Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0003614

Physical Location & Seq

Genomic Coordinates Forward (+)

16762026 .. 16764721

Gene Structure 2696 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G156900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1563 bp

ATGGAGGAAGAAACTAAGTGCGTGCAGATCGACGGCGAGGAAGGCGGGGACGAGTTCTACGAGAAGATCGAAGCGCCCAAGTTCGTCGACTTCACCGGACCCGACCCGTACCGACCCGACGACCGCTACTGGTTCTGCATGCGAGTTGGGTGTGATCAGAAGCATGAAGAAGAATTAGACTCTGAAGCAGTCTACAAAAACTTTGTTCTTCGGGTCATGGCAGCAAGAAGTCCTAATGTAAGACACAGAAAAACACCAAGTTTGAAATGCCCACTTACTGCTCCTGCAAAATCTTCCAAGCCTAGAGTATCAAGGTTGGCCCTGATTTCTTCGTTCTCTCGTAAGATGGTTGATGTCAAAGATAAAGCCAGACCTCTTCAAAAGATCAGTGCAACCCCAAATGTTAAGGCAAAGCAACCATCTTCTGTGGCCAAAGCTCTCACTAGTCCAAGGAATAGAAAACCCATCTCAAATCCAGACACATTTCGAAGTGTTAGGAACCCCAAACTGAAAAATGTTGCAGTGCCAAAAAATAGGGTGGTGGCTAAAGCTCTGGTATTTCACTCTCCAAAGAAGGCTGTAAGAACCAAAGTTTCGAAGGAATGGGGTAGTCCTGTGGGAAAAATGTGTTCAGCCATGAAGAAACTTGAGATCACCAGTGGAAAGAAACATGTATTGGGGTATAACAAGCCATTGCCTTTAGATACTTCAAGAAAACAATTCAGAGGGCGGGAAGTTAAAAGCCGGGTTTTTGATTCATTGCATTCCAACAATTGCAAGGGCCAGGAAGCCAAATCCATGAAGAGAAAGAACAAGGAAACAGACTTGAAACAGTGTTGTGATACTGTGCCTCATGAAGGGATTAATGACAACGATTCCGCCGACATGGAGGTTGATGAAAAATCAAGAAATGGTACTCTTGAAGGGTTCTCCTTGTCAGGTACTGCTAAGAGTAGTGGAGTAAATGGTGACGAACAGTGTATGGGAACTGGAAAAACCTCAGAACCTCCACTAGGTGAGAATCAAGTTGAAGTCCTATCAGAGACCTCCAAAGGTGACCCTACCTCCTTGTCAAGTTCCAAACACGGGGATTCAGAAGAGAATGATGATAAGGAGAATGCCAAAGATGGAAATGGTCATGTGGAGAAAATAAAGTCAAGTTCAGAGAAGGCGAACACCGTTGAAAACATGGACAAAGATGATGATAAAGAAAATTCTTTGGCCTCTGACAACCCAGAAAATGAAAATGAGGTATTTGAGAGTGATGATAAAGAAAATAATAAAGCTTCTGATGAGAACAGAGACCTGATTACTAATGGTCACTCCAAGAGGAAAAATCTGGGCAAGCATGGTCCTTATAAAAACTCACAAAAGGTCAATCAAGCTCAAGAGATGAAGAAAGAGAGCTCTACATCTGCTGCCACCAATGCTCAAGGGATGAAGAATAGGAAACCAAAGTCTACAAACCCTAAACCTTTTAGGTTTAGAACTGATGAAAGAGGGATGCTTAAGGAAGCAACTTCGGAGAAAAAAGTTCATGCACCTCTAAGGAAATCACATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

521

Amino Acids

57.95

Weight (kDa)

9.29

Isoelectric Point (pI)

33.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003614)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17000 AT4G17000 AT4G17000
fragaria_vesca	FvH4_2g02560 FvH4_2g02560 FvH4_2g02560 FvH4_2g02560 FvH4_2g02560
malus_domestica	MD05G1112300.v1.1 MD10G1114900.v1.1
prunus_persica	Prupe.8G156900_v2.0.a1 Prupe.8G157000_v2.0.a1
pyrus_communis	pycom02g05590 pycom05g07390 pycom05g10780 pycom07g10710 pycom12g10280 pycom16g18860
rosa_chinensis	RchiOBHm_Chr6g0246371 RchiOBHm_Chr6g0246451 RchiOBHm_Chr6g0246631 RchiOBHm_Chr6g0246641
rosa_laevigata	RLG00000000929 RLG00000015260
rosa_multiflora	Rmu_sc0001066.1_g000005 Rmu_sc0008965.1_g000002
rosa_roxburghii	Rroxscaffold_7G00214640
rosa_rugosa	Rorug05G0520500
rosa_samantha	Rh6AG034800 Rh6AG035100 Rh6BG029900 Rh6CG030300 Rh6DG029200
rosa_wichuraiana	Rw6G002820 Rw6G002980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1359
AccI	GTMKAC	3 cut(s)	87, 192, 1460
AciI	CCGC	4 cut(s)	45, 124, 730, 879
AcoI	YGGCCR	1 cut(s)	429
AcsI	RAATTY	1 cut(s)	1213
AcuI	CTGAAG	1 cut(s)	204
AdeI	CACNNNGTG	1 cut(s)	1016
AfaI	GTAC	3 cut(s)	110, 916, 943
AfiI	CCNNNNNNNGG	3 cut(s)	857, 1013, 1086
AflII	CTTAAG	1 cut(s)	1508
AflIII	ACRYGT	1 cut(s)	670
AgsI	TTSAA	7 cut(s)	265, 380, 711, 829, 923, 1031, 1184
AhlI	ACTAGT	1 cut(s)	443
AjnI	CCWGG	1 cut(s)	783
AjuI	GAANNNNNNNTTGG	2 cut(s)	659, 691
AluBI	AGCT	5 cut(s)	437, 551, 1286, 1385, 1407
AluI	AGCT	5 cut(s)	437, 551, 1286, 1385, 1407
Alw21I	GWGCWC	1 cut(s)	1409
Alw26I	GTCTC	2 cut(s)	1037, 1296
AlwNI	CAGNNNCTG	1 cut(s)	944
AoxI	GGCC	4 cut(s)	318, 429, 781, 1221
ApeKI	GCWGC	2 cut(s)	221, 1418
ApoI	RAATTY	1 cut(s)	1213
AseI	ATTAAT	1 cut(s)	864
AspLEI	GCGC	1 cut(s)	76
AspS9I	GGNCC	4 cut(s)	98, 319, 781, 1352
AsuC2I	CCSGG	1 cut(s)	746
AsuHPI	GGTGA	5 cut(s)	85, 646, 980, 1028, 1067
AsuII	TTCGAA	2 cut(s)	487, 596
AvaII	GGWCC	2 cut(s)	98, 1352
BalI	TGGCCA	1 cut(s)	431
BanII	GRGCYC	1 cut(s)	1409
Bbv12I	GWGCWC	1 cut(s)	1409
BbvI	GCAGC	2 cut(s)	233, 1405
BccI	CCATC	4 cut(s)	340, 427, 473, 1121
BceAI	ACGGC	1 cut(s)	49
BciT130I	CCWGG	1 cut(s)	785
BclI	TGATCA	1 cut(s)	154
BcnI	CCSGG	1 cut(s)	746
BcoDI	GTCTC	2 cut(s)	1037, 1296
BcuI	ACTAGT	1 cut(s)	443
BfaI	CTAG	3 cut(s)	303, 444, 1013
BfoI	RGCGCY	1 cut(s)	77
BfrI	CTTAAG	1 cut(s)	1508
BisI	GCNGC	2 cut(s)	222, 1419
BlsI	GCNGC	2 cut(s)	223, 1420
Bme1390I	CCNGG	2 cut(s)	746, 785
Bme18I	GGWCC	2 cut(s)	98, 1352
BmgT120I	GGNCC	4 cut(s)	98, 319, 781, 1352
BmiI	GGNNCC	2 cut(s)	100, 500
BmrFI	CCNGG	2 cut(s)	746, 785
BmsI	GCATC	1 cut(s)	1494
Bpu14I	TTCGAA	2 cut(s)	487, 596
BpuEI	CTTGAG	3 cut(s)	668, 1371, 1416
BpuMI	CCSGG	1 cut(s)	746
BsaI	GGTCTC	2 cut(s)	1037, 1296
BsaJI	CCNNGG	1 cut(s)	449
BsaWI	WCCGGW	1 cut(s)	95
BsaXI	ACNNNNNCTCC	2 cut(s)	1049, 1079
Bsc4I	CCNNNNNNNGG	3 cut(s)	857, 1013, 1086
Bse1I	ACTGG	3 cut(s)	134, 657, 994
Bse3DI	GCAATG	2 cut(s)	692, 758
BseBI	CCWGG	1 cut(s)	785
BseDI	CCNNGG	1 cut(s)	449
BseGI	GGATG	2 cut(s)	1443, 1509
BseLI	CCNNNNNNNGG	3 cut(s)	857, 1013, 1086
BseMI	GCAATG	2 cut(s)	692, 758
BseMII	CTCAG	1 cut(s)	1014
BseNI	ACTGG	3 cut(s)	134, 657, 994
BseXI	GCAGC	2 cut(s)	233, 1405
BsgI	GTGCAG	1 cut(s)	44
Bsh1285I	CGRYCG	1 cut(s)	124
BshFI	GGCC	4 cut(s)	320, 431, 783, 1223
BsiEI	CGRYCG	1 cut(s)	124
BsiHKAI	GWGCWC	1 cut(s)	1409
BsiSI	CCGG	2 cut(s)	96, 745
BslFI	GGGAC	1 cut(s)	62
BslI	CCNNNNNNNGG	3 cut(s)	857, 1013, 1086
BsmAI	GTCTC	2 cut(s)	1037, 1296
BsmFI	GGGAC	1 cut(s)	62
BsmI	GAATGC	2 cut(s)	763, 1123
BsnI	GGCC	4 cut(s)	320, 431, 783, 1223
Bso31I	GGTCTC	2 cut(s)	1037, 1296
Bsp119I	TTCGAA	2 cut(s)	487, 596
Bsp1286I	GDGCHC	1 cut(s)	1409
Bsp143I	GATC	5 cut(s)	27, 66, 154, 384, 651
BspACI	CCGC	4 cut(s)	45, 124, 730, 879
BspANI	GGCC	4 cut(s)	320, 431, 783, 1223
BspCNI	CTCAG	1 cut(s)	1013
BspHI	TCATGA	1 cut(s)	853
BspLI	GGNNCC	2 cut(s)	100, 500
BspT104I	TTCGAA	2 cut(s)	487, 596
BspTI	CTTAAG	1 cut(s)	1508
BspTNI	GGTCTC	2 cut(s)	1037, 1296
BsrDI	GCAATG	2 cut(s)	692, 758
BsrI	ACTGG	3 cut(s)	134, 657, 994
BssECI	CCNNGG	1 cut(s)	449
BssMI	GATC	5 cut(s)	27, 66, 154, 384, 651
BssT1I	CCWWGG	1 cut(s)	449
Bst2UI	CCWGG	1 cut(s)	785
Bst4CI	ACNGT	4 cut(s)	834, 847, 978, 1180
Bst6I	CTCTTC	3 cut(s)	381, 797, 1092
BstAFI	CTTAAG	1 cut(s)	1508
BstBI	TTCGAA	2 cut(s)	487, 596
BstC8I	GCNNGC	3 cut(s)	23, 140, 1346
BstDEI	CTNAG	4 cut(s)	15, 948, 1000, 1547
BstEII	GGTNACC	1 cut(s)	1055
BstENI	CCTNNNNNAGG	2 cut(s)	855, 1011
BstF5I	GGATG	2 cut(s)	1443, 1509
BstH2I	RGCGCY	1 cut(s)	77
BstHHI	GCGC	1 cut(s)	76
BstKTI	GATC	5 cut(s)	30, 69, 157, 387, 654
BstMAI	GTCTC	2 cut(s)	1037, 1296
BstMBI	GATC	5 cut(s)	27, 66, 154, 384, 651
BstMCI	CGRYCG	1 cut(s)	124
BstMWI	GCNNNNNNNGC	2 cut(s)	42, 1427
BstNI	CCWGG	1 cut(s)	785
BstNSI	RCATGY	2 cut(s)	142, 674
BstPI	GGTNACC	1 cut(s)	1055
BstSCI	CCNGG	2 cut(s)	744, 783
BstV1I	GCAGC	2 cut(s)	233, 1405
BsuRI	GGCC	4 cut(s)	320, 431, 783, 1223
BtsCI	GGATG	2 cut(s)	1443, 1509
BtsI	GCAGTG	1 cut(s)	528
BtsIMutI	CAGTG	5 cut(s)	394, 528, 664, 839, 983
Cac8I	GCNNGC	3 cut(s)	23, 140, 1346
CaiI	CAGNNNCTG	1 cut(s)	944
CciI	TCATGA	1 cut(s)	853
CfoI	GCGC	1 cut(s)	76
Cfr13I	GGNCC	4 cut(s)	98, 319, 781, 1352
Csp6I	GTAC	3 cut(s)	109, 915, 942
CviQI	GTAC	3 cut(s)	109, 915, 942
DdeI	CTNAG	4 cut(s)	15, 948, 1000, 1547
DpnI	GATC	5 cut(s)	29, 68, 156, 386, 653
DpnII	GATC	5 cut(s)	27, 66, 154, 384, 651
DraIII	CACNNNGTG	1 cut(s)	1016
EaeI	YGGCCR	1 cut(s)	429
Eam1104I	CTCTTC	3 cut(s)	381, 797, 1092
EarI	CTCTTC	3 cut(s)	381, 797, 1092
EciI	GGCGGA	1 cut(s)	868
Ecl136II	GAGCTC	1 cut(s)	1407
Eco130I	CCWWGG	1 cut(s)	449
Eco24I	GRGCYC	1 cut(s)	1409
Eco31I	GGTCTC	2 cut(s)	1037, 1296
Eco47I	GGWCC	2 cut(s)	98, 1352
Eco53kI	GAGCTC	1 cut(s)	1407
Eco57I	CTGAAG	1 cut(s)	204
Eco91I	GGTNACC	1 cut(s)	1055
EcoICRI	GAGCTC	1 cut(s)	1407
EcoNI	CCTNNNNNAGG	2 cut(s)	855, 1011
EcoO65I	GGTNACC	1 cut(s)	1055
EcoRII	CCWGG	1 cut(s)	783
EcoT14I	CCWWGG	1 cut(s)	449
EcoT38I	GRGCYC	1 cut(s)	1409
ErhI	CCWWGG	1 cut(s)	449
FaqI	GGGAC	1 cut(s)	62
FauI	CCCGC	2 cut(s)	38, 723
FbaI	TGATCA	1 cut(s)	154
FblI	GTMKAC	3 cut(s)	87, 192, 1460
Fnu4HI	GCNGC	2 cut(s)	222, 1419
FokI	GGATG	2 cut(s)	1450, 1516
FriOI	GRGCYC	1 cut(s)	1409
Fsp4HI	GCNGC	2 cut(s)	222, 1419
FspBI	CTAG	3 cut(s)	303, 444, 1013
GlaI	GCGC	1 cut(s)	75
GluI	GCNGC	2 cut(s)	222, 1419
HaeII	RGCGCY	1 cut(s)	77
HaeIII	GGCC	4 cut(s)	320, 431, 783, 1223
HapII	CCGG	2 cut(s)	96, 745
HhaI	GCGC	1 cut(s)	76
Hin6I	GCGC	1 cut(s)	74
HinP1I	GCGC	1 cut(s)	74
HincII	GTYRAC	1 cut(s)	88
HindII	GTYRAC	1 cut(s)	88
HindIII	AAGCTT	1 cut(s)	1284
HinfI	GANTC	5 cut(s)	179, 755, 875, 1021, 1091
HpaII	CCGG	2 cut(s)	96, 745
HphI	GGTGA	5 cut(s)	85, 646, 980, 1028, 1067
Hpy166II	GTNNAC	3 cut(s)	88, 193, 1461
Hpy188III	TCNNGA	6 cut(s)	476, 711, 854, 906, 920, 1388
Hpy8I	GTNNAC	3 cut(s)	88, 193, 1461
Hpy99I	CGWCG	3 cut(s)	35, 89, 122
HpyAV	CCTTC	6 cut(s)	35, 568, 592, 851, 917, 1162
HpyCH4III	ACNGT	4 cut(s)	834, 847, 978, 1180
HpyCH4V	TGCA	8 cut(s)	25, 138, 287, 392, 521, 763, 777, 1541
HpyF10VI	GCNNNNNNNGC	2 cut(s)	42, 1427
HpyF3I	CTNAG	4 cut(s)	15, 948, 1000, 1547
HspAI	GCGC	1 cut(s)	74
Ksp22I	TGATCA	1 cut(s)	154
Kzo9I	GATC	5 cut(s)	27, 66, 154, 384, 651
LmnI	GCTCC	1 cut(s)	286
Lsp1109I	GCAGC	2 cut(s)	233, 1405
LweI	GCATC	1 cut(s)	1494
MaeI	CTAG	3 cut(s)	303, 444, 1013
MaeIII	GTNAC	3 cut(s)	968, 1055, 1319
MalI	GATC	5 cut(s)	29, 68, 156, 386, 653
MboI	GATC	5 cut(s)	27, 66, 154, 384, 651
MfeI	CAATTG	1 cut(s)	772
MhlI	GDGCHC	1 cut(s)	1409
MlsI	TGGCCA	1 cut(s)	431
MluCI	AATT	4 cut(s)	173, 719, 772, 1213
MluNI	TGGCCA	1 cut(s)	431
MlyI	GAGTC	1 cut(s)	173
MmeI	TCCRAC	1 cut(s)	792
Mox20I	TGGCCA	1 cut(s)	431
MscI	TGGCCA	1 cut(s)	431
MseI	TTAA	4 cut(s)	405, 738, 864, 1509
Msp20I	TGGCCA	1 cut(s)	431
MspCI	CTTAAG	1 cut(s)	1508
MspI	CCGG	2 cut(s)	96, 745
MspR9I	CCNGG	2 cut(s)	746, 785
MunI	CAATTG	1 cut(s)	772
Mva1269I	GAATGC	2 cut(s)	763, 1123
MvaI	CCWGG	1 cut(s)	785
MwoI	GCNNNNNNNGC	2 cut(s)	42, 1427
NciI	CCSGG	1 cut(s)	746
NdeII	GATC	5 cut(s)	27, 66, 154, 384, 651
NlaIV	GGNNCC	2 cut(s)	100, 500
NmuCI	GTSAC	3 cut(s)	968, 1055, 1319
NspI	RCATGY	2 cut(s)	142, 674
NspV	TTCGAA	2 cut(s)	487, 596
PaeI	GCATGC	1 cut(s)	142
PagI	TCATGA	1 cut(s)	853
PciI	ACATGT	1 cut(s)	670
PcsI	WCGNNNNNNNCGW	3 cut(s)	57, 66, 879
PctI	GAATGC	2 cut(s)	763, 1123
PfeI	GAWTC	4 cut(s)	755, 875, 1021, 1091
PkrI	GCNGC	2 cut(s)	223, 1420
PleI	GAGTC	1 cut(s)	173
PpsI	GAGTC	1 cut(s)	173
PscI	ACATGT	1 cut(s)	670
PshBI	ATTAAT	1 cut(s)	864
PsiI	TTATAA	1 cut(s)	1359
Psp124BI	GAGCTC	1 cut(s)	1409
Psp6I	CCWGG	1 cut(s)	783
PspEI	GGTNACC	1 cut(s)	1055
PspGI	CCWGG	1 cut(s)	783
PspN4I	GGNNCC	2 cut(s)	100, 500
PspPI	GGNCC	4 cut(s)	98, 319, 781, 1352
PstNI	CAGNNNCTG	1 cut(s)	944
RsaI	GTAC	3 cut(s)	110, 916, 943
RsaNI	GTAC	3 cut(s)	109, 915, 942
SacI	GAGCTC	1 cut(s)	1409
SalI	GTCGAC	1 cut(s)	86
SaqAI	TTAA	4 cut(s)	405, 738, 864, 1509
SatI	GCNGC	2 cut(s)	222, 1419
Sau3AI	GATC	5 cut(s)	27, 66, 154, 384, 651
Sau96I	GGNCC	4 cut(s)	98, 319, 781, 1352
SchI	GAGTC	1 cut(s)	173
ScrFI	CCNGG	2 cut(s)	746, 785
SduI	GDGCHC	1 cut(s)	1409
SfaNI	GCATC	1 cut(s)	1494
SfuI	TTCGAA	2 cut(s)	487, 596
SinI	GGWCC	2 cut(s)	98, 1352
SmlI	CTYRAG	4 cut(s)	647, 1386, 1431, 1508
SmoI	CTYRAG	4 cut(s)	647, 1386, 1431, 1508
SpeI	ACTAGT	1 cut(s)	443
SphI	GCATGC	1 cut(s)	142
Sse9I	AATT	4 cut(s)	173, 719, 772, 1213
SsiI	CCGC	4 cut(s)	45, 124, 730, 879
SspMI	CTAG	3 cut(s)	303, 444, 1013
SstI	GAGCTC	1 cut(s)	1409
StyD4I	CCNGG	2 cut(s)	744, 783
StyI	CCWWGG	1 cut(s)	449
TaaI	ACNGT	4 cut(s)	834, 847, 978, 1180
TaqI	TCGA	5 cut(s)	30, 69, 87, 487, 596
TasI	AATT	4 cut(s)	173, 719, 772, 1213
TfiI	GAWTC	4 cut(s)	755, 875, 1021, 1091
Tru1I	TTAA	4 cut(s)	405, 738, 864, 1509
Tru9I	TTAA	4 cut(s)	405, 738, 864, 1509
TscAI	CASTG	5 cut(s)	394, 528, 664, 839, 983
TseFI	GTSAC	3 cut(s)	968, 1055, 1319
TseI	GCWGC	2 cut(s)	221, 1418
Tsp45I	GTSAC	3 cut(s)	968, 1055, 1319
TspRI	CASTG	5 cut(s)	394, 528, 664, 839, 983
Vha464I	CTTAAG	1 cut(s)	1508
VpaK11BI	GGWCC	2 cut(s)	98, 1352
VspI	ATTAAT	1 cut(s)	864
XagI	CCTNNNNNAGG	2 cut(s)	855, 1011
XapI	RAATTY	1 cut(s)	1213
XceI	RCATGY	2 cut(s)	142, 674
XmiI	GTMKAC	3 cut(s)	87, 192, 1460
XspI	CTAG	3 cut(s)	303, 444, 1013

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.