AT4G14000

Histidine protein methyltransferase 1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0006354
Physical Location & Seq
Forward (+)
8090793 .. 8093601
2809 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G14000.1

Sequence Viewer

Length: 873 bp
ATGGCGACGAAACCGACGTTTCAGCTGTTTTCTTCTTCTCAAGGTTCTGGTCTAGGTTTAGGGTTCCTTGATTCATCAGAGCCAGCTCTTCCTCCACCTCCTCCTCCTGTTGAAGTATTATCCTTCGAGGTGTCTTCCTCCACTGATTTCGAAGTGGATAAATTGACTATCGGCGAGATCACTCTTTTGAAGGGTCGTGTGAGCACTAAAGAGGTTTTTGGATTGCCTAATTCAGATTTGGTTCCTGGAGTCTATGAAGGCGGGCTTAAGCTTTGGGAAGGATCGATTGATCTTGTTAAAGCTCTTGAGAAAGAATCACAAACCGGAAACTTATCATTTTCCGGAAAGCGGGTTCTCGAGCTTGGATGTGGTCATGCACTTCCAGGAATCTATGCGTGTCTCAAGGGTTCAGATGCTGTTCATTTCCAGGACTTCAATGCTGAGGTTCTTCGATGTCTCACCATTCCGAATCTGAATGCTAATCTGTCTGAGAAGTCTTCCTCTGTCTCAGTAAGTGAAACAGAAGTACGCTTCTTTGCTGGTGAGTGGAGTGAAGTTCATCAGGTTCTTCCACTAGTTAATAGTGATGGTGAGACTAATAAGAAGGGTGGTTATGACATCATTCTAATGGCTGAGACGATATATTCCATCTCCGCTCAGAAAAGTCAATATGAATTGATTAAAAGGTGTCTGGCGTATCCTGATGGAGCAGTGTATATGGCTGCAAAGAAGTACTATTTCGGGGTCGGTGGAGGGACAAGGCAATTCTTGTCTATGATAGAGAAAGACGGTGCTCTTGCTTCAACGTTGGTGTCTCAAGTCACAGATGGTTCCTCAAATGTCAGAGAGGTATGGAAGCTTTCGTACAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_16

Protein Analysis

290

Amino Acids

31.3

Weight (kDa)

5.07

Isoelectric Point (pI)

38.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_16 PF10294 88 - 262 2e-07 Lysine methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 656
AccIII TCCGGA 1 cut(s) 341
AciI CCGC 3 cut(s) 261, 349, 654
AclI AACGTT 1 cut(s) 806
AclWI GGATC 1 cut(s) 289
AfaI GTAC 3 cut(s) 528, 734, 866
AfiI CCNNNNNNNGG 1 cut(s) 348
AflII CTTAAG 1 cut(s) 266
AgsI TTSAA 4 cut(s) 113, 190, 436, 804
AhlI ACTAGT 1 cut(s) 574
AjnI CCWGG 3 cut(s) 244, 382, 426
AloI GAACNNNNNNTCC 2 cut(s) 336, 368
AluBI AGCT 6 cut(s) 25, 86, 271, 302, 361, 859
AluI AGCT 6 cut(s) 25, 86, 271, 302, 361, 859
Alw21I GWGCWC 2 cut(s) 206, 796
Alw26I GTCTC 6 cut(s) 404, 461, 511, 587, 629, 819
AlwI GGATC 1 cut(s) 289
AlwNI CAGNNNCTG 1 cut(s) 416
Ama87I CYCGRG 1 cut(s) 356
Aor13HI TCCGGA 1 cut(s) 341
ApeKI GCWGC 1 cut(s) 722
AsuHPI GGTGA 3 cut(s) 451, 554, 602
AsuII TTCGAA 1 cut(s) 150
AvaI CYCGRG 1 cut(s) 356
BarI GAAGNNNNNNTAC 1 cut(s) 848
BbsI GAAGAC 2 cut(s) 126, 489
Bbv12I GWGCWC 2 cut(s) 206, 796
BbvCI CCTCAGC 1 cut(s) 441
BbvI GCAGC 1 cut(s) 709
BccI CCATC 4 cut(s) 581, 656, 698, 821
BciT130I CCWGG 3 cut(s) 246, 384, 428
BciVI GTATCC 1 cut(s) 708
BcoDI GTCTC 6 cut(s) 404, 461, 511, 587, 629, 819
BcuI ACTAGT 1 cut(s) 574
BfaI CTAG 2 cut(s) 53, 575
BfrI CTTAAG 1 cut(s) 266
BfuI GTATCC 1 cut(s) 708
BisI GCNGC 1 cut(s) 723
BlsI GCNGC 1 cut(s) 724
BmcAI AGTACT 1 cut(s) 734
Bme1390I CCNGG 3 cut(s) 246, 384, 428
BmeT110I CYCGRG 1 cut(s) 356
BmiI GGNNCC 3 cut(s) 65, 243, 832
BmrFI CCNGG 3 cut(s) 246, 384, 428
BmsI GCATC 1 cut(s) 403
BpiI GAAGAC 2 cut(s) 126, 489
BpmI CTGGAG 1 cut(s) 267
Bpu10I CCTNAGC 1 cut(s) 441
Bpu14I TTCGAA 1 cut(s) 150
BpuEI CTTGAG 4 cut(s) 24, 326, 386, 801
Bsa29I ATCGAT 1 cut(s) 284
BsaWI WCCGGW 2 cut(s) 323, 341
Bsc4I CCNNNNNNNGG 1 cut(s) 348
BseAI TCCGGA 1 cut(s) 341
BseBI CCWGG 3 cut(s) 246, 384, 428
BseCI ATCGAT 1 cut(s) 284
BseGI GGATG 1 cut(s) 371
BseLI CCNNNNNNNGG 1 cut(s) 348
BseMII CTCAG 5 cut(s) 432, 480, 522, 624, 671
BseRI GAGGAG 2 cut(s) 90, 93
BseXI GCAGC 1 cut(s) 709
BshVI ATCGAT 1 cut(s) 284
BsiHKAI GWGCWC 2 cut(s) 206, 796
BsiHKCI CYCGRG 1 cut(s) 356
BsiSI CCGG 2 cut(s) 324, 342
BslFI GGGAC 1 cut(s) 769
BslI CCNNNNNNNGG 1 cut(s) 348
BsmAI GTCTC 6 cut(s) 404, 461, 511, 587, 629, 819
BsmBI CGTCTC 1 cut(s) 629
BsmFI GGGAC 1 cut(s) 769
BsmI GAATGC 1 cut(s) 481
BsoBI CYCGRG 1 cut(s) 356
Bsp119I TTCGAA 1 cut(s) 150
Bsp1286I GDGCHC 2 cut(s) 206, 796
Bsp13I TCCGGA 1 cut(s) 341
Bsp143I GATC 3 cut(s) 177, 281, 289
BspACI CCGC 3 cut(s) 261, 349, 654
BspCNI CTCAG 5 cut(s) 433, 481, 521, 625, 670
BspDI ATCGAT 1 cut(s) 284
BspEI TCCGGA 1 cut(s) 341
BspLI GGNNCC 3 cut(s) 65, 243, 832
BspPI GGATC 1 cut(s) 289
BspQI GCTCTTC 1 cut(s) 93
BspT104I TTCGAA 1 cut(s) 150
BspTI CTTAAG 1 cut(s) 266
BsrBI CCGCTC 1 cut(s) 656
BssMI GATC 3 cut(s) 177, 281, 289
Bst2UI CCWGG 3 cut(s) 246, 384, 428
Bst4CI ACNGT 1 cut(s) 791
Bst6I CTCTTC 1 cut(s) 93
BstAFI CTTAAG 1 cut(s) 266
BstBI TTCGAA 1 cut(s) 150
BstC8I GCNNGC 2 cut(s) 84, 263
BstDEI CTNAG 5 cut(s) 441, 489, 508, 633, 657
BstF5I GGATG 1 cut(s) 371
BstKTI GATC 3 cut(s) 180, 284, 292
BstMAI GTCTC 6 cut(s) 404, 461, 511, 587, 629, 819
BstMBI GATC 3 cut(s) 177, 281, 289
BstNI CCWGG 3 cut(s) 246, 384, 428
BstSCI CCNGG 3 cut(s) 244, 382, 426
BstV1I GCAGC 1 cut(s) 709
BstV2I GAAGAC 2 cut(s) 126, 489
Bsu15I ATCGAT 1 cut(s) 284
BsuI GTATCC 1 cut(s) 708
BsuTUI ATCGAT 1 cut(s) 284
BtsCI GGATG 1 cut(s) 371
BtsI GCAGTG 1 cut(s) 717
BtsIMutI CAGTG 2 cut(s) 141, 717
Cac8I GCNNGC 2 cut(s) 84, 263
CaiI CAGNNNCTG 1 cut(s) 416
ClaI ATCGAT 1 cut(s) 284
Csp6I GTAC 3 cut(s) 527, 733, 865
CviAII CATG 1 cut(s) 374
CviQI GTAC 3 cut(s) 527, 733, 865
DdeI CTNAG 5 cut(s) 441, 489, 508, 633, 657
DpnI GATC 3 cut(s) 179, 283, 291
DpnII GATC 3 cut(s) 177, 281, 289
Eam1104I CTCTTC 1 cut(s) 93
EarI CTCTTC 1 cut(s) 93
Eco88I CYCGRG 1 cut(s) 356
EcoRII CCWGG 3 cut(s) 244, 382, 426
Esp3I CGTCTC 1 cut(s) 629
FaeI CATG 1 cut(s) 377
FalI AAGNNNNNCTT 2 cut(s) 249, 281
FaqI GGGAC 1 cut(s) 769
FatI CATG 1 cut(s) 373
FauI CCCGC 2 cut(s) 254, 342
Fnu4HI GCNGC 1 cut(s) 723
FokI GGATG 1 cut(s) 378
Fsp4HI GCNGC 1 cut(s) 723
FspBI CTAG 2 cut(s) 53, 575
GluI GCNGC 1 cut(s) 723
GsuI CTGGAG 1 cut(s) 267
HapII CCGG 2 cut(s) 324, 342
Hin1II CATG 1 cut(s) 377
HindIII AAGCTT 2 cut(s) 269, 857
HinfI GANTC 5 cut(s) 71, 249, 314, 387, 469
HpaII CCGG 2 cut(s) 324, 342
HphI GGTGA 3 cut(s) 451, 554, 602
Hpy188I TCNGA 8 cut(s) 79, 235, 412, 468, 474, 490, 660, 845
Hpy188III TCNNGA 4 cut(s) 305, 342, 356, 701
Hpy99I CGWCG 2 cut(s) 10, 19
HpyAV CCTTC 5 cut(s) 133, 184, 251, 272, 598
HpyCH4III ACNGT 1 cut(s) 791
HpyCH4IV ACGT 2 cut(s) 17, 806
HpyCH4V TGCA 2 cut(s) 377, 725
HpyF3I CTNAG 5 cut(s) 441, 489, 508, 633, 657
HpySE526I ACGT 2 cut(s) 17, 806
Hsp92II CATG 1 cut(s) 377
Kpn2I TCCGGA 1 cut(s) 341
Kzo9I GATC 3 cut(s) 177, 281, 289
LguI GCTCTTC 1 cut(s) 93
LmnI GCTCC 1 cut(s) 707
Lsp1109I GCAGC 1 cut(s) 709
LweI GCATC 1 cut(s) 403
MaeI CTAG 2 cut(s) 53, 575
MaeII ACGT 2 cut(s) 17, 806
MaeIII GTNAC 1 cut(s) 820
MalI GATC 3 cut(s) 179, 283, 291
MbiI CCGCTC 1 cut(s) 656
MboI GATC 3 cut(s) 177, 281, 289
MboII GAAGA 7 cut(s) 24, 27, 80, 126, 440, 489, 560
MhlI GDGCHC 2 cut(s) 206, 796
MluCI AATT 4 cut(s) 161, 229, 674, 764
MlyI GAGTC 1 cut(s) 258
MroI TCCGGA 1 cut(s) 341
MseI TTAA 4 cut(s) 267, 297, 579, 681
MslI CAYNNNNRTG 1 cut(s) 626
MspA1I CMGCKG 1 cut(s) 25
MspCI CTTAAG 1 cut(s) 266
MspI CCGG 2 cut(s) 324, 342
MspR9I CCNGG 3 cut(s) 246, 384, 428
Mva1269I GAATGC 1 cut(s) 481
MvaI CCWGG 3 cut(s) 246, 384, 428
NdeII GATC 3 cut(s) 177, 281, 289
NlaIII CATG 1 cut(s) 377
NlaIV GGNNCC 3 cut(s) 65, 243, 832
NmuCI GTSAC 1 cut(s) 820
NspV TTCGAA 1 cut(s) 150
PaeR7I CTCGAG 1 cut(s) 356
PciSI GCTCTTC 1 cut(s) 93
PcsI WCGNNNNNNNCGW 1 cut(s) 14
PctI GAATGC 1 cut(s) 481
PfeI GAWTC 4 cut(s) 71, 314, 387, 469
PfoI TCCNGGA 3 cut(s) 244, 382, 426
PkrI GCNGC 1 cut(s) 724
PleI GAGTC 1 cut(s) 257
PpsI GAGTC 1 cut(s) 257
Psp1406I AACGTT 1 cut(s) 806
Psp6I CCWGG 3 cut(s) 244, 382, 426
PspGI CCWGG 3 cut(s) 244, 382, 426
PspN4I GGNNCC 3 cut(s) 65, 243, 832
PstNI CAGNNNCTG 1 cut(s) 416
PvuII CAGCTG 1 cut(s) 25
RsaI GTAC 3 cut(s) 528, 734, 866
RsaNI GTAC 3 cut(s) 527, 733, 865
RseI CAYNNNNRTG 1 cut(s) 626
SapI GCTCTTC 1 cut(s) 93
SaqAI TTAA 4 cut(s) 267, 297, 579, 681
SatI GCNGC 1 cut(s) 723
Sau3AI GATC 3 cut(s) 177, 281, 289
ScaI AGTACT 1 cut(s) 734
SchI GAGTC 1 cut(s) 258
ScrFI CCNGG 3 cut(s) 246, 384, 428
SduI GDGCHC 2 cut(s) 206, 796
SfaNI GCATC 1 cut(s) 403
Sfr274I CTCGAG 1 cut(s) 356
SfuI TTCGAA 1 cut(s) 150
SlaI CTCGAG 1 cut(s) 356
SmiMI CAYNNNNRTG 1 cut(s) 626
SmlI CTYRAG 6 cut(s) 39, 266, 305, 356, 401, 816
SmoI CTYRAG 6 cut(s) 39, 266, 305, 356, 401, 816
SpeI ACTAGT 1 cut(s) 574
Sse9I AATT 4 cut(s) 161, 229, 674, 764
SsiI CCGC 3 cut(s) 261, 349, 654
SspMI CTAG 2 cut(s) 53, 575
StyD4I CCNGG 3 cut(s) 244, 382, 426
TaaI ACNGT 1 cut(s) 791
TaiI ACGT 2 cut(s) 20, 809
TaqI TCGA 5 cut(s) 126, 150, 284, 357, 451
TasI AATT 4 cut(s) 161, 229, 674, 764
TatI WGTACW 1 cut(s) 732
TfiI GAWTC 4 cut(s) 71, 314, 387, 469
Tru1I TTAA 4 cut(s) 267, 297, 579, 681
Tru9I TTAA 4 cut(s) 267, 297, 579, 681
TscAI CASTG 2 cut(s) 148, 717
TseFI GTSAC 1 cut(s) 820
TseI GCWGC 1 cut(s) 722
Tsp45I GTSAC 1 cut(s) 820
TspDTI ATGAA 5 cut(s) 63, 270, 410, 548, 687
TspRI CASTG 2 cut(s) 148, 717
Vha464I CTTAAG 1 cut(s) 266
XhoI CTCGAG 1 cut(s) 356
XspI CTAG 2 cut(s) 53, 575
ZrmI AGTACT 1 cut(s) 734
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.