Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009528.1

Orthogroup ID

OG0007351

Physical Location & Seq

Genomic Coordinates Forward (+)

2561 .. 6725

Gene Structure 4165 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009528.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2865 bp

atgatgtccgaccccgaagaggaccgagctcccgccattttccccaagtcaaagaacctggacgccatggactttgatatcgacgtttcctggcccttggatcagatccagttcctctctaatcccacctccccgcttctcttctcccccgccgacgacccctgttcccctctctgggcctttcccgatgtcgatcatgacaagctcgccggcggaggaggccgagctcttcccgacccggcccaattcgtttccgatgctagtccggttgtggagaagccaagagagaatgaggacaacagaatgcttccatccccattttcgggactggacccaaatccagatggttattttctaattaaggagagaatcactcaagcactgcggtacctcaaggagtcgagtgatcaacatgtactagctcaggtttgggcaccggtgaaggatggaagtcggtatgtactcacaacctcagggcaaccctttgtgctggatccacatgatggacttcatcagtataggatggtttctctgatgtatatgttttctgtggatggggagaatgatggagtgcttggacttcctggccgtgttttccagcaaaagatgcccgaatggactccaaatgttcagtactactccatcaaagagtatccacggcttgatcatgctcagcactacaatgttcagggaaccttagctttgcccatatttgaaccctctgggcggtcctgtattggtgtaattgagctcataatgacttctcagaagatcaactatgctcctgaggttgataaaatttgcaaagcacttgaggcagtaagcttgaaaagttcagagatattggatcatacaagcacacagatccagatacgcaatgaaggtcgccaaaatgcattaactgaaatcttggagatactgacaatggtatgtgaaactcataaattaccactggctcagacatgggttccatgtatgcatcgcaatgttttggcttatggtggtggcatgaagaagagctgtacaagctttgatggcagctgcatggaacaggtctgcatgtccacaacagatgtggcagtctacattgtagatgctcacatgtggggttttcgagaggcctgtgtagagcatcacttacaaaagggtcaaggggttgctgggagggcatttttgtcccgtaatgcatgcttctgcagagacattagccagttccgcaaaacagaataccctttagtacactacgcacgcatgtttgagttaaccagctcatttgcaatctgtttacagagcactcacactggaaatgatgattacattctagaattttttctgccgcctagcatcagagacagttgtgaacagcagactttattgggctccatattggctatagtgaaagatcattgccagaatcttaaggttgcttctggaattggacttgcagaggaaggaacagttgagattgttcaagcttctataaatgagggacttgactcaagacttgaatgcatacagataccctgttccatggagccacttccagggtcttccttacctaacagagaagagatggtgcgcctaaatccagcaaaaccacagttaatggtggacattgatgctattaatgatgagaggaatgcagttcacaacggtggaaaaaacaacatttctgttcccgagaataaagacataaaaaagacatcagagaggaagcgtgggaaaactgagaaatcaattagtctagaggttcttcaacaatattttgctgggagtcttaaagatgctgcaaagagccttggagtttgtcctaccacaatgaagcgcatctgtaggcagcatggaatctcccgctggccatctcgcaagatcaacaaggtcaaccgttctctcagtaagctaaagcttgtaattgaatctgtccaaggtggtgaaggagcatttggtttgagtcctcttactacaagtccacttactggtgctgttggctccatttctcgaccttatacaagctctcaaccctatgaagttcagggagaaaagaaagattcacccagctctagtacaccaggaagagagggacaggctgggatagaagatccattgcaagatattggtaatggctcaaactcatccaaaacaggtagtggctcaagggaggcgagtactggtacccctacttctcatggttcatgccaaggtagtccggcaaatggaagtgcaatggtaaaggacccctttgtttcttccatccaggagcaattcgttgaagttgatcgctcccctgaatctgcatttcgaccaccagaggaactgtatgtaccagttccgtgttcaataccagatgctctcctcatgacagaacctgaagaaccatctagaggaatgctactagaggatgctggaagttcaaaagacttgagaaatctgtgtccttttaccgatataactgtgcatgagcaagttccagaagttttctggacagaccccccatgtcctgattcggctcctaaccaatccatgtctactcttgcttacacaatgcctcataacacatctttacaagaaatgaggagtgtaaccataaaggcagcatataaagatgatatcattaggtttcggatctctatgagttcttgtatagtagatttgaaagaggaagtggcaaagagattaaagttggaagtgggcacatttgatatgaagtatatggatgatgaccttgagtgggttctgatagcttgtgatgcagacctgcaggaatgcatggaaatttgcagatcatcaggcagcaatatgatcagactctctgttcatgacattctgtccaatcttggaagctcttctgagagcactgaggaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006082 GO:0006355 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009889 GO:0009987 GO:0010035 GO:0010118 GO:0010167 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042126 GO:0042128 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044281 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0071941 GO:0080090 GO:0140110 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001057 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PB1 RWP-RK

Protein Analysis

954

Amino Acids

105.33

Weight (kDa)

5.08

Isoelectric Point (pI)

56.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007351)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64530 AT1G64530 AT4G24020 AT4G24020
fragaria_vesca	FvH4_5g11570 FvH4_5g11570
malus_domestica	MD06G1111900.v1.1 MD14G1133200.v1.1 MD14G1133300.v1.1
prunus_persica	Prupe.5G124900_v2.0.a1 Prupe.5G124900_v2.0.a1 Prupe.5G125000_v2.0.a1
pyrus_communis	pycom06g10490
rosa_chinensis	RchiOBHm_Chr7g0186181
rosa_laevigata	RLG00000004858
rosa_multiflora	Rmu_sc0009528.1_g000001
rosa_roxburghii	Rroxscaffold_3G00268340
rosa_rugosa	Rorug06G0472600 Rorug06G0472600 Rorug06G0472600
rosa_samantha	Rh7AG068900 Rh7BG084800 Rh7CG079200 Rh7DG079400
rosa_wichuraiana	Rw7G006610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2763
Acc65I	GGTACC	2 cut(s)	387, 2171
AccB1I	GGYRCC	3 cut(s)	387, 433, 2171
AccB7I	CCANNNNNTGG	2 cut(s)	503, 1976
AccI	GTMKAC	2 cut(s)	1083, 2525
AciI	CCGC	9 cut(s)	33, 134, 150, 213, 385, 727, 1216, 1337, 1852
AclWI	GGATC	8 cut(s)	100, 108, 488, 501, 855, 859, 2093, 2630
AcoI	YGGCCR	2 cut(s)	586, 1856
AcsI	RAATTY	3 cut(s)	798, 1325, 2772
AcuI	CTGAAG	1 cut(s)	2388
AcyI	GRCGYC	1 cut(s)	63
AflII	CTTAAG	1 cut(s)	1418
AflIII	ACRYGT	2 cut(s)	412, 1101
AgeI	ACCGGT	1 cut(s)	436
AhdI	GACNNNNNGTC	1 cut(s)	2824
AjnI	CCWGG	6 cut(s)	57, 89, 583, 1543, 2068, 2253
AjuI	GAANNNNNNNTTGG	2 cut(s)	1926, 1958
AleI	CACNNNNGTG	1 cut(s)	1653
Alw21I	GWGCWC	5 cut(s)	31, 229, 753, 1295, 2855
Alw26I	GTCTC	2 cut(s)	1194, 1344
AlwI	GGATC	8 cut(s)	100, 108, 488, 501, 855, 859, 2093, 2630
AlwNI	CAGNNNCTG	1 cut(s)	2366
Ama87I	CYCGRG	1 cut(s)	1679
AoxI	GGCC	7 cut(s)	92, 177, 220, 240, 586, 1119, 1856
ApeKI	GCWGC	6 cut(s)	1038, 1041, 1787, 1837, 2591, 2790
ApoI	RAATTY	3 cut(s)	798, 1325, 2772
AseI	ATTAAT	1 cut(s)	1626
AsiGI	ACCGGT	1 cut(s)	436
Asp700I	GAANNNNTTC	2 cut(s)	1329, 2842
Asp718I	GGTACC	2 cut(s)	387, 2171
AspLEI	GCGC	2 cut(s)	1581, 1827
AspS9I	GGNCC	7 cut(s)	22, 93, 177, 241, 331, 729, 2233
AsuC2I	CCSGG	1 cut(s)	239
AsuHPI	GGTGA	3 cut(s)	451, 1943, 2043
AvaI	CYCGRG	1 cut(s)	1679
AvaII	GGWCC	4 cut(s)	22, 331, 729, 2233
AxyI	CCTNAGG	2 cut(s)	472, 786
BaeGI	GKGCMC	2 cut(s)	436, 2693
BaeI	ACNNNNGTAYC	2 cut(s)	371, 404
BalI	TGGCCA	1 cut(s)	1858
BamHI	GGATCC	1 cut(s)	493
BanI	GGYRCC	3 cut(s)	387, 433, 2171
BanII	GRGCYC	4 cut(s)	31, 229, 753, 1382
BarI	GAAGNNNNNNTAC	2 cut(s)	2164, 2196
BbsI	GAAGAC	1 cut(s)	1542
Bbv12I	GWGCWC	5 cut(s)	31, 229, 753, 1295, 2855
BbvI	GCAGC	6 cut(s)	1028, 1050, 1774, 1849, 2603, 2802
BceAI	ACGGC	2 cut(s)	573, 674
BciT130I	CCWGG	6 cut(s)	59, 91, 585, 1545, 2070, 2255
BciVI	GTATCC	1 cut(s)	663
BclI	TGATCA	3 cut(s)	406, 664, 2799
BcnI	CCSGG	1 cut(s)	239
BcoDI	GTCTC	2 cut(s)	1194, 1344
BfaI	CTAG	8 cut(s)	261, 419, 1322, 1341, 1745, 2061, 2379, 2393
BfmI	CTRYAG	4 cut(s)	1195, 1392, 1831, 2756
BfrI	CTTAAG	1 cut(s)	1418
BfuAI	ACCTGC	1 cut(s)	2763
BfuI	GTATCC	1 cut(s)	663
BisI	GCNGC	7 cut(s)	1039, 1042, 1337, 1788, 1838, 2592, 2791
BlpI	GCTNAGC	1 cut(s)	672
BlsI	GCNGC	7 cut(s)	1040, 1043, 1338, 1789, 1839, 2593, 2792
BmcAI	AGTACT	2 cut(s)	635, 2167
Bme1390I	CCNGG	7 cut(s)	59, 91, 239, 585, 1545, 2070, 2255
Bme18I	GGWCC	4 cut(s)	22, 331, 729, 2233
BmeRI	GACNNNNNGTC	1 cut(s)	2824
BmeT110I	CYCGRG	1 cut(s)	1679
BmgT120I	GGNCC	7 cut(s)	22, 93, 177, 241, 331, 729, 2233
BmrFI	CCNGG	7 cut(s)	59, 91, 239, 585, 1545, 2070, 2255
BpiI	GAAGAC	1 cut(s)	1542
BplI	GAGNNNNNCTC	2 cut(s)	358, 390
Bpu10I	CCTNAGC	2 cut(s)	423, 697
Bpu1102I	GCTNAGC	1 cut(s)	672
BpuEI	CTTGAG	7 cut(s)	360, 377, 833, 1483, 2137, 2440, 2744
BpuMI	CCSGG	1 cut(s)	239
BsaBI	GATNNNNATC	1 cut(s)	192
BsaHI	GRCGYC	1 cut(s)	63
BsaJI	CCNNGG	8 cut(s)	66, 96, 656, 1530, 1544, 1798, 1924, 2197
BsaWI	WCCGGW	2 cut(s)	265, 436
Bse118I	RCCGGY	2 cut(s)	209, 436
Bse1I	ACTGG	8 cut(s)	109, 333, 957, 1210, 1306, 1981, 2173, 2324
Bse21I	CCTNAGG	2 cut(s)	472, 786
Bse3DI	GCAATG	5 cut(s)	883, 991, 1405, 2102, 2229
Bse8I	GATNNNNATC	1 cut(s)	192
BseBI	CCWGG	6 cut(s)	59, 91, 585, 1545, 2070, 2255
BseDI	CCNNGG	8 cut(s)	66, 96, 656, 1530, 1544, 1798, 1924, 2197
BseGI	GGATG	8 cut(s)	311, 451, 528, 559, 2132, 2250, 2404, 2719
BseJI	GATNNNNATC	1 cut(s)	192
BseMI	GCAATG	5 cut(s)	883, 991, 1405, 2102, 2229
BseNI	ACTGG	8 cut(s)	109, 333, 957, 1210, 1306, 1981, 2173, 2324
BseRI	GAGGAG	3 cut(s)	231, 2342, 2587
BseSI	GKGCMC	2 cut(s)	436, 2693
BseXI	GCAGC	6 cut(s)	1028, 1050, 1774, 1849, 2603, 2802
BseYI	CCCAGC	4 cut(s)	1160, 1769, 2054, 2087
BshFI	GGCC	7 cut(s)	94, 179, 222, 242, 588, 1121, 1858
BshNI	GGYRCC	3 cut(s)	387, 433, 2171
BshTI	ACCGGT	1 cut(s)	436
BsiHKAI	GWGCWC	5 cut(s)	31, 229, 753, 1295, 2855
BsiHKCI	CYCGRG	1 cut(s)	1679
BsiSI	CCGG	5 cut(s)	210, 239, 266, 437, 2207
BslFI	GGGAC	4 cut(s)	339, 1162, 1503, 2094
BsmAI	GTCTC	2 cut(s)	1194, 1344
BsmFI	GGGAC	4 cut(s)	339, 1162, 1503, 2094
BsmI	GAATGC	5 cut(s)	309, 1514, 1645, 2391, 2768
BsnI	GGCC	7 cut(s)	94, 179, 222, 242, 588, 1121, 1858
BsoBI	CYCGRG	1 cut(s)	1679
Bsp1286I	GDGCHC	8 cut(s)	31, 229, 436, 753, 1295, 1382, 2693, 2855
Bsp1407I	TGTACA	1 cut(s)	1022
Bsp1720I	GCTNAGC	1 cut(s)	672
Bsp19I	CCATGG	2 cut(s)	66, 1530
BspACI	CCGC	9 cut(s)	33, 134, 150, 213, 385, 727, 1216, 1337, 1852
BspANI	GGCC	7 cut(s)	94, 179, 222, 242, 588, 1121, 1858
BspHI	TCATGA	3 cut(s)	196, 2355, 2815
BspMAI	CTGCAG	2 cut(s)	1199, 2760
BspMI	ACCTGC	1 cut(s)	2763
BspPI	GGATC	8 cut(s)	100, 108, 488, 501, 855, 859, 2093, 2630
BspQI	GCTCTTC	3 cut(s)	234, 1010, 2848
BspT107I	GGYRCC	3 cut(s)	387, 433, 2171
BspTI	CTTAAG	1 cut(s)	1418
BsrDI	GCAATG	5 cut(s)	883, 991, 1405, 2102, 2229
BsrFI	RCCGGY	2 cut(s)	209, 436
BsrGI	TGTACA	1 cut(s)	1022
BsrI	ACTGG	8 cut(s)	109, 333, 957, 1210, 1306, 1981, 2173, 2324
BssAI	RCCGGY	2 cut(s)	209, 436
BssECI	CCNNGG	8 cut(s)	66, 96, 656, 1530, 1544, 1798, 1924, 2197
BssNI	GRCGYC	1 cut(s)	63
BssT1I	CCWWGG	6 cut(s)	66, 96, 1530, 1798, 1924, 2197
Bst2UI	CCWGG	6 cut(s)	59, 91, 585, 1545, 2070, 2255
Bst4CI	ACNGT	7 cut(s)	1355, 1459, 1602, 1655, 1886, 2316, 2452
Bst6I	CTCTTC	7 cut(s)	12, 146, 234, 1010, 1563, 2068, 2848
BstACI	GRCGYC	1 cut(s)	63
BstAFI	CTTAAG	1 cut(s)	1418
BstAPI	GCANNNNNTGC	1 cut(s)	607
BstAUI	TGTACA	1 cut(s)	1022
BstC8I	GCNNGC	5 cut(s)	207, 211, 1189, 1249, 1856
BstDSI	CCRYGG	3 cut(s)	66, 656, 1530
BstF5I	GGATG	8 cut(s)	311, 451, 528, 559, 2132, 2250, 2404, 2719
BstHHI	GCGC	2 cut(s)	1581, 1827
BstMAI	GTCTC	2 cut(s)	1194, 1344
BstMWI	GCNNNNNNNGC	8 cut(s)	219, 607, 815, 1026, 1035, 1166, 1215, 2747
BstNI	CCWGG	6 cut(s)	59, 91, 585, 1545, 2070, 2255
BstNSI	RCATGY	5 cut(s)	416, 1063, 1105, 1191, 1255
BstSCI	CCNGG	7 cut(s)	57, 89, 237, 583, 1543, 2068, 2253
BstSFI	CTRYAG	4 cut(s)	1195, 1392, 1831, 2756
BstSLI	GKGCMC	2 cut(s)	436, 2693
BstV1I	GCAGC	6 cut(s)	1028, 1050, 1774, 1849, 2603, 2802
BstV2I	GAAGAC	1 cut(s)	1542
BstX2I	RGATCY	5 cut(s)	105, 493, 864, 2098, 2622
BstYI	RGATCY	5 cut(s)	105, 493, 864, 2098, 2622
Bsu36I	CCTNAGG	2 cut(s)	472, 786
BsuI	GTATCC	1 cut(s)	663
BsuRI	GGCC	7 cut(s)	94, 179, 222, 242, 588, 1121, 1858
BtgI	CCRYGG	3 cut(s)	66, 656, 1530
BtgZI	GCGATG	1 cut(s)	965
BtsCI	GGATG	8 cut(s)	311, 451, 528, 559, 2132, 2250, 2404, 2719
BtsI	GCAGTG	1 cut(s)	380
BtsIMutI	CAGTG	4 cut(s)	380, 950, 1299, 2853
BveI	ACCTGC	1 cut(s)	2763
Cac8I	GCNNGC	5 cut(s)	207, 211, 1189, 1249, 1856
CaiI	CAGNNNCTG	1 cut(s)	2366
CciI	TCATGA	3 cut(s)	196, 2355, 2815
CfoI	GCGC	2 cut(s)	1581, 1827
Cfr10I	RCCGGY	2 cut(s)	209, 436
Cfr13I	GGNCC	7 cut(s)	22, 93, 177, 241, 331, 729, 2233
CseI	GACGC	1 cut(s)	71
CspAI	ACCGGT	1 cut(s)	436
CspCI	CAANNNNNGTGG	2 cut(s)	1056, 1091
DriI	GACNNNNNGTC	1 cut(s)	2824
EaeI	YGGCCR	2 cut(s)	586, 1856
Eam1104I	CTCTTC	7 cut(s)	12, 146, 234, 1010, 1563, 2068, 2848
Eam1105I	GACNNNNNGTC	1 cut(s)	2824
EarI	CTCTTC	7 cut(s)	12, 146, 234, 1010, 1563, 2068, 2848
EciI	GGCGGA	1 cut(s)	228
Ecl136II	GAGCTC	3 cut(s)	29, 227, 751
Eco130I	CCWWGG	6 cut(s)	66, 96, 1530, 1798, 1924, 2197
Eco147I	AGGCCT	1 cut(s)	1121
Eco24I	GRGCYC	4 cut(s)	31, 229, 753, 1382
Eco32I	GATATC	2 cut(s)	79, 2608
Eco47I	GGWCC	4 cut(s)	22, 331, 729, 2233
Eco53kI	GAGCTC	3 cut(s)	29, 227, 751
Eco57I	CTGAAG	1 cut(s)	2388
Eco81I	CCTNAGG	2 cut(s)	472, 786
Eco88I	CYCGRG	1 cut(s)	1679
EcoICRI	GAGCTC	3 cut(s)	29, 227, 751
EcoO109I	RGGNCCY	1 cut(s)	2233
EcoRII	CCWGG	6 cut(s)	57, 89, 583, 1543, 2068, 2253
EcoRV	GATATC	2 cut(s)	79, 2608
EcoT14I	CCWWGG	6 cut(s)	66, 96, 1530, 1798, 1924, 2197
EcoT22I	ATGCAT	5 cut(s)	898, 981, 1189, 1514, 2768
EcoT38I	GRGCYC	4 cut(s)	31, 229, 753, 1382
ErhI	CCWWGG	6 cut(s)	66, 96, 1530, 1798, 1924, 2197
FalI	AAGNNNNNCTT	2 cut(s)	2222, 2254
FaqI	GGGAC	4 cut(s)	339, 1162, 1503, 2094
FauI	CCCGC	4 cut(s)	40, 141, 157, 1859
FbaI	TGATCA	3 cut(s)	406, 664, 2799
FblI	GTMKAC	2 cut(s)	1083, 2525
Fnu4HI	GCNGC	7 cut(s)	1039, 1042, 1337, 1788, 1838, 2592, 2791
FokI	GGATG	8 cut(s)	298, 458, 535, 566, 2119, 2237, 2411, 2726
FriOI	GRGCYC	4 cut(s)	31, 229, 753, 1382
Fsp4HI	GCNGC	7 cut(s)	1039, 1042, 1337, 1788, 1838, 2592, 2791
FspBI	CTAG	8 cut(s)	261, 419, 1322, 1341, 1745, 2061, 2379, 2393
GlaI	GCGC	2 cut(s)	1580, 1826
GluI	GCNGC	7 cut(s)	1039, 1042, 1337, 1788, 1838, 2592, 2791
GsaI	CCCAGC	4 cut(s)	1164, 1773, 2058, 2091
HaeIII	GGCC	7 cut(s)	94, 179, 222, 242, 588, 1121, 1858
HapII	CCGG	5 cut(s)	210, 239, 266, 437, 2207
HgaI	GACGC	1 cut(s)	71
HhaI	GCGC	2 cut(s)	1581, 1827
Hin1I	GRCGYC	1 cut(s)	63
Hin6I	GCGC	2 cut(s)	1579, 1825
HinP1I	GCGC	2 cut(s)	1579, 1825
HincII	GTYRAC	2 cut(s)	1263, 1882
HindII	GTYRAC	2 cut(s)	1263, 1882
HindIII	AAGCTT	4 cut(s)	823, 1027, 1473, 1904
HpaI	GTTAAC	1 cut(s)	1263
HpaII	CCGG	5 cut(s)	210, 239, 266, 437, 2207
HphI	GGTGA	3 cut(s)	451, 1943, 2043
Hpy99I	CGWCG	2 cut(s)	86, 158
HpyAV	CCTTC	4 cut(s)	436, 875, 1445, 1928
HpyCH4III	ACNGT	7 cut(s)	1355, 1459, 1602, 1655, 1886, 2316, 2452
HpyCH4IV	ACGT	1 cut(s)	84
HpyF10VI	GCNNNNNNNGC	8 cut(s)	219, 607, 815, 1026, 1035, 1166, 1215, 2747
HpySE526I	ACGT	1 cut(s)	84
Hsp92I	GRCGYC	1 cut(s)	63
HspAI	GCGC	2 cut(s)	1579, 1825
KpnI	GGTACC	2 cut(s)	391, 2175
KroI	GCCGGC	1 cut(s)	209
KroNI	GCCGGC	1 cut(s)	211
Ksp22I	TGATCA	3 cut(s)	406, 664, 2799
KspAI	GTTAAC	1 cut(s)	1263
LguI	GCTCTTC	3 cut(s)	234, 1010, 2848
LmnI	GCTCC	9 cut(s)	34, 787, 1385, 1534, 1937, 1994, 2257, 2285, 2512
Lsp1109I	GCAGC	6 cut(s)	1028, 1050, 1774, 1849, 2603, 2802
MaeI	CTAG	8 cut(s)	261, 419, 1322, 1341, 1745, 2061, 2379, 2393
MaeII	ACGT	1 cut(s)	84
MaeIII	GTNAC	1 cut(s)	2578
MflI	RGATCY	5 cut(s)	105, 493, 864, 2098, 2622
MhlI	GDGCHC	8 cut(s)	31, 229, 436, 753, 1295, 1382, 2693, 2855
MlsI	TGGCCA	1 cut(s)	1858
MluNI	TGGCCA	1 cut(s)	1858
MlyI	GAGTC	6 cut(s)	407, 613, 1490, 1783, 1960, 2799
MmeI	TCCRAC	2 cut(s)	33, 2661
Mox20I	TGGCCA	1 cut(s)	1858
Mph1103I	ATGCAT	5 cut(s)	898, 981, 1189, 1514, 2768
MreI	CGCCGGCG	1 cut(s)	209
MroNI	GCCGGC	1 cut(s)	209
MroXI	GAANNNNTTC	2 cut(s)	1329, 2842
MscI	TGGCCA	1 cut(s)	1858
MseI	TTAA	8 cut(s)	360, 899, 1262, 1419, 1604, 1626, 1779, 2675
MslI	CAYNNNNRTG	3 cut(s)	681, 984, 1653
Msp20I	TGGCCA	1 cut(s)	1858
MspA1I	CMGCKG	2 cut(s)	1041, 1854
MspCI	CTTAAG	1 cut(s)	1418
MspI	CCGG	5 cut(s)	210, 239, 266, 437, 2207
MspR9I	CCNGG	7 cut(s)	59, 91, 239, 585, 1545, 2070, 2255
Mva1269I	GAATGC	5 cut(s)	309, 1514, 1645, 2391, 2768
MvaI	CCWGG	6 cut(s)	59, 91, 585, 1545, 2070, 2255
MwoI	GCNNNNNNNGC	8 cut(s)	219, 607, 815, 1026, 1035, 1166, 1215, 2747
NaeI	GCCGGC	1 cut(s)	211
NciI	CCSGG	1 cut(s)	239
NcoI	CCATGG	2 cut(s)	66, 1530
NgoMIV	GCCGGC	1 cut(s)	209
NmeAIII	GCCGAG	1 cut(s)	248
NsiI	ATGCAT	5 cut(s)	898, 981, 1189, 1514, 2768
NspI	RCATGY	5 cut(s)	416, 1063, 1105, 1191, 1255
OliI	CACNNNNGTG	1 cut(s)	1653
PaeI	GCATGC	1 cut(s)	1191
PagI	TCATGA	3 cut(s)	196, 2355, 2815
PceI	AGGCCT	1 cut(s)	1121
PciI	ACATGT	2 cut(s)	412, 1101
PciSI	GCTCTTC	3 cut(s)	234, 1010, 2848
PctI	GAATGC	5 cut(s)	309, 1514, 1645, 2391, 2768
PdiI	GCCGGC	1 cut(s)	211
PdmI	GAANNNNTTC	2 cut(s)	1329, 2842
PfeI	GAWTC	7 cut(s)	369, 1414, 1845, 1916, 2048, 2288, 2501
PflMI	CCANNNNNTGG	2 cut(s)	503, 1976
PfoI	TCCNGGA	1 cut(s)	2253
PinAI	ACCGGT	1 cut(s)	436
PkrI	GCNGC	7 cut(s)	1040, 1043, 1338, 1789, 1839, 2593, 2792
PleI	GAGTC	6 cut(s)	406, 613, 1490, 1782, 1959, 2799
PpsI	GAGTC	6 cut(s)	406, 613, 1490, 1782, 1959, 2799
PpuMI	RGGWCCY	1 cut(s)	2233
PscI	ACATGT	2 cut(s)	412, 1101
PshBI	ATTAAT	1 cut(s)	1626
Psp124BI	GAGCTC	3 cut(s)	31, 229, 753
Psp5II	RGGWCCY	1 cut(s)	2233
Psp6I	CCWGG	6 cut(s)	57, 89, 583, 1543, 2068, 2253
PspFI	CCCAGC	4 cut(s)	1160, 1769, 2054, 2087
PspGI	CCWGG	6 cut(s)	57, 89, 583, 1543, 2068, 2253
PspPI	GGNCC	7 cut(s)	22, 93, 177, 241, 331, 729, 2233
PspPPI	RGGWCCY	1 cut(s)	2233
PsrI	GAACNNNNNNTAC	2 cut(s)	2304, 2336
PstI	CTGCAG	2 cut(s)	1199, 2760
PstNI	CAGNNNCTG	1 cut(s)	2366
PsuI	RGATCY	5 cut(s)	105, 493, 864, 2098, 2622
PvuII	CAGCTG	1 cut(s)	1041
RseI	CAYNNNNRTG	3 cut(s)	681, 984, 1653
SacI	GAGCTC	3 cut(s)	31, 229, 753
SapI	GCTCTTC	3 cut(s)	234, 1010, 2848
SaqAI	TTAA	8 cut(s)	360, 899, 1262, 1419, 1604, 1626, 1779, 2675
SatI	GCNGC	7 cut(s)	1039, 1042, 1337, 1788, 1838, 2592, 2791
Sau96I	GGNCC	7 cut(s)	22, 93, 177, 241, 331, 729, 2233
SbfI	CCTGCAGG	1 cut(s)	2760
ScaI	AGTACT	2 cut(s)	635, 2167
SchI	GAGTC	6 cut(s)	407, 613, 1490, 1783, 1960, 2799
ScrFI	CCNGG	7 cut(s)	59, 91, 239, 585, 1545, 2070, 2255
SdaI	CCTGCAGG	1 cut(s)	2760
SduI	GDGCHC	8 cut(s)	31, 229, 436, 753, 1295, 1382, 2693, 2855
SfcI	CTRYAG	4 cut(s)	1195, 1392, 1831, 2756
SgrAI	CRCCGGYG	2 cut(s)	209, 436
SinI	GGWCC	4 cut(s)	22, 331, 729, 2233
SmiMI	CAYNNNNRTG	3 cut(s)	681, 984, 1653
SmlI	CTYRAG	8 cut(s)	375, 392, 812, 1418, 1498, 2152, 2419, 2723
SmoI	CTYRAG	8 cut(s)	375, 392, 812, 1418, 1498, 2152, 2419, 2723
SphI	GCATGC	1 cut(s)	1191
Sse8387I	CCTGCAGG	1 cut(s)	2760
SseBI	AGGCCT	1 cut(s)	1121
SsiI	CCGC	9 cut(s)	33, 134, 150, 213, 385, 727, 1216, 1337, 1852
SspI	AATATT	1 cut(s)	1763
SspMI	CTAG	8 cut(s)	261, 419, 1322, 1341, 1745, 2061, 2379, 2393
SstI	GAGCTC	3 cut(s)	31, 229, 753
StuI	AGGCCT	1 cut(s)	1121
StyD4I	CCNGG	7 cut(s)	57, 89, 237, 583, 1543, 2068, 2253
StyI	CCWWGG	6 cut(s)	66, 96, 1530, 1798, 1924, 2197
TaaI	ACNGT	7 cut(s)	1355, 1459, 1602, 1655, 1886, 2316, 2452
TaiI	ACGT	1 cut(s)	87
TaqI	TCGA	6 cut(s)	81, 192, 401, 1114, 1999, 2299
TaqII	GACCGA	1 cut(s)	39
TatI	WGTACW	7 cut(s)	415, 460, 633, 1022, 1237, 2063, 2165
TauI	GCSGC	1 cut(s)	1339
TfiI	GAWTC	7 cut(s)	369, 1414, 1845, 1916, 2048, 2288, 2501
Tru1I	TTAA	8 cut(s)	360, 899, 1262, 1419, 1604, 1626, 1779, 2675
Tru9I	TTAA	8 cut(s)	360, 899, 1262, 1419, 1604, 1626, 1779, 2675
TscAI	CASTG	4 cut(s)	387, 957, 1306, 2860
TseI	GCWGC	6 cut(s)	1038, 1041, 1787, 1837, 2591, 2790
TspDTI	ATGAA	8 cut(s)	500, 894, 1025, 1835, 2040, 2181, 2717, 2804
TspGWI	ACGGA	1 cut(s)	2319
TspRI	CASTG	4 cut(s)	387, 957, 1306, 2860
Van91I	CCANNNNNTGG	2 cut(s)	503, 1976
Vha464I	CTTAAG	1 cut(s)	1418
VpaK11BI	GGWCC	4 cut(s)	22, 331, 729, 2233
VspI	ATTAAT	1 cut(s)	1626
XapI	RAATTY	3 cut(s)	798, 1325, 2772
XbaI	TCTAGA	3 cut(s)	1321, 1744, 2378
XceI	RCATGY	5 cut(s)	416, 1063, 1105, 1191, 1255
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1072, 2475
XmiI	GTMKAC	2 cut(s)	1083, 2525
XmnI	GAANNNNTTC	2 cut(s)	1329, 2842
XspI	CTAG	8 cut(s)	261, 419, 1322, 1341, 1745, 2061, 2379, 2393
ZrmI	AGTACT	2 cut(s)	635, 2167
Zsp2I	ATGCAT	5 cut(s)	898, 981, 1189, 1514, 2768

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.