Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007351

Physical Location & Seq

Genomic Coordinates Forward (+)

12479528 .. 12484049

Gene Structure 4522 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G24020.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2880 bp

ATGTGCGAGCCCGATGATAATTCCGCTAGAAACGGCGTCACTACTCAACCTTCGAGGTCAAGGGAGCTTCTAATGGATGTTGACGACTTAGATCTTGACGGTTCATGGCCACTAGATCAAATCCCTTACTTATCCTCATCGAATCGCATGATTTCTCCGATTTTTGTCTCCTCTTCCTCTGAGCAGCCTTGCTCGCCTCTCTGGGCTTTCTCCGACGGTGGAGGAAATGGTTTTCACCACGCAACCTCCGGTGGCGATGATGAGAAGATCAGCTCTGTCTCCGGTGTTCCTTCTTTCCGTCTCGCCGAGTATCCTCTCTTCCTCCCTTACTCTTCTCCATCAGCAGCTGAGAACACAACAGAGAAGCATAACAGTTTCCAGTTTCCGTCTCCATTGATGAGCCTAGTCCCACCAGAGAACACAGACAACTACTGTGTGATCAAAGAGAGGATGACTCAGGCGCTTCGATACTTCAAAGAATCAACCGAACAACACGTTTTGGCTCAGGTCTGGGCTCCTGTGAGAAAGAATGGTCGTGATTTGCTGACGACTTTGGGTCAACCTTTTGTTCTTAATCCTAATGGTAATGGGCTTAATCAATACAGGATGATCTCTCTCACATATATGTTTTCTGTGGATAGTGAAAGTGACGTAGAGCTCGGACTCCCGGGTCGAGTTTTCCGTCAGAAATTGCCTGAATGGACTCCAAATGTTCAGTACTATTCCAGCAAAGAATTCTCGCGGCTTGATCACGCCTTGCACTACAACGTGCGTGGTACACTGGCCTTGCCTGTCTTTAATCCCTCTGGTCAGTCCTGCATAGGTGTTGTGGAACTTATAATGACCTCAGAGAAGATTCACTATGCACCCGAAGTGGACAAAGTTTGCAAAGCCCTTGAGGCGGTAAATCTGAAAAGCTCGGAAATACTTGATCACCAAACAACACAGATATGCAATGAGAGTCGCCAAAACGCGCTTGCTGAGATTCTCGAAGTGCTGACAGTTGTATGTGAGACCCATAACTTGCCTCTCGCTCAGACTTGGGTTCCATGTCAGCATGGGAGCGTTCTTGCCAATGGTGGCGGTCTAAAGAAAAACTGCACCAGCTTTGACGGTAGCTGCATGGGTCAAATCTGCATGTCTACAACCGACATGGCCTGCTATGTCGTGGATGCTCATGTCTGGGGCTTTAGAGATGCCTGTCTTGAACACCATCTCCAGAAAGGCCAGGGAGTCGCTGGACGAGCTTTTCTCAATGGTGGCTCATGTTTCTGCAGAGACATCACCAAGTTCTGCAAAACGCAGTACCCACTAGTCCATTATGCGCTCATGTTCAAGTTGACCACTTGTTTTGCAATATCTCTCCAGAGCTCTTACACGGGCGACGACAGTTACATTCTTGAATTTTTTCTTCCTTCGAGTATAACAGACGACCAAGAGCAAGATTTGCTGTTGGGTTCTATTTTGGTGACAATGAAAGAACATTTTCAGAGTCTGAGGGTTGCATCTGGGGTTGACTTTGGTGAAGATGACGACAAATTGTCTTTCGAGATCATCCAAGCATTACCGGACAAGAAGGTTCATTCAAAAATAGAATCCATTCGAGTTCCCTTTTCTGGTTTTAAGTCAAATGCAACAGAGACGATGTTGATTCCTCAGCCTGTGGTTCAGTCTTCTGATCCAGTAAATGAGAAAATCAACGTGGCCACTGTTAACGGTGTGGTTAAGGAGAAGAAGAAAACAGAGAAAAAGCGTGGGAAGACTGAGAAAACAATCAGTCTAGATGTACTTCAGCAGTATTTCACTGGAAGTCTCAAAGACGCTGCAAAGAGCCTAGGAGTTTGCCCGACGACAATGAAGCGAATTTGCAGGCAACACGGAATCTCGCGGTGGCCATCGAGGAAGATCAAGAAAGTGAATCGTTCAATCACAAAGCTGAAACGAGTCATCGAATCTGTTCAAGGTACTGATGGAGGCCTCGACCTGACTTCCATGGCCGTTAGTTCCATCCCTTGGACACACGGTCAAACATCAGCACAGCCACTAAACTCACCCAATGGTTCCAAACCACCTGAGCTACCAAACACCAATAATTCACCTAACCATTGGTCAAGTGATCACAGTCCGAACGAGCCAAATGGTTCGCCTGAGTTACCACCAAGCAATGGTCACAAGCGATCACGAACGGTGGATGAGAGCGCTGGGACTCCAACCTCTCATGGCTCATGTGACGGTAACCAATTAGATGAACCGAAAGTCCCAAATCAAGATCCGCTCTTCACGGTTGGTGGATCACCCGGGCTCCTTTTTCCACCTTATTCTAGAGATCATGATGTATCTGCAGCTTCCTTCGCAATGCCGAACAGGCTTCTTGGTTCTATAGACCATTTCCGAGGAATGCTCATTGAAGACGCTGGAAGTTCAAAAGATCTGAGAAATCTCTGCCCCACTGCAGCATTTGACGATAAGTTTCAAGACACAAACTGGATGAACAATGATAATAATAGCAACAACAACTTATACGCTCCCCCAAAGGAAGAGGCCATTGCAAATGTTGCATGCGAACCATCAGGCTCAGAAATGAGAACGGTAACAATCAAAGCAAGTTACAAAGACGACATAATACGGTTCAGAATATCCTCGGGTTCAGGTATAATGGAATTGAAGGATGAAGTGGCTAAGAGGCTGAAAGTTGATGCAGGAACGTTCGATATCAAGTATCTTGACGATGATAACGAATGGGTTTTAATAGCTTGTGATGCTGATCTTCAAGAATGTCTCGAGATCCCTAGATCCTCCCGCACGAAAATCGTAAGGCTCTTAGTTCATGATGTAACGACAAATCTAGGGAGCTCCTGCGAGAGCACTGGAGAATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006082 GO:0006355 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009889 GO:0009987 GO:0010035 GO:0010118 GO:0010167 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042126 GO:0042128 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044281 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0071941 GO:0080090 GO:0140110 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001057 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PB1 RWP-RK

Protein Analysis

959

Amino Acids

105.74

Weight (kDa)

5.55

Isoelectric Point (pI)

48.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GAF_NLP	PF22922	36 - 220	3e-75	NLP protein GAF domain
RWP-RK	PF02042	312 - 359	1.9e-23	RWP-RK domain
PB1	PF00564	583 - 664	4.6e-22	PB1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007351)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64530 AT1G64530 AT4G24020 AT4G24020
fragaria_vesca	FvH4_5g11570 FvH4_5g11570
malus_domestica	MD06G1111900.v1.1 MD14G1133200.v1.1 MD14G1133300.v1.1
prunus_persica	Prupe.5G124900_v2.0.a1 Prupe.5G124900_v2.0.a1 Prupe.5G125000_v2.0.a1
pyrus_communis	pycom06g10490
rosa_chinensis	RchiOBHm_Chr7g0186181
rosa_laevigata	RLG00000004858
rosa_multiflora	Rmu_sc0009528.1_g000001
rosa_roxburghii	Rroxscaffold_3G00268340
rosa_rugosa	Rorug06G0472600 Rorug06G0472600 Rorug06G0472600
rosa_samantha	Rh7AG068900 Rh7BG084800 Rh7CG079200 Rh7DG079400
rosa_wichuraiana	Rw7G006610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	839
AasI	GACNNNNNNGTC	1 cut(s)	669
AccB7I	CCANNNNNTGG	2 cut(s)	2013, 2165
AccBSI	CCGCTC	1 cut(s)	2275
AccI	GTMKAC	1 cut(s)	1142
AccII	CGCG	3 cut(s)	742, 974, 1888
AciI	CCGC	7 cut(s)	24, 742, 902, 1083, 1888, 2273, 2800
AclI	AACGTT	1 cut(s)	2705
AclWI	GGATC	5 cut(s)	1673, 2264, 2299, 2779, 2787
AcoI	YGGCCR	4 cut(s)	107, 1704, 1892, 1995
AcsI	RAATTY	3 cut(s)	734, 1403, 1863
AcuI	CTGAAG	1 cut(s)	1775
AcyI	GRCGYC	1 cut(s)	36
AfaI	GTAC	5 cut(s)	719, 778, 1307, 1788, 1966
AfeI	AGCGCT	1 cut(s)	2200
AfiI	CCNNNNNNNGG	4 cut(s)	901, 1616, 2013, 2165
AflIII	ACRYGT	1 cut(s)	493
AhdI	GACNNNNNGTC	3 cut(s)	555, 1540, 2022
AhlI	ACTAGT	1 cut(s)	1312
AjnI	CCWGG	1 cut(s)	1227
AloI	GAACNNNNNNTCC	4 cut(s)	1200, 1232, 2241, 2273
Alw21I	GWGCWC	4 cut(s)	660, 1373, 2855, 2867
Alw26I	GTCTC	9 cut(s)	172, 283, 305, 393, 1007, 1272, 1634, 1817, 2783
AlwI	GGATC	5 cut(s)	1673, 2264, 2299, 2779, 2787
AlwNI	CAGNNNCTG	2 cut(s)	347, 1495
Ama87I	CYCGRG	4 cut(s)	667, 2297, 2641, 2780
Aor51HI	AGCGCT	1 cut(s)	2200
AoxI	GGCC	9 cut(s)	107, 783, 1155, 1225, 1704, 1892, 1975, 1995, 2541
ApeKI	GCWGC	6 cut(s)	184, 344, 1119, 1823, 2342, 2453
ApoI	RAATTY	3 cut(s)	734, 1403, 1863
Asp700I	GAANNNNTTC	4 cut(s)	1407, 1485, 1599, 1956
AspA2I	CCTAGG	1 cut(s)	1834
AspLEI	GCGC	4 cut(s)	463, 976, 1327, 2201
AsuC2I	CCSGG	4 cut(s)	668, 669, 2298, 2299
AsuHPI	GGTGA	8 cut(s)	227, 926, 1276, 1480, 1535, 2043, 2088, 2286
AvaI	CYCGRG	4 cut(s)	667, 2297, 2641, 2780
AvrII	CCTAGG	1 cut(s)	1834
BalI	TGGCCA	3 cut(s)	109, 1706, 1894
BanII	GRGCYC	6 cut(s)	12, 517, 660, 1373, 2304, 2855
BarI	GAAGNNNNNNTAC	2 cut(s)	302, 334
BbsI	GAAGAC	3 cut(s)	1665, 1766, 2415
Bbv12I	GWGCWC	4 cut(s)	660, 1373, 2855, 2867
BbvCI	CCTCAGC	1 cut(s)	1656
BbvI	GCAGC	6 cut(s)	196, 356, 1106, 1810, 2354, 2465
BccI	CCATC	6 cut(s)	346, 1221, 1903, 1964, 2015, 2575
BceAI	ACGGC	2 cut(s)	49, 1982
BcgI	CGANNNNNNTGC	2 cut(s)	2791, 2825
BciT130I	CCWGG	1 cut(s)	1229
BciVI	GTATCC	1 cut(s)	321
BclI	TGATCA	4 cut(s)	438, 748, 931, 2116
BcnI	CCSGG	4 cut(s)	668, 669, 2298, 2299
BcoDI	GTCTC	9 cut(s)	172, 283, 305, 393, 1007, 1272, 1634, 1817, 2783
BcuI	ACTAGT	1 cut(s)	1312
BfaI	CTAG	9 cut(s)	27, 113, 404, 1313, 1781, 1835, 2322, 2790, 2846
BfmI	CTRYAG	4 cut(s)	1273, 2340, 2379, 2451
BfoI	RGCGCY	2 cut(s)	464, 2202
BfuI	GTATCC	1 cut(s)	321
BglI	GCCNNNNNGGC	2 cut(s)	899, 2365
BglII	AGATCT	2 cut(s)	91, 2428
BisI	GCNGC	7 cut(s)	185, 345, 743, 1120, 1824, 2343, 2454
BlnI	CCTAGG	1 cut(s)	1834
BlsI	GCNGC	7 cut(s)	186, 346, 744, 1121, 1825, 2344, 2455
BmcAI	AGTACT	1 cut(s)	719
Bme1390I	CCNGG	5 cut(s)	668, 669, 1229, 2298, 2299
BmeRI	GACNNNNNGTC	3 cut(s)	555, 1540, 2022
BmeT110I	CYCGRG	4 cut(s)	667, 2297, 2641, 2780
BmiI	GGNNCC	4 cut(s)	516, 1047, 2062, 2303
BmrFI	CCNGG	5 cut(s)	668, 669, 1229, 2298, 2299
BmsI	GCATC	5 cut(s)	1162, 1186, 1514, 2686, 2749
BpiI	GAAGAC	3 cut(s)	1665, 1766, 2415
BplI	GAGNNNNNCTC	6 cut(s)	439, 471, 1236, 1268, 2385, 2417
BpmI	CTGGAG	2 cut(s)	1202, 1349
Bpu10I	CCTNAGC	3 cut(s)	504, 1656, 2073
BpuEI	CTTGAG	1 cut(s)	917
BpuMI	CCSGG	4 cut(s)	668, 669, 2298, 2299
BsaBI	GATNNNNATC	1 cut(s)	2763
BsaHI	GRCGYC	1 cut(s)	36
BsaI	GGTCTC	1 cut(s)	1007
BsaJI	CCNNGG	8 cut(s)	667, 1228, 1834, 1992, 2012, 2297, 2392, 2640
BsaWI	WCCGGW	3 cut(s)	248, 281, 1567
BsaXI	ACNNNNNCTCC	6 cut(s)	230, 260, 1200, 1230, 2286, 2316
Bsc4I	CCNNNNNNNGG	4 cut(s)	901, 1616, 2013, 2165
Bse1I	ACTGG	6 cut(s)	379, 786, 1682, 1810, 2489, 2872
Bse3DI	GCAATG	4 cut(s)	961, 2170, 2361, 2544
Bse8I	GATNNNNATC	1 cut(s)	2763
BseBI	CCWGG	1 cut(s)	1229
BseDI	CCNNGG	8 cut(s)	667, 1228, 1834, 1992, 2012, 2297, 2392, 2640
BseGI	GGATG	9 cut(s)	82, 456, 612, 1177, 1554, 2007, 2197, 2493, 2674
BseJI	GATNNNNATC	1 cut(s)	2763
BseLI	CCNNNNNNNGG	4 cut(s)	901, 1616, 2013, 2165
BseMI	GCAATG	4 cut(s)	961, 2170, 2361, 2544
BseNI	ACTGG	6 cut(s)	379, 786, 1682, 1810, 2489, 2872
BseRI	GAGGAG	1 cut(s)	160
BseXI	GCAGC	6 cut(s)	196, 356, 1106, 1810, 2354, 2465
BseYI	CCCAGC	1 cut(s)	2201
BsgI	GTGCAG	1 cut(s)	1084
Bsh1236I	CGCG	3 cut(s)	742, 974, 1888
BshFI	GGCC	9 cut(s)	109, 785, 1157, 1227, 1706, 1894, 1977, 1997, 2543
BsiHKAI	GWGCWC	4 cut(s)	660, 1373, 2855, 2867
BsiHKCI	CYCGRG	4 cut(s)	667, 2297, 2641, 2780
BsiSI	CCGG	5 cut(s)	249, 282, 668, 1568, 2298
BslFI	GGGAC	3 cut(s)	392, 2218, 2243
BslI	CCNNNNNNNGG	4 cut(s)	901, 1616, 2013, 2165
BsmAI	GTCTC	9 cut(s)	172, 283, 305, 393, 1007, 1272, 1634, 1817, 2783
BsmBI	CGTCTC	3 cut(s)	305, 393, 1634
BsmFI	GGGAC	3 cut(s)	392, 2218, 2243
BsmI	GAATGC	1 cut(s)	2403
BsnI	GGCC	9 cut(s)	109, 785, 1157, 1227, 1706, 1894, 1977, 1997, 2543
Bso31I	GGTCTC	1 cut(s)	1007
BsoBI	CYCGRG	4 cut(s)	667, 2297, 2641, 2780
Bsp1286I	GDGCHC	7 cut(s)	12, 517, 660, 1373, 2304, 2855, 2867
Bsp19I	CCATGG	1 cut(s)	1992
BspACI	CCGC	7 cut(s)	24, 742, 902, 1083, 1888, 2273, 2800
BspANI	GGCC	9 cut(s)	109, 785, 1157, 1227, 1706, 1894, 1977, 1997, 2543
BspFNI	CGCG	3 cut(s)	742, 974, 1888
BspHI	TCATGA	2 cut(s)	2329, 2827
BspLI	GGNNCC	4 cut(s)	516, 1047, 2062, 2303
BspMAI	CTGCAG	3 cut(s)	1277, 2344, 2455
BspPI	GGATC	5 cut(s)	1673, 2264, 2299, 2779, 2787
BspQI	GCTCTTC	1 cut(s)	2282
BspTNI	GGTCTC	1 cut(s)	1007
BsrBI	CCGCTC	1 cut(s)	2275
BsrDI	GCAATG	4 cut(s)	961, 2170, 2361, 2544
BsrI	ACTGG	6 cut(s)	379, 786, 1682, 1810, 2489, 2872
BssECI	CCNNGG	8 cut(s)	667, 1228, 1834, 1992, 2012, 2297, 2392, 2640
BssNI	GRCGYC	1 cut(s)	36
BssT1I	CCWWGG	3 cut(s)	1834, 1992, 2012
Bst2UI	CCWGG	1 cut(s)	1229
Bst6I	CTCTTC	5 cut(s)	178, 323, 337, 2282, 2532
BstACI	GRCGYC	1 cut(s)	36
BstAPI	GCANNNNNTGC	2 cut(s)	1447, 2555
BstC8I	GCNNGC	6 cut(s)	8, 194, 978, 1159, 1871, 2560
BstDSI	CCRYGG	1 cut(s)	1992
BstEII	GGTNACC	1 cut(s)	2234
BstF5I	GGATG	9 cut(s)	82, 456, 612, 1177, 1554, 2007, 2197, 2493, 2674
BstFNI	CGCG	3 cut(s)	742, 974, 1888
BstH2I	RGCGCY	2 cut(s)	464, 2202
BstHHI	GCGC	4 cut(s)	463, 976, 1327, 2201
BstMAI	GTCTC	9 cut(s)	172, 283, 305, 393, 1007, 1272, 1634, 1817, 2783
BstMWI	GCNNNNNNNGC	8 cut(s)	193, 899, 1244, 1447, 2351, 2365, 2555, 2759
BstNI	CCWGG	1 cut(s)	1229
BstNSI	RCATGY	2 cut(s)	1141, 2562
BstPI	GGTNACC	1 cut(s)	2234
BstSCI	CCNGG	5 cut(s)	666, 667, 1227, 2296, 2297
BstSFI	CTRYAG	4 cut(s)	1273, 2340, 2379, 2451
BstUI	CGCG	3 cut(s)	742, 974, 1888
BstV1I	GCAGC	6 cut(s)	196, 356, 1106, 1810, 2354, 2465
BstV2I	GAAGAC	3 cut(s)	1665, 1766, 2415
BstX2I	RGATCY	5 cut(s)	91, 2269, 2428, 2784, 2792
BstYI	RGATCY	5 cut(s)	91, 2269, 2428, 2784, 2792
BsuI	GTATCC	1 cut(s)	321
BsuRI	GGCC	9 cut(s)	109, 785, 1157, 1227, 1706, 1894, 1977, 1997, 2543
BtgI	CCRYGG	1 cut(s)	1992
BtgZI	GCGATG	1 cut(s)	270
BtsCI	GGATG	9 cut(s)	82, 456, 612, 1177, 1554, 2007, 2197, 2493, 2674
BtsI	GCAGTG	1 cut(s)	2448
BtsIMutI	CAGTG	5 cut(s)	779, 1707, 1803, 2448, 2865
Cac8I	GCNNGC	6 cut(s)	8, 194, 978, 1159, 1871, 2560
CaiI	CAGNNNCTG	2 cut(s)	347, 1495
CciI	TCATGA	2 cut(s)	2329, 2827
CfoI	GCGC	4 cut(s)	463, 976, 1327, 2201
Cfr9I	CCCGGG	2 cut(s)	667, 2297
CseI	GACGC	3 cut(s)	25, 1829, 2420
Csp6I	GTAC	5 cut(s)	718, 777, 1306, 1787, 1965
CspCI	CAANNNNNGTGG	4 cut(s)	754, 789, 1333, 1368
CviQI	GTAC	5 cut(s)	718, 777, 1306, 1787, 1965
DrdI	GACNNNNNNGTC	1 cut(s)	669
DriI	GACNNNNNGTC	3 cut(s)	555, 1540, 2022
DseDI	GACNNNNNNGTC	1 cut(s)	669
EaeI	YGGCCR	4 cut(s)	107, 1704, 1892, 1995
Eam1104I	CTCTTC	5 cut(s)	178, 323, 337, 2282, 2532
Eam1105I	GACNNNNNGTC	3 cut(s)	555, 1540, 2022
EarI	CTCTTC	5 cut(s)	178, 323, 337, 2282, 2532
Ecl136II	GAGCTC	3 cut(s)	658, 1371, 2853
Eco130I	CCWWGG	3 cut(s)	1834, 1992, 2012
Eco147I	AGGCCT	1 cut(s)	1977
Eco24I	GRGCYC	6 cut(s)	12, 517, 660, 1373, 2304, 2855
Eco31I	GGTCTC	1 cut(s)	1007
Eco32I	GATATC	1 cut(s)	2713
Eco47III	AGCGCT	1 cut(s)	2200
Eco53kI	GAGCTC	3 cut(s)	658, 1371, 2853
Eco57I	CTGAAG	1 cut(s)	1775
Eco88I	CYCGRG	4 cut(s)	667, 2297, 2641, 2780
Eco91I	GGTNACC	1 cut(s)	2234
EcoICRI	GAGCTC	3 cut(s)	658, 1371, 2853
EcoO65I	GGTNACC	1 cut(s)	2234
EcoRI	GAATTC	1 cut(s)	734
EcoRII	CCWGG	1 cut(s)	1227
EcoRV	GATATC	1 cut(s)	2713
EcoT14I	CCWWGG	3 cut(s)	1834, 1992, 2012
EcoT38I	GRGCYC	6 cut(s)	12, 517, 660, 1373, 2304, 2855
ErhI	CCWWGG	3 cut(s)	1834, 1992, 2012
Esp3I	CGTCTC	3 cut(s)	305, 393, 1634
FaqI	GGGAC	3 cut(s)	392, 2218, 2243
FauI	CCCGC	1 cut(s)	2807
FbaI	TGATCA	4 cut(s)	438, 748, 931, 2116
FblI	GTMKAC	1 cut(s)	1142
Fnu4HI	GCNGC	7 cut(s)	185, 345, 743, 1120, 1824, 2343, 2454
FokI	GGATG	9 cut(s)	89, 463, 619, 1184, 1541, 1994, 2204, 2500, 2681
FriOI	GRGCYC	6 cut(s)	12, 517, 660, 1373, 2304, 2855
Fsp4HI	GCNGC	7 cut(s)	185, 345, 743, 1120, 1824, 2343, 2454
FspBI	CTAG	9 cut(s)	27, 113, 404, 1313, 1781, 1835, 2322, 2790, 2846
GlaI	GCGC	4 cut(s)	462, 975, 1326, 2200
GluI	GCNGC	7 cut(s)	185, 345, 743, 1120, 1824, 2343, 2454
GsaI	CCCAGC	1 cut(s)	2205
GsuI	CTGGAG	2 cut(s)	1202, 1349
HaeII	RGCGCY	2 cut(s)	464, 2202
HaeIII	GGCC	9 cut(s)	109, 785, 1157, 1227, 1706, 1894, 1977, 1997, 2543
HapII	CCGG	5 cut(s)	249, 282, 668, 1568, 2298
HgaI	GACGC	3 cut(s)	25, 1829, 2420
HhaI	GCGC	4 cut(s)	463, 976, 1327, 2201
Hin1I	GRCGYC	1 cut(s)	36
Hin6I	GCGC	4 cut(s)	461, 974, 1325, 2199
HinP1I	GCGC	4 cut(s)	461, 974, 1325, 2199
HincII	GTYRAC	5 cut(s)	82, 560, 1341, 1516, 1714
HindII	GTYRAC	5 cut(s)	82, 560, 1341, 1516, 1714
HpaI	GTTAAC	1 cut(s)	1714
HpaII	CCGG	5 cut(s)	249, 282, 668, 1568, 2298
HphI	GGTGA	8 cut(s)	227, 926, 1276, 1480, 1535, 2043, 2088, 2286
Hpy166II	GTNNAC	8 cut(s)	82, 560, 779, 877, 1143, 1341, 1516, 1714
Hpy8I	GTNNAC	8 cut(s)	82, 560, 779, 877, 1143, 1341, 1516, 1714
Hpy99I	CGWCG	3 cut(s)	218, 1388, 1852
HpyAV	CCTTC	6 cut(s)	60, 300, 1425, 1570, 2359, 2659
HpyCH4IV	ACGT	5 cut(s)	495, 651, 768, 1701, 2705
HpyF10VI	GCNNNNNNNGC	8 cut(s)	193, 899, 1244, 1447, 2351, 2365, 2555, 2759
HpySE526I	ACGT	5 cut(s)	495, 651, 768, 1701, 2705
Hsp92I	GRCGYC	1 cut(s)	36
HspAI	GCGC	4 cut(s)	461, 974, 1325, 2199
Ksp22I	TGATCA	4 cut(s)	438, 748, 931, 2116
KspAI	GTTAAC	1 cut(s)	1714
LguI	GCTCTTC	1 cut(s)	2282
LmnI	GCTCC	7 cut(s)	64, 520, 1062, 2307, 2530, 2850, 2858
Lsp1109I	GCAGC	6 cut(s)	196, 356, 1106, 1810, 2354, 2465
LweI	GCATC	5 cut(s)	1162, 1186, 1514, 2686, 2749
MaeI	CTAG	9 cut(s)	27, 113, 404, 1313, 1781, 1835, 2322, 2790, 2846
MaeII	ACGT	5 cut(s)	495, 651, 768, 1701, 2705
MbiI	CCGCTC	1 cut(s)	2275
MflI	RGATCY	5 cut(s)	91, 2269, 2428, 2784, 2792
MhlI	GDGCHC	7 cut(s)	12, 517, 660, 1373, 2304, 2855, 2867
MlsI	TGGCCA	3 cut(s)	109, 1706, 1894
MluNI	TGGCCA	3 cut(s)	109, 1706, 1894
MlyI	GAGTC	8 cut(s)	448, 657, 697, 970, 1242, 1501, 1953, 2200
MmeI	TCCRAC	2 cut(s)	237, 2234
Mox20I	TGGCCA	3 cut(s)	109, 1706, 1894
MroXI	GAANNNNTTC	4 cut(s)	1407, 1485, 1599, 1956
MscI	TGGCCA	3 cut(s)	109, 1706, 1894
MseI	TTAA	7 cut(s)	573, 594, 798, 1623, 1713, 1725, 2747
MslI	CAYNNNNRTG	2 cut(s)	623, 949
Msp20I	TGGCCA	3 cut(s)	109, 1706, 1894
MspA1I	CMGCKG	1 cut(s)	347
MspI	CCGG	5 cut(s)	249, 282, 668, 1568, 2298
MspR9I	CCNGG	5 cut(s)	668, 669, 1229, 2298, 2299
Mva1269I	GAATGC	1 cut(s)	2403
MvaI	CCWGG	1 cut(s)	1229
MvnI	CGCG	3 cut(s)	742, 974, 1888
MwoI	GCNNNNNNNGC	8 cut(s)	193, 899, 1244, 1447, 2351, 2365, 2555, 2759
NciI	CCSGG	4 cut(s)	668, 669, 2298, 2299
NcoI	CCATGG	1 cut(s)	1992
NlaIV	GGNNCC	4 cut(s)	516, 1047, 2062, 2303
NmeAIII	GCCGAG	1 cut(s)	331
NmuCI	GTSAC	5 cut(s)	37, 647, 1468, 2168, 2228
NspI	RCATGY	2 cut(s)	1141, 2562
PaeI	GCATGC	1 cut(s)	2562
PaeR7I	CTCGAG	1 cut(s)	2780
PagI	TCATGA	2 cut(s)	2329, 2827
PceI	AGGCCT	1 cut(s)	1977
PciSI	GCTCTTC	1 cut(s)	2282
PcsI	WCGNNNNNNNCGW	2 cut(s)	679, 2733
PctI	GAATGC	1 cut(s)	2403
PdmI	GAANNNNTTC	4 cut(s)	1407, 1485, 1599, 1956
PfeI	GAWTC	9 cut(s)	142, 479, 856, 985, 1595, 1651, 1881, 1918, 1952
PflMI	CCANNNNNTGG	2 cut(s)	2013, 2165
PkrI	GCNGC	7 cut(s)	186, 346, 744, 1121, 1825, 2344, 2455
PleI	GAGTC	8 cut(s)	448, 657, 697, 969, 1241, 1500, 1952, 2200
PpsI	GAGTC	8 cut(s)	448, 657, 697, 969, 1241, 1500, 1952, 2200
PsiI	TTATAA	1 cut(s)	839
Psp124BI	GAGCTC	3 cut(s)	660, 1373, 2855
Psp1406I	AACGTT	1 cut(s)	2705
Psp6I	CCWGG	1 cut(s)	1227
PspEI	GGTNACC	1 cut(s)	2234
PspFI	CCCAGC	1 cut(s)	2201
PspGI	CCWGG	1 cut(s)	1227
PspN4I	GGNNCC	4 cut(s)	516, 1047, 2062, 2303
PstI	CTGCAG	3 cut(s)	1277, 2344, 2455
PstNI	CAGNNNCTG	2 cut(s)	347, 1495
PsuI	RGATCY	5 cut(s)	91, 2269, 2428, 2784, 2792
PvuII	CAGCTG	1 cut(s)	347
RsaI	GTAC	5 cut(s)	719, 778, 1307, 1788, 1966
RsaNI	GTAC	5 cut(s)	718, 777, 1306, 1787, 1965
RseI	CAYNNNNRTG	2 cut(s)	623, 949
SacI	GAGCTC	3 cut(s)	660, 1373, 2855
SapI	GCTCTTC	1 cut(s)	2282
SaqAI	TTAA	7 cut(s)	573, 594, 798, 1623, 1713, 1725, 2747
SatI	GCNGC	7 cut(s)	185, 345, 743, 1120, 1824, 2343, 2454
ScaI	AGTACT	1 cut(s)	719
SchI	GAGTC	8 cut(s)	448, 657, 697, 970, 1242, 1501, 1953, 2200
ScrFI	CCNGG	5 cut(s)	668, 669, 1229, 2298, 2299
SduI	GDGCHC	7 cut(s)	12, 517, 660, 1373, 2304, 2855, 2867
SfaNI	GCATC	5 cut(s)	1162, 1186, 1514, 2686, 2749
SfcI	CTRYAG	4 cut(s)	1273, 2340, 2379, 2451
Sfr274I	CTCGAG	1 cut(s)	2780
SlaI	CTCGAG	1 cut(s)	2780
SmaI	CCCGGG	2 cut(s)	669, 2299
SmiMI	CAYNNNNRTG	2 cut(s)	623, 949
SmlI	CTYRAG	2 cut(s)	896, 2780
SmoI	CTYRAG	2 cut(s)	896, 2780
SpeI	ACTAGT	1 cut(s)	1312
SphI	GCATGC	1 cut(s)	2562
SseBI	AGGCCT	1 cut(s)	1977
SsiI	CCGC	7 cut(s)	24, 742, 902, 1083, 1888, 2273, 2800
SspMI	CTAG	9 cut(s)	27, 113, 404, 1313, 1781, 1835, 2322, 2790, 2846
SstI	GAGCTC	3 cut(s)	660, 1373, 2855
StuI	AGGCCT	1 cut(s)	1977
StyD4I	CCNGG	5 cut(s)	666, 667, 1227, 2296, 2297
StyI	CCWWGG	3 cut(s)	1834, 1992, 2012
TaiI	ACGT	5 cut(s)	498, 654, 771, 1704, 2708
TatI	WGTACW	2 cut(s)	717, 1786
TauI	GCSGC	1 cut(s)	745
TfiI	GAWTC	9 cut(s)	142, 479, 856, 985, 1595, 1651, 1881, 1918, 1952
Tru1I	TTAA	7 cut(s)	573, 594, 798, 1623, 1713, 1725, 2747
Tru9I	TTAA	7 cut(s)	573, 594, 798, 1623, 1713, 1725, 2747
TscAI	CASTG	5 cut(s)	786, 1714, 1810, 2455, 2872
TseFI	GTSAC	5 cut(s)	37, 647, 1468, 2168, 2228
TseI	GCWGC	6 cut(s)	184, 344, 1119, 1823, 2342, 2453
Tsp45I	GTSAC	5 cut(s)	37, 647, 1468, 2168, 2228
TspDTI	ATGAA	8 cut(s)	93, 1490, 1571, 1871, 2262, 2504, 2685, 2816
TspGWI	ACGGA	4 cut(s)	287, 375, 671, 1893
TspMI	CCCGGG	2 cut(s)	667, 2297
TspRI	CASTG	5 cut(s)	786, 1714, 1810, 2455, 2872
Van91I	CCANNNNNTGG	2 cut(s)	2013, 2165
XapI	RAATTY	3 cut(s)	734, 1403, 1863
XbaI	TCTAGA	2 cut(s)	1780, 2321
XceI	RCATGY	2 cut(s)	1141, 2562
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1235
XhoI	CTCGAG	1 cut(s)	2780
XmaI	CCCGGG	2 cut(s)	667, 2297
XmaJI	CCTAGG	1 cut(s)	1834
XmiI	GTMKAC	1 cut(s)	1142
XmnI	GAANNNNTTC	4 cut(s)	1407, 1485, 1599, 1956
XspI	CTAG	9 cut(s)	27, 113, 404, 1313, 1781, 1835, 2322, 2790, 2846
ZrmI	AGTACT	1 cut(s)	719

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.