Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0007351

Physical Location & Seq

Genomic Coordinates Forward (+)

15796483 .. 15800955

Gene Structure 4473 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g10490.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2967 bp

ATGTCCGATCCTGAAGACGAAACCCAAGCGCCAGCCATTCCGCCGAAGCCAAAGAACGAACGAGAGGCTGCTCTCATGGACTTTGATCTCGACCTCGACGCTTTCTGGCCGTTGGATCCGAATCACTTCCTCTCGAACCCCACATCGCCGCTTTTGTTGCCGTCCAATGACCAGCCCTGTACCCCTCTGTGGGCTTTTCCCGACGGCGATGCCGATGGTGACGATAAGCTCGCCGTGCATGTTGGTCAAGATCTCTCTGACCCTTCTCAATTCGTTTCCTGTAATTCTAATTCCGTAACACAATGGTCAACAGAGAACAAGGATAACAGACTGCTTCCATCGCTATTTTCGGGACTGGAACCTGTTGAAAGTTCAGATGGTTATAGTTTATTTAAAGAGAAGATCACTCAAGCACTTAGGTACCTCAAGGAATTGACTGACCAACATGTTCTAGCTCAGGTTTGGGTACCAGTAAAGGATGGGAATCGGTATGTACTCACAACTTCAGGGCAGCCGTTTGTCCTTGATCAACATAATATTGGACTTCATCAGTATAGGATGGCCTCCCTGATGTATATGTTTTCTGTGGGTGGGGAGAGTGATGGAATGCTTGGGCTTCCTGGCCGCGTTTTCCAGCATAAATTGCCCGAATGGACTCCAAATGTTCAGTACTACTCCATTAAAGAGTATCCACGGCTTGGTCATGCTCAGCATTACAATGTTCAGGGAACCTTAGCTTTGCCCGTGTTTGAGCCCTCTGGACGGTCTTGTGCTGGTGTACTTGAGCTCATAATGACTTCTCCTATTATCAACTGTGGTCCCGAGGTTGATAAAGTTTGCAAAGCACTTGAGGCGGTAAGCTTGAAAAGTTCAGAGATACTGGATCATCCAAGCAGGCAGATTCAAATATGCAATGAAGGTCGCCAAACTGCGTTGGCTGAAATCTTGAAGATACTGACAGTGGTATGTGAAACTTACAAATTACCACTTGCTCAGACGTGGGTTCCCTGTATGCATCGAAGTGTTTTGGCTTATGGCGGGGGCCTGAAGAAGAGCTGTACTAGCTTTGATGGAAGTTGCATGGAACAGGTCTCCATGTCCACAACTGATGTTGCATTCTACATTATAGATGCTCATATGTGGCGTTTTCGAGATGCCTGCGTTGAACATCACTTACAAAAGGGTCAGGGGGTTGCTGGGAGGGCATTTTCATCCCGTAACGCATGCTTCTGCAGAGACATTACCCAGTTCTGCAAAACTGAGTACCCTTTAGTACACTATGCCCGCATGTTTGGTTTAGCCAGCTCTTTTGCTATCTGCTTACAGAGCACTCATACTGGAAATGATGATTATATTCTAGAATTTTTTCTGCCGCCAAGTATCACGGACAGTCATGAACAACAAACTTTGTTGGGCTCCATATTGGCGATAATGAAGAATGATTTCCGGAGTCTCAGTGTTGCTTCTGGAATTGTACTTGAAGAGGAGGGAATAGTTGAAATTGTTCAAGTTTCTGCAAATAACGGGCTTGCCACAAGACTTGAATGTATACTGATACCCCATTCTGTGGAATCACCACCAGGGCCTGCCTTACCTAACAGAGAAGAGATGGTACAACTAGACTCATCGAAACCACAGTTAAAGGTAGTATATGATGTTGTAAATGATGAGAGAAATCCTGTTCATGAAGGTGGAGAAAACAATATTTCTCTCCCAGAGAATAAAGACATAAAAAAGAGACCGGAGAAGAAGCGTGGAAAAGCAGAGAAATCAATTAGTCTAGAGGTTCTCCAACAATATTTTGCAGGGAGTCTTAAAGATGCTGCAAAGAGTCTCGGAGTTTGCCCCACTACAATGAAACGCATCTGCAGACATCATGGAATCTCCCGCTGGCCATCTCGCAAGATCAAGAAGGTCAACCGTTCTCTCACTAAGCTACAGCGCGTAATTGATTCAGTTCAAGGTGCTGAAGGAGCATTTGGTTTAACTCCTCTTACTGCAAGTCCACGTCCGGTTGCTGCTGGCTCCATTTCTCAGCCTTGTAATTTAAATGGTTCTAATAAACAAGGTTCACCAAGCTCTAAACCTTGTGAAGTTTCTGGAGAAAAGAAAGACTCAACCACCTCTACTTCACCAGGAACAGAGGGGCAGGCTGGGATTGACAATCATTTGTTAGATGGGTGGATACTGAGTCACGAGGAACTTGTTCCAGAACATAACAGGTTTCTGCAAGACAGGGGTAAAGGTTCAAACACATCCAACACAGGAAGCAGCTCAAGGGAGGCAAGTGCTGGTACCCCTACTTCTCATGGTTCATGCCAAGGTAGTCCTGGAAATGGAATTGCCATGGTAAACGATCCCTTTGTTCCTTTCATCCATGAACAATGTATTGAAGTAAATGGCTCCCCTCAATCAGCAGTTCGAACAACAGAGGAATCAAATTTATTAGTTGCATGCTCAATCCCCGATGCTCTCCTGATGGCAGAACCTGAGGAACCGTGTAGAGGAATGCTATTAGGGGATGCTGGAAGTTCAAAAGATTTGAGAAATCTGTGTCCTTTGGCAGACACAATAATGGACGAGCAAGTTCGAGAAGCTTGTAACACAAACCCTCCATTTTTGGATTCAGCTCCCAAGCAATCCAACACAATGCCAGATATCATGGGCAGGCAAGAAATGAAGAGTGTAATCATAAAGGCGACATATAAAGAAGACATTATTAGGTTTCGTGTGTCGATGAGTTCAGGTATTGTGGAGCTGAAAGAGGCAGTGGCAAAGAGATTAAAACTGGAAGTGGGCACATTCGACATCAAATATGTGGATGATGACCTTGAACGGGTTCTGGTAGCCTGTGATGCAGATCTGCAGGAGTGTATGGAAGTTTGTAGAACATCAGGCAGCAATATGATCAGACTCTCGGTTCATGACATAATGTCCCATCTCGGGAGCTCTTGCTGGAACGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006082 GO:0006355 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009889 GO:0009987 GO:0010035 GO:0010118 GO:0010167 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042126 GO:0042128 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044281 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0071941 GO:0080090 GO:0140110 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001057 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PB1 RWP-RK

Protein Analysis

989

Amino Acids

108.47

Weight (kDa)

5.45

Isoelectric Point (pI)

52.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007351)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64530 AT1G64530 AT4G24020 AT4G24020
fragaria_vesca	FvH4_5g11570 FvH4_5g11570
malus_domestica	MD06G1111900.v1.1 MD14G1133200.v1.1 MD14G1133300.v1.1
prunus_persica	Prupe.5G124900_v2.0.a1 Prupe.5G124900_v2.0.a1 Prupe.5G125000_v2.0.a1
pyrus_communis	pycom06g10490
rosa_chinensis	RchiOBHm_Chr7g0186181
rosa_laevigata	RLG00000004858
rosa_multiflora	Rmu_sc0009528.1_g000001
rosa_roxburghii	Rroxscaffold_3G00268340
rosa_rugosa	Rorug06G0472600 Rorug06G0472600 Rorug06G0472600
rosa_samantha	Rh7AG068900 Rh7BG084800 Rh7CG079200 Rh7DG079400
rosa_wichuraiana	Rw7G006610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	3 cut(s)	420, 466, 2294
AccB1I	GGYRCC	3 cut(s)	420, 466, 2294
AccB7I	CCANNNNNTGG	2 cut(s)	698, 1567
AccI	GTMKAC	1 cut(s)	1549
AccII	CGCG	3 cut(s)	627, 1944, 2963
AccIII	TCCGGA	1 cut(s)	1446
AciI	CCGC	8 cut(s)	41, 149, 625, 854, 1038, 1285, 1373, 1888
AclWI	GGATC	5 cut(s)	2, 110, 123, 891, 2351
AcoI	YGGCCR	3 cut(s)	107, 622, 1892
AcsI	RAATTY	2 cut(s)	1361, 2440
AcuI	CTGAAG	4 cut(s)	33, 489, 1067, 1989
AfiI	CCNNNNNNNGG	9 cut(s)	189, 190, 698, 762, 1567, 2336, 2504, 2836, 2943
AflIII	ACRYGT	2 cut(s)	445, 2961
AhdI	GACNNNNNGTC	1 cut(s)	2932
AjiI	CACGTC	2 cut(s)	999, 2009
AjnI	CCWGG	4 cut(s)	619, 1579, 2134, 2329
AjuI	GAANNNNNNNTTGG	2 cut(s)	1962, 1994
Alw21I	GWGCWC	3 cut(s)	789, 1331, 2951
Alw26I	GTCTC	5 cut(s)	1096, 1230, 1457, 1732, 1838
AlwI	GGATC	5 cut(s)	2, 110, 123, 891, 2351
AlwNI	CAGNNNCTG	2 cut(s)	1586, 2489
Ama87I	CYCGRG	2 cut(s)	821, 2942
Aor13HI	TCCGGA	1 cut(s)	1446
AoxI	GGCC	6 cut(s)	107, 561, 622, 1042, 1583, 1892
ApeKI	GCWGC	6 cut(s)	68, 511, 1823, 2018, 2271, 2898
ApoI	RAATTY	2 cut(s)	1361, 2440
Asp700I	GAANNNNTTC	6 cut(s)	125, 1365, 1442, 1503, 2205, 2838
Asp718I	GGTACC	3 cut(s)	420, 466, 2294
AspLEI	GCGC	2 cut(s)	31, 1944
AspS9I	GGNCC	3 cut(s)	818, 1042, 1583
AsuHPI	GGTGA	4 cut(s)	230, 1566, 2064, 2124
AsuII	TTCGAA	1 cut(s)	2422
AvaI	CYCGRG	2 cut(s)	821, 2942
AvaII	GGWCC	1 cut(s)	818
AxyI	CCTNAGG	1 cut(s)	2490
BaeGI	GKGCMC	1 cut(s)	2801
BaeI	ACNNNNGTAYC	2 cut(s)	404, 437
BalI	TGGCCA	1 cut(s)	1894
BamHI	GGATCC	1 cut(s)	115
BanI	GGYRCC	3 cut(s)	420, 466, 2294
BanII	GRGCYC	4 cut(s)	756, 789, 1418, 2951
BarI	GAAGNNNNNNTAC	4 cut(s)	1596, 1628, 2287, 2319
BauI	CACGAG	1 cut(s)	2195
BbsI	GAAGAC	2 cut(s)	21, 2718
Bbv12I	GWGCWC	3 cut(s)	789, 1331, 2951
BbvI	GCAGC	6 cut(s)	55, 523, 1810, 2005, 2283, 2910
BceAI	ACGGC	6 cut(s)	94, 145, 218, 220, 499, 710
BcgI	CGANNNNNNTGC	4 cut(s)	191, 225, 1140, 1174
BciT130I	CCWGG	4 cut(s)	621, 1581, 2136, 2331
BciVI	GTATCC	2 cut(s)	699, 2178
BclI	TGATCA	2 cut(s)	526, 2907
BcoDI	GTCTC	5 cut(s)	1096, 1230, 1457, 1732, 1838
BfaI	CTAG	5 cut(s)	452, 1062, 1358, 1619, 1781
BfmI	CTRYAG	4 cut(s)	1231, 1867, 1937, 2864
BfoI	RGCGCY	1 cut(s)	32
BfuI	GTATCC	2 cut(s)	699, 2178
BglII	AGATCT	2 cut(s)	250, 2860
BisI	GCNGC	9 cut(s)	69, 149, 512, 625, 1373, 1824, 2019, 2272, 2899
BlpI	GCTNAGC	1 cut(s)	708
BlsI	GCNGC	9 cut(s)	70, 150, 513, 626, 1374, 1825, 2020, 2273, 2900
BmcAI	AGTACT	1 cut(s)	671
Bme1390I	CCNGG	4 cut(s)	621, 1581, 2136, 2331
Bme18I	GGWCC	1 cut(s)	818
BmeRI	GACNNNNNGTC	1 cut(s)	2932
BmeT110I	CYCGRG	2 cut(s)	821, 2942
BmgBI	CACGTC	2 cut(s)	999, 2009
BmgT120I	GGNCC	3 cut(s)	818, 1042, 1583
BmrFI	CCNGG	4 cut(s)	621, 1581, 2136, 2331
BmrI	ACTGGG	1 cut(s)	1240
BmsI	GCATC	9 cut(s)	199, 1024, 1120, 1144, 1810, 1872, 2458, 2512, 2845
BmuI	ACTGGG	1 cut(s)	1240
BpiI	GAAGAC	2 cut(s)	21, 2718
BpmI	CTGGAG	1 cut(s)	2121
Bpu10I	CCTNAGC	2 cut(s)	456, 733
Bpu1102I	GCTNAGC	1 cut(s)	708
Bpu14I	TTCGAA	1 cut(s)	2422
BpuEI	CTTGAG	5 cut(s)	393, 410, 803, 869, 2260
BsaBI	GATNNNNATC	3 cut(s)	120, 483, 2859
BsaI	GGTCTC	2 cut(s)	1096, 1732
BsaJI	CCNNGG	5 cut(s)	692, 822, 1580, 2320, 2346
BsaWI	WCCGGW	3 cut(s)	1446, 1741, 2011
BsaXI	ACNNNNNCTCC	4 cut(s)	1441, 1471, 2596, 2626
Bsc4I	CCNNNNNNNGG	9 cut(s)	189, 190, 698, 762, 1567, 2336, 2504, 2836, 2943
Bse1I	ACTGG	6 cut(s)	360, 470, 885, 1246, 1342, 2793
Bse21I	CCTNAGG	1 cut(s)	2490
Bse3DI	GCAATG	1 cut(s)	919
Bse8I	GATNNNNATC	3 cut(s)	120, 483, 2859
BseAI	TCCGGA	1 cut(s)	1446
BseBI	CCWGG	4 cut(s)	621, 1581, 2136, 2331
BseDI	CCNNGG	5 cut(s)	692, 822, 1580, 2320, 2346
BseGI	GGATG	8 cut(s)	484, 564, 886, 1211, 2255, 2373, 2527, 2827
BseJI	GATNNNNATC	3 cut(s)	120, 483, 2859
BseLI	CCNNNNNNNGG	9 cut(s)	189, 190, 698, 762, 1567, 2336, 2504, 2836, 2943
BseMI	GCAATG	1 cut(s)	919
BseMII	CTCAG	8 cut(s)	470, 722, 1007, 1251, 1468, 2048, 2180, 2481
BseNI	ACTGG	6 cut(s)	360, 470, 885, 1246, 1342, 2793
BseRI	GAGGAG	2 cut(s)	1499, 1980
BseSI	GKGCMC	1 cut(s)	2801
BseXI	GCAGC	6 cut(s)	55, 523, 1810, 2005, 2283, 2910
BseYI	CCCAGC	2 cut(s)	1196, 2153
Bsh1236I	CGCG	3 cut(s)	627, 1944, 2963
BshFI	GGCC	6 cut(s)	109, 563, 624, 1044, 1585, 1894
BshNI	GGYRCC	3 cut(s)	420, 466, 2294
BsiHKAI	GWGCWC	3 cut(s)	789, 1331, 2951
BsiHKCI	CYCGRG	2 cut(s)	821, 2942
BsiSI	CCGG	3 cut(s)	1447, 1742, 2012
BslFI	GGGAC	3 cut(s)	366, 804, 2920
BslI	CCNNNNNNNGG	9 cut(s)	189, 190, 698, 762, 1567, 2336, 2504, 2836, 2943
BsmAI	GTCTC	5 cut(s)	1096, 1230, 1457, 1732, 1838
BsmFI	GGGAC	3 cut(s)	366, 804, 2920
BsmI	GAATGC	3 cut(s)	612, 1115, 2514
BsnI	GGCC	6 cut(s)	109, 563, 624, 1044, 1585, 1894
Bso31I	GGTCTC	2 cut(s)	1096, 1732
BsoBI	CYCGRG	2 cut(s)	821, 2942
Bsp119I	TTCGAA	1 cut(s)	2422
Bsp1286I	GDGCHC	6 cut(s)	756, 789, 1331, 1418, 2801, 2951
Bsp13I	TCCGGA	1 cut(s)	1446
Bsp1720I	GCTNAGC	1 cut(s)	708
Bsp19I	CCATGG	1 cut(s)	2346
BspACI	CCGC	8 cut(s)	41, 149, 625, 854, 1038, 1285, 1373, 1888
BspANI	GGCC	6 cut(s)	109, 563, 624, 1044, 1585, 1894
BspCNI	CTCAG	8 cut(s)	469, 721, 1006, 1252, 1467, 2047, 2181, 2482
BspEI	TCCGGA	1 cut(s)	1446
BspFNI	CGCG	3 cut(s)	627, 1944, 2963
BspHI	TCATGA	3 cut(s)	1393, 1684, 2923
BspMAI	CTGCAG	3 cut(s)	1235, 1871, 2868
BspPI	GGATC	5 cut(s)	2, 110, 123, 891, 2351
BspQI	GCTCTTC	1 cut(s)	1046
BspT104I	TTCGAA	1 cut(s)	2422
BspT107I	GGYRCC	3 cut(s)	420, 466, 2294
BspTNI	GGTCTC	2 cut(s)	1096, 1732
BsrDI	GCAATG	1 cut(s)	919
BsrI	ACTGG	6 cut(s)	360, 470, 885, 1246, 1342, 2793
BssECI	CCNNGG	5 cut(s)	692, 822, 1580, 2320, 2346
BssNAI	GTATAC	1 cut(s)	1550
BssSI	CACGAG	1 cut(s)	2195
BssT1I	CCWWGG	2 cut(s)	2320, 2346
Bst1107I	GTATAC	1 cut(s)	1550
Bst2BI	CACGAG	1 cut(s)	2195
Bst2UI	CCWGG	4 cut(s)	621, 1581, 2136, 2331
Bst4CI	ACNGT	7 cut(s)	765, 815, 961, 1391, 1638, 1922, 2499
Bst6I	CTCTTC	4 cut(s)	1046, 1476, 1599, 2675
BstAPI	GCANNNNNTGC	1 cut(s)	643
BstBI	TTCGAA	1 cut(s)	2422
BstDSI	CCRYGG	2 cut(s)	692, 2346
BstF5I	GGATG	8 cut(s)	484, 564, 886, 1211, 2255, 2373, 2527, 2827
BstFNI	CGCG	3 cut(s)	627, 1944, 2963
BstH2I	RGCGCY	1 cut(s)	32
BstHHI	GCGC	2 cut(s)	31, 1944
BstMAI	GTCTC	5 cut(s)	1096, 1230, 1457, 1732, 1838
BstNI	CCWGG	4 cut(s)	621, 1581, 2136, 2331
BstNSI	RCATGY	5 cut(s)	242, 449, 1227, 1291, 2457
BstSCI	CCNGG	4 cut(s)	619, 1579, 2134, 2329
BstSFI	CTRYAG	4 cut(s)	1231, 1867, 1937, 2864
BstSLI	GKGCMC	1 cut(s)	2801
BstUI	CGCG	3 cut(s)	627, 1944, 2963
BstV1I	GCAGC	6 cut(s)	55, 523, 1810, 2005, 2283, 2910
BstV2I	GAAGAC	2 cut(s)	21, 2718
BstX2I	RGATCY	3 cut(s)	115, 250, 2860
BstYI	RGATCY	3 cut(s)	115, 250, 2860
BstZ17I	GTATAC	1 cut(s)	1550
Bsu36I	CCTNAGG	1 cut(s)	2490
BsuI	GTATCC	2 cut(s)	699, 2178
BsuRI	GGCC	6 cut(s)	109, 563, 624, 1044, 1585, 1894
BtgI	CCRYGG	2 cut(s)	692, 2346
BtgZI	GCGATG	3 cut(s)	129, 222, 324
BtrI	CACGTC	2 cut(s)	999, 2009
BtsCI	GGATG	8 cut(s)	484, 564, 886, 1211, 2255, 2373, 2527, 2827
BtsI	GCAGTG	1 cut(s)	2775
BtsIMutI	CAGTG	3 cut(s)	966, 1462, 2775
CaiI	CAGNNNCTG	2 cut(s)	1586, 2489
CciI	TCATGA	3 cut(s)	1393, 1684, 2923
CfoI	GCGC	2 cut(s)	31, 1944
Cfr13I	GGNCC	3 cut(s)	818, 1042, 1583
CseI	GACGC	1 cut(s)	107
CspCI	CAANNNNNGTGG	2 cut(s)	1522, 1557
DraI	TTTAAA	2 cut(s)	394, 2049
DriI	GACNNNNNGTC	1 cut(s)	2932
EaeI	YGGCCR	3 cut(s)	107, 622, 1892
Eam1104I	CTCTTC	4 cut(s)	1046, 1476, 1599, 2675
Eam1105I	GACNNNNNGTC	1 cut(s)	2932
EarI	CTCTTC	4 cut(s)	1046, 1476, 1599, 2675
EciI	GGCGGA	1 cut(s)	30
Ecl136II	GAGCTC	2 cut(s)	787, 2949
Eco130I	CCWWGG	2 cut(s)	2320, 2346
Eco24I	GRGCYC	4 cut(s)	756, 789, 1418, 2951
Eco31I	GGTCTC	2 cut(s)	1096, 1732
Eco32I	GATATC	1 cut(s)	2659
Eco47I	GGWCC	1 cut(s)	818
Eco53kI	GAGCTC	2 cut(s)	787, 2949
Eco57I	CTGAAG	4 cut(s)	33, 489, 1067, 1989
Eco81I	CCTNAGG	1 cut(s)	2490
Eco88I	CYCGRG	2 cut(s)	821, 2942
EcoICRI	GAGCTC	2 cut(s)	787, 2949
EcoO109I	RGGNCCY	2 cut(s)	1042, 1583
EcoRII	CCWGG	4 cut(s)	619, 1579, 2134, 2329
EcoRV	GATATC	1 cut(s)	2659
EcoT14I	CCWWGG	2 cut(s)	2320, 2346
EcoT22I	ATGCAT	1 cut(s)	1017
EcoT38I	GRGCYC	4 cut(s)	756, 789, 1418, 2951
ErhI	CCWWGG	2 cut(s)	2320, 2346
FaqI	GGGAC	3 cut(s)	366, 804, 2920
FauI	CCCGC	3 cut(s)	1031, 1292, 1895
FauNDI	CATATG	1 cut(s)	1137
FbaI	TGATCA	2 cut(s)	526, 2907
FblI	GTMKAC	1 cut(s)	1549
Fnu4HI	GCNGC	9 cut(s)	69, 149, 512, 625, 1373, 1824, 2019, 2272, 2899
FokI	GGATG	8 cut(s)	491, 571, 873, 1198, 2242, 2360, 2534, 2834
FriOI	GRGCYC	4 cut(s)	756, 789, 1418, 2951
Fsp4HI	GCNGC	9 cut(s)	69, 149, 512, 625, 1373, 1824, 2019, 2272, 2899
FspBI	CTAG	5 cut(s)	452, 1062, 1358, 1619, 1781
GlaI	GCGC	2 cut(s)	30, 1943
GluI	GCNGC	9 cut(s)	69, 149, 512, 625, 1373, 1824, 2019, 2272, 2899
GsaI	CCCAGC	2 cut(s)	1200, 2157
GsuI	CTGGAG	1 cut(s)	2121
HaeII	RGCGCY	1 cut(s)	32
HaeIII	GGCC	6 cut(s)	109, 563, 624, 1044, 1585, 1894
HapII	CCGG	3 cut(s)	1447, 1742, 2012
HgaI	GACGC	1 cut(s)	107
HhaI	GCGC	2 cut(s)	31, 1944
Hin6I	GCGC	2 cut(s)	29, 1942
HinP1I	GCGC	2 cut(s)	29, 1942
HincII	GTYRAC	2 cut(s)	309, 1918
HindII	GTYRAC	2 cut(s)	309, 1918
HindIII	AAGCTT	2 cut(s)	859, 2595
HpaII	CCGG	3 cut(s)	1447, 1742, 2012
HphI	GGTGA	4 cut(s)	230, 1566, 2064, 2124
Hpy166II	GTNNAC	9 cut(s)	309, 779, 1101, 1276, 1550, 1918, 2006, 2072, 2353
Hpy188I	TCNGA	8 cut(s)	7, 120, 259, 376, 874, 996, 1838, 2912
Hpy8I	GTNNAC	9 cut(s)	309, 779, 1101, 1276, 1550, 1918, 2006, 2072, 2353
Hpy99I	CGWCG	2 cut(s)	101, 206
HpyAV	CCTTC	5 cut(s)	273, 911, 1682, 1906, 1964
HpyCH4III	ACNGT	7 cut(s)	765, 815, 961, 1391, 1638, 1922, 2499
HpyCH4IV	ACGT	2 cut(s)	998, 2008
HpySE526I	ACGT	2 cut(s)	998, 2008
HspAI	GCGC	2 cut(s)	29, 1942
Kpn2I	TCCGGA	1 cut(s)	1446
KpnI	GGTACC	3 cut(s)	424, 470, 2298
Ksp22I	TGATCA	2 cut(s)	526, 2907
LguI	GCTCTTC	1 cut(s)	1046
LmnI	GCTCC	7 cut(s)	1421, 1973, 2030, 2408, 2635, 2755, 2946
Lsp1109I	GCAGC	6 cut(s)	55, 523, 1810, 2005, 2283, 2910
LweI	GCATC	9 cut(s)	199, 1024, 1120, 1144, 1810, 1872, 2458, 2512, 2845
MaeI	CTAG	5 cut(s)	452, 1062, 1358, 1619, 1781
MaeII	ACGT	2 cut(s)	998, 2008
MaeIII	GTNAC	5 cut(s)	218, 295, 1217, 2192, 2600
MflI	RGATCY	3 cut(s)	115, 250, 2860
MhlI	GDGCHC	6 cut(s)	756, 789, 1331, 1418, 2801, 2951
MlsI	TGGCCA	1 cut(s)	1894
MluI	ACGCGT	1 cut(s)	2961
MluNI	TGGCCA	1 cut(s)	1894
MlyI	GAGTC	8 cut(s)	649, 1459, 1616, 1819, 1840, 2108, 2200, 2907
MmeI	TCCRAC	4 cut(s)	93, 1816, 2283, 2667
Mox20I	TGGCCA	1 cut(s)	1894
Mph1103I	ATGCAT	1 cut(s)	1017
MroI	TCCGGA	1 cut(s)	1446
MroXI	GAANNNNTTC	6 cut(s)	125, 1365, 1442, 1503, 2205, 2838
MscI	TGGCCA	1 cut(s)	1894
MseI	TTAA	7 cut(s)	393, 681, 1640, 1815, 1985, 2048, 2783
MslI	CAYNNNNRTG	5 cut(s)	717, 1020, 1689, 1853, 2573
Msp20I	TGGCCA	1 cut(s)	1894
MspA1I	CMGCKG	1 cut(s)	1890
MspI	CCGG	3 cut(s)	1447, 1742, 2012
MspR9I	CCNGG	4 cut(s)	621, 1581, 2136, 2331
Mva1269I	GAATGC	3 cut(s)	612, 1115, 2514
MvaI	CCWGG	4 cut(s)	621, 1581, 2136, 2331
MvnI	CGCG	3 cut(s)	627, 1944, 2963
NcoI	CCATGG	1 cut(s)	2346
NdeI	CATATG	1 cut(s)	1137
NmuCI	GTSAC	2 cut(s)	218, 2192
NsiI	ATGCAT	1 cut(s)	1017
NspI	RCATGY	5 cut(s)	242, 449, 1227, 1291, 2457
NspV	TTCGAA	1 cut(s)	2422
PaeI	GCATGC	2 cut(s)	1227, 2457
PagI	TCATGA	3 cut(s)	1393, 1684, 2923
PciI	ACATGT	1 cut(s)	445
PciSI	GCTCTTC	1 cut(s)	1046
PcsI	WCGNNNNNNNCGW	1 cut(s)	210
PctI	GAATGC	3 cut(s)	612, 1115, 2514
PdmI	GAANNNNTTC	6 cut(s)	125, 1365, 1442, 1503, 2205, 2838
PfeI	GAWTC	8 cut(s)	121, 484, 901, 1571, 1881, 1952, 2435, 2624
PflMI	CCANNNNNTGG	2 cut(s)	698, 1567
PfoI	TCCNGGA	1 cut(s)	2329
PkrI	GCNGC	9 cut(s)	70, 150, 513, 626, 1374, 1825, 2020, 2273, 2900
PleI	GAGTC	8 cut(s)	649, 1458, 1616, 1818, 1839, 2108, 2199, 2907
PpsI	GAGTC	8 cut(s)	649, 1458, 1616, 1818, 1839, 2108, 2199, 2907
PscI	ACATGT	1 cut(s)	445
Psp124BI	GAGCTC	2 cut(s)	789, 2951
Psp6I	CCWGG	4 cut(s)	619, 1579, 2134, 2329
PspFI	CCCAGC	2 cut(s)	1196, 2153
PspGI	CCWGG	4 cut(s)	619, 1579, 2134, 2329
PspPI	GGNCC	3 cut(s)	818, 1042, 1583
PsrI	GAACNNNNNNTAC	2 cut(s)	1158, 1190
PstI	CTGCAG	3 cut(s)	1235, 1871, 2868
PstNI	CAGNNNCTG	2 cut(s)	1586, 2489
PsuI	RGATCY	3 cut(s)	115, 250, 2860
RseI	CAYNNNNRTG	5 cut(s)	717, 1020, 1689, 1853, 2573
SacI	GAGCTC	2 cut(s)	789, 2951
SapI	GCTCTTC	1 cut(s)	1046
SaqAI	TTAA	7 cut(s)	393, 681, 1640, 1815, 1985, 2048, 2783
SatI	GCNGC	9 cut(s)	69, 149, 512, 625, 1373, 1824, 2019, 2272, 2899
Sau96I	GGNCC	3 cut(s)	818, 1042, 1583
ScaI	AGTACT	1 cut(s)	671
SchI	GAGTC	8 cut(s)	649, 1459, 1616, 1819, 1840, 2108, 2200, 2907
ScrFI	CCNGG	4 cut(s)	621, 1581, 2136, 2331
SduI	GDGCHC	6 cut(s)	756, 789, 1331, 1418, 2801, 2951
SfaNI	GCATC	9 cut(s)	199, 1024, 1120, 1144, 1810, 1872, 2458, 2512, 2845
SfcI	CTRYAG	4 cut(s)	1231, 1867, 1937, 2864
SfuI	TTCGAA	1 cut(s)	2422
SinI	GGWCC	1 cut(s)	818
SmiI	ATTTAAAT	1 cut(s)	2049
SmiMI	CAYNNNNRTG	5 cut(s)	717, 1020, 1689, 1853, 2573
SmlI	CTYRAG	5 cut(s)	408, 425, 782, 848, 2275
SmoI	CTYRAG	5 cut(s)	408, 425, 782, 848, 2275
SphI	GCATGC	2 cut(s)	1227, 2457
SsiI	CCGC	8 cut(s)	41, 149, 625, 854, 1038, 1285, 1373, 1888
SspI	AATATT	3 cut(s)	538, 1705, 1799
SspMI	CTAG	5 cut(s)	452, 1062, 1358, 1619, 1781
SstI	GAGCTC	2 cut(s)	789, 2951
StyD4I	CCNGG	4 cut(s)	619, 1579, 2134, 2329
StyI	CCWWGG	2 cut(s)	2320, 2346
SwaI	ATTTAAAT	1 cut(s)	2049
TaaI	ACNGT	7 cut(s)	765, 815, 961, 1391, 1638, 1922, 2499
TaiI	ACGT	2 cut(s)	1001, 2011
TatI	WGTACW	6 cut(s)	493, 669, 778, 1058, 1273, 1474
TauI	GCSGC	3 cut(s)	151, 627, 1375
TfiI	GAWTC	8 cut(s)	121, 484, 901, 1571, 1881, 1952, 2435, 2624
Tru1I	TTAA	7 cut(s)	393, 681, 1640, 1815, 1985, 2048, 2783
Tru9I	TTAA	7 cut(s)	393, 681, 1640, 1815, 1985, 2048, 2783
TscAI	CASTG	3 cut(s)	966, 1462, 2775
TseFI	GTSAC	2 cut(s)	218, 2192
TseI	GCWGC	6 cut(s)	68, 511, 1823, 2018, 2271, 2898
Tsp45I	GTSAC	2 cut(s)	218, 2192
TspGWI	ACGGA	2 cut(s)	283, 1400
TspRI	CASTG	3 cut(s)	966, 1462, 2775
Van91I	CCANNNNNTGG	2 cut(s)	698, 1567
VpaK11BI	GGWCC	1 cut(s)	818
XapI	RAATTY	2 cut(s)	1361, 2440
XbaI	TCTAGA	2 cut(s)	1357, 1780
XceI	RCATGY	5 cut(s)	242, 449, 1227, 1291, 2457
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2327
XmiI	GTMKAC	1 cut(s)	1549
XmnI	GAANNNNTTC	6 cut(s)	125, 1365, 1442, 1503, 2205, 2838
XspI	CTAG	5 cut(s)	452, 1062, 1358, 1619, 1781
ZrmI	AGTACT	1 cut(s)	671
Zsp2I	ATGCAT	1 cut(s)	1017

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.