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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G17000 AT4G17000 AT4G17000 |
| fragaria_vesca | FvH4_2g02560 FvH4_2g02560 FvH4_2g02560 FvH4_2g02560 FvH4_2g02560 |
| malus_domestica | MD05G1112300.v1.1 MD10G1114900.v1.1 |
| prunus_persica | Prupe.8G156900_v2.0.a1 Prupe.8G157000_v2.0.a1 |
| pyrus_communis | pycom02g05590 pycom05g07390 pycom05g10780 pycom07g10710 pycom12g10280 pycom16g18860 |
| rosa_chinensis | RchiOBHm_Chr6g0246371 RchiOBHm_Chr6g0246451 RchiOBHm_Chr6g0246631 RchiOBHm_Chr6g0246641 |
| rosa_laevigata | RLG00000000929 RLG00000015260 |
| rosa_multiflora | Rmu_sc0001066.1_g000005 Rmu_sc0008965.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00214640 |
| rosa_rugosa | Rorug05G0520500 |
| rosa_samantha | Rh6AG034800 Rh6AG035100 Rh6BG029900 Rh6CG030300 Rh6DG029200 |
| rosa_wichuraiana | Rw6G002820 Rw6G002980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 412 |
| AccI | GTMKAC | 1 cut(s) | 572 |
| AciI | CCGC | 1 cut(s) | 1590 |
| AclWI | GGATC | 2 cut(s) | 434, 755 |
| AcuI | CTGAAG | 3 cut(s) | 72, 1194, 1761 |
| AfaI | GTAC | 3 cut(s) | 1795, 1872, 1885 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 160, 693 |
| AflII | CTTAAG | 1 cut(s) | 1391 |
| AflIII | ACRYGT | 1 cut(s) | 559 |
| AhlI | ACTAGT | 1 cut(s) | 1307 |
| AjnI | CCWGG | 1 cut(s) | 1745 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 548, 580, 788, 820, 1030, 1062 |
| AluBI | AGCT | 8 cut(s) | 326, 440, 875, 941, 951, 1301, 1508, 1790 |
| AluI | AGCT | 8 cut(s) | 326, 440, 875, 941, 951, 1301, 1508, 1790 |
| Alw21I | GWGCWC | 1 cut(s) | 1315 |
| Alw26I | GTCTC | 1 cut(s) | 1527 |
| AlwI | GGATC | 2 cut(s) | 434, 755 |
| AoxI | GGCC | 5 cut(s) | 8, 201, 249, 737, 1826 |
| ApeKI | GCWGC | 6 cut(s) | 89, 521, 1301, 1633, 1754, 1891 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 883, 1275 |
| AspS9I | GGNCC | 2 cut(s) | 202, 737 |
| AsuC2I | CCSGG | 1 cut(s) | 635 |
| AsuHPI | GGTGA | 1 cut(s) | 1614 |
| AsuII | TTCGAA | 1 cut(s) | 115 |
| BanI | GGYRCC | 1 cut(s) | 412 |
| BbsI | GAAGAC | 2 cut(s) | 439, 1067 |
| Bbv12I | GWGCWC | 1 cut(s) | 1315 |
| BbvI | GCAGC | 6 cut(s) | 101, 533, 1288, 1645, 1766, 1878 |
| BccI | CCATC | 3 cut(s) | 316, 362, 1048 |
| BceAI | ACGGC | 1 cut(s) | 177 |
| BciT130I | CCWGG | 1 cut(s) | 1747 |
| BclI | TGATCA | 1 cut(s) | 22 |
| BcnI | CCSGG | 1 cut(s) | 635 |
| BcoDI | GTCTC | 1 cut(s) | 1527 |
| BcuI | ACTAGT | 1 cut(s) | 1307 |
| BfaI | CTAG | 2 cut(s) | 186, 1308 |
| BfmI | CTRYAG | 3 cut(s) | 315, 1101, 1892 |
| BfrI | CTTAAG | 1 cut(s) | 1391 |
| BisI | GCNGC | 6 cut(s) | 90, 522, 1302, 1634, 1755, 1892 |
| BlsI | GCNGC | 6 cut(s) | 91, 523, 1303, 1635, 1756, 1893 |
| Bme1390I | CCNGG | 2 cut(s) | 635, 1747 |
| BmgT120I | GGNCC | 2 cut(s) | 202, 737 |
| BmiI | GGNNCC | 4 cut(s) | 165, 414, 802, 1848 |
| BmrFI | CCNGG | 2 cut(s) | 635, 1747 |
| BmrI | ACTGGG | 1 cut(s) | 759 |
| BmsI | GCATC | 3 cut(s) | 226, 1377, 1906 |
| BmuI | ACTGGG | 1 cut(s) | 759 |
| BpiI | GAAGAC | 2 cut(s) | 439, 1067 |
| Bpu10I | CCTNAGC | 1 cut(s) | 5 |
| Bpu14I | TTCGAA | 1 cut(s) | 115 |
| BpuEI | CTTGAG | 2 cut(s) | 1299, 1415 |
| BpuMI | CCSGG | 1 cut(s) | 635 |
| BsaBI | GATNNNNATC | 1 cut(s) | 759 |
| BsaJI | CCNNGG | 5 cut(s) | 338, 477, 804, 1107, 1745 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 668, 698 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 160, 693 |
| Bse1I | ACTGG | 1 cut(s) | 765 |
| Bse3DI | GCAATG | 2 cut(s) | 581, 647 |
| Bse8I | GATNNNNATC | 1 cut(s) | 759 |
| BseBI | CCWGG | 1 cut(s) | 1747 |
| BseDI | CCNNGG | 5 cut(s) | 338, 477, 804, 1107, 1745 |
| BseGI | GGATG | 3 cut(s) | 1059, 1153, 1392 |
| BseJI | GATNNNNATC | 1 cut(s) | 759 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 160, 693 |
| BseMI | GCAATG | 2 cut(s) | 581, 647 |
| BseMII | CTCAG | 1 cut(s) | 1720 |
| BseNI | ACTGG | 1 cut(s) | 765 |
| BseRI | GAGGAG | 2 cut(s) | 875, 1554 |
| BseXI | GCAGC | 6 cut(s) | 101, 533, 1288, 1645, 1766, 1878 |
| BsgI | GTGCAG | 2 cut(s) | 540, 1652 |
| BshFI | GGCC | 5 cut(s) | 10, 203, 251, 739, 1828 |
| BshNI | GGYRCC | 1 cut(s) | 412 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1315 |
| BsiSI | CCGG | 1 cut(s) | 634 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 160, 693 |
| BsmAI | GTCTC | 1 cut(s) | 1527 |
| BsmI | GAATGC | 1 cut(s) | 652 |
| BsnI | GGCC | 5 cut(s) | 10, 203, 251, 739, 1828 |
| Bsp119I | TTCGAA | 1 cut(s) | 115 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1315 |
| Bsp1407I | TGTACA | 1 cut(s) | 1883 |
| Bsp143I | GATC | 5 cut(s) | 22, 270, 426, 760, 1134 |
| BspACI | CCGC | 1 cut(s) | 1590 |
| BspANI | GGCC | 5 cut(s) | 10, 203, 251, 739, 1828 |
| BspCNI | CTCAG | 1 cut(s) | 1719 |
| BspLI | GGNNCC | 4 cut(s) | 165, 414, 802, 1848 |
| BspMAI | CTGCAG | 1 cut(s) | 1896 |
| BspPI | GGATC | 2 cut(s) | 434, 755 |
| BspT104I | TTCGAA | 1 cut(s) | 115 |
| BspT107I | GGYRCC | 1 cut(s) | 412 |
| BspTI | CTTAAG | 1 cut(s) | 1391 |
| BsrDI | GCAATG | 2 cut(s) | 581, 647 |
| BsrGI | TGTACA | 1 cut(s) | 1883 |
| BsrI | ACTGG | 1 cut(s) | 765 |
| BssECI | CCNNGG | 5 cut(s) | 338, 477, 804, 1107, 1745 |
| BssMI | GATC | 5 cut(s) | 22, 270, 426, 760, 1134 |
| BssNAI | GTATAC | 1 cut(s) | 573 |
| BssT1I | CCWWGG | 3 cut(s) | 338, 477, 804 |
| Bst1107I | GTATAC | 1 cut(s) | 573 |
| Bst2UI | CCWGG | 1 cut(s) | 1747 |
| Bst4CI | ACNGT | 4 cut(s) | 992, 1163, 1764, 1883 |
| Bst6I | CTCTTC | 3 cut(s) | 686, 741, 1202 |
| BstAFI | CTTAAG | 1 cut(s) | 1391 |
| BstAUI | TGTACA | 1 cut(s) | 1883 |
| BstBI | TTCGAA | 1 cut(s) | 115 |
| BstC8I | GCNNGC | 1 cut(s) | 1830 |
| BstDEI | CTNAG | 5 cut(s) | 5, 180, 267, 1537, 1706 |
| BstEII | GGTNACC | 1 cut(s) | 1223 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 691 |
| BstF5I | GGATG | 3 cut(s) | 1059, 1153, 1392 |
| BstKTI | GATC | 5 cut(s) | 25, 273, 429, 763, 1137 |
| BstMAI | GTCTC | 1 cut(s) | 1527 |
| BstMBI | GATC | 5 cut(s) | 22, 270, 426, 760, 1134 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1310, 1787 |
| BstNI | CCWGG | 1 cut(s) | 1747 |
| BstNSI | RCATGY | 1 cut(s) | 563 |
| BstPI | GGTNACC | 1 cut(s) | 1223 |
| BstSCI | CCNGG | 2 cut(s) | 633, 1745 |
| BstSFI | CTRYAG | 3 cut(s) | 315, 1101, 1892 |
| BstV1I | GCAGC | 6 cut(s) | 101, 533, 1288, 1645, 1766, 1878 |
| BstV2I | GAAGAC | 2 cut(s) | 439, 1067 |
| BstZ17I | GTATAC | 1 cut(s) | 573 |
| BsuRI | GGCC | 5 cut(s) | 10, 203, 251, 739, 1828 |
| BtsCI | GGATG | 3 cut(s) | 1059, 1153, 1392 |
| BtsI | GCAGTG | 2 cut(s) | 273, 728 |
| BtsIMutI | CAGTG | 3 cut(s) | 273, 728, 772 |
| Cac8I | GCNNGC | 1 cut(s) | 1830 |
| Cfr13I | GGNCC | 2 cut(s) | 202, 737 |
| Csp6I | GTAC | 3 cut(s) | 1794, 1871, 1884 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1641, 1676 |
| CviAII | CATG | 9 cut(s) | 32, 526, 560, 1025, 1075, 1124, 1138, 1421, 1868 |
| CviQI | GTAC | 3 cut(s) | 1794, 1871, 1884 |
| DdeI | CTNAG | 5 cut(s) | 5, 180, 267, 1537, 1706 |
| DpnI | GATC | 5 cut(s) | 24, 272, 428, 762, 1136 |
| DpnII | GATC | 5 cut(s) | 22, 270, 426, 760, 1134 |
| DraI | TTTAAA | 1 cut(s) | 900 |
| Eam1104I | CTCTTC | 3 cut(s) | 686, 741, 1202 |
| EarI | CTCTTC | 3 cut(s) | 686, 741, 1202 |
| Eco130I | CCWWGG | 3 cut(s) | 338, 477, 804 |
| Eco147I | AGGCCT | 2 cut(s) | 10, 1828 |
| Eco32I | GATATC | 1 cut(s) | 541 |
| Eco57I | CTGAAG | 3 cut(s) | 72, 1194, 1761 |
| Eco91I | GGTNACC | 1 cut(s) | 1223 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 691 |
| EcoO109I | RGGNCCY | 1 cut(s) | 737 |
| EcoO65I | GGTNACC | 1 cut(s) | 1223 |
| EcoRII | CCWGG | 1 cut(s) | 1745 |
| EcoRV | GATATC | 1 cut(s) | 541 |
| EcoT14I | CCWWGG | 3 cut(s) | 338, 477, 804 |
| EcoT22I | ATGCAT | 1 cut(s) | 1143 |
| ErhI | CCWWGG | 3 cut(s) | 338, 477, 804 |
| FaeI | CATG | 9 cut(s) | 35, 529, 563, 1028, 1078, 1127, 1141, 1424, 1871 |
| FatI | CATG | 9 cut(s) | 31, 525, 559, 1024, 1074, 1123, 1137, 1420, 1867 |
| FbaI | TGATCA | 1 cut(s) | 22 |
| FblI | GTMKAC | 1 cut(s) | 572 |
| Fnu4HI | GCNGC | 6 cut(s) | 90, 522, 1302, 1634, 1755, 1892 |
| FokI | GGATG | 3 cut(s) | 1066, 1160, 1399 |
| Fsp4HI | GCNGC | 6 cut(s) | 90, 522, 1302, 1634, 1755, 1892 |
| FspBI | CTAG | 2 cut(s) | 186, 1308 |
| GluI | GCNGC | 6 cut(s) | 90, 522, 1302, 1634, 1755, 1892 |
| HaeIII | GGCC | 5 cut(s) | 10, 203, 251, 739, 1828 |
| HapII | CCGG | 1 cut(s) | 634 |
| Hin1II | CATG | 9 cut(s) | 35, 529, 563, 1028, 1078, 1127, 1141, 1424, 1871 |
| HindIII | AAGCTT | 1 cut(s) | 438 |
| HinfI | GANTC | 9 cut(s) | 47, 644, 830, 890, 907, 977, 1276, 1561, 1664 |
| HpaII | CCGG | 1 cut(s) | 634 |
| HphI | GGTGA | 1 cut(s) | 1614 |
| Hpy166II | GTNNAC | 4 cut(s) | 573, 988, 1334, 1467 |
| Hpy188III | TCNNGA | 2 cut(s) | 365, 1519 |
| Hpy8I | GTNNAC | 4 cut(s) | 573, 988, 1334, 1467 |
| HpyAV | CCTTC | 9 cut(s) | 457, 769, 803, 1492, 1600, 1809, 1818, 1870, 1891 |
| HpyCH4III | ACNGT | 4 cut(s) | 992, 1163, 1764, 1883 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1310, 1787 |
| HpyF3I | CTNAG | 5 cut(s) | 5, 180, 267, 1537, 1706 |
| Hsp92II | CATG | 9 cut(s) | 35, 529, 563, 1028, 1078, 1127, 1141, 1424, 1871 |
| Ksp22I | TGATCA | 1 cut(s) | 22 |
| Kzo9I | GATC | 5 cut(s) | 22, 270, 426, 760, 1134 |
| LmnI | GCTCC | 5 cut(s) | 169, 862, 956, 1505, 1846 |
| Lsp1109I | GCAGC | 6 cut(s) | 101, 533, 1288, 1645, 1766, 1878 |
| LweI | GCATC | 3 cut(s) | 226, 1377, 1906 |
| MaeI | CTAG | 2 cut(s) | 186, 1308 |
| MaeIII | GTNAC | 2 cut(s) | 1223, 1620 |
| MalI | GATC | 5 cut(s) | 24, 272, 428, 762, 1136 |
| MboI | GATC | 5 cut(s) | 22, 270, 426, 760, 1134 |
| MfeI | CAATTG | 1 cut(s) | 608 |
| MhlI | GDGCHC | 1 cut(s) | 1315 |
| MluCI | AATT | 3 cut(s) | 13, 41, 608 |
| MlyI | GAGTC | 2 cut(s) | 41, 1555 |
| Mph1103I | ATGCAT | 1 cut(s) | 1143 |
| MroXI | GAANNNNTTC | 2 cut(s) | 883, 1275 |
| MseI | TTAA | 5 cut(s) | 108, 294, 899, 1043, 1392 |
| MslI | CAYNNNNRTG | 5 cut(s) | 490, 1128, 1146, 1482, 1573 |
| MspA1I | CMGCKG | 1 cut(s) | 1301 |
| MspCI | CTTAAG | 1 cut(s) | 1391 |
| MspI | CCGG | 1 cut(s) | 634 |
| MspR9I | CCNGG | 2 cut(s) | 635, 1747 |
| MunI | CAATTG | 1 cut(s) | 608 |
| Mva1269I | GAATGC | 1 cut(s) | 652 |
| MvaI | CCWGG | 1 cut(s) | 1747 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1310, 1787 |
| NciI | CCSGG | 1 cut(s) | 635 |
| NdeII | GATC | 5 cut(s) | 22, 270, 426, 760, 1134 |
| NlaIII | CATG | 9 cut(s) | 35, 529, 563, 1028, 1078, 1127, 1141, 1424, 1871 |
| NlaIV | GGNNCC | 4 cut(s) | 165, 414, 802, 1848 |
| NmuCI | GTSAC | 1 cut(s) | 1620 |
| NsiI | ATGCAT | 1 cut(s) | 1143 |
| NspI | RCATGY | 1 cut(s) | 563 |
| NspV | TTCGAA | 1 cut(s) | 115 |
| PceI | AGGCCT | 2 cut(s) | 10, 1828 |
| PciI | ACATGT | 1 cut(s) | 559 |
| PctI | GAATGC | 1 cut(s) | 652 |
| PdmI | GAANNNNTTC | 2 cut(s) | 883, 1275 |
| PfeI | GAWTC | 7 cut(s) | 644, 830, 890, 907, 977, 1276, 1664 |
| PkrI | GCNGC | 6 cut(s) | 91, 523, 1303, 1635, 1756, 1893 |
| PleI | GAGTC | 2 cut(s) | 41, 1555 |
| PpsI | GAGTC | 2 cut(s) | 41, 1555 |
| PscI | ACATGT | 1 cut(s) | 559 |
| Psp6I | CCWGG | 1 cut(s) | 1745 |
| PspEI | GGTNACC | 1 cut(s) | 1223 |
| PspGI | CCWGG | 1 cut(s) | 1745 |
| PspN4I | GGNNCC | 4 cut(s) | 165, 414, 802, 1848 |
| PspPI | GGNCC | 2 cut(s) | 202, 737 |
| PstI | CTGCAG | 1 cut(s) | 1896 |
| PvuII | CAGCTG | 1 cut(s) | 1301 |
| RsaI | GTAC | 3 cut(s) | 1795, 1872, 1885 |
| RsaNI | GTAC | 3 cut(s) | 1794, 1871, 1884 |
| RseI | CAYNNNNRTG | 5 cut(s) | 490, 1128, 1146, 1482, 1573 |
| SaqAI | TTAA | 5 cut(s) | 108, 294, 899, 1043, 1392 |
| SatI | GCNGC | 6 cut(s) | 90, 522, 1302, 1634, 1755, 1892 |
| Sau3AI | GATC | 5 cut(s) | 22, 270, 426, 760, 1134 |
| Sau96I | GGNCC | 2 cut(s) | 202, 737 |
| SchI | GAGTC | 2 cut(s) | 41, 1555 |
| ScrFI | CCNGG | 2 cut(s) | 635, 1747 |
| SduI | GDGCHC | 1 cut(s) | 1315 |
| SfaNI | GCATC | 3 cut(s) | 226, 1377, 1906 |
| SfcI | CTRYAG | 3 cut(s) | 315, 1101, 1892 |
| SfuI | TTCGAA | 1 cut(s) | 115 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 490, 1128, 1146, 1482, 1573 |
| SmlI | CTYRAG | 3 cut(s) | 1314, 1391, 1430 |
| SmoI | CTYRAG | 3 cut(s) | 1314, 1391, 1430 |
| SpeI | ACTAGT | 1 cut(s) | 1307 |
| Sse9I | AATT | 3 cut(s) | 13, 41, 608 |
| SseBI | AGGCCT | 2 cut(s) | 10, 1828 |
| SsiI | CCGC | 1 cut(s) | 1590 |
| SspMI | CTAG | 2 cut(s) | 186, 1308 |
| StuI | AGGCCT | 2 cut(s) | 10, 1828 |
| StyD4I | CCNGG | 2 cut(s) | 633, 1745 |
| StyI | CCWWGG | 3 cut(s) | 338, 477, 804 |
| TaaI | ACNGT | 4 cut(s) | 992, 1163, 1764, 1883 |
| TaqI | TCGA | 1 cut(s) | 115 |
| TaqII | GACCGA | 1 cut(s) | 1794 |
| TasI | AATT | 3 cut(s) | 13, 41, 608 |
| TatI | WGTACW | 1 cut(s) | 1883 |
| TfiI | GAWTC | 7 cut(s) | 644, 830, 890, 907, 977, 1276, 1664 |
| Tru1I | TTAA | 5 cut(s) | 108, 294, 899, 1043, 1392 |
| Tru9I | TTAA | 5 cut(s) | 108, 294, 899, 1043, 1392 |
| TscAI | CASTG | 3 cut(s) | 280, 728, 772 |
| TseFI | GTSAC | 1 cut(s) | 1620 |
| TseI | GCWGC | 6 cut(s) | 89, 521, 1301, 1633, 1754, 1891 |
| Tsp45I | GTSAC | 1 cut(s) | 1620 |
| TspDTI | ATGAA | 8 cut(s) | 48, 474, 542, 636, 759, 1041, 1392, 1409 |
| TspGWI | ACGGA | 2 cut(s) | 808, 1558 |
| TspRI | CASTG | 3 cut(s) | 280, 728, 772 |
| Vha464I | CTTAAG | 1 cut(s) | 1391 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 691 |
| XceI | RCATGY | 1 cut(s) | 563 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 406 |
| XmiI | GTMKAC | 1 cut(s) | 572 |
| XmnI | GAANNNNTTC | 2 cut(s) | 883, 1275 |
| XspI | CTAG | 2 cut(s) | 186, 1308 |
| Zsp2I | ATGCAT | 1 cut(s) | 1143 |