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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G17000 AT4G17000 AT4G17000 |
| fragaria_vesca | FvH4_2g02560 FvH4_2g02560 FvH4_2g02560 FvH4_2g02560 FvH4_2g02560 |
| malus_domestica | MD05G1112300.v1.1 MD10G1114900.v1.1 |
| prunus_persica | Prupe.8G156900_v2.0.a1 Prupe.8G157000_v2.0.a1 |
| pyrus_communis | pycom02g05590 pycom05g07390 pycom05g10780 pycom07g10710 pycom12g10280 pycom16g18860 |
| rosa_chinensis | RchiOBHm_Chr6g0246371 RchiOBHm_Chr6g0246451 RchiOBHm_Chr6g0246631 RchiOBHm_Chr6g0246641 |
| rosa_laevigata | RLG00000000929 RLG00000015260 |
| rosa_multiflora | Rmu_sc0001066.1_g000005 Rmu_sc0008965.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00214640 |
| rosa_rugosa | Rorug05G0520500 |
| rosa_samantha | Rh6AG034800 Rh6AG035100 Rh6BG029900 Rh6CG030300 Rh6DG029200 |
| rosa_wichuraiana | Rw6G002820 Rw6G002980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 547 |
| AccI | GTMKAC | 2 cut(s) | 90, 707 |
| AccII | CGCG | 1 cut(s) | 147 |
| AciI | CCGC | 2 cut(s) | 48, 1812 |
| AclWI | GGATC | 1 cut(s) | 569 |
| AcoI | YGGCCR | 1 cut(s) | 34 |
| AcuI | CTGAAG | 3 cut(s) | 207, 1329, 1986 |
| AfaI | GTAC | 3 cut(s) | 2020, 2097, 2110 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 295, 828 |
| AflII | CTTAAG | 1 cut(s) | 1526 |
| AflIII | ACRYGT | 1 cut(s) | 694 |
| AjnI | CCWGG | 2 cut(s) | 36, 1970 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 683, 715, 923, 955, 1165, 1197, 1867, 1899 |
| AluBI | AGCT | 8 cut(s) | 461, 575, 1010, 1076, 1086, 1683, 1730, 2015 |
| AluI | AGCT | 8 cut(s) | 461, 575, 1010, 1076, 1086, 1683, 1730, 2015 |
| Alw26I | GTCTC | 2 cut(s) | 1058, 1749 |
| AlwI | GGATC | 1 cut(s) | 569 |
| AoxI | GGCC | 5 cut(s) | 34, 336, 384, 872, 2051 |
| ApeKI | GCWGC | 5 cut(s) | 224, 656, 1855, 1979, 2116 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1018, 1410 |
| AspLEI | GCGC | 1 cut(s) | 147 |
| AspS9I | GGNCC | 2 cut(s) | 337, 872 |
| AsuC2I | CCSGG | 1 cut(s) | 770 |
| AsuHPI | GGTGA | 2 cut(s) | 88, 1836 |
| AsuII | TTCGAA | 2 cut(s) | 250, 511 |
| BanI | GGYRCC | 1 cut(s) | 547 |
| BbsI | GAAGAC | 3 cut(s) | 574, 1202, 1748 |
| BbvCI | CCTCAGC | 1 cut(s) | 15 |
| BbvI | GCAGC | 5 cut(s) | 236, 668, 1867, 1991, 2103 |
| BccI | CCATC | 4 cut(s) | 451, 832, 1142, 1183 |
| BceAI | ACGGC | 2 cut(s) | 49, 312 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 130, 164 |
| BciT130I | CCWGG | 2 cut(s) | 38, 1972 |
| BclI | TGATCA | 2 cut(s) | 157, 1129 |
| BcnI | CCSGG | 1 cut(s) | 770 |
| BcoDI | GTCTC | 2 cut(s) | 1058, 1749 |
| BfaI | CTAG | 1 cut(s) | 321 |
| BfmI | CTRYAG | 3 cut(s) | 450, 1236, 2117 |
| BfrI | CTTAAG | 1 cut(s) | 1526 |
| BisI | GCNGC | 5 cut(s) | 225, 657, 1856, 1980, 2117 |
| BlsI | GCNGC | 5 cut(s) | 226, 658, 1857, 1981, 2118 |
| Bme1390I | CCNGG | 3 cut(s) | 38, 770, 1972 |
| BmgT120I | GGNCC | 2 cut(s) | 337, 872 |
| BmiI | GGNNCC | 5 cut(s) | 78, 300, 549, 937, 2073 |
| BmrFI | CCNGG | 3 cut(s) | 38, 770, 1972 |
| BmsI | GCATC | 3 cut(s) | 361, 1512, 2134 |
| BpiI | GAAGAC | 3 cut(s) | 574, 1202, 1748 |
| Bpu10I | CCTNAGC | 1 cut(s) | 15 |
| Bpu14I | TTCGAA | 2 cut(s) | 250, 511 |
| BpuEI | CTTGAG | 2 cut(s) | 1434, 1550 |
| BpuMI | CCSGG | 1 cut(s) | 770 |
| BsaJI | CCNNGG | 8 cut(s) | 37, 473, 612, 939, 1242, 1645, 1675, 1970 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 295, 828 |
| Bse1I | ACTGG | 1 cut(s) | 900 |
| Bse3DI | GCAATG | 1 cut(s) | 782 |
| BseBI | CCWGG | 2 cut(s) | 38, 1972 |
| BseDI | CCNNGG | 8 cut(s) | 37, 473, 612, 939, 1242, 1645, 1675, 1970 |
| BseGI | GGATG | 4 cut(s) | 489, 1194, 1288, 1527 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 295, 828 |
| BseMI | GCAATG | 1 cut(s) | 782 |
| BseMII | CTCAG | 3 cut(s) | 29, 1945, 2042 |
| BseNI | ACTGG | 1 cut(s) | 900 |
| BseRI | GAGGAG | 3 cut(s) | 57, 1010, 1776 |
| BseXI | GCAGC | 5 cut(s) | 236, 668, 1867, 1991, 2103 |
| BsgI | GTGCAG | 3 cut(s) | 44, 675, 1874 |
| Bsh1236I | CGCG | 1 cut(s) | 147 |
| Bsh1285I | CGRYCG | 1 cut(s) | 127 |
| BshFI | GGCC | 5 cut(s) | 36, 338, 386, 874, 2053 |
| BshNI | GGYRCC | 1 cut(s) | 547 |
| BsiEI | CGRYCG | 1 cut(s) | 127 |
| BsiSI | CCGG | 1 cut(s) | 769 |
| BslFI | GGGAC | 1 cut(s) | 65 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 295, 828 |
| BsmAI | GTCTC | 2 cut(s) | 1058, 1749 |
| BsmFI | GGGAC | 1 cut(s) | 65 |
| BsmI | GAATGC | 1 cut(s) | 787 |
| BsnI | GGCC | 5 cut(s) | 36, 338, 386, 874, 2053 |
| Bsp119I | TTCGAA | 2 cut(s) | 250, 511 |
| Bsp1407I | TGTACA | 1 cut(s) | 2108 |
| Bsp143I | GATC | 8 cut(s) | 106, 157, 405, 561, 1129, 1269, 1703, 1708 |
| Bsp19I | CCATGG | 1 cut(s) | 1675 |
| BspACI | CCGC | 2 cut(s) | 48, 1812 |
| BspANI | GGCC | 5 cut(s) | 36, 338, 386, 874, 2053 |
| BspCNI | CTCAG | 3 cut(s) | 28, 1944, 2041 |
| BspFNI | CGCG | 1 cut(s) | 147 |
| BspHI | TCATGA | 1 cut(s) | 1159 |
| BspLI | GGNNCC | 5 cut(s) | 78, 300, 549, 937, 2073 |
| BspMAI | CTGCAG | 1 cut(s) | 2121 |
| BspPI | GGATC | 1 cut(s) | 569 |
| BspT104I | TTCGAA | 2 cut(s) | 250, 511 |
| BspT107I | GGYRCC | 1 cut(s) | 547 |
| BspTI | CTTAAG | 1 cut(s) | 1526 |
| BsrDI | GCAATG | 1 cut(s) | 782 |
| BsrGI | TGTACA | 1 cut(s) | 2108 |
| BsrI | ACTGG | 1 cut(s) | 900 |
| BssECI | CCNNGG | 8 cut(s) | 37, 473, 612, 939, 1242, 1645, 1675, 1970 |
| BssMI | GATC | 8 cut(s) | 106, 157, 405, 561, 1129, 1269, 1703, 1708 |
| BssNAI | GTATAC | 1 cut(s) | 708 |
| BssT1I | CCWWGG | 4 cut(s) | 473, 612, 939, 1675 |
| Bst1107I | GTATAC | 1 cut(s) | 708 |
| Bst2UI | CCWGG | 2 cut(s) | 38, 1972 |
| Bst4CI | ACNGT | 4 cut(s) | 128, 1127, 1298, 2108 |
| Bst6I | CTCTTC | 3 cut(s) | 821, 876, 1337 |
| BstAFI | CTTAAG | 1 cut(s) | 1526 |
| BstAUI | TGTACA | 1 cut(s) | 2108 |
| BstBI | TTCGAA | 2 cut(s) | 250, 511 |
| BstC8I | GCNNGC | 2 cut(s) | 143, 2055 |
| BstDEI | CTNAG | 8 cut(s) | 15, 212, 315, 402, 969, 1759, 1931, 2028 |
| BstDSI | CCRYGG | 1 cut(s) | 1675 |
| BstEII | GGTNACC | 1 cut(s) | 1358 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 826 |
| BstF5I | GGATG | 4 cut(s) | 489, 1194, 1288, 1527 |
| BstFNI | CGCG | 1 cut(s) | 147 |
| BstHHI | GCGC | 1 cut(s) | 147 |
| BstKTI | GATC | 8 cut(s) | 109, 160, 408, 564, 1132, 1272, 1706, 1711 |
| BstMAI | GTCTC | 2 cut(s) | 1058, 1749 |
| BstMBI | GATC | 8 cut(s) | 106, 157, 405, 561, 1129, 1269, 1703, 1708 |
| BstMCI | CGRYCG | 1 cut(s) | 127 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1680, 2012 |
| BstNI | CCWGG | 2 cut(s) | 38, 1972 |
| BstNSI | RCATGY | 3 cut(s) | 145, 698, 1644 |
| BstPI | GGTNACC | 1 cut(s) | 1358 |
| BstSCI | CCNGG | 3 cut(s) | 36, 768, 1970 |
| BstSFI | CTRYAG | 3 cut(s) | 450, 1236, 2117 |
| BstUI | CGCG | 1 cut(s) | 147 |
| BstV1I | GCAGC | 5 cut(s) | 236, 668, 1867, 1991, 2103 |
| BstV2I | GAAGAC | 3 cut(s) | 574, 1202, 1748 |
| BstZ17I | GTATAC | 1 cut(s) | 708 |
| BsuRI | GGCC | 5 cut(s) | 36, 338, 386, 874, 2053 |
| BtgI | CCRYGG | 1 cut(s) | 1675 |
| BtsCI | GGATG | 4 cut(s) | 489, 1194, 1288, 1527 |
| BtsI | GCAGTG | 2 cut(s) | 408, 863 |
| BtsIMutI | CAGTG | 4 cut(s) | 408, 863, 907, 1143 |
| Cac8I | GCNNGC | 2 cut(s) | 143, 2055 |
| CciI | TCATGA | 1 cut(s) | 1159 |
| CfoI | GCGC | 1 cut(s) | 147 |
| Cfr13I | GGNCC | 2 cut(s) | 337, 872 |
| CseI | GACGC | 1 cut(s) | 136 |
| Csp6I | GTAC | 3 cut(s) | 2019, 2096, 2109 |
| CviQI | GTAC | 3 cut(s) | 2019, 2096, 2109 |
| DdeI | CTNAG | 8 cut(s) | 15, 212, 315, 402, 969, 1759, 1931, 2028 |
| DpnI | GATC | 8 cut(s) | 108, 159, 407, 563, 1131, 1271, 1705, 1710 |
| DpnII | GATC | 8 cut(s) | 106, 157, 405, 561, 1129, 1269, 1703, 1708 |
| DraI | TTTAAA | 1 cut(s) | 1035 |
| EaeI | YGGCCR | 1 cut(s) | 34 |
| Eam1104I | CTCTTC | 3 cut(s) | 821, 876, 1337 |
| EarI | CTCTTC | 3 cut(s) | 821, 876, 1337 |
| Eco130I | CCWWGG | 4 cut(s) | 473, 612, 939, 1675 |
| Eco147I | AGGCCT | 1 cut(s) | 2053 |
| Eco32I | GATATC | 1 cut(s) | 676 |
| Eco57I | CTGAAG | 3 cut(s) | 207, 1329, 1986 |
| Eco91I | GGTNACC | 1 cut(s) | 1358 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 826 |
| EcoO109I | RGGNCCY | 1 cut(s) | 872 |
| EcoO65I | GGTNACC | 1 cut(s) | 1358 |
| EcoRII | CCWGG | 2 cut(s) | 36, 1970 |
| EcoRV | GATATC | 1 cut(s) | 676 |
| EcoT14I | CCWWGG | 4 cut(s) | 473, 612, 939, 1675 |
| EcoT22I | ATGCAT | 1 cut(s) | 1278 |
| ErhI | CCWWGG | 4 cut(s) | 473, 612, 939, 1675 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 923, 955 |
| FaqI | GGGAC | 1 cut(s) | 65 |
| FauI | CCCGC | 1 cut(s) | 41 |
| FbaI | TGATCA | 2 cut(s) | 157, 1129 |
| FblI | GTMKAC | 2 cut(s) | 90, 707 |
| Fnu4HI | GCNGC | 5 cut(s) | 225, 657, 1856, 1980, 2117 |
| FokI | GGATG | 4 cut(s) | 476, 1201, 1295, 1534 |
| Fsp4HI | GCNGC | 5 cut(s) | 225, 657, 1856, 1980, 2117 |
| FspBI | CTAG | 1 cut(s) | 321 |
| GlaI | GCGC | 1 cut(s) | 146 |
| GluI | GCNGC | 5 cut(s) | 225, 657, 1856, 1980, 2117 |
| HaeIII | GGCC | 5 cut(s) | 36, 338, 386, 874, 2053 |
| HapII | CCGG | 1 cut(s) | 769 |
| HgaI | GACGC | 1 cut(s) | 136 |
| HhaI | GCGC | 1 cut(s) | 147 |
| Hin6I | GCGC | 1 cut(s) | 145 |
| HinP1I | GCGC | 1 cut(s) | 145 |
| HindIII | AAGCTT | 1 cut(s) | 573 |
| HpaII | CCGG | 1 cut(s) | 769 |
| HphI | GGTGA | 2 cut(s) | 88, 1836 |
| Hpy166II | GTNNAC | 5 cut(s) | 91, 708, 1123, 1469, 1602 |
| Hpy188III | TCNNGA | 3 cut(s) | 500, 1133, 1160 |
| Hpy8I | GTNNAC | 5 cut(s) | 91, 708, 1123, 1469, 1602 |
| Hpy99I | CGWCG | 2 cut(s) | 125, 152 |
| HpyAV | CCTTC | 8 cut(s) | 592, 904, 925, 938, 1714, 1822, 2034, 2043 |
| HpyCH4III | ACNGT | 4 cut(s) | 128, 1127, 1298, 2108 |
| HpyCH4IV | ACGT | 1 cut(s) | 716 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1680, 2012 |
| HpyF3I | CTNAG | 8 cut(s) | 15, 212, 315, 402, 969, 1759, 1931, 2028 |
| HpySE526I | ACGT | 1 cut(s) | 716 |
| HspAI | GCGC | 1 cut(s) | 145 |
| Ksp22I | TGATCA | 2 cut(s) | 157, 1129 |
| Kzo9I | GATC | 8 cut(s) | 106, 157, 405, 561, 1129, 1269, 1703, 1708 |
| LmnI | GCTCC | 6 cut(s) | 82, 304, 997, 1091, 1727, 2071 |
| Lsp1109I | GCAGC | 5 cut(s) | 236, 668, 1867, 1991, 2103 |
| LweI | GCATC | 3 cut(s) | 361, 1512, 2134 |
| MaeI | CTAG | 1 cut(s) | 321 |
| MaeII | ACGT | 1 cut(s) | 716 |
| MaeIII | GTNAC | 2 cut(s) | 1358, 1842 |
| MalI | GATC | 8 cut(s) | 108, 159, 407, 563, 1131, 1271, 1705, 1710 |
| MboI | GATC | 8 cut(s) | 106, 157, 405, 561, 1129, 1269, 1703, 1708 |
| MfeI | CAATTG | 1 cut(s) | 743 |
| MluCI | AATT | 3 cut(s) | 176, 743, 1653 |
| MlyI | GAGTC | 3 cut(s) | 176, 1577, 1777 |
| Mph1103I | ATGCAT | 1 cut(s) | 1278 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1018, 1410 |
| MseI | TTAA | 5 cut(s) | 243, 429, 1034, 1178, 1527 |
| MslI | CAYNNNNRTG | 4 cut(s) | 625, 1263, 1281, 1617 |
| MspCI | CTTAAG | 1 cut(s) | 1526 |
| MspI | CCGG | 1 cut(s) | 769 |
| MspR9I | CCNGG | 3 cut(s) | 38, 770, 1972 |
| MunI | CAATTG | 1 cut(s) | 743 |
| Mva1269I | GAATGC | 1 cut(s) | 787 |
| MvaI | CCWGG | 2 cut(s) | 38, 1972 |
| MvnI | CGCG | 1 cut(s) | 147 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1680, 2012 |
| NciI | CCSGG | 1 cut(s) | 770 |
| NcoI | CCATGG | 1 cut(s) | 1675 |
| NdeII | GATC | 8 cut(s) | 106, 157, 405, 561, 1129, 1269, 1703, 1708 |
| NlaIV | GGNNCC | 5 cut(s) | 78, 300, 549, 937, 2073 |
| NmuCI | GTSAC | 1 cut(s) | 1842 |
| NsiI | ATGCAT | 1 cut(s) | 1278 |
| NspI | RCATGY | 3 cut(s) | 145, 698, 1644 |
| NspV | TTCGAA | 2 cut(s) | 250, 511 |
| PaeI | GCATGC | 1 cut(s) | 145 |
| PagI | TCATGA | 1 cut(s) | 1159 |
| PceI | AGGCCT | 1 cut(s) | 2053 |
| PciI | ACATGT | 1 cut(s) | 694 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 60, 69 |
| PctI | GAATGC | 1 cut(s) | 787 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1018, 1410 |
| PfeI | GAWTC | 7 cut(s) | 779, 896, 965, 1025, 1042, 1112, 1411 |
| PkrI | GCNGC | 5 cut(s) | 226, 658, 1857, 1981, 2118 |
| PleI | GAGTC | 3 cut(s) | 176, 1577, 1777 |
| PpsI | GAGTC | 3 cut(s) | 176, 1577, 1777 |
| PscI | ACATGT | 1 cut(s) | 694 |
| Psp6I | CCWGG | 2 cut(s) | 36, 1970 |
| PspEI | GGTNACC | 1 cut(s) | 1358 |
| PspGI | CCWGG | 2 cut(s) | 36, 1970 |
| PspN4I | GGNNCC | 5 cut(s) | 78, 300, 549, 937, 2073 |
| PspPI | GGNCC | 2 cut(s) | 337, 872 |
| PstI | CTGCAG | 1 cut(s) | 2121 |
| RsaI | GTAC | 3 cut(s) | 2020, 2097, 2110 |
| RsaNI | GTAC | 3 cut(s) | 2019, 2096, 2109 |
| RseI | CAYNNNNRTG | 4 cut(s) | 625, 1263, 1281, 1617 |
| SaqAI | TTAA | 5 cut(s) | 243, 429, 1034, 1178, 1527 |
| SatI | GCNGC | 5 cut(s) | 225, 657, 1856, 1980, 2117 |
| Sau3AI | GATC | 8 cut(s) | 106, 157, 405, 561, 1129, 1269, 1703, 1708 |
| Sau96I | GGNCC | 2 cut(s) | 337, 872 |
| SchI | GAGTC | 3 cut(s) | 176, 1577, 1777 |
| ScrFI | CCNGG | 3 cut(s) | 38, 770, 1972 |
| SfaNI | GCATC | 3 cut(s) | 361, 1512, 2134 |
| SfcI | CTRYAG | 3 cut(s) | 450, 1236, 2117 |
| SfuI | TTCGAA | 2 cut(s) | 250, 511 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 625, 1263, 1281, 1617 |
| SmlI | CTYRAG | 3 cut(s) | 1449, 1526, 1565 |
| SmoI | CTYRAG | 3 cut(s) | 1449, 1526, 1565 |
| SphI | GCATGC | 1 cut(s) | 145 |
| Sse9I | AATT | 3 cut(s) | 176, 743, 1653 |
| SseBI | AGGCCT | 1 cut(s) | 2053 |
| SsiI | CCGC | 2 cut(s) | 48, 1812 |
| SspMI | CTAG | 1 cut(s) | 321 |
| StuI | AGGCCT | 1 cut(s) | 2053 |
| StyD4I | CCNGG | 3 cut(s) | 36, 768, 1970 |
| StyI | CCWWGG | 4 cut(s) | 473, 612, 939, 1675 |
| TaaI | ACNGT | 4 cut(s) | 128, 1127, 1298, 2108 |
| TaiI | ACGT | 1 cut(s) | 719 |
| TaqI | TCGA | 3 cut(s) | 72, 250, 511 |
| TasI | AATT | 3 cut(s) | 176, 743, 1653 |
| TatI | WGTACW | 1 cut(s) | 2108 |
| TfiI | GAWTC | 7 cut(s) | 779, 896, 965, 1025, 1042, 1112, 1411 |
| Tru1I | TTAA | 5 cut(s) | 243, 429, 1034, 1178, 1527 |
| Tru9I | TTAA | 5 cut(s) | 243, 429, 1034, 1178, 1527 |
| TscAI | CASTG | 4 cut(s) | 415, 863, 907, 1150 |
| TseFI | GTSAC | 1 cut(s) | 1842 |
| TseI | GCWGC | 5 cut(s) | 224, 656, 1855, 1979, 2116 |
| Tsp45I | GTSAC | 1 cut(s) | 1842 |
| TspDTI | ATGAA | 9 cut(s) | 183, 609, 677, 771, 894, 923, 1176, 1527, 1544 |
| TspGWI | ACGGA | 2 cut(s) | 1295, 1780 |
| TspRI | CASTG | 4 cut(s) | 415, 863, 907, 1150 |
| Vha464I | CTTAAG | 1 cut(s) | 1526 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 826 |
| XceI | RCATGY | 3 cut(s) | 145, 698, 1644 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 541 |
| XmiI | GTMKAC | 2 cut(s) | 90, 707 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1018, 1410 |
| XspI | CTAG | 1 cut(s) | 321 |
| Zsp2I | ATGCAT | 1 cut(s) | 1278 |