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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G17000 AT4G17000 AT4G17000 |
| fragaria_vesca | FvH4_2g02560 FvH4_2g02560 FvH4_2g02560 FvH4_2g02560 FvH4_2g02560 |
| malus_domestica | MD05G1112300.v1.1 MD10G1114900.v1.1 |
| prunus_persica | Prupe.8G156900_v2.0.a1 Prupe.8G157000_v2.0.a1 |
| pyrus_communis | pycom02g05590 pycom05g07390 pycom05g10780 pycom07g10710 pycom12g10280 pycom16g18860 |
| rosa_chinensis | RchiOBHm_Chr6g0246371 RchiOBHm_Chr6g0246451 RchiOBHm_Chr6g0246631 RchiOBHm_Chr6g0246641 |
| rosa_laevigata | RLG00000000929 RLG00000015260 |
| rosa_multiflora | Rmu_sc0001066.1_g000005 Rmu_sc0008965.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00214640 |
| rosa_rugosa | Rorug05G0520500 |
| rosa_samantha | Rh6AG034800 Rh6AG035100 Rh6BG029900 Rh6CG030300 Rh6DG029200 |
| rosa_wichuraiana | Rw6G002820 Rw6G002980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 836 |
| Acc65I | GGTACC | 1 cut(s) | 1484 |
| AccB1I | GGYRCC | 1 cut(s) | 1484 |
| AccI | GTMKAC | 2 cut(s) | 81, 1499 |
| AccII | CGCG | 2 cut(s) | 1160, 1850 |
| AciI | CCGC | 5 cut(s) | 90, 802, 1160, 1848, 1850 |
| AclWI | GGATC | 5 cut(s) | 272, 869, 887, 1031, 1885 |
| AcsI | RAATTY | 5 cut(s) | 167, 197, 1330, 1413, 1557 |
| AcuI | CTGAAG | 4 cut(s) | 129, 647, 999, 1320 |
| AcvI | CACGTG | 1 cut(s) | 323 |
| AfaI | GTAC | 5 cut(s) | 534, 844, 1486, 1597, 1999 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 362, 1626 |
| AflIII | ACRYGT | 1 cut(s) | 322 |
| AgsI | TTSAA | 9 cut(s) | 602, 850, 901, 968, 1100, 1241, 1387, 1462, 1749 |
| AhlI | ACTAGT | 1 cut(s) | 941 |
| AjnI | CCWGG | 1 cut(s) | 1023 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1715, 1747 |
| Alw21I | GWGCWC | 1 cut(s) | 960 |
| Alw26I | GTCTC | 3 cut(s) | 50, 1220, 1777 |
| AlwI | GGATC | 5 cut(s) | 272, 869, 887, 1031, 1885 |
| AoxI | GGCC | 1 cut(s) | 1026 |
| ApeKI | GCWGC | 2 cut(s) | 218, 518 |
| ApoI | RAATTY | 5 cut(s) | 167, 197, 1330, 1413, 1557 |
| Asp718I | GGTACC | 1 cut(s) | 1484 |
| AspS9I | GGNCC | 2 cut(s) | 1652, 1961 |
| AsuC2I | CCSGG | 1 cut(s) | 1735 |
| AsuHPI | GGTGA | 6 cut(s) | 79, 631, 667, 787, 1207, 1652 |
| AsuII | TTCGAA | 1 cut(s) | 244 |
| AvaII | GGWCC | 2 cut(s) | 1652, 1961 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1476, 1509 |
| BanI | GGYRCC | 1 cut(s) | 1484 |
| BanII | GRGCYC | 2 cut(s) | 515, 960 |
| BauI | CACGAG | 1 cut(s) | 768 |
| BbrPI | CACGTG | 1 cut(s) | 323 |
| BbsI | GAAGAC | 5 cut(s) | 51, 233, 760, 1248, 1617 |
| Bbv12I | GWGCWC | 1 cut(s) | 960 |
| BbvI | GCAGC | 2 cut(s) | 230, 530 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1104, 1138 |
| BciT130I | CCWGG | 1 cut(s) | 1025 |
| BclI | TGATCA | 2 cut(s) | 151, 820 |
| BcnI | CCSGG | 1 cut(s) | 1735 |
| BcoDI | GTCTC | 3 cut(s) | 50, 1220, 1777 |
| BcuI | ACTAGT | 1 cut(s) | 941 |
| BfaI | CTAG | 5 cut(s) | 138, 222, 750, 942, 1205 |
| BfmI | CTRYAG | 1 cut(s) | 1687 |
| BglII | AGATCT | 1 cut(s) | 632 |
| BisI | GCNGC | 3 cut(s) | 219, 519, 1161 |
| BlsI | GCNGC | 3 cut(s) | 220, 520, 1162 |
| BmcAI | AGTACT | 1 cut(s) | 844 |
| Bme1390I | CCNGG | 2 cut(s) | 1025, 1735 |
| Bme18I | GGWCC | 2 cut(s) | 1652, 1961 |
| BmgT120I | GGNCC | 2 cut(s) | 1652, 1961 |
| BmiI | GGNNCC | 5 cut(s) | 300, 1486, 1634, 1653, 1962 |
| BmrFI | CCNGG | 2 cut(s) | 1025, 1735 |
| BmsI | GCATC | 1 cut(s) | 2021 |
| BpiI | GAAGAC | 5 cut(s) | 51, 233, 760, 1248, 1617 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1709, 1741, 1844, 1876 |
| BpmI | CTGGAG | 1 cut(s) | 1007 |
| Bpu14I | TTCGAA | 1 cut(s) | 244 |
| BpuEI | CTTGAG | 3 cut(s) | 298, 707, 1547 |
| BpuMI | CCSGG | 1 cut(s) | 1735 |
| Bsa29I | ATCGAT | 2 cut(s) | 350, 1167 |
| BsaAI | YACGTR | 1 cut(s) | 323 |
| BsaJI | CCNNGG | 4 cut(s) | 651, 1341, 1636, 1848 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 217, 247 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 362, 1626 |
| Bse1I | ACTGG | 2 cut(s) | 131, 1667 |
| Bse3DI | GCAATG | 2 cut(s) | 1226, 1256 |
| BseBI | CCWGG | 1 cut(s) | 1025 |
| BseCI | ATCGAT | 2 cut(s) | 350, 1167 |
| BseDI | CCNNGG | 4 cut(s) | 651, 1341, 1636, 1848 |
| BseGI | GGATG | 5 cut(s) | 34, 152, 681, 1309, 1757 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 362, 1626 |
| BseMI | GCAATG | 2 cut(s) | 1226, 1256 |
| BseMII | CTCAG | 4 cut(s) | 371, 480, 488, 1740 |
| BseNI | ACTGG | 2 cut(s) | 131, 1667 |
| BseXI | GCAGC | 2 cut(s) | 230, 530 |
| BseYI | CCCAGC | 1 cut(s) | 514 |
| Bsh1236I | CGCG | 2 cut(s) | 1160, 1850 |
| BshFI | GGCC | 1 cut(s) | 1028 |
| BshNI | GGYRCC | 1 cut(s) | 1484 |
| BshVI | ATCGAT | 2 cut(s) | 350, 1167 |
| BsiHKAI | GWGCWC | 1 cut(s) | 960 |
| BsiSI | CCGG | 1 cut(s) | 1735 |
| BslFI | GGGAC | 3 cut(s) | 1937, 1970, 1974 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 362, 1626 |
| BsmAI | GTCTC | 3 cut(s) | 50, 1220, 1777 |
| BsmFI | GGGAC | 3 cut(s) | 1937, 1970, 1974 |
| BsmI | GAATGC | 1 cut(s) | 1150 |
| BsnI | GGCC | 1 cut(s) | 1028 |
| Bsp119I | TTCGAA | 1 cut(s) | 244 |
| Bsp1286I | GDGCHC | 2 cut(s) | 515, 960 |
| Bsp1407I | TGTACA | 2 cut(s) | 532, 1997 |
| Bsp19I | CCATGG | 1 cut(s) | 1636 |
| BspACI | CCGC | 5 cut(s) | 90, 802, 1160, 1848, 1850 |
| BspANI | GGCC | 1 cut(s) | 1028 |
| BspCNI | CTCAG | 4 cut(s) | 370, 481, 487, 1739 |
| BspDI | ATCGAT | 2 cut(s) | 350, 1167 |
| BspFNI | CGCG | 2 cut(s) | 1160, 1850 |
| BspLI | GGNNCC | 5 cut(s) | 300, 1486, 1634, 1653, 1962 |
| BspPI | GGATC | 5 cut(s) | 272, 869, 887, 1031, 1885 |
| BspQI | GCTCTTC | 2 cut(s) | 773, 948 |
| BspT104I | TTCGAA | 1 cut(s) | 244 |
| BspT107I | GGYRCC | 1 cut(s) | 1484 |
| BsrDI | GCAATG | 2 cut(s) | 1226, 1256 |
| BsrGI | TGTACA | 2 cut(s) | 532, 1997 |
| BsrI | ACTGG | 2 cut(s) | 131, 1667 |
| BssECI | CCNNGG | 4 cut(s) | 651, 1341, 1636, 1848 |
| BssNAI | GTATAC | 1 cut(s) | 1500 |
| BssSI | CACGAG | 1 cut(s) | 768 |
| BssT1I | CCWWGG | 2 cut(s) | 1341, 1636 |
| Bst1107I | GTATAC | 1 cut(s) | 1500 |
| Bst2BI | CACGAG | 1 cut(s) | 768 |
| Bst2UI | CCWGG | 1 cut(s) | 1025 |
| Bst4CI | ACNGT | 5 cut(s) | 298, 1231, 1444, 1474, 1951 |
| Bst6I | CTCTTC | 4 cut(s) | 623, 773, 848, 948 |
| BstAUI | TGTACA | 2 cut(s) | 532, 1997 |
| BstBAI | YACGTR | 1 cut(s) | 323 |
| BstBI | TTCGAA | 1 cut(s) | 244 |
| BstC8I | GCNNGC | 2 cut(s) | 1621, 1857 |
| BstDEI | CTNAG | 7 cut(s) | 357, 474, 489, 644, 1538, 1726, 1989 |
| BstDSI | CCRYGG | 2 cut(s) | 1636, 1848 |
| BstF5I | GGATG | 5 cut(s) | 34, 152, 681, 1309, 1757 |
| BstFNI | CGCG | 2 cut(s) | 1160, 1850 |
| BstMAI | GTCTC | 3 cut(s) | 50, 1220, 1777 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1295, 1856, 1861 |
| BstNI | CCWGG | 1 cut(s) | 1025 |
| BstSCI | CCNGG | 2 cut(s) | 1023, 1733 |
| BstSFI | CTRYAG | 1 cut(s) | 1687 |
| BstUI | CGCG | 2 cut(s) | 1160, 1850 |
| BstV1I | GCAGC | 2 cut(s) | 230, 530 |
| BstV2I | GAAGAC | 5 cut(s) | 51, 233, 760, 1248, 1617 |
| BstX2I | RGATCY | 4 cut(s) | 632, 874, 1036, 1877 |
| BstYI | RGATCY | 4 cut(s) | 632, 874, 1036, 1877 |
| BstZ17I | GTATAC | 1 cut(s) | 1500 |
| Bsu15I | ATCGAT | 2 cut(s) | 350, 1167 |
| BsuRI | GGCC | 1 cut(s) | 1028 |
| BsuTUI | ATCGAT | 2 cut(s) | 350, 1167 |
| BtgI | CCRYGG | 2 cut(s) | 1636, 1848 |
| BtgZI | GCGATG | 1 cut(s) | 86 |
| BtsCI | GGATG | 5 cut(s) | 34, 152, 681, 1309, 1757 |
| BtsI | GCAGTG | 2 cut(s) | 462, 1614 |
| BtsIMutI | CAGTG | 3 cut(s) | 277, 462, 1614 |
| Cac8I | GCNNGC | 2 cut(s) | 1621, 1857 |
| Cfr13I | GGNCC | 2 cut(s) | 1652, 1961 |
| Cfr42I | CCGCGG | 1 cut(s) | 1851 |
| ClaI | ATCGAT | 2 cut(s) | 350, 1167 |
| CseI | GACGC | 1 cut(s) | 732 |
| Csp6I | GTAC | 5 cut(s) | 533, 843, 1485, 1596, 1998 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1750, 1785, 1989, 2024 |
| CviAII | CATG | 5 cut(s) | 161, 214, 1009, 1637, 1982 |
| CviQI | GTAC | 5 cut(s) | 533, 843, 1485, 1596, 1998 |
| DdeI | CTNAG | 7 cut(s) | 357, 474, 489, 644, 1538, 1726, 1989 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 836 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 836 |
| Eam1104I | CTCTTC | 4 cut(s) | 623, 773, 848, 948 |
| EarI | CTCTTC | 4 cut(s) | 623, 773, 848, 948 |
| Ecl136II | GAGCTC | 1 cut(s) | 958 |
| Eco130I | CCWWGG | 2 cut(s) | 1341, 1636 |
| Eco24I | GRGCYC | 2 cut(s) | 515, 960 |
| Eco47I | GGWCC | 2 cut(s) | 1652, 1961 |
| Eco53kI | GAGCTC | 1 cut(s) | 958 |
| Eco57I | CTGAAG | 4 cut(s) | 129, 647, 999, 1320 |
| Eco72I | CACGTG | 1 cut(s) | 323 |
| EcoICRI | GAGCTC | 1 cut(s) | 958 |
| EcoRII | CCWGG | 1 cut(s) | 1023 |
| EcoT14I | CCWWGG | 2 cut(s) | 1341, 1636 |
| EcoT22I | ATGCAT | 1 cut(s) | 1258 |
| EcoT38I | GRGCYC | 2 cut(s) | 515, 960 |
| ErhI | CCWWGG | 2 cut(s) | 1341, 1636 |
| FaeI | CATG | 5 cut(s) | 164, 217, 1012, 1640, 1985 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1382, 1414 |
| FaqI | GGGAC | 3 cut(s) | 1937, 1970, 1974 |
| FatI | CATG | 5 cut(s) | 160, 213, 1008, 1636, 1981 |
| FauNDI | CATATG | 1 cut(s) | 18 |
| FbaI | TGATCA | 2 cut(s) | 151, 820 |
| FblI | GTMKAC | 2 cut(s) | 81, 1499 |
| Fnu4HI | GCNGC | 3 cut(s) | 219, 519, 1161 |
| FokI | GGATG | 5 cut(s) | 41, 159, 688, 1316, 1744 |
| FriOI | GRGCYC | 2 cut(s) | 515, 960 |
| Fsp4HI | GCNGC | 3 cut(s) | 219, 519, 1161 |
| FspBI | CTAG | 5 cut(s) | 138, 222, 750, 942, 1205 |
| GluI | GCNGC | 3 cut(s) | 219, 519, 1161 |
| GsaI | CCCAGC | 1 cut(s) | 518 |
| GsuI | CTGGAG | 1 cut(s) | 1007 |
| HaeIII | GGCC | 1 cut(s) | 1028 |
| HapII | CCGG | 1 cut(s) | 1735 |
| HgaI | GACGC | 1 cut(s) | 732 |
| Hin1II | CATG | 5 cut(s) | 164, 217, 1012, 1640, 1985 |
| HindIII | AAGCTT | 2 cut(s) | 683, 1743 |
| HpaII | CCGG | 1 cut(s) | 1735 |
| HphI | GGTGA | 6 cut(s) | 79, 631, 667, 787, 1207, 1652 |
| Hpy166II | GTNNAC | 5 cut(s) | 82, 533, 1061, 1202, 1500 |
| Hpy188III | TCNNGA | 6 cut(s) | 138, 315, 750, 1361, 1516, 1749 |
| Hpy8I | GTNNAC | 5 cut(s) | 82, 533, 1061, 1202, 1500 |
| HpyAV | CCTTC | 6 cut(s) | 104, 355, 472, 894, 994, 1917 |
| HpyCH4III | ACNGT | 5 cut(s) | 298, 1231, 1444, 1474, 1951 |
| HpyCH4IV | ACGT | 1 cut(s) | 322 |
| HpyCH4V | TGCA | 9 cut(s) | 305, 508, 551, 584, 1115, 1256, 1298, 1794, 1805 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1295, 1856, 1861 |
| HpyF3I | CTNAG | 7 cut(s) | 357, 474, 489, 644, 1538, 1726, 1989 |
| HpySE526I | ACGT | 1 cut(s) | 322 |
| Hsp92II | CATG | 5 cut(s) | 164, 217, 1012, 1640, 1985 |
| KpnI | GGTACC | 1 cut(s) | 1488 |
| Ksp22I | TGATCA | 2 cut(s) | 151, 820 |
| KspI | CCGCGG | 1 cut(s) | 1851 |
| LguI | GCTCTTC | 2 cut(s) | 773, 948 |
| LmnI | GCTCC | 4 cut(s) | 73, 640, 1026, 1852 |
| Lsp1109I | GCAGC | 2 cut(s) | 230, 530 |
| LweI | GCATC | 1 cut(s) | 2021 |
| MaeI | CTAG | 5 cut(s) | 138, 222, 750, 942, 1205 |
| MaeII | ACGT | 1 cut(s) | 322 |
| MaeIII | GTNAC | 4 cut(s) | 122, 418, 804, 1945 |
| MflI | RGATCY | 4 cut(s) | 632, 874, 1036, 1877 |
| MhlI | GDGCHC | 2 cut(s) | 515, 960 |
| MluCI | AATT | 8 cut(s) | 167, 197, 332, 983, 1188, 1330, 1413, 1557 |
| MlyI | GAGTC | 3 cut(s) | 235, 415, 458 |
| MmeI | TCCRAC | 2 cut(s) | 124, 546 |
| Mph1103I | ATGCAT | 1 cut(s) | 1258 |
| MseI | TTAA | 6 cut(s) | 36, 485, 720, 861, 1191, 1739 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1267, 1697 |
| MspA1I | CMGCKG | 1 cut(s) | 1850 |
| MspI | CCGG | 1 cut(s) | 1735 |
| MspR9I | CCNGG | 2 cut(s) | 1025, 1735 |
| Mva1269I | GAATGC | 1 cut(s) | 1150 |
| MvaI | CCWGG | 1 cut(s) | 1025 |
| MvnI | CGCG | 2 cut(s) | 1160, 1850 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1295, 1856, 1861 |
| NciI | CCSGG | 1 cut(s) | 1735 |
| NcoI | CCATGG | 1 cut(s) | 1636 |
| NdeI | CATATG | 1 cut(s) | 18 |
| NlaIII | CATG | 5 cut(s) | 164, 217, 1012, 1640, 1985 |
| NlaIV | GGNNCC | 5 cut(s) | 300, 1486, 1634, 1653, 1962 |
| NmeAIII | GCCGAG | 1 cut(s) | 809 |
| NmuCI | GTSAC | 2 cut(s) | 418, 804 |
| NsiI | ATGCAT | 1 cut(s) | 1258 |
| NspV | TTCGAA | 1 cut(s) | 244 |
| PciSI | GCTCTTC | 2 cut(s) | 773, 948 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1164 |
| PctI | GAATGC | 1 cut(s) | 1150 |
| PfeI | GAWTC | 7 cut(s) | 176, 352, 538, 794, 911, 1519, 1839 |
| PkrI | GCNGC | 3 cut(s) | 220, 520, 1162 |
| PleI | GAGTC | 3 cut(s) | 234, 415, 457 |
| PmaCI | CACGTG | 1 cut(s) | 323 |
| PmlI | CACGTG | 1 cut(s) | 323 |
| PpsI | GAGTC | 3 cut(s) | 234, 415, 457 |
| Ppu21I | YACGTR | 1 cut(s) | 323 |
| Psp124BI | GAGCTC | 1 cut(s) | 960 |
| Psp6I | CCWGG | 1 cut(s) | 1023 |
| PspCI | CACGTG | 1 cut(s) | 323 |
| PspFI | CCCAGC | 1 cut(s) | 514 |
| PspGI | CCWGG | 1 cut(s) | 1023 |
| PspN4I | GGNNCC | 5 cut(s) | 300, 1486, 1634, 1653, 1962 |
| PspPI | GGNCC | 2 cut(s) | 1652, 1961 |
| PsuI | RGATCY | 4 cut(s) | 632, 874, 1036, 1877 |
| RsaI | GTAC | 5 cut(s) | 534, 844, 1486, 1597, 1999 |
| RsaNI | GTAC | 5 cut(s) | 533, 843, 1485, 1596, 1998 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1267, 1697 |
| SacI | GAGCTC | 1 cut(s) | 960 |
| SacII | CCGCGG | 1 cut(s) | 1851 |
| SapI | GCTCTTC | 2 cut(s) | 773, 948 |
| SaqAI | TTAA | 6 cut(s) | 36, 485, 720, 861, 1191, 1739 |
| SatI | GCNGC | 3 cut(s) | 219, 519, 1161 |
| Sau96I | GGNCC | 2 cut(s) | 1652, 1961 |
| ScaI | AGTACT | 1 cut(s) | 844 |
| SchI | GAGTC | 3 cut(s) | 235, 415, 458 |
| ScrFI | CCNGG | 2 cut(s) | 1025, 1735 |
| SduI | GDGCHC | 2 cut(s) | 515, 960 |
| SfaNI | GCATC | 1 cut(s) | 2021 |
| SfcI | CTRYAG | 1 cut(s) | 1687 |
| Sfr303I | CCGCGG | 1 cut(s) | 1851 |
| SfuI | TTCGAA | 1 cut(s) | 244 |
| SgrBI | CCGCGG | 1 cut(s) | 1851 |
| SinI | GGWCC | 2 cut(s) | 1652, 1961 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1267, 1697 |
| SmlI | CTYRAG | 3 cut(s) | 313, 686, 1562 |
| SmoI | CTYRAG | 3 cut(s) | 313, 686, 1562 |
| SpeI | ACTAGT | 1 cut(s) | 941 |
| Sse9I | AATT | 8 cut(s) | 167, 197, 332, 983, 1188, 1330, 1413, 1557 |
| SsiI | CCGC | 5 cut(s) | 90, 802, 1160, 1848, 1850 |
| SspI | AATATT | 1 cut(s) | 1153 |
| SspMI | CTAG | 5 cut(s) | 138, 222, 750, 942, 1205 |
| SstI | GAGCTC | 1 cut(s) | 960 |
| StyD4I | CCNGG | 2 cut(s) | 1023, 1733 |
| StyI | CCWWGG | 2 cut(s) | 1341, 1636 |
| TaaI | ACNGT | 5 cut(s) | 298, 1231, 1444, 1474, 1951 |
| TaiI | ACGT | 1 cut(s) | 325 |
| TaqI | TCGA | 8 cut(s) | 244, 350, 998, 1167, 1362, 1534, 1672, 1842 |
| TasI | AATT | 8 cut(s) | 167, 197, 332, 983, 1188, 1330, 1413, 1557 |
| TatI | WGTACW | 4 cut(s) | 532, 842, 1595, 1997 |
| TauI | GCSGC | 1 cut(s) | 1163 |
| TfiI | GAWTC | 7 cut(s) | 176, 352, 538, 794, 911, 1519, 1839 |
| Tru1I | TTAA | 6 cut(s) | 36, 485, 720, 861, 1191, 1739 |
| Tru9I | TTAA | 6 cut(s) | 36, 485, 720, 861, 1191, 1739 |
| TscAI | CASTG | 3 cut(s) | 277, 462, 1621 |
| TseFI | GTSAC | 2 cut(s) | 418, 804 |
| TseI | GCWGC | 2 cut(s) | 218, 518 |
| Tsp45I | GTSAC | 2 cut(s) | 418, 804 |
| TspDTI | ATGAA | 6 cut(s) | 966, 1025, 1563, 1697, 1883, 1970 |
| TspGWI | ACGGA | 1 cut(s) | 1316 |
| TspRI | CASTG | 3 cut(s) | 277, 462, 1621 |
| VpaK11BI | GGWCC | 2 cut(s) | 1652, 1961 |
| XapI | RAATTY | 5 cut(s) | 167, 197, 1330, 1413, 1557 |
| XbaI | TCTAGA | 2 cut(s) | 137, 749 |
| XmiI | GTMKAC | 2 cut(s) | 81, 1499 |
| XspI | CTAG | 5 cut(s) | 138, 222, 750, 942, 1205 |
| ZrmI | AGTACT | 1 cut(s) | 844 |
| Zsp2I | ATGCAT | 1 cut(s) | 1258 |