Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0007351

Physical Location & Seq

Genomic Coordinates Forward (+)

5706665 .. 5711050

Gene Structure 4386 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG079200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ATGGATTTCTTTCATTTATTCCTCCTCCATTCTCACAGATATATGCTTGGCACTTCTTGTAACCAGATCCAGATACGCAATGAAGGTCGCCAAAATGCATTAACTGAAATCTTGGAGATACTGACAATGGTATGTGAAACTCATAAATTACCACTGGCTCAGACATGGGTTCCATGTATGCATCGCAATGTTTTGGCTTATGGTGGTGGCATGAAGAAGAGCTGTACAAGCTTTGATGGTAGCTGCATGGAACAGGTCTGCATGTCCACAACAGATGTGGCAGTCTACATTGTAGATGCTCACATGTGGGGTTTTCGAGAGGCCTGTGTAGAGCATCACTTACAAAAGGGTCAAGGGGTTGCTGGGAGGGCATTTTTGTCCCGTAATGCATGCTTCTGCAGAGACATTAGCCAGTTCCGCAAAACAGAATACCCTTTAGTACACTACGCACGCATGTTTGAGTTAACCAGCTCATTTGCAATCTGTTTACAGAGCACTCACACTGGAAATGATGATTACATTCTAGAATTTTTTCTGCCGCCTAGCATCAGAGACAGTTGTGAACAGCAGACTTTATTGGGCTCCATATTGGCTATAGTGAAAGATCATTGCCAGAATCTTAAGGTTGCTTCTGGAATTGGACTTGCACAGGAAGGAACTGTTGAGATTGTTCAAGCTTCTATAAATGAGGGACTTGACTCAAGATTTGAATGCATACAGATACCCTGTTCCGTGGAGCCACTTCCAGGGTCTTCCTTACCTAACAGAGAAGAGATGGTGCGCCTAAATCCAGCAAAACCACAGTTAATGGTGGACATTGATGCTATTAATGATGAGAGGAATGCAGTTCACAACGGTGGAAAAAACAACGTTTCTGTTCCCGAGAATAAAGACATAAAAAAGACATCAGAGAGGAAGCGTGGGAAAACTGAGAAATCAATTAGTCTAGAGGTTCTTCAACAATATTTTGCTGGGAGTCTTAAAGATGCTGCAAAGAGCCTTGGAGTTTGTCCTACCACAATGAAGCGCATCTGTAGGCAGCATGGAATCTCCCGCTGGCCATCTCGCAAGATCAACAAGGTCAACCGTTCTCTCAGTAAGCTAAAGCTTGTAATTGAATCTGTCCAAGGTGGTGAAGGAGCATTTGGTTTGAGTCCTCTTACTACAAGTCCACTTACTGGTGCTGTTGGCTCCATTTCTCGACCTTATACAAGCTCTCAACCCTATGAAGTTCAGGGAGAAAAGAAAGATTCACCCAGCTCTAGTACACCAGGAAGAGAGGAACAGGCTGGGATAGAAGATCCATTGCAAGATATTGGTAATGGCTCAAACTCATCCAAAACAGGTAGTGGCTCAAGGGAGGCAAGTACTGGTACCCCTACTTCTCATGGTTCATGCCATGGTAGTCCGGCAAATGGAAGTGCAATGGTAAAGGACCCCTTTGTTTCTTCCATCCATGAGCAATTCGTTGAAGTTGATCGCTCCCCTGAATCAGCATTTCGACCACCAGAGGAACTGTATGTACCAGTTCCATGCTCAATACCAGATGCTCTCCTCATGACAGAACCTGAAGAACCATCTAGAGGAATGCTACTAGAGGATGCTGGAAGTTCAAAAGACTTGAGAAATCTGTGTCCTTTTACCGATATAACTGTGCATGAGCAAGTTCCAGAAGTTTTCTGGACAGACCCCCCACGTCCTGATTCGGCTCCTAACCAATCCATGTCTACTCTTGCTTACACAATGCCTCATAACACATTTTTACAAGAAATGAGGGGTGTAACCATAAAAGCAGCATATAAAGATGATATCATTAGGTTTCGGATCTCTATGAGTTCTTGTATAGTGGATTTGAAAGAGGAAGTGGCAAAGAGATTAAAGTTGGAAGTGGGCACATTTGATATGAAGTATATGGATGATGACCTTGAGTGGGTTCTGATAGCTTGTGATGCAGACCTGCAGGAATGCATGGAAATTTGCAGATCATCAGGCAGCAATATGATCAGACTCTCTGTTCATGACATTCTGTCCAATCTTGGAAGCTCTGCTGAGAGCACTGAGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006082 GO:0006355 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009889 GO:0009987 GO:0010035 GO:0010118 GO:0010167 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042126 GO:0042128 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044281 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0071941 GO:0080090 GO:0140110 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001057 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PB1 RWP-RK

Protein Analysis

688

Amino Acids

75.97

Weight (kDa)

5.54

Isoelectric Point (pI)

59.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GAF_NLP	PF22922	25 - 207	6.3e-78	NLP protein GAF domain
RWP-RK	PF02042	313 - 360	1.4e-23	RWP-RK domain
PB1	PF00564	594 - 674	1.4e-20	PB1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007351)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64530 AT1G64530 AT4G24020 AT4G24020
fragaria_vesca	FvH4_5g11570 FvH4_5g11570
malus_domestica	MD06G1111900.v1.1 MD14G1133200.v1.1 MD14G1133300.v1.1
prunus_persica	Prupe.5G124900_v2.0.a1 Prupe.5G124900_v2.0.a1 Prupe.5G125000_v2.0.a1
pyrus_communis	pycom06g10490
rosa_chinensis	RchiOBHm_Chr7g0186181
rosa_laevigata	RLG00000004858
rosa_multiflora	Rmu_sc0009528.1_g000001
rosa_roxburghii	Rroxscaffold_3G00268340
rosa_rugosa	Rorug06G0472600 Rorug06G0472600 Rorug06G0472600
rosa_samantha	Rh7AG068900 Rh7BG084800 Rh7CG079200 Rh7DG079400
rosa_wichuraiana	Rw7G006610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1965
Acc65I	GGTACC	1 cut(s)	1373
AccB1I	GGYRCC	1 cut(s)	1373
AccB7I	CCANNNNNTGG	1 cut(s)	1178
AccI	GTMKAC	2 cut(s)	285, 1727
AciI	CCGC	3 cut(s)	418, 539, 1054
AclI	AACGTT	1 cut(s)	870
AclWI	GGATC	3 cut(s)	61, 1295, 1832
AcoI	YGGCCR	1 cut(s)	1058
AcsI	RAATTY	2 cut(s)	527, 1974
AcuI	CTGAAG	1 cut(s)	1590
AfaI	GTAC	6 cut(s)	226, 441, 1267, 1369, 1375, 1524
AfiI	CCNNNNNNNGG	5 cut(s)	746, 1178, 1415, 1583, 1930
AflII	CTTAAG	1 cut(s)	620
AflIII	ACRYGT	1 cut(s)	303
AgsI	TTSAA	7 cut(s)	674, 710, 959, 1118, 1472, 1614, 1855
AhdI	GACNNNNNGTC	1 cut(s)	2026
AjiI	CACGTC	1 cut(s)	1697
AjnI	CCWGG	2 cut(s)	745, 1270
AjuI	GAANNNNNNNTTGG	2 cut(s)	1128, 1160
AleI	CACNNNNGTG	1 cut(s)	855
Alw21I	GWGCWC	2 cut(s)	497, 2057
Alw26I	GTCTC	2 cut(s)	396, 546
AlwI	GGATC	3 cut(s)	61, 1295, 1832
AlwNI	CAGNNNCTG	1 cut(s)	1568
Ama87I	CYCGRG	1 cut(s)	881
AoxI	GGCC	2 cut(s)	321, 1058
ApeKI	GCWGC	5 cut(s)	243, 989, 1039, 1793, 1992
ApoI	RAATTY	2 cut(s)	527, 1974
ArsI	GACNNNNNNTTYG	2 cut(s)	689, 721
AseI	ATTAAT	1 cut(s)	828
Asp700I	GAANNNNTTC	1 cut(s)	531
Asp718I	GGTACC	1 cut(s)	1373
AspLEI	GCGC	2 cut(s)	783, 1029
AspS9I	GGNCC	1 cut(s)	1435
AsuHPI	GGTGA	2 cut(s)	1145, 1245
AvaI	CYCGRG	1 cut(s)	881
AvaII	GGWCC	1 cut(s)	1435
BaeGI	GKGCMC	1 cut(s)	1895
BalI	TGGCCA	1 cut(s)	1060
BanI	GGYRCC	1 cut(s)	1373
BanII	GRGCYC	1 cut(s)	584
BarI	GAAGNNNNNNTAC	2 cut(s)	1366, 1398
BbsI	GAAGAC	1 cut(s)	744
Bbv12I	GWGCWC	2 cut(s)	497, 2057
BbvI	GCAGC	5 cut(s)	230, 976, 1051, 1805, 2004
BccI	CCATC	5 cut(s)	230, 769, 1069, 1460, 1585
BciT130I	CCWGG	2 cut(s)	747, 1272
BclI	TGATCA	1 cut(s)	2001
BcoDI	GTCTC	2 cut(s)	396, 546
BfaI	CTAG	6 cut(s)	524, 543, 947, 1263, 1581, 1595
BfmI	CTRYAG	4 cut(s)	397, 594, 1033, 1958
BfrI	CTTAAG	1 cut(s)	620
BfuAI	ACCTGC	1 cut(s)	1965
BisI	GCNGC	6 cut(s)	244, 539, 990, 1040, 1794, 1993
BlsI	GCNGC	6 cut(s)	245, 540, 991, 1041, 1795, 1994
BmcAI	AGTACT	1 cut(s)	1369
Bme1390I	CCNGG	2 cut(s)	747, 1272
Bme18I	GGWCC	1 cut(s)	1435
BmeRI	GACNNNNNGTC	1 cut(s)	2026
BmeT110I	CYCGRG	1 cut(s)	881
BmgBI	CACGTC	1 cut(s)	1697
BmgT120I	GGNCC	1 cut(s)	1435
BmiI	GGNNCC	7 cut(s)	171, 583, 738, 1192, 1375, 1437, 1710
BmrFI	CCNGG	2 cut(s)	747, 1272
BpiI	GAAGAC	1 cut(s)	744
BpuEI	CTTGAG	4 cut(s)	685, 1339, 1642, 1946
BsaJI	CCNNGG	5 cut(s)	732, 746, 1000, 1126, 1399
Bsc4I	CCNNNNNNNGG	5 cut(s)	746, 1178, 1415, 1583, 1930
Bse1I	ACTGG	6 cut(s)	159, 412, 508, 1183, 1375, 1526
Bse3DI	GCAATG	5 cut(s)	85, 193, 607, 1304, 1431
BseBI	CCWGG	2 cut(s)	747, 1272
BseDI	CCNNGG	5 cut(s)	732, 746, 1000, 1126, 1399
BseGI	GGATG	4 cut(s)	1334, 1452, 1606, 1921
BseLI	CCNNNNNNNGG	5 cut(s)	746, 1178, 1415, 1583, 1930
BseMI	GCAATG	5 cut(s)	85, 193, 607, 1304, 1431
BseMII	CTCAG	5 cut(s)	173, 921, 1108, 2040, 2049
BseNI	ACTGG	6 cut(s)	159, 412, 508, 1183, 1375, 1526
BseRI	GAGGAG	2 cut(s)	14, 1544
BseSI	GKGCMC	1 cut(s)	1895
BseXI	GCAGC	5 cut(s)	230, 976, 1051, 1805, 2004
BseYI	CCCAGC	4 cut(s)	362, 971, 1256, 1289
BshFI	GGCC	2 cut(s)	323, 1060
BshNI	GGYRCC	1 cut(s)	1373
BsiHKAI	GWGCWC	2 cut(s)	497, 2057
BsiHKCI	CYCGRG	1 cut(s)	881
BsiSI	CCGG	1 cut(s)	1409
BslFI	GGGAC	2 cut(s)	364, 705
BslI	CCNNNNNNNGG	5 cut(s)	746, 1178, 1415, 1583, 1930
BsmAI	GTCTC	2 cut(s)	396, 546
BsmFI	GGGAC	2 cut(s)	364, 705
BsmI	GAATGC	4 cut(s)	716, 847, 1593, 1970
BsnI	GGCC	2 cut(s)	323, 1060
BsoBI	CYCGRG	1 cut(s)	881
Bsp1286I	GDGCHC	4 cut(s)	497, 584, 1895, 2057
Bsp1407I	TGTACA	1 cut(s)	224
Bsp143I	GATC	8 cut(s)	66, 604, 1071, 1300, 1477, 1824, 1982, 2001
Bsp19I	CCATGG	1 cut(s)	1399
BspACI	CCGC	3 cut(s)	418, 539, 1054
BspANI	GGCC	2 cut(s)	323, 1060
BspCNI	CTCAG	5 cut(s)	172, 922, 1107, 2041, 2050
BspHI	TCATGA	2 cut(s)	1557, 2017
BspLI	GGNNCC	7 cut(s)	171, 583, 738, 1192, 1375, 1437, 1710
BspMAI	CTGCAG	2 cut(s)	401, 1962
BspMI	ACCTGC	1 cut(s)	1965
BspPI	GGATC	3 cut(s)	61, 1295, 1832
BspQI	GCTCTTC	1 cut(s)	212
BspT107I	GGYRCC	1 cut(s)	1373
BspTI	CTTAAG	1 cut(s)	620
BsrDI	GCAATG	5 cut(s)	85, 193, 607, 1304, 1431
BsrGI	TGTACA	1 cut(s)	224
BsrI	ACTGG	6 cut(s)	159, 412, 508, 1183, 1375, 1526
BssECI	CCNNGG	5 cut(s)	732, 746, 1000, 1126, 1399
BssMI	GATC	8 cut(s)	66, 604, 1071, 1300, 1477, 1824, 1982, 2001
BssT1I	CCWWGG	3 cut(s)	1000, 1126, 1399
Bst2UI	CCWGG	2 cut(s)	747, 1272
Bst4CI	ACNGT	7 cut(s)	557, 661, 804, 857, 1088, 1518, 1654
Bst6I	CTCTTC	3 cut(s)	212, 765, 1270
BstAFI	CTTAAG	1 cut(s)	620
BstAUI	TGTACA	1 cut(s)	224
BstC8I	GCNNGC	3 cut(s)	391, 451, 1058
BstDEI	CTNAG	5 cut(s)	159, 930, 1094, 2049, 2058
BstDSI	CCRYGG	2 cut(s)	732, 1399
BstF5I	GGATG	4 cut(s)	1334, 1452, 1606, 1921
BstHHI	GCGC	2 cut(s)	783, 1029
BstKTI	GATC	8 cut(s)	69, 607, 1074, 1303, 1480, 1827, 1985, 2004
BstMAI	GTCTC	2 cut(s)	396, 546
BstMBI	GATC	8 cut(s)	66, 604, 1071, 1300, 1477, 1824, 1982, 2001
BstMWI	GCNNNNNNNGC	4 cut(s)	228, 368, 417, 1949
BstNI	CCWGG	2 cut(s)	747, 1272
BstNSI	RCATGY	4 cut(s)	265, 307, 393, 457
BstSCI	CCNGG	2 cut(s)	745, 1270
BstSFI	CTRYAG	4 cut(s)	397, 594, 1033, 1958
BstSLI	GKGCMC	1 cut(s)	1895
BstV1I	GCAGC	5 cut(s)	230, 976, 1051, 1805, 2004
BstV2I	GAAGAC	1 cut(s)	744
BstX2I	RGATCY	3 cut(s)	66, 1300, 1824
BstYI	RGATCY	3 cut(s)	66, 1300, 1824
BsuRI	GGCC	2 cut(s)	323, 1060
BtgI	CCRYGG	2 cut(s)	732, 1399
BtgZI	GCGATG	1 cut(s)	167
BtrI	CACGTC	1 cut(s)	1697
BtsCI	GGATG	4 cut(s)	1334, 1452, 1606, 1921
BtsIMutI	CAGTG	3 cut(s)	152, 501, 2055
BveI	ACCTGC	1 cut(s)	1965
Cac8I	GCNNGC	3 cut(s)	391, 451, 1058
CaiI	CAGNNNCTG	1 cut(s)	1568
CciI	TCATGA	2 cut(s)	1557, 2017
CfoI	GCGC	2 cut(s)	783, 1029
Cfr13I	GGNCC	1 cut(s)	1435
Csp6I	GTAC	6 cut(s)	225, 440, 1266, 1368, 1374, 1523
CspCI	CAANNNNNGTGG	2 cut(s)	258, 293
CviQI	GTAC	6 cut(s)	225, 440, 1266, 1368, 1374, 1523
DdeI	CTNAG	5 cut(s)	159, 930, 1094, 2049, 2058
DpnI	GATC	8 cut(s)	68, 606, 1073, 1302, 1479, 1826, 1984, 2003
DpnII	GATC	8 cut(s)	66, 604, 1071, 1300, 1477, 1824, 1982, 2001
DriI	GACNNNNNGTC	1 cut(s)	2026
EaeI	YGGCCR	1 cut(s)	1058
Eam1104I	CTCTTC	3 cut(s)	212, 765, 1270
Eam1105I	GACNNNNNGTC	1 cut(s)	2026
EarI	CTCTTC	3 cut(s)	212, 765, 1270
Eco130I	CCWWGG	3 cut(s)	1000, 1126, 1399
Eco147I	AGGCCT	1 cut(s)	323
Eco24I	GRGCYC	1 cut(s)	584
Eco32I	GATATC	1 cut(s)	1810
Eco47I	GGWCC	1 cut(s)	1435
Eco57I	CTGAAG	1 cut(s)	1590
Eco88I	CYCGRG	1 cut(s)	881
EcoO109I	RGGNCCY	1 cut(s)	1435
EcoRII	CCWGG	2 cut(s)	745, 1270
EcoRV	GATATC	1 cut(s)	1810
EcoT14I	CCWWGG	3 cut(s)	1000, 1126, 1399
EcoT22I	ATGCAT	5 cut(s)	100, 183, 391, 716, 1970
EcoT38I	GRGCYC	1 cut(s)	584
ErhI	CCWWGG	3 cut(s)	1000, 1126, 1399
FalI	AAGNNNNNCTT	2 cut(s)	1424, 1456
FaqI	GGGAC	2 cut(s)	364, 705
FauI	CCCGC	1 cut(s)	1061
FbaI	TGATCA	1 cut(s)	2001
FblI	GTMKAC	2 cut(s)	285, 1727
Fnu4HI	GCNGC	6 cut(s)	244, 539, 990, 1040, 1794, 1993
FokI	GGATG	4 cut(s)	1321, 1439, 1613, 1928
FriOI	GRGCYC	1 cut(s)	584
Fsp4HI	GCNGC	6 cut(s)	244, 539, 990, 1040, 1794, 1993
FspBI	CTAG	6 cut(s)	524, 543, 947, 1263, 1581, 1595
GlaI	GCGC	2 cut(s)	782, 1028
GluI	GCNGC	6 cut(s)	244, 539, 990, 1040, 1794, 1993
GsaI	CCCAGC	4 cut(s)	366, 975, 1260, 1293
HaeIII	GGCC	2 cut(s)	323, 1060
HapII	CCGG	1 cut(s)	1409
HhaI	GCGC	2 cut(s)	783, 1029
Hin6I	GCGC	2 cut(s)	781, 1027
HinP1I	GCGC	2 cut(s)	781, 1027
HincII	GTYRAC	2 cut(s)	465, 1084
HindII	GTYRAC	2 cut(s)	465, 1084
HindIII	AAGCTT	3 cut(s)	229, 675, 1106
HpaI	GTTAAC	1 cut(s)	465
HpaII	CCGG	1 cut(s)	1409
HphI	GGTGA	2 cut(s)	1145, 1245
Hpy188I	TCNGA	6 cut(s)	162, 551, 910, 1824, 1938, 2006
HpyAV	CCTTC	3 cut(s)	77, 647, 1130
HpyCH4III	ACNGT	7 cut(s)	557, 661, 804, 857, 1088, 1518, 1654
HpyCH4IV	ACGT	2 cut(s)	870, 1696
HpyF10VI	GCNNNNNNNGC	4 cut(s)	228, 368, 417, 1949
HpyF3I	CTNAG	5 cut(s)	159, 930, 1094, 2049, 2058
HpySE526I	ACGT	2 cut(s)	870, 1696
HspAI	GCGC	2 cut(s)	781, 1027
KpnI	GGTACC	1 cut(s)	1377
Ksp22I	TGATCA	1 cut(s)	2001
KspAI	GTTAAC	1 cut(s)	465
Kzo9I	GATC	8 cut(s)	66, 604, 1071, 1300, 1477, 1824, 1982, 2001
LguI	GCTCTTC	1 cut(s)	212
LmnI	GCTCC	6 cut(s)	587, 736, 1139, 1196, 1487, 1714
Lsp1109I	GCAGC	5 cut(s)	230, 976, 1051, 1805, 2004
MaeI	CTAG	6 cut(s)	524, 543, 947, 1263, 1581, 1595
MaeII	ACGT	2 cut(s)	870, 1696
MaeIII	GTNAC	2 cut(s)	59, 1780
MalI	GATC	8 cut(s)	68, 606, 1073, 1302, 1479, 1826, 1984, 2003
MboI	GATC	8 cut(s)	66, 604, 1071, 1300, 1477, 1824, 1982, 2001
MboII	GAAGA	9 cut(s)	226, 229, 744, 782, 947, 1287, 1310, 1440, 1583
MflI	RGATCY	3 cut(s)	66, 1300, 1824
MhlI	GDGCHC	4 cut(s)	497, 584, 1895, 2057
MlsI	TGGCCA	1 cut(s)	1060
MluCI	AATT	7 cut(s)	146, 527, 636, 939, 1113, 1463, 1974
MluNI	TGGCCA	1 cut(s)	1060
MlyI	GAGTC	4 cut(s)	692, 985, 1162, 2001
MmeI	TCCRAC	1 cut(s)	1863
Mox20I	TGGCCA	1 cut(s)	1060
Mph1103I	ATGCAT	5 cut(s)	100, 183, 391, 716, 1970
MroXI	GAANNNNTTC	1 cut(s)	531
MscI	TGGCCA	1 cut(s)	1060
MseI	TTAA	7 cut(s)	101, 464, 621, 806, 828, 981, 1877
MslI	CAYNNNNRTG	2 cut(s)	186, 855
Msp20I	TGGCCA	1 cut(s)	1060
MspA1I	CMGCKG	1 cut(s)	1056
MspCI	CTTAAG	1 cut(s)	620
MspI	CCGG	1 cut(s)	1409
MspR9I	CCNGG	2 cut(s)	747, 1272
Mva1269I	GAATGC	4 cut(s)	716, 847, 1593, 1970
MvaI	CCWGG	2 cut(s)	747, 1272
MwoI	GCNNNNNNNGC	4 cut(s)	228, 368, 417, 1949
NcoI	CCATGG	1 cut(s)	1399
NdeII	GATC	8 cut(s)	66, 604, 1071, 1300, 1477, 1824, 1982, 2001
NlaIV	GGNNCC	7 cut(s)	171, 583, 738, 1192, 1375, 1437, 1710
NsiI	ATGCAT	5 cut(s)	100, 183, 391, 716, 1970
NspI	RCATGY	4 cut(s)	265, 307, 393, 457
OliI	CACNNNNGTG	1 cut(s)	855
PaeI	GCATGC	1 cut(s)	393
PagI	TCATGA	2 cut(s)	1557, 2017
PceI	AGGCCT	1 cut(s)	323
PciI	ACATGT	1 cut(s)	303
PciSI	GCTCTTC	1 cut(s)	212
PctI	GAATGC	4 cut(s)	716, 847, 1593, 1970
PdmI	GAANNNNTTC	1 cut(s)	531
PfeI	GAWTC	6 cut(s)	616, 1047, 1118, 1250, 1490, 1703
PflMI	CCANNNNNTGG	1 cut(s)	1178
PkrI	GCNGC	6 cut(s)	245, 540, 991, 1041, 1795, 1994
PleI	GAGTC	4 cut(s)	692, 984, 1161, 2001
PpsI	GAGTC	4 cut(s)	692, 984, 1161, 2001
PpuMI	RGGWCCY	1 cut(s)	1435
PscI	ACATGT	1 cut(s)	303
PshBI	ATTAAT	1 cut(s)	828
Psp1406I	AACGTT	1 cut(s)	870
Psp5II	RGGWCCY	1 cut(s)	1435
Psp6I	CCWGG	2 cut(s)	745, 1270
PspFI	CCCAGC	4 cut(s)	362, 971, 1256, 1289
PspGI	CCWGG	2 cut(s)	745, 1270
PspN4I	GGNNCC	7 cut(s)	171, 583, 738, 1192, 1375, 1437, 1710
PspPI	GGNCC	1 cut(s)	1435
PspPPI	RGGWCCY	1 cut(s)	1435
PsrI	GAACNNNNNNTAC	2 cut(s)	1506, 1538
PstI	CTGCAG	2 cut(s)	401, 1962
PstNI	CAGNNNCTG	1 cut(s)	1568
PsuI	RGATCY	3 cut(s)	66, 1300, 1824
RsaI	GTAC	6 cut(s)	226, 441, 1267, 1369, 1375, 1524
RsaNI	GTAC	6 cut(s)	225, 440, 1266, 1368, 1374, 1523
RseI	CAYNNNNRTG	2 cut(s)	186, 855
SapI	GCTCTTC	1 cut(s)	212
SaqAI	TTAA	7 cut(s)	101, 464, 621, 806, 828, 981, 1877
SatI	GCNGC	6 cut(s)	244, 539, 990, 1040, 1794, 1993
Sau3AI	GATC	8 cut(s)	66, 604, 1071, 1300, 1477, 1824, 1982, 2001
Sau96I	GGNCC	1 cut(s)	1435
SbfI	CCTGCAGG	1 cut(s)	1962
ScaI	AGTACT	1 cut(s)	1369
SchI	GAGTC	4 cut(s)	692, 985, 1162, 2001
ScrFI	CCNGG	2 cut(s)	747, 1272
SdaI	CCTGCAGG	1 cut(s)	1962
SduI	GDGCHC	4 cut(s)	497, 584, 1895, 2057
SfcI	CTRYAG	4 cut(s)	397, 594, 1033, 1958
SinI	GGWCC	1 cut(s)	1435
SmiMI	CAYNNNNRTG	2 cut(s)	186, 855
SmlI	CTYRAG	5 cut(s)	620, 700, 1354, 1621, 1925
SmoI	CTYRAG	5 cut(s)	620, 700, 1354, 1621, 1925
SphI	GCATGC	1 cut(s)	393
Sse8387I	CCTGCAGG	1 cut(s)	1962
Sse9I	AATT	7 cut(s)	146, 527, 636, 939, 1113, 1463, 1974
SseBI	AGGCCT	1 cut(s)	323
SsiI	CCGC	3 cut(s)	418, 539, 1054
SspI	AATATT	1 cut(s)	965
SspMI	CTAG	6 cut(s)	524, 543, 947, 1263, 1581, 1595
StuI	AGGCCT	1 cut(s)	323
StyD4I	CCNGG	2 cut(s)	745, 1270
StyI	CCWWGG	3 cut(s)	1000, 1126, 1399
TaaI	ACNGT	7 cut(s)	557, 661, 804, 857, 1088, 1518, 1654
TaiI	ACGT	2 cut(s)	873, 1699
TaqI	TCGA	3 cut(s)	316, 1201, 1501
TasI	AATT	7 cut(s)	146, 527, 636, 939, 1113, 1463, 1974
TatI	WGTACW	4 cut(s)	224, 439, 1265, 1367
TauI	GCSGC	1 cut(s)	541
TfiI	GAWTC	6 cut(s)	616, 1047, 1118, 1250, 1490, 1703
Tru1I	TTAA	7 cut(s)	101, 464, 621, 806, 828, 981, 1877
Tru9I	TTAA	7 cut(s)	101, 464, 621, 806, 828, 981, 1877
TscAI	CASTG	3 cut(s)	159, 508, 2062
TseI	GCWGC	5 cut(s)	243, 989, 1039, 1793, 1992
TspDTI	ATGAA	7 cut(s)	96, 227, 1037, 1242, 1383, 1919, 2006
TspGWI	ACGGA	1 cut(s)	721
TspRI	CASTG	3 cut(s)	159, 508, 2062
Van91I	CCANNNNNTGG	1 cut(s)	1178
Vha464I	CTTAAG	1 cut(s)	620
VpaK11BI	GGWCC	1 cut(s)	1435
VspI	ATTAAT	1 cut(s)	828
XapI	RAATTY	2 cut(s)	527, 1974
XbaI	TCTAGA	3 cut(s)	523, 946, 1580
XceI	RCATGY	4 cut(s)	265, 307, 393, 457
XcmI	CCANNNNNNNNNTGG	2 cut(s)	274, 1677
XmiI	GTMKAC	2 cut(s)	285, 1727
XmnI	GAANNNNTTC	1 cut(s)	531
XspI	CTAG	6 cut(s)	524, 543, 947, 1263, 1581, 1595
ZrmI	AGTACT	1 cut(s)	1369
Zsp2I	ATGCAT	5 cut(s)	100, 183, 391, 716, 1970

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.