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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G17000 AT4G17000 AT4G17000 |
| fragaria_vesca | FvH4_2g02560 FvH4_2g02560 FvH4_2g02560 FvH4_2g02560 FvH4_2g02560 |
| malus_domestica | MD05G1112300.v1.1 MD10G1114900.v1.1 |
| prunus_persica | Prupe.8G156900_v2.0.a1 Prupe.8G157000_v2.0.a1 |
| pyrus_communis | pycom02g05590 pycom05g07390 pycom05g10780 pycom07g10710 pycom12g10280 pycom16g18860 |
| rosa_chinensis | RchiOBHm_Chr6g0246371 RchiOBHm_Chr6g0246451 RchiOBHm_Chr6g0246631 RchiOBHm_Chr6g0246641 |
| rosa_laevigata | RLG00000000929 RLG00000015260 |
| rosa_multiflora | Rmu_sc0001066.1_g000005 Rmu_sc0008965.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00214640 |
| rosa_rugosa | Rorug05G0520500 |
| rosa_samantha | Rh6AG034800 Rh6AG035100 Rh6BG029900 Rh6CG030300 Rh6DG029200 |
| rosa_wichuraiana | Rw6G002820 Rw6G002980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 448 |
| Acc16I | TGCGCA | 1 cut(s) | 2029 |
| AccBSI | CCGCTC | 1 cut(s) | 625 |
| AccI | GTMKAC | 1 cut(s) | 979 |
| AciI | CCGC | 6 cut(s) | 36, 48, 110, 625, 1914, 1941 |
| AclWI | GGATC | 2 cut(s) | 64, 857 |
| AcoI | YGGCCR | 2 cut(s) | 37, 261 |
| AcsI | RAATTY | 2 cut(s) | 493, 645 |
| AcuI | CTGAAG | 4 cut(s) | 207, 551, 1074, 1478 |
| AdeI | CACNNNGTG | 1 cut(s) | 875 |
| AfaI | GTAC | 4 cut(s) | 131, 937, 1746, 2016 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 126, 1907, 1956, 2031 |
| AflII | CTTAAG | 1 cut(s) | 1418 |
| AflIII | ACRYGT | 1 cut(s) | 691 |
| AgeI | ACCGGT | 1 cut(s) | 126 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1854 |
| AjnI | CCWGG | 6 cut(s) | 72, 804, 1483, 1569, 1844, 1955 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 923, 955 |
| AluBI | AGCT | 6 cut(s) | 299, 572, 656, 1317, 1634, 1861 |
| AluI | AGCT | 6 cut(s) | 299, 572, 656, 1317, 1634, 1861 |
| Alw26I | GTCTC | 2 cut(s) | 493, 1010 |
| AlwI | GGATC | 2 cut(s) | 64, 857 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 302, 1052, 1199 |
| Ama87I | CYCGRG | 1 cut(s) | 321 |
| AoxI | GGCC | 8 cut(s) | 37, 75, 261, 336, 557, 802, 1979, 2022 |
| ApeKI | GCWGC | 4 cut(s) | 224, 1328, 1783, 2035 |
| ApoI | RAATTY | 2 cut(s) | 493, 645 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 561, 593 |
| AsiGI | ACCGGT | 1 cut(s) | 126 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 504 |
| AspLEI | GCGC | 1 cut(s) | 2030 |
| AspS9I | GGNCC | 4 cut(s) | 76, 337, 544, 802 |
| AsuC2I | CCSGG | 2 cut(s) | 767, 1925 |
| AsuHPI | GGTGA | 4 cut(s) | 1001, 1040, 1360, 1764 |
| AsuII | TTCGAA | 2 cut(s) | 821, 1067 |
| AvaI | CYCGRG | 1 cut(s) | 321 |
| AvaII | GGWCC | 1 cut(s) | 544 |
| BalI | TGGCCA | 1 cut(s) | 263 |
| BanII | GRGCYC | 1 cut(s) | 1736 |
| BauI | CACGAG | 1 cut(s) | 873 |
| BbsI | GAAGAC | 1 cut(s) | 1652 |
| BbvI | GCAGC | 4 cut(s) | 236, 1315, 1795, 2022 |
| BccI | CCATC | 1 cut(s) | 358 |
| BceAI | ACGGC | 1 cut(s) | 697 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 130, 164 |
| BciT130I | CCWGG | 6 cut(s) | 74, 806, 1485, 1571, 1846, 1957 |
| BclI | TGATCA | 3 cut(s) | 157, 1228, 1339 |
| BcnI | CCSGG | 2 cut(s) | 767, 1925 |
| BcoDI | GTCTC | 2 cut(s) | 493, 1010 |
| BfrI | CTTAAG | 1 cut(s) | 1418 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 45 |
| BglII | AGATCT | 2 cut(s) | 405, 1790 |
| BisI | GCNGC | 5 cut(s) | 37, 225, 1329, 1784, 2036 |
| BlsI | GCNGC | 5 cut(s) | 38, 226, 1330, 1785, 2037 |
| Bme1390I | CCNGG | 8 cut(s) | 74, 767, 806, 1485, 1571, 1846, 1925, 1957 |
| Bme18I | GGWCC | 1 cut(s) | 544 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1854 |
| BmeT110I | CYCGRG | 1 cut(s) | 321 |
| BmgT120I | GGNCC | 4 cut(s) | 76, 337, 544, 802 |
| BmiI | GGNNCC | 5 cut(s) | 78, 521, 546, 1912, 1939 |
| BmrFI | CCNGG | 8 cut(s) | 74, 767, 806, 1485, 1571, 1846, 1925, 1957 |
| BmsI | GCATC | 3 cut(s) | 1252, 1404, 1685 |
| BpiI | GAAGAC | 1 cut(s) | 1652 |
| BpmI | CTGGAG | 2 cut(s) | 1467, 1828 |
| Bpu14I | TTCGAA | 2 cut(s) | 821, 1067 |
| BpuEI | CTTGAG | 2 cut(s) | 689, 715 |
| BpuMI | CCSGG | 2 cut(s) | 767, 1925 |
| BsaI | GGTCTC | 1 cut(s) | 1010 |
| BsaJI | CCNNGG | 7 cut(s) | 453, 609, 1484, 1540, 1569, 1570, 1923 |
| BsaWI | WCCGGW | 1 cut(s) | 126 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 126, 1907, 1956, 2031 |
| Bse118I | RCCGGY | 2 cut(s) | 126, 559 |
| Bse1I | ACTGG | 3 cut(s) | 137, 900, 1614 |
| Bse3DI | GCAATG | 1 cut(s) | 1342 |
| BseBI | CCWGG | 6 cut(s) | 74, 806, 1485, 1571, 1846, 1957 |
| BseDI | CCNNGG | 7 cut(s) | 453, 609, 1484, 1540, 1569, 1570, 1923 |
| BseGI | GGATG | 3 cut(s) | 158, 1419, 2017 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 126, 1907, 1956, 2031 |
| BseMI | GCAATG | 1 cut(s) | 1342 |
| BseMII | CTCAG | 3 cut(s) | 29, 983, 1728 |
| BseNI | ACTGG | 3 cut(s) | 137, 900, 1614 |
| BseXI | GCAGC | 4 cut(s) | 236, 1315, 1795, 2022 |
| BsgI | GTGCAG | 3 cut(s) | 852, 1802, 2021 |
| Bsh1285I | CGRYCG | 1 cut(s) | 127 |
| BshFI | GGCC | 8 cut(s) | 39, 77, 263, 338, 559, 804, 1981, 2024 |
| BshTI | ACCGGT | 1 cut(s) | 126 |
| BsiEI | CGRYCG | 1 cut(s) | 127 |
| BsiHKCI | CYCGRG | 1 cut(s) | 321 |
| BsiSI | CCGG | 4 cut(s) | 127, 560, 766, 1925 |
| BslFI | GGGAC | 4 cut(s) | 65, 530, 1492, 1587 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 126, 1907, 1956, 2031 |
| BsmAI | GTCTC | 2 cut(s) | 493, 1010 |
| BsmBI | CGTCTC | 1 cut(s) | 493 |
| BsmFI | GGGAC | 4 cut(s) | 65, 530, 1492, 1587 |
| BsnI | GGCC | 8 cut(s) | 39, 77, 263, 338, 559, 804, 1981, 2024 |
| Bso31I | GGTCTC | 1 cut(s) | 1010 |
| BsoBI | CYCGRG | 1 cut(s) | 321 |
| Bsp119I | TTCGAA | 2 cut(s) | 821, 1067 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1736 |
| BspACI | CCGC | 6 cut(s) | 36, 48, 110, 625, 1914, 1941 |
| BspANI | GGCC | 8 cut(s) | 39, 77, 263, 338, 559, 804, 1981, 2024 |
| BspCNI | CTCAG | 3 cut(s) | 28, 982, 1729 |
| BspLI | GGNNCC | 5 cut(s) | 78, 521, 546, 1912, 1939 |
| BspPI | GGATC | 2 cut(s) | 64, 857 |
| BspT104I | TTCGAA | 2 cut(s) | 821, 1067 |
| BspTI | CTTAAG | 1 cut(s) | 1418 |
| BspTNI | GGTCTC | 1 cut(s) | 1010 |
| BsrBI | CCGCTC | 1 cut(s) | 625 |
| BsrDI | GCAATG | 1 cut(s) | 1342 |
| BsrFI | RCCGGY | 2 cut(s) | 126, 559 |
| BsrI | ACTGG | 3 cut(s) | 137, 900, 1614 |
| BssAI | RCCGGY | 2 cut(s) | 126, 559 |
| BssECI | CCNNGG | 7 cut(s) | 453, 609, 1484, 1540, 1569, 1570, 1923 |
| BssSI | CACGAG | 1 cut(s) | 873 |
| BssT1I | CCWWGG | 3 cut(s) | 453, 609, 1540 |
| Bst2BI | CACGAG | 1 cut(s) | 873 |
| Bst2UI | CCWGG | 6 cut(s) | 74, 806, 1485, 1571, 1846, 1957 |
| Bst4CI | ACNGT | 5 cut(s) | 741, 1028, 1109, 1580, 1990 |
| Bst6I | CTCTTC | 6 cut(s) | 402, 818, 873, 1050, 1110, 1136 |
| BstAFI | CTTAAG | 1 cut(s) | 1418 |
| BstBI | TTCGAA | 2 cut(s) | 821, 1067 |
| BstC8I | GCNNGC | 5 cut(s) | 143, 1256, 1333, 1732, 2026 |
| BstDEI | CTNAG | 6 cut(s) | 15, 248, 721, 969, 1737, 1862 |
| BstF5I | GGATG | 3 cut(s) | 158, 1419, 2017 |
| BstHHI | GCGC | 1 cut(s) | 2030 |
| BstMAI | GTCTC | 2 cut(s) | 493, 1010 |
| BstMCI | CGRYCG | 1 cut(s) | 127 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 45, 269 |
| BstNI | CCWGG | 6 cut(s) | 74, 806, 1485, 1571, 1846, 1957 |
| BstNSI | RCATGY | 2 cut(s) | 145, 695 |
| BstSCI | CCNGG | 8 cut(s) | 72, 765, 804, 1483, 1569, 1844, 1923, 1955 |
| BstV1I | GCAGC | 4 cut(s) | 236, 1315, 1795, 2022 |
| BstV2I | GAAGAC | 1 cut(s) | 1652 |
| BstX2I | RGATCY | 3 cut(s) | 69, 405, 1790 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 574, 907 |
| BstYI | RGATCY | 3 cut(s) | 69, 405, 1790 |
| BsuRI | GGCC | 8 cut(s) | 39, 77, 263, 338, 559, 804, 1981, 2024 |
| BtsCI | GGATG | 3 cut(s) | 158, 1419, 2017 |
| BtsI | GCAGTG | 2 cut(s) | 1451, 1839 |
| BtsIMutI | CAGTG | 4 cut(s) | 907, 1451, 1576, 1839 |
| Cac8I | GCNNGC | 5 cut(s) | 143, 1256, 1333, 1732, 2026 |
| CaiI | CAGNNNCTG | 3 cut(s) | 302, 1052, 1199 |
| CfoI | GCGC | 1 cut(s) | 2030 |
| Cfr10I | RCCGGY | 2 cut(s) | 126, 559 |
| Cfr13I | GGNCC | 4 cut(s) | 76, 337, 544, 802 |
| Csp6I | GTAC | 4 cut(s) | 130, 936, 1745, 2015 |
| CspAI | ACCGGT | 1 cut(s) | 126 |
| CviAII | CATG | 8 cut(s) | 142, 167, 692, 835, 907, 955, 1259, 1448 |
| CviQI | GTAC | 4 cut(s) | 130, 936, 1745, 2015 |
| DdeI | CTNAG | 6 cut(s) | 15, 248, 721, 969, 1737, 1862 |
| DraIII | CACNNNGTG | 1 cut(s) | 875 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 448 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1854 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 448 |
| EaeI | YGGCCR | 2 cut(s) | 37, 261 |
| Eam1104I | CTCTTC | 6 cut(s) | 402, 818, 873, 1050, 1110, 1136 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1854 |
| EarI | CTCTTC | 6 cut(s) | 402, 818, 873, 1050, 1110, 1136 |
| Eco130I | CCWWGG | 3 cut(s) | 453, 609, 1540 |
| Eco147I | AGGCCT | 2 cut(s) | 1981, 2024 |
| Eco24I | GRGCYC | 1 cut(s) | 1736 |
| Eco31I | GGTCTC | 1 cut(s) | 1010 |
| Eco47I | GGWCC | 1 cut(s) | 544 |
| Eco57I | CTGAAG | 4 cut(s) | 207, 551, 1074, 1478 |
| Eco88I | CYCGRG | 1 cut(s) | 321 |
| EcoO109I | RGGNCCY | 1 cut(s) | 76 |
| EcoRII | CCWGG | 6 cut(s) | 72, 804, 1483, 1569, 1844, 1955 |
| EcoT14I | CCWWGG | 3 cut(s) | 453, 609, 1540 |
| EcoT38I | GRGCYC | 1 cut(s) | 1736 |
| ErhI | CCWWGG | 3 cut(s) | 453, 609, 1540 |
| Esp3I | CGTCTC | 1 cut(s) | 493 |
| FaeI | CATG | 8 cut(s) | 145, 170, 695, 838, 910, 958, 1262, 1451 |
| FaqI | GGGAC | 4 cut(s) | 65, 530, 1492, 1587 |
| FatI | CATG | 8 cut(s) | 141, 166, 691, 834, 906, 954, 1258, 1447 |
| FauI | CCCGC | 2 cut(s) | 41, 117 |
| FbaI | TGATCA | 3 cut(s) | 157, 1228, 1339 |
| FblI | GTMKAC | 1 cut(s) | 979 |
| Fnu4HI | GCNGC | 5 cut(s) | 37, 225, 1329, 1784, 2036 |
| FokI | GGATG | 3 cut(s) | 165, 1426, 2024 |
| FriOI | GRGCYC | 1 cut(s) | 1736 |
| Fsp4HI | GCNGC | 5 cut(s) | 37, 225, 1329, 1784, 2036 |
| FspI | TGCGCA | 1 cut(s) | 2029 |
| GlaI | GCGC | 1 cut(s) | 2029 |
| GluI | GCNGC | 5 cut(s) | 37, 225, 1329, 1784, 2036 |
| GsuI | CTGGAG | 2 cut(s) | 1467, 1828 |
| HaeIII | GGCC | 8 cut(s) | 39, 77, 263, 338, 559, 804, 1981, 2024 |
| HapII | CCGG | 4 cut(s) | 127, 560, 766, 1925 |
| HhaI | GCGC | 1 cut(s) | 2030 |
| Hin1II | CATG | 8 cut(s) | 145, 170, 695, 838, 910, 958, 1262, 1451 |
| Hin6I | GCGC | 1 cut(s) | 2028 |
| HinP1I | GCGC | 1 cut(s) | 2028 |
| HpaII | CCGG | 4 cut(s) | 127, 560, 766, 1925 |
| HphI | GGTGA | 4 cut(s) | 1001, 1040, 1360, 1764 |
| Hpy166II | GTNNAC | 4 cut(s) | 980, 1497, 1553, 1747 |
| Hpy188III | TCNNGA | 5 cut(s) | 732, 875, 1477, 1887, 1968 |
| Hpy8I | GTNNAC | 4 cut(s) | 980, 1497, 1553, 1747 |
| Hpy99I | CGWCG | 1 cut(s) | 125 |
| HpyCH4III | ACNGT | 5 cut(s) | 741, 1028, 1109, 1580, 1990 |
| HpyCH4IV | ACGT | 2 cut(s) | 1555, 1699 |
| HpyCH4V | TGCA | 8 cut(s) | 141, 305, 413, 798, 869, 1451, 1783, 2038 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 45, 269 |
| HpyF3I | CTNAG | 6 cut(s) | 15, 248, 721, 969, 1737, 1862 |
| HpySE526I | ACGT | 2 cut(s) | 1555, 1699 |
| Hsp92II | CATG | 8 cut(s) | 145, 170, 695, 838, 910, 958, 1262, 1451 |
| HspAI | GCGC | 1 cut(s) | 2028 |
| Ksp22I | TGATCA | 3 cut(s) | 157, 1228, 1339 |
| LmnI | GCTCC | 4 cut(s) | 304, 622, 1322, 1631 |
| Lsp1109I | GCAGC | 4 cut(s) | 236, 1315, 1795, 2022 |
| LweI | GCATC | 3 cut(s) | 1252, 1404, 1685 |
| MaeII | ACGT | 2 cut(s) | 1555, 1699 |
| MaeIII | GTNAC | 4 cut(s) | 902, 1275, 1684, 1795 |
| MbiI | CCGCTC | 1 cut(s) | 625 |
| MflI | RGATCY | 3 cut(s) | 69, 405, 1790 |
| MhlI | GDGCHC | 1 cut(s) | 1736 |
| MlsI | TGGCCA | 1 cut(s) | 263 |
| MluCI | AATT | 8 cut(s) | 176, 192, 493, 645, 793, 1075, 1534, 2071 |
| MluNI | TGGCCA | 1 cut(s) | 263 |
| MlyI | GAGTC | 5 cut(s) | 156, 176, 1474, 1997, 2045 |
| MmeI | TCCRAC | 2 cut(s) | 129, 130 |
| Mox20I | TGGCCA | 1 cut(s) | 263 |
| MroXI | GAANNNNTTC | 1 cut(s) | 504 |
| MscI | TGGCCA | 1 cut(s) | 263 |
| MseI | TTAA | 3 cut(s) | 426, 1130, 1419 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1512 |
| Msp20I | TGGCCA | 1 cut(s) | 263 |
| MspCI | CTTAAG | 1 cut(s) | 1418 |
| MspI | CCGG | 4 cut(s) | 127, 560, 766, 1925 |
| MspR9I | CCNGG | 8 cut(s) | 74, 767, 806, 1485, 1571, 1846, 1925, 1957 |
| MvaI | CCWGG | 6 cut(s) | 74, 806, 1485, 1571, 1846, 1957 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 45, 269 |
| NciI | CCSGG | 2 cut(s) | 767, 1925 |
| NlaIII | CATG | 8 cut(s) | 145, 170, 695, 838, 910, 958, 1262, 1451 |
| NlaIV | GGNNCC | 5 cut(s) | 78, 521, 546, 1912, 1939 |
| NmeAIII | GCCGAG | 1 cut(s) | 1230 |
| NmuCI | GTSAC | 2 cut(s) | 902, 1795 |
| NsbI | TGCGCA | 1 cut(s) | 2029 |
| NspI | RCATGY | 2 cut(s) | 145, 695 |
| NspV | TTCGAA | 2 cut(s) | 821, 1067 |
| PaeI | GCATGC | 1 cut(s) | 145 |
| PaeR7I | CTCGAG | 1 cut(s) | 321 |
| PasI | CCCWGGG | 1 cut(s) | 1570 |
| PceI | AGGCCT | 2 cut(s) | 1981, 2024 |
| PciI | ACATGT | 1 cut(s) | 691 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 60 |
| PdmI | GAANNNNTTC | 1 cut(s) | 504 |
| PfeI | GAWTC | 6 cut(s) | 101, 776, 896, 994, 1064, 1303 |
| PfoI | TCCNGGA | 1 cut(s) | 1844 |
| PinAI | ACCGGT | 1 cut(s) | 126 |
| PkrI | GCNGC | 5 cut(s) | 38, 226, 1330, 1785, 2037 |
| PleI | GAGTC | 5 cut(s) | 155, 176, 1474, 1997, 2045 |
| PpsI | GAGTC | 5 cut(s) | 155, 176, 1474, 1997, 2045 |
| PscI | ACATGT | 1 cut(s) | 691 |
| Psp6I | CCWGG | 6 cut(s) | 72, 804, 1483, 1569, 1844, 1955 |
| PspGI | CCWGG | 6 cut(s) | 72, 804, 1483, 1569, 1844, 1955 |
| PspN4I | GGNNCC | 5 cut(s) | 78, 521, 546, 1912, 1939 |
| PspPI | GGNCC | 4 cut(s) | 76, 337, 544, 802 |
| PspXI | VCTCGAGB | 1 cut(s) | 321 |
| PstNI | CAGNNNCTG | 3 cut(s) | 302, 1052, 1199 |
| PsuI | RGATCY | 3 cut(s) | 69, 405, 1790 |
| RsaI | GTAC | 4 cut(s) | 131, 937, 1746, 2016 |
| RsaNI | GTAC | 4 cut(s) | 130, 936, 1745, 2015 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1512 |
| SaqAI | TTAA | 3 cut(s) | 426, 1130, 1419 |
| SatI | GCNGC | 5 cut(s) | 37, 225, 1329, 1784, 2036 |
| Sau96I | GGNCC | 4 cut(s) | 76, 337, 544, 802 |
| SchI | GAGTC | 5 cut(s) | 156, 176, 1474, 1997, 2045 |
| ScrFI | CCNGG | 8 cut(s) | 74, 767, 806, 1485, 1571, 1846, 1925, 1957 |
| SduI | GDGCHC | 1 cut(s) | 1736 |
| SfaNI | GCATC | 3 cut(s) | 1252, 1404, 1685 |
| Sfr274I | CTCGAG | 1 cut(s) | 321 |
| SfuI | TTCGAA | 2 cut(s) | 821, 1067 |
| SinI | GGWCC | 1 cut(s) | 544 |
| SlaI | CTCGAG | 1 cut(s) | 321 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1512 |
| SmlI | CTYRAG | 4 cut(s) | 321, 668, 730, 1418 |
| SmoI | CTYRAG | 4 cut(s) | 321, 668, 730, 1418 |
| SphI | GCATGC | 1 cut(s) | 145 |
| Sse9I | AATT | 8 cut(s) | 176, 192, 493, 645, 793, 1075, 1534, 2071 |
| SseBI | AGGCCT | 2 cut(s) | 1981, 2024 |
| SsiI | CCGC | 6 cut(s) | 36, 48, 110, 625, 1914, 1941 |
| StuI | AGGCCT | 2 cut(s) | 1981, 2024 |
| StyD4I | CCNGG | 8 cut(s) | 72, 765, 804, 1483, 1569, 1844, 1923, 1955 |
| StyI | CCWWGG | 3 cut(s) | 453, 609, 1540 |
| TaaI | ACNGT | 5 cut(s) | 741, 1028, 1109, 1580, 1990 |
| TaiI | ACGT | 2 cut(s) | 1558, 1702 |
| TaqI | TCGA | 3 cut(s) | 322, 821, 1067 |
| TasI | AATT | 8 cut(s) | 176, 192, 493, 645, 793, 1075, 1534, 2071 |
| TatI | WGTACW | 1 cut(s) | 1744 |
| TauI | GCSGC | 1 cut(s) | 39 |
| TfiI | GAWTC | 6 cut(s) | 101, 776, 896, 994, 1064, 1303 |
| Tru1I | TTAA | 3 cut(s) | 426, 1130, 1419 |
| Tru9I | TTAA | 3 cut(s) | 426, 1130, 1419 |
| TscAI | CASTG | 4 cut(s) | 907, 1458, 1583, 1839 |
| TseFI | GTSAC | 2 cut(s) | 902, 1795 |
| TseI | GCWGC | 4 cut(s) | 224, 1328, 1783, 2035 |
| Tsp45I | GTSAC | 2 cut(s) | 902, 1795 |
| TspDTI | ATGAA | 9 cut(s) | 183, 389, 674, 1128, 1419, 1436, 1640, 1872, 2076 |
| TspGWI | ACGGA | 1 cut(s) | 1816 |
| TspRI | CASTG | 4 cut(s) | 907, 1458, 1583, 1839 |
| Vha464I | CTTAAG | 1 cut(s) | 1418 |
| VpaK11BI | GGWCC | 1 cut(s) | 544 |
| XapI | RAATTY | 2 cut(s) | 493, 645 |
| XceI | RCATGY | 2 cut(s) | 145, 695 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 616 |
| XhoI | CTCGAG | 1 cut(s) | 321 |
| XmiI | GTMKAC | 1 cut(s) | 979 |
| XmnI | GAANNNNTTC | 1 cut(s) | 504 |