO109I	RGGNCCY	5 cut(s)	169, 2005, 2150, 2325, 2326
EcoRII	CCWGG	3 cut(s)	363, 930, 1836
EcoRV	GATATC	2 cut(s)	1123, 1136
EcoT14I	CCWWGG	2 cut(s)	1206, 1488
EcoT22I	ATGCAT	1 cut(s)	218
EcoT38I	GRGCYC	2 cut(s)	1269, 2329
EgeI	GGCGCC	1 cut(s)	1460
EheI	GGCGCC	1 cut(s)	1460
ErhI	CCWWGG	2 cut(s)	1206, 1488
FaeI	CATG	5 cut(s)	55, 629, 833, 1313, 2234
FalI	AAGNNNNNCTT	2 cut(s)	830, 862
FaqI	GGGAC	6 cut(s)	543, 1763, 1841, 1991, 2110, 2122
FatI	CATG	5 cut(s)	51, 625, 829, 1309, 2230
FauI	CCCGC	1 cut(s)	621
FauNDI	CATATG	3 cut(s)	286, 308, 1756
FbaI	TGATCA	1 cut(s)	1518
FriOI	GRGCYC	2 cut(s)	1269, 2329
FspBI	CTAG	4 cut(s)	128, 558, 1181, 1737
GlaI	GCGC	3 cut(s)	190, 429, 1460
GsuI	CTGGAG	2 cut(s)	1788, 2297
HaeII	RGCGCY	1 cut(s)	1462
HaeIII	GGCC	4 cut(s)	814, 1103, 1836, 2327
HapII	CCGG	1 cut(s)	2093
HhaI	GCGC	3 cut(s)	191, 430, 1461
Hin1I	GRCGYC	1 cut(s)	1459
Hin1II	CATG	5 cut(s)	55, 629, 833, 1313, 2234
Hin6I	GCGC	3 cut(s)	189, 428, 1459
HinP1I	GCGC	3 cut(s)	189, 428, 1459
HincII	GTYRAC	1 cut(s)	1950
HindII	GTYRAC	1 cut(s)	1950
HindIII	AAGCTT	2 cut(s)	905, 1276
HpaII	CCGG	1 cut(s)	2093
HphI	GGTGA	4 cut(s)	679, 1244, 1835, 2293
Hpy166II	GTNNAC	2 cut(s)	1931, 1950
Hpy8I	GTNNAC	2 cut(s)	1931, 1950
Hpy99I	CGWCG	1 cut(s)	28
HpyAV	CCTTC	5 cut(s)	7, 266, 1361, 1472, 2081
HpyCH4III	ACNGT	9 cut(s)	7, 635, 1044, 1054, 1339, 1411, 1847, 1979, 2343
HpyCH4IV	ACGT	3 cut(s)	1089, 1583, 2129
HpyF3I	CTNAG	7 cut(s)	339, 756, 762, 1433, 1479, 1506, 1944
HpySE526I	ACGT	3 cut(s)	1089, 1583, 2129
Hsp92I	GRCGYC	1 cut(s)	1459
Hsp92II	CATG	5 cut(s)	55, 629, 833, 1313, 2234
HspAI	GCGC	3 cut(s)	189, 428, 1459
KasI	GGCGCC	1 cut(s)	1458
Ksp22I	TGATCA	1 cut(s)	1518
LmnI	GCTCC	7 cut(s)	70, 501, 733, 1272, 1807, 1882, 2260
LweI	GCATC	7 cut(s)	203, 254, 538, 565, 1220, 1730, 1922
MabI	ACCWGGT	1 cut(s)	930
MaeI	CTAG	4 cut(s)	128, 558, 1181, 1737
MaeII	ACGT	3 cut(s)	1089, 1583, 2129
MaeIII	GTNAC	6 cut(s)	479, 607, 739, 1523, 1621, 2125
MboII	GAAGA	6 cut(s)	88, 1143, 1310, 1645, 1667, 2227
MfeI	CAATTG	1 cut(s)	1316
MhlI	GDGCHC	3 cut(s)	1269, 1945, 2329
Mly113I	GGCGCC	1 cut(s)	1459
MlyI	GAGTC	1 cut(s)	2104
MmeI	TCCRAC	1 cut(s)	694
Mph1103I	ATGCAT	1 cut(s)	218
MroXI	GAANNNNTTC	1 cut(s)	1278
MseI	TTAA	6 cut(s)	270, 782, 837, 948, 1071, 1353
MspA1I	CMGCKG	5 cut(s)	572, 653, 1037, 1700, 2060
MspCI	CTTAAG	1 cut(s)	269
MspI	CCGG	1 cut(s)	2093
MspR9I	CCNGG	4 cut(s)	365, 932, 1838, 2094
MunI	CAATTG	1 cut(s)	1316
Mva1269I	GAATGC	2 cut(s)	216, 521
MvaI	CCWGG	3 cut(s)	365, 932, 1838
MvnI	CGCG	2 cut(s)	189, 616
NarI	GGCGCC	1 cut(s)	1459
NciI	CCSGG	1 cut(s)	2094
NdeI	CATATG	3 cut(s)	286, 308, 1756
NlaIII	CATG	5 cut(s)	55, 629, 833, 1313, 2234
NlaIV	GGNNCC	8 cut(s)	171, 729, 1460, 2007, 2068, 2079, 2326, 2327
NmeAIII	GCCGAG	1 cut(s)	1671
NmuCI	GTSAC	3 cut(s)	479, 739, 1523
NsiI	ATGCAT	1 cut(s)	218
NspI	RCATGY	4 cut(s)	55, 629, 1313, 2234
PaeI	GCATGC	2 cut(s)	55, 629
PagI	TCATGA	1 cut(s)	829
PciI	ACATGT	1 cut(s)	1309
PctI	GAATGC	2 cut(s)	216, 521
PdmI	GAANNNNTTC	1 cut(s)	1278
PfeI	GAWTC	9 cut(s)	161, 184, 368, 1151, 1384, 1529, 1544, 1691, 2026
PflMI	CCANNNNNTGG	2 cut(s)	676, 2015
PfoI	TCCNGGA	1 cut(s)	363
PleI	GAGTC	1 cut(s)	2104
PluTI	GGCGCC	1 cut(s)	1462
PpsI	GAGTC	1 cut(s)	2104
Ppu21I	YACGTR	1 cut(s)	1090
PpuMI	RGGWCCY	3 cut(s)	169, 2005, 2150
PscI	ACATGT	1 cut(s)	1309
Psp124BI	GAGCTC	1 cut(s)	1269
Psp5II	RGGWCCY	3 cut(s)	169, 2005, 2150
Psp6I	CCWGG	3 cut(s)	363, 930, 1836
PspGI	CCWGG	3 cut(s)	363, 930, 1836
PspN4I	GGNNCC	8 cut(s)	171, 729, 1460, 2007, 2068, 2079, 2326, 2327
PspOMI	GGGCCC	1 cut(s)	2325
PspPI	GGNCC	9 cut(s)	169, 813, 1370, 1886, 2005, 2066, 2150, 2325, 2326
PspPPI	RGGWCCY	3 cut(s)	169, 2005, 2150
PstNI	CAGNNNCTG	4 cut(s)	1327, 1700, 1781, 2063
PvuII	CAGCTG	5 cut(s)	572, 653, 1037, 1700, 2060
RsaI	GTAC	4 cut(s)	694, 804, 857, 2207
RsaNI	GTAC	4 cut(s)	693, 803, 856, 2206
SacI	GAGCTC	1 cut(s)	1269
SaqAI	TTAA	6 cut(s)	270, 782, 837, 948, 1071, 1353
Sau96I	GGNCC	9 cut(s)	169, 813, 1370, 1886, 2005, 2066, 2150, 2325, 2326
SchI	GAGTC	1 cut(s)	2104
ScrFI	CCNGG	4 cut(s)	365, 932, 1838, 2094
SduI	GDGCHC	3 cut(s)	1269, 1945, 2329
SexAI	ACCWGGT	1 cut(s)	930
SfaNI	GCATC	7 cut(s)	203, 254, 538, 565, 1220, 1730, 1922
SfcI	CTRYAG	1 cut(s)	620
SfoI	GGCGCC	1 cut(s)	1460
SinI	GGWCC	6 cut(s)	169, 1370, 1886, 2005, 2066, 2150
SmlI	CTYRAG	4 cut(s)	269, 374, 1061, 2145
SmoI	CTYRAG	4 cut(s)	269, 374, 1061, 2145
SnaBI	TACGTA	1 cut(s)	1090
SpeI	ACTAGT	1 cut(s)	1736
SphI	GCATGC	2 cut(s)	55, 629
SsiI	CCGC	2 cut(s)	614, 1241
SspDI	GGCGCC	1 cut(s)	1458
SspI	AATATT	1 cut(s)	1971
SspMI	CTAG	4 cut(s)	128, 558, 1181, 1737
SstI	GAGCTC	1 cut(s)	1269
StyD4I	CCNGG	4 cut(s)	363, 930, 1836, 2092
StyI	CCWWGG	2 cut(s)	1206, 1488
TaaI	ACNGT	9 cut(s)	7, 635, 1044, 1054, 1339, 1411, 1847, 1979, 2343
TaiI	ACGT	3 cut(s)	1092, 1586, 2132
TaqI	TCGA	2 cut(s)	919, 1214
TaqII	GACCGA	1 cut(s)	2039
TatI	WGTACW	2 cut(s)	802, 855
TfiI	GAWTC	9 cut(s)	161, 184, 368, 1151, 1384, 1529, 1544, 1691, 2026
Tru1I	TTAA	6 cut(s)	270, 782, 837, 948, 1071, 1353
Tru9I	TTAA	6 cut(s)	270, 782, 837, 948, 1071, 1353
TscAI	CASTG	5 cut(s)	1521, 1528, 1812, 1852, 1945
TseFI	GTSAC	3 cut(s)	479, 739, 1523
Tsp45I	GTSAC	3 cut(s)	479, 739, 1523
TspDTI	ATGAA	6 cut(s)	528, 846, 1164, 1209, 1536, 1575
TspGWI	ACGGA	3 cut(s)	50, 986, 1881
TspRI	CASTG	5 cut(s)	1521, 1528, 1812, 1852, 1945
Van91I	CCANNNNNTGG	2 cut(s)	676, 2015
Vha464I	CTTAAG	1 cut(s)	269
VpaK11BI	GGWCC	6 cut(s)	169, 1370, 1886, 2005, 2066, 2150
XapI	RAATTY	6 cut(s)	64, 438, 1684, 2085, 2137, 2269
XbaI	TCTAGA	1 cut(s)	557
XceI	RCATGY	4 cut(s)	55, 629, 1313, 2234
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1858
XmnI	GAANNNNTTC	1 cut(s)	1278
XspI	CTAG	4 cut(s)	128, 558, 1181, 1737
Zsp2I	ATGCAT	1 cut(s)	218

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.