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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G17000 AT4G17000 AT4G17000 |
| fragaria_vesca | FvH4_2g02560 FvH4_2g02560 FvH4_2g02560 FvH4_2g02560 FvH4_2g02560 |
| malus_domestica | MD05G1112300.v1.1 MD10G1114900.v1.1 |
| prunus_persica | Prupe.8G156900_v2.0.a1 Prupe.8G157000_v2.0.a1 |
| pyrus_communis | pycom02g05590 pycom05g07390 pycom05g10780 pycom07g10710 pycom12g10280 pycom16g18860 |
| rosa_chinensis | RchiOBHm_Chr6g0246371 RchiOBHm_Chr6g0246451 RchiOBHm_Chr6g0246631 RchiOBHm_Chr6g0246641 |
| rosa_laevigata | RLG00000000929 RLG00000015260 |
| rosa_multiflora | Rmu_sc0001066.1_g000005 Rmu_sc0008965.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00214640 |
| rosa_rugosa | Rorug05G0520500 |
| rosa_samantha | Rh6AG034800 Rh6AG035100 Rh6BG029900 Rh6CG030300 Rh6DG029200 |
| rosa_wichuraiana | Rw6G002820 Rw6G002980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 406 |
| AccII | CGCG | 1 cut(s) | 6 |
| AciI | CCGC | 1 cut(s) | 1671 |
| AcuI | CTGAAG | 3 cut(s) | 66, 1188, 1845 |
| AfaI | GTAC | 3 cut(s) | 1879, 1956, 1969 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 154, 687 |
| AflII | CTTAAG | 1 cut(s) | 1385 |
| AflIII | ACRYGT | 1 cut(s) | 553 |
| AjnI | CCWGG | 1 cut(s) | 1829 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 542, 574, 782, 814, 1024, 1056, 1726, 1758 |
| AluBI | AGCT | 8 cut(s) | 320, 434, 869, 935, 945, 1542, 1589, 1874 |
| AluI | AGCT | 8 cut(s) | 320, 434, 869, 935, 945, 1542, 1589, 1874 |
| Alw26I | GTCTC | 2 cut(s) | 917, 1608 |
| AoxI | GGCC | 4 cut(s) | 195, 243, 731, 1910 |
| ApeKI | GCWGC | 5 cut(s) | 83, 515, 1714, 1838, 1975 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 877, 1269 |
| AspLEI | GCGC | 1 cut(s) | 6 |
| AspS9I | GGNCC | 2 cut(s) | 196, 731 |
| AsuC2I | CCSGG | 1 cut(s) | 629 |
| AsuHPI | GGTGA | 1 cut(s) | 1695 |
| AsuII | TTCGAA | 2 cut(s) | 109, 370 |
| BanI | GGYRCC | 1 cut(s) | 406 |
| BbsI | GAAGAC | 4 cut(s) | 433, 464, 1061, 1607 |
| BbvI | GCAGC | 5 cut(s) | 95, 527, 1726, 1850, 1962 |
| BccI | CCATC | 6 cut(s) | 310, 356, 527, 691, 1001, 1042 |
| BceAI | ACGGC | 1 cut(s) | 171 |
| BciT130I | CCWGG | 1 cut(s) | 1831 |
| BclI | TGATCA | 2 cut(s) | 16, 988 |
| BcnI | CCSGG | 1 cut(s) | 629 |
| BcoDI | GTCTC | 2 cut(s) | 917, 1608 |
| BfaI | CTAG | 1 cut(s) | 180 |
| BfmI | CTRYAG | 3 cut(s) | 309, 1095, 1976 |
| BfrI | CTTAAG | 1 cut(s) | 1385 |
| BisI | GCNGC | 5 cut(s) | 84, 516, 1715, 1839, 1976 |
| BlsI | GCNGC | 5 cut(s) | 85, 517, 1716, 1840, 1977 |
| Bme1390I | CCNGG | 2 cut(s) | 629, 1831 |
| BmgT120I | GGNCC | 2 cut(s) | 196, 731 |
| BmiI | GGNNCC | 4 cut(s) | 159, 408, 796, 1932 |
| BmrFI | CCNGG | 2 cut(s) | 629, 1831 |
| BmsI | GCATC | 3 cut(s) | 220, 1371, 1993 |
| BpiI | GAAGAC | 4 cut(s) | 433, 464, 1061, 1607 |
| Bpu14I | TTCGAA | 2 cut(s) | 109, 370 |
| BpuEI | CTTGAG | 2 cut(s) | 1293, 1409 |
| BpuMI | CCSGG | 1 cut(s) | 629 |
| BsaAI | YACGTR | 1 cut(s) | 1954 |
| BsaJI | CCNNGG | 7 cut(s) | 332, 471, 798, 1101, 1504, 1534, 1829 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1279, 1309 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 154, 687 |
| Bse1I | ACTGG | 2 cut(s) | 759, 1059 |
| Bse3DI | GCAATG | 2 cut(s) | 575, 641 |
| BseBI | CCWGG | 1 cut(s) | 1831 |
| BseDI | CCNNGG | 7 cut(s) | 332, 471, 798, 1101, 1504, 1534, 1829 |
| BseGI | GGATG | 3 cut(s) | 1053, 1147, 1386 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 154, 687 |
| BseMI | GCAATG | 2 cut(s) | 575, 641 |
| BseMII | CTCAG | 2 cut(s) | 1804, 1901 |
| BseNI | ACTGG | 2 cut(s) | 759, 1059 |
| BseRI | GAGGAG | 2 cut(s) | 869, 1635 |
| BseXI | GCAGC | 5 cut(s) | 95, 527, 1726, 1850, 1962 |
| BsgI | GTGCAG | 2 cut(s) | 534, 1733 |
| Bsh1236I | CGCG | 1 cut(s) | 6 |
| BshFI | GGCC | 4 cut(s) | 197, 245, 733, 1912 |
| BshNI | GGYRCC | 1 cut(s) | 406 |
| BsiSI | CCGG | 1 cut(s) | 628 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 154, 687 |
| BsmAI | GTCTC | 2 cut(s) | 917, 1608 |
| BsmI | GAATGC | 1 cut(s) | 646 |
| BsnI | GGCC | 4 cut(s) | 197, 245, 733, 1912 |
| Bsp119I | TTCGAA | 2 cut(s) | 109, 370 |
| Bsp1407I | TGTACA | 1 cut(s) | 1967 |
| Bsp143I | GATC | 6 cut(s) | 16, 264, 988, 1128, 1562, 1567 |
| Bsp19I | CCATGG | 1 cut(s) | 1534 |
| BspACI | CCGC | 1 cut(s) | 1671 |
| BspANI | GGCC | 4 cut(s) | 197, 245, 733, 1912 |
| BspCNI | CTCAG | 2 cut(s) | 1803, 1900 |
| BspFNI | CGCG | 1 cut(s) | 6 |
| BspHI | TCATGA | 1 cut(s) | 1018 |
| BspLI | GGNNCC | 4 cut(s) | 159, 408, 796, 1932 |
| BspMAI | CTGCAG | 1 cut(s) | 1980 |
| BspT104I | TTCGAA | 2 cut(s) | 109, 370 |
| BspT107I | GGYRCC | 1 cut(s) | 406 |
| BspTI | CTTAAG | 1 cut(s) | 1385 |
| BsrDI | GCAATG | 2 cut(s) | 575, 641 |
| BsrGI | TGTACA | 1 cut(s) | 1967 |
| BsrI | ACTGG | 2 cut(s) | 759, 1059 |
| BssECI | CCNNGG | 7 cut(s) | 332, 471, 798, 1101, 1504, 1534, 1829 |
| BssMI | GATC | 6 cut(s) | 16, 264, 988, 1128, 1562, 1567 |
| BssT1I | CCWWGG | 4 cut(s) | 332, 471, 798, 1534 |
| Bst2UI | CCWGG | 1 cut(s) | 1831 |
| Bst4CI | ACNGT | 4 cut(s) | 463, 986, 1157, 1967 |
| Bst6I | CTCTTC | 3 cut(s) | 680, 735, 1196 |
| BstAFI | CTTAAG | 1 cut(s) | 1385 |
| BstAUI | TGTACA | 1 cut(s) | 1967 |
| BstBAI | YACGTR | 1 cut(s) | 1954 |
| BstBI | TTCGAA | 2 cut(s) | 109, 370 |
| BstC8I | GCNNGC | 1 cut(s) | 1914 |
| BstDEI | CTNAG | 7 cut(s) | 71, 174, 261, 828, 1618, 1790, 1887 |
| BstDSI | CCRYGG | 1 cut(s) | 1534 |
| BstEII | GGTNACC | 1 cut(s) | 1217 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 685 |
| BstF5I | GGATG | 3 cut(s) | 1053, 1147, 1386 |
| BstFNI | CGCG | 1 cut(s) | 6 |
| BstHHI | GCGC | 1 cut(s) | 6 |
| BstKTI | GATC | 6 cut(s) | 19, 267, 991, 1131, 1565, 1570 |
| BstMAI | GTCTC | 2 cut(s) | 917, 1608 |
| BstMBI | GATC | 6 cut(s) | 16, 264, 988, 1128, 1562, 1567 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1539, 1871 |
| BstNI | CCWGG | 1 cut(s) | 1831 |
| BstNSI | RCATGY | 2 cut(s) | 557, 1503 |
| BstPI | GGTNACC | 1 cut(s) | 1217 |
| BstSCI | CCNGG | 2 cut(s) | 627, 1829 |
| BstSFI | CTRYAG | 3 cut(s) | 309, 1095, 1976 |
| BstUI | CGCG | 1 cut(s) | 6 |
| BstV1I | GCAGC | 5 cut(s) | 95, 527, 1726, 1850, 1962 |
| BstV2I | GAAGAC | 4 cut(s) | 433, 464, 1061, 1607 |
| BsuRI | GGCC | 4 cut(s) | 197, 245, 733, 1912 |
| BtgI | CCRYGG | 1 cut(s) | 1534 |
| BtsCI | GGATG | 3 cut(s) | 1053, 1147, 1386 |
| BtsI | GCAGTG | 2 cut(s) | 267, 722 |
| BtsIMutI | CAGTG | 4 cut(s) | 267, 722, 766, 1066 |
| Cac8I | GCNNGC | 1 cut(s) | 1914 |
| CciI | TCATGA | 1 cut(s) | 1018 |
| CfoI | GCGC | 1 cut(s) | 6 |
| Cfr13I | GGNCC | 2 cut(s) | 196, 731 |
| Csp6I | GTAC | 3 cut(s) | 1878, 1955, 1968 |
| CviQI | GTAC | 3 cut(s) | 1878, 1955, 1968 |
| DdeI | CTNAG | 7 cut(s) | 71, 174, 261, 828, 1618, 1790, 1887 |
| DpnI | GATC | 6 cut(s) | 18, 266, 990, 1130, 1564, 1569 |
| DpnII | GATC | 6 cut(s) | 16, 264, 988, 1128, 1562, 1567 |
| DraI | TTTAAA | 1 cut(s) | 894 |
| Eam1104I | CTCTTC | 3 cut(s) | 680, 735, 1196 |
| EarI | CTCTTC | 3 cut(s) | 680, 735, 1196 |
| Eco130I | CCWWGG | 4 cut(s) | 332, 471, 798, 1534 |
| Eco147I | AGGCCT | 1 cut(s) | 1912 |
| Eco32I | GATATC | 1 cut(s) | 535 |
| Eco57I | CTGAAG | 3 cut(s) | 66, 1188, 1845 |
| Eco91I | GGTNACC | 1 cut(s) | 1217 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 685 |
| EcoO109I | RGGNCCY | 1 cut(s) | 731 |
| EcoO65I | GGTNACC | 1 cut(s) | 1217 |
| EcoRII | CCWGG | 1 cut(s) | 1829 |
| EcoRV | GATATC | 1 cut(s) | 535 |
| EcoT14I | CCWWGG | 4 cut(s) | 332, 471, 798, 1534 |
| EcoT22I | ATGCAT | 1 cut(s) | 1137 |
| ErhI | CCWWGG | 4 cut(s) | 332, 471, 798, 1534 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 782, 814 |
| FbaI | TGATCA | 2 cut(s) | 16, 988 |
| Fnu4HI | GCNGC | 5 cut(s) | 84, 516, 1715, 1839, 1976 |
| FokI | GGATG | 3 cut(s) | 1060, 1154, 1393 |
| Fsp4HI | GCNGC | 5 cut(s) | 84, 516, 1715, 1839, 1976 |
| FspBI | CTAG | 1 cut(s) | 180 |
| GlaI | GCGC | 1 cut(s) | 5 |
| GluI | GCNGC | 5 cut(s) | 84, 516, 1715, 1839, 1976 |
| HaeIII | GGCC | 4 cut(s) | 197, 245, 733, 1912 |
| HapII | CCGG | 1 cut(s) | 628 |
| HhaI | GCGC | 1 cut(s) | 6 |
| Hin6I | GCGC | 1 cut(s) | 4 |
| HinP1I | GCGC | 1 cut(s) | 4 |
| HindIII | AAGCTT | 1 cut(s) | 432 |
| HpaII | CCGG | 1 cut(s) | 628 |
| HphI | GGTGA | 1 cut(s) | 1695 |
| Hpy166II | GTNNAC | 4 cut(s) | 982, 1064, 1328, 1461 |
| Hpy188III | TCNNGA | 4 cut(s) | 359, 523, 992, 1019 |
| Hpy8I | GTNNAC | 4 cut(s) | 982, 1064, 1328, 1461 |
| Hpy99I | CGWCG | 1 cut(s) | 11 |
| HpyAV | CCTTC | 7 cut(s) | 763, 784, 797, 1573, 1681, 1893, 1902 |
| HpyCH4III | ACNGT | 4 cut(s) | 463, 986, 1157, 1967 |
| HpyCH4IV | ACGT | 1 cut(s) | 1953 |
| HpyCH4V | TGCA | 9 cut(s) | 164, 272, 515, 646, 1135, 1418, 1714, 1916, 1978 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1539, 1871 |
| HpyF3I | CTNAG | 7 cut(s) | 71, 174, 261, 828, 1618, 1790, 1887 |
| HpySE526I | ACGT | 1 cut(s) | 1953 |
| HspAI | GCGC | 1 cut(s) | 4 |
| Ksp22I | TGATCA | 2 cut(s) | 16, 988 |
| Kzo9I | GATC | 6 cut(s) | 16, 264, 988, 1128, 1562, 1567 |
| LmnI | GCTCC | 6 cut(s) | 163, 856, 950, 1300, 1586, 1930 |
| Lsp1109I | GCAGC | 5 cut(s) | 95, 527, 1726, 1850, 1962 |
| LweI | GCATC | 3 cut(s) | 220, 1371, 1993 |
| MaeI | CTAG | 1 cut(s) | 180 |
| MaeII | ACGT | 1 cut(s) | 1953 |
| MaeIII | GTNAC | 2 cut(s) | 1217, 1701 |
| MalI | GATC | 6 cut(s) | 18, 266, 990, 1130, 1564, 1569 |
| MboI | GATC | 6 cut(s) | 16, 264, 988, 1128, 1562, 1567 |
| MfeI | CAATTG | 1 cut(s) | 602 |
| MluCI | AATT | 4 cut(s) | 35, 602, 782, 1512 |
| MlyI | GAGTC | 3 cut(s) | 35, 1436, 1636 |
| Mph1103I | ATGCAT | 1 cut(s) | 1137 |
| MroXI | GAANNNNTTC | 2 cut(s) | 877, 1269 |
| MseI | TTAA | 6 cut(s) | 102, 288, 785, 893, 1037, 1386 |
| MslI | CAYNNNNRTG | 4 cut(s) | 484, 1122, 1140, 1476 |
| MspCI | CTTAAG | 1 cut(s) | 1385 |
| MspI | CCGG | 1 cut(s) | 628 |
| MspR9I | CCNGG | 2 cut(s) | 629, 1831 |
| MunI | CAATTG | 1 cut(s) | 602 |
| Mva1269I | GAATGC | 1 cut(s) | 646 |
| MvaI | CCWGG | 1 cut(s) | 1831 |
| MvnI | CGCG | 1 cut(s) | 6 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1539, 1871 |
| NciI | CCSGG | 1 cut(s) | 629 |
| NcoI | CCATGG | 1 cut(s) | 1534 |
| NdeII | GATC | 6 cut(s) | 16, 264, 988, 1128, 1562, 1567 |
| NlaIV | GGNNCC | 4 cut(s) | 159, 408, 796, 1932 |
| NmuCI | GTSAC | 1 cut(s) | 1701 |
| NsiI | ATGCAT | 1 cut(s) | 1137 |
| NspI | RCATGY | 2 cut(s) | 557, 1503 |
| NspV | TTCGAA | 2 cut(s) | 109, 370 |
| PagI | TCATGA | 1 cut(s) | 1018 |
| PceI | AGGCCT | 1 cut(s) | 1912 |
| PciI | ACATGT | 1 cut(s) | 553 |
| PctI | GAATGC | 1 cut(s) | 646 |
| PdmI | GAANNNNTTC | 2 cut(s) | 877, 1269 |
| PfeI | GAWTC | 7 cut(s) | 638, 755, 824, 884, 901, 971, 1270 |
| PkrI | GCNGC | 5 cut(s) | 85, 517, 1716, 1840, 1977 |
| PleI | GAGTC | 3 cut(s) | 35, 1436, 1636 |
| PpsI | GAGTC | 3 cut(s) | 35, 1436, 1636 |
| Ppu21I | YACGTR | 1 cut(s) | 1954 |
| PscI | ACATGT | 1 cut(s) | 553 |
| Psp6I | CCWGG | 1 cut(s) | 1829 |
| PspEI | GGTNACC | 1 cut(s) | 1217 |
| PspGI | CCWGG | 1 cut(s) | 1829 |
| PspN4I | GGNNCC | 4 cut(s) | 159, 408, 796, 1932 |
| PspPI | GGNCC | 2 cut(s) | 196, 731 |
| PstI | CTGCAG | 1 cut(s) | 1980 |
| RsaI | GTAC | 3 cut(s) | 1879, 1956, 1969 |
| RsaNI | GTAC | 3 cut(s) | 1878, 1955, 1968 |
| RseI | CAYNNNNRTG | 4 cut(s) | 484, 1122, 1140, 1476 |
| SaqAI | TTAA | 6 cut(s) | 102, 288, 785, 893, 1037, 1386 |
| SatI | GCNGC | 5 cut(s) | 84, 516, 1715, 1839, 1976 |
| Sau3AI | GATC | 6 cut(s) | 16, 264, 988, 1128, 1562, 1567 |
| Sau96I | GGNCC | 2 cut(s) | 196, 731 |
| SchI | GAGTC | 3 cut(s) | 35, 1436, 1636 |
| ScrFI | CCNGG | 2 cut(s) | 629, 1831 |
| SfaNI | GCATC | 3 cut(s) | 220, 1371, 1993 |
| SfcI | CTRYAG | 3 cut(s) | 309, 1095, 1976 |
| SfuI | TTCGAA | 2 cut(s) | 109, 370 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 484, 1122, 1140, 1476 |
| SmlI | CTYRAG | 3 cut(s) | 1308, 1385, 1424 |
| SmoI | CTYRAG | 3 cut(s) | 1308, 1385, 1424 |
| Sse9I | AATT | 4 cut(s) | 35, 602, 782, 1512 |
| SseBI | AGGCCT | 1 cut(s) | 1912 |
| SsiI | CCGC | 1 cut(s) | 1671 |
| SspMI | CTAG | 1 cut(s) | 180 |
| StuI | AGGCCT | 1 cut(s) | 1912 |
| StyD4I | CCNGG | 2 cut(s) | 627, 1829 |
| StyI | CCWWGG | 4 cut(s) | 332, 471, 798, 1534 |
| TaaI | ACNGT | 4 cut(s) | 463, 986, 1157, 1967 |
| TaiI | ACGT | 1 cut(s) | 1956 |
| TaqI | TCGA | 2 cut(s) | 109, 370 |
| TasI | AATT | 4 cut(s) | 35, 602, 782, 1512 |
| TatI | WGTACW | 1 cut(s) | 1967 |
| TfiI | GAWTC | 7 cut(s) | 638, 755, 824, 884, 901, 971, 1270 |
| Tru1I | TTAA | 6 cut(s) | 102, 288, 785, 893, 1037, 1386 |
| Tru9I | TTAA | 6 cut(s) | 102, 288, 785, 893, 1037, 1386 |
| TscAI | CASTG | 4 cut(s) | 274, 722, 766, 1066 |
| TseFI | GTSAC | 1 cut(s) | 1701 |
| TseI | GCWGC | 5 cut(s) | 83, 515, 1714, 1838, 1975 |
| Tsp45I | GTSAC | 1 cut(s) | 1701 |
| TspDTI | ATGAA | 8 cut(s) | 42, 468, 630, 753, 782, 1035, 1386, 1403 |
| TspGWI | ACGGA | 2 cut(s) | 1154, 1639 |
| TspRI | CASTG | 4 cut(s) | 274, 722, 766, 1066 |
| Vha464I | CTTAAG | 1 cut(s) | 1385 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 685 |
| XceI | RCATGY | 2 cut(s) | 557, 1503 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 400, 1066 |
| XmnI | GAANNNNTTC | 2 cut(s) | 877, 1269 |
| XspI | CTAG | 1 cut(s) | 180 |
| Zsp2I | ATGCAT | 1 cut(s) | 1137 |