Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0007351

Physical Location & Seq

Genomic Coordinates Reverse (-)

6572992 .. 6577929

Gene Structure 4938 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g11570.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3018 bp

ATGCAACTTGTAAAAAAACAACTCATTTGGATTCCATGGAATCAAACCACCACCCCCCACTCTGCAATTTACCATTACCACTTCTCCTCCAACTCAACCCCCCTCTTTCTCTTTCTTCTCTCCTTCCCAACTTCTCGGCTGCTTTTCCGGACACACACAACCATGTCCGACCCCGAAGACGACCGCGCTCCCTCCATTTTCCCAAAGTCAAAGAGCCTCGACGCCTCTTCCCTCATGGACTTCGATATCGACGTCCCCTGGCCGTTGGATCAGATCCACTTCCTGTCCAACCCCACCTCCCCTCTTTTCTTCTCCCCCGCCGACGACCCCTGCTCTCCTCTGTGGGCCTTTTCCGATGTCAACAATAATGATAAGCTCGCCCGAGCTCTTCCCGACCCGGCCCAATCCGTTTCCGATACTAATCCGGTAGCGCAGAAGCGGAAAGAGAATGAGGACAACAGAATTGTTCCGTCCCCATTTTCGGGGCTGGAGCCGAATGCGGACGGTTATTTTCTGATTAAAGAGAGGATCACTCGAGCACTTCGATACCTTAAGGAGTCGAGTGATCAGCATGTTCTAGCTCAGGTTTGGGCACCGGTGTGGGATGGGAATCGGTATGTACTCACAACTTCAGGGCAGCCCTTTGTGTTGGATCCGCATGATGGACTTCATCAGTATAGGATGGTTTCGCTGATGTATATGTTTTCTGTGGACGGGGAGAATGATGGAGTGCTTGGGCTTCCTGGCCGTGTCTTCCAGCAAAAGCTGCCCGAGTGGACTCCGAATGTTCAGTACTATTCCATCAAAGAGTATCCACGGCTTGATCATGCTCAGCACTACAATGTTCAGGGAACCTTGGCTTTGCCTGTATTTGAACCCTCTGGACGGTCCTGTATTGGTGTAATTGAGCTCATTATGACTTCTCAGAAGATCAATTATGCTCCCGAGGTTGATAAAATTTGCAAAGCACTTGAGGCAGTAAGCTTGAAGAGTTCAGAGATGTTGGATCATACTAGCACACAGATTCAGATACGCAATGAAGGTCGCCAAACTGCATTAACTGAGATCTTGGAGATACTGACAATGGTATGTGAAACTCATAAGTTACCACTGGCTCAGACGTGGGTTCCATGTATGCATCGCAATGTTTTGGCTTATGGTGGCGGCATGAAGAAGAGTTGTACGAGCTTTGACGGTAGCTGCATGGAACAGGTCTGCATGTCCACAACAGATGTGGCGGTCTACATTGTAGATGCTCACATGTGGGGTTTTCGAGAGGCCTGTGTAGAGCATCACTTACAAAAGGGTCAAGGGGTTGCTGGTAGGGCATTTTTGTCCCGTAATGCGTGCTTCTGCAGAGACATTAGCCAGTTCCGCAAAACAGAATACCCTTTAGTACACTATGCGCGCATGTTTAGGTTAACCAGCTCATTTGCAATCTGTTTACAGAGCACTCATACAGGAAATGATGATTACATTCTAGAATTTTTTCTGCCGCCTAGCATCACAGACAGTAGTGAACAACAGACGTTATTGGGCTCCATATTGGCTATAGTGAAAGGTCATTGTCAGAATCTCAAGGTTGCTTCTGGAATTGGACTTGCAGAGGAAGGAATAGTTGAGATTGTTCAAGCTTCTATAAATGAGGGGCTTGATTCAAGATTTGAATGCATACAGATACCCCGATCGGTGGAGCCACTACCAGGGTCTTCCTTACCTAACAGAGAAGAGATAGTGCACCTAGATCCAGCAAAACCACAGTTAATGGTGGACATCAATGCTATCAATGATGAGAGAAATGCAGTTCACAAGGGTGGACAAAATAACATTTCTGTTCCCGAGAATAAAGACATGAAAAAGACATCAGAGAGGAAGCGTGGGAAAACTGAGAAATCAATTAGTCTAGAGGTTCTTCAACAATATTTTGCTGGAAGTCTTAAAGATGCTGCAAAGAGCCTTGGAGTTTGTCCTACCACAATGAAGCGCATCTGTAGGCAGCATGGAATCTCCCGCTGGCCGTCTCGCAAGATCAACAAGGTCAACCGTTCTCTCAGTAAGCTAAAGCTTGTAATTGAATCTGTCCAAGGTGGTGAAGGAGCATTTGGTTTGAGTCCTCTTACTACAAGTCCGCTTACTGGTGCTGTTGGCTCCAATTCTCGACCTTTTACAAGCTCACAACCTTATGAAGTTCAGGGAGAAAAGAAAGACTCGCCCAACTCTAGTTCACCAGGAAGAGAGGGACAGGCTGGGATAGGAGATCCAGATATTGGTAGAGGCTCAAACTCATCCAAAACAGGTAGTGGCTCAAGGGAGGCGAGTACTGGTACCCCTACTTCTCATGGTTCATGCCAAGGTAGTCCGGCAAATGGAAGTGCAATGGCAAAGGAGCCCTTTGTTTCTACCATGCATGAGCAATTCGCTGAAGTAGATCGCTCCCCTGAATCAGCATTTCGACCACCAGACGAAGTCTATGTACCAGTTCTTTGTTCGATACCTGATGCTCTCCTCATTACAGAACCTGAAGAACCATCTAGAGGGATGCAACTAGAGGATGCTGGAAGTTCAAAAGACTTGAGAAATCTGTGTCCTCTTGCAGACTTAACTGTGGACGAGCAAGTTCCAGAAGTTTTCTGGACAGACCCCCCATATCCCGATTCAGCTCCGAAGCAATTCATCCCTACTCTTGCATACACAGTGCCCCATAACACATCTTTACGAGAAATGAGGAGTGTAACCATAAAGGCAGCATATAAAGATGATATCATTAGGTTTCGGATCTCTATGAGTTCTTGTATAGTGGATCTGAGAGAGGAAGTGGCAAAGAGATTAAAGTTGGAGGTGGGCACATTTGATATGAAGTACATGGATGATGACCTCGAGTGGGTTTTGATAGCCTGTGATGCAGACCTGCAGGAATGCATGGAAATTTGCCGTTCATCAGGCAGCAATATGATCAGACTCTCTGTTCACGACATTCTGCCCAATCTTGGAAGCTCTTGCGAGAGCACTGACGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006082 GO:0006355 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009889 GO:0009987 GO:0010035 GO:0010118 GO:0010167 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042126 GO:0042128 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044281 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0071941 GO:0080090 GO:0140110 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001057 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PB1 RWP-RK

Protein Analysis

1006

Amino Acids

111.59

Weight (kDa)

5.57

Isoelectric Point (pI)

52.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GAF_NLP	PF22922	344 - 526	1.7e-77	NLP protein GAF domain
RWP-RK	PF02042	632 - 679	2.2e-23	RWP-RK domain
PB1	PF00564	911 - 991	4.4e-21	PB1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007351)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64530 AT1G64530 AT4G24020 AT4G24020
fragaria_vesca	FvH4_5g11570 FvH4_5g11570
malus_domestica	MD06G1111900.v1.1 MD14G1133200.v1.1 MD14G1133300.v1.1
prunus_persica	Prupe.5G124900_v2.0.a1 Prupe.5G124900_v2.0.a1 Prupe.5G125000_v2.0.a1
pyrus_communis	pycom06g10490
rosa_chinensis	RchiOBHm_Chr7g0186181
rosa_laevigata	RLG00000004858
rosa_multiflora	Rmu_sc0009528.1_g000001
rosa_roxburghii	Rroxscaffold_3G00268340
rosa_rugosa	Rorug06G0472600 Rorug06G0472600 Rorug06G0472600
rosa_samantha	Rh7AG068900 Rh7BG084800 Rh7CG079200 Rh7DG079400
rosa_wichuraiana	Rw7G006610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	255
Acc36I	ACCTGC	1 cut(s)	2916
Acc65I	GGTACC	1 cut(s)	2324
AccB1I	GGYRCC	2 cut(s)	592, 2324
AccB7I	CCANNNNNTGG	1 cut(s)	2267
AccI	GTMKAC	1 cut(s)	1242
AccII	CGCG	2 cut(s)	186, 1408
AccIII	TCCGGA	1 cut(s)	147
AcoI	YGGCCR	3 cut(s)	260, 745, 2015
AcsI	RAATTY	3 cut(s)	957, 1484, 2925
AcuI	CTGAAG	3 cut(s)	615, 2442, 2541
AcyI	GRCGYC	2 cut(s)	222, 252
AfaI	GTAC	8 cut(s)	621, 794, 1183, 1398, 2320, 2326, 2475, 2861
AflII	CTTAAG	1 cut(s)	551
AflIII	ACRYGT	1 cut(s)	1260
AgeI	ACCGGT	1 cut(s)	595
AgsI	TTSAA	8 cut(s)	875, 988, 1631, 1659, 1667, 1916, 2075, 2565
AjiI	CACGTC	1 cut(s)	1122
AjnI	CCWGG	4 cut(s)	257, 742, 1702, 2227
AjuI	GAANNNNNNNTTGG	2 cut(s)	2085, 2117
AleI	CACNNNNGTG	2 cut(s)	598, 1812
Alw21I	GWGCWC	6 cut(s)	388, 541, 912, 1454, 1740, 3008
Alw26I	GTCTC	2 cut(s)	1353, 2025
Alw44I	GTGCAC	1 cut(s)	1736
AlwNI	CAGNNNCTG	1 cut(s)	2519
Ama87I	CYCGRG	6 cut(s)	381, 534, 770, 944, 1838, 2876
Aor13HI	TCCGGA	1 cut(s)	147
AoxI	GGCC	6 cut(s)	260, 345, 399, 745, 1278, 2015
ApaLI	GTGCAC	1 cut(s)	1736
ApeKI	GCWGC	8 cut(s)	139, 637, 766, 1200, 1946, 1996, 2744, 2943
ApoI	RAATTY	3 cut(s)	957, 1484, 2925
AsiGI	ACCGGT	1 cut(s)	595
Asp700I	GAANNNNTTC	2 cut(s)	1488, 2669
Asp718I	GGTACC	1 cut(s)	2324
AspLEI	GCGC	5 cut(s)	188, 433, 1408, 1410, 1986
AspS9I	GGNCC	3 cut(s)	345, 400, 888
AsuC2I	CCSGG	1 cut(s)	398
AsuHPI	GGTGA	2 cut(s)	2102, 2217
AvaI	CYCGRG	6 cut(s)	381, 534, 770, 944, 1838, 2876
AvaII	GGWCC	1 cut(s)	888
BaeGI	GKGCMC	4 cut(s)	595, 1740, 2700, 2846
BamHI	GGATCC	1 cut(s)	652
BanI	GGYRCC	2 cut(s)	592, 2324
BanII	GRGCYC	4 cut(s)	388, 912, 1541, 2391
BarI	GAAGNNNNNNTAC	4 cut(s)	2317, 2349, 2457, 2489
BbsI	GAAGAC	3 cut(s)	183, 745, 1701
Bbv12I	GWGCWC	6 cut(s)	388, 541, 912, 1454, 1740, 3008
BbvI	GCAGC	8 cut(s)	126, 649, 753, 1187, 1933, 2008, 2756, 2955
BccI	CCATC	6 cut(s)	599, 656, 676, 719, 809, 2536
BceAI	ACGGC	5 cut(s)	247, 732, 833, 2002, 2916
BciT130I	CCWGG	4 cut(s)	259, 744, 1704, 2229
BciVI	GTATCC	1 cut(s)	822
BclI	TGATCA	3 cut(s)	565, 823, 2952
BcnI	CCSGG	1 cut(s)	398
BcoDI	GTCTC	2 cut(s)	1353, 2025
BfaI	CTAG	9 cut(s)	578, 1014, 1481, 1500, 1742, 1904, 2220, 2532, 2546
BfmI	CTRYAG	4 cut(s)	1354, 1551, 1990, 2909
BfrI	CTTAAG	1 cut(s)	551
BfuAI	ACCTGC	1 cut(s)	2916
BfuI	GTATCC	1 cut(s)	822
BglII	AGATCT	1 cut(s)	1065
BlpI	GCTNAGC	1 cut(s)	831
BmcAI	AGTACT	2 cut(s)	794, 2320
Bme1390I	CCNGG	5 cut(s)	259, 398, 744, 1704, 2229
Bme18I	GGWCC	1 cut(s)	888
BmeT110I	CYCGRG	6 cut(s)	381, 534, 770, 944, 1838, 2876
BmgBI	CACGTC	1 cut(s)	1122
BmgT120I	GGNCC	3 cut(s)	345, 400, 888
BmrFI	CCNGG	5 cut(s)	259, 398, 744, 1704, 2229
BpiI	GAAGAC	3 cut(s)	183, 745, 1701
BplI	GAGNNNNNCTC	2 cut(s)	517, 549
BpmI	CTGGAG	1 cut(s)	509
Bpu10I	CCTNAGC	1 cut(s)	582
Bpu1102I	GCTNAGC	1 cut(s)	831
BpuEI	CTTGAG	4 cut(s)	992, 1562, 2290, 2593
BpuMI	CCSGG	1 cut(s)	398
BsaBI	GATNNNNATC	2 cut(s)	420, 609
BsaHI	GRCGYC	2 cut(s)	222, 252
BsaJI	CCNNGG	9 cut(s)	35, 257, 815, 855, 945, 1703, 1957, 2083, 2350
BsaWI	WCCGGW	3 cut(s)	147, 424, 595
BsaXI	ACNNNNNCTCC	6 cut(s)	68, 71, 98, 101, 281, 311
Bse118I	RCCGGY	1 cut(s)	595
Bse1I	ACTGG	5 cut(s)	1116, 1369, 2140, 2326, 2477
Bse3DI	GCAATG	3 cut(s)	1042, 1150, 2382
Bse8I	GATNNNNATC	2 cut(s)	420, 609
BseAI	TCCGGA	1 cut(s)	147
BseBI	CCWGG	4 cut(s)	259, 744, 1704, 2229
BseDI	CCNNGG	9 cut(s)	35, 257, 815, 855, 945, 1703, 1957, 2083, 2350
BseGI	GGATG	7 cut(s)	610, 687, 2285, 2544, 2557, 2673, 2872
BseJI	GATNNNNATC	2 cut(s)	420, 609
BseMI	GCAATG	3 cut(s)	1042, 1150, 2382
BseMII	CTCAG	8 cut(s)	596, 845, 938, 1053, 1130, 1878, 2065, 2795
BseNI	ACTGG	5 cut(s)	1116, 1369, 2140, 2326, 2477
BsePI	GCGCGC	1 cut(s)	1406
BseRI	GAGGAG	4 cut(s)	76, 327, 2495, 2740
BseSI	GKGCMC	4 cut(s)	595, 1740, 2700, 2846
BseXI	GCAGC	8 cut(s)	126, 649, 753, 1187, 1933, 2008, 2756, 2955
BseYI	CCCAGC	1 cut(s)	2246
Bsh1236I	CGCG	2 cut(s)	186, 1408
Bsh1285I	CGRYCG	2 cut(s)	184, 1688
BshFI	GGCC	6 cut(s)	262, 347, 401, 747, 1280, 2017
BshNI	GGYRCC	2 cut(s)	592, 2324
BshTI	ACCGGT	1 cut(s)	595
BsiEI	CGRYCG	2 cut(s)	184, 1688
BsiHKAI	GWGCWC	6 cut(s)	388, 541, 912, 1454, 1740, 3008
BsiHKCI	CYCGRG	6 cut(s)	381, 534, 770, 944, 1838, 2876
BsiSI	CCGG	5 cut(s)	148, 398, 425, 596, 2360
BslFI	GGGAC	4 cut(s)	239, 457, 1321, 2253
BsmAI	GTCTC	2 cut(s)	1353, 2025
BsmBI	CGTCTC	1 cut(s)	2025
BsmFI	GGGAC	4 cut(s)	239, 457, 1321, 2253
BsmI	GAATGC	3 cut(s)	502, 1673, 2921
BsnI	GGCC	6 cut(s)	262, 347, 401, 747, 1280, 2017
BsoBI	CYCGRG	6 cut(s)	381, 534, 770, 944, 1838, 2876
Bsp13I	TCCGGA	1 cut(s)	147
Bsp1720I	GCTNAGC	1 cut(s)	831
Bsp19I	CCATGG	1 cut(s)	35
BspANI	GGCC	6 cut(s)	262, 347, 401, 747, 1280, 2017
BspCNI	CTCAG	8 cut(s)	595, 844, 937, 1054, 1129, 1879, 2064, 2796
BspEI	TCCGGA	1 cut(s)	147
BspFNI	CGCG	2 cut(s)	186, 1408
BspMAI	CTGCAG	2 cut(s)	1358, 2913
BspMI	ACCTGC	1 cut(s)	2916
BspQI	GCTCTTC	1 cut(s)	393
BspT107I	GGYRCC	2 cut(s)	592, 2324
BspTI	CTTAAG	1 cut(s)	551
BsrDI	GCAATG	3 cut(s)	1042, 1150, 2382
BsrFI	RCCGGY	1 cut(s)	595
BsrI	ACTGG	5 cut(s)	1116, 1369, 2140, 2326, 2477
BssAI	RCCGGY	1 cut(s)	595
BssECI	CCNNGG	9 cut(s)	35, 257, 815, 855, 945, 1703, 1957, 2083, 2350
BssHII	GCGCGC	1 cut(s)	1406
BssNI	GRCGYC	2 cut(s)	222, 252
BssT1I	CCWWGG	5 cut(s)	35, 855, 1957, 2083, 2350
Bst2UI	CCWGG	4 cut(s)	259, 744, 1704, 2229
Bst4CI	ACNGT	8 cut(s)	506, 888, 1196, 1514, 1761, 2045, 2605, 2695
Bst6I	CTCTTC	6 cut(s)	232, 393, 983, 1169, 1722, 2227
BstACI	GRCGYC	2 cut(s)	222, 252
BstAFI	CTTAAG	1 cut(s)	551
BstAPI	GCANNNNNTGC	1 cut(s)	766
BstC8I	GCNNGC	4 cut(s)	378, 1348, 1408, 2015
BstDEI	CTNAG	8 cut(s)	582, 831, 924, 1062, 1116, 1887, 2051, 2804
BstDSI	CCRYGG	2 cut(s)	35, 815
BstF5I	GGATG	7 cut(s)	610, 687, 2285, 2544, 2557, 2673, 2872
BstFNI	CGCG	2 cut(s)	186, 1408
BstHHI	GCGC	5 cut(s)	188, 433, 1408, 1410, 1986
BstMAI	GTCTC	2 cut(s)	1353, 2025
BstMCI	CGRYCG	2 cut(s)	184, 1688
BstMWI	GCNNNNNNNGC	5 cut(s)	766, 974, 1325, 1374, 2900
BstNI	CCWGG	4 cut(s)	259, 744, 1704, 2229
BstNSI	RCATGY	4 cut(s)	575, 1222, 1264, 1414
BstSCI	CCNGG	5 cut(s)	257, 396, 742, 1702, 2227
BstSFI	CTRYAG	4 cut(s)	1354, 1551, 1990, 2909
BstSLI	GKGCMC	4 cut(s)	595, 1740, 2700, 2846
BstUI	CGCG	2 cut(s)	186, 1408
BstV1I	GCAGC	8 cut(s)	126, 649, 753, 1187, 1933, 2008, 2756, 2955
BstV2I	GAAGAC	3 cut(s)	183, 745, 1701
BstX2I	RGATCY	7 cut(s)	273, 652, 1065, 1744, 2257, 2775, 2800
BstYI	RGATCY	7 cut(s)	273, 652, 1065, 1744, 2257, 2775, 2800
BsuI	GTATCC	1 cut(s)	822
BsuRI	GGCC	6 cut(s)	262, 347, 401, 747, 1280, 2017
BtgI	CCRYGG	2 cut(s)	35, 815
BtgZI	GCGATG	1 cut(s)	1124
BtrI	CACGTC	1 cut(s)	1122
BtsCI	GGATG	7 cut(s)	610, 687, 2285, 2544, 2557, 2673, 2872
BtsIMutI	CAGTG	3 cut(s)	1109, 2700, 3006
BveI	ACCTGC	1 cut(s)	2916
Cac8I	GCNNGC	4 cut(s)	378, 1348, 1408, 2015
CaiI	CAGNNNCTG	1 cut(s)	2519
CfoI	GCGC	5 cut(s)	188, 433, 1408, 1410, 1986
Cfr10I	RCCGGY	1 cut(s)	595
Cfr13I	GGNCC	3 cut(s)	345, 400, 888
CseI	GACGC	1 cut(s)	230
Csp6I	GTAC	8 cut(s)	620, 793, 1182, 1397, 2319, 2325, 2474, 2860
CspAI	ACCGGT	1 cut(s)	595
CspCI	CAANNNNNGTGG	2 cut(s)	1215, 1250
CviQI	GTAC	8 cut(s)	620, 793, 1182, 1397, 2319, 2325, 2474, 2860
DdeI	CTNAG	8 cut(s)	582, 831, 924, 1062, 1116, 1887, 2051, 2804
EaeI	YGGCCR	3 cut(s)	260, 745, 2015
Eam1104I	CTCTTC	6 cut(s)	232, 393, 983, 1169, 1722, 2227
EarI	CTCTTC	6 cut(s)	232, 393, 983, 1169, 1722, 2227
Ecl136II	GAGCTC	2 cut(s)	386, 910
Eco130I	CCWWGG	5 cut(s)	35, 855, 1957, 2083, 2350
Eco147I	AGGCCT	1 cut(s)	1280
Eco24I	GRGCYC	4 cut(s)	388, 912, 1541, 2391
Eco32I	GATATC	2 cut(s)	247, 2761
Eco47I	GGWCC	1 cut(s)	888
Eco53kI	GAGCTC	2 cut(s)	386, 910
Eco57I	CTGAAG	3 cut(s)	615, 2442, 2541
Eco88I	CYCGRG	6 cut(s)	381, 534, 770, 944, 1838, 2876
EcoICRI	GAGCTC	2 cut(s)	386, 910
EcoRII	CCWGG	4 cut(s)	257, 742, 1702, 2227
EcoRV	GATATC	2 cut(s)	247, 2761
EcoT14I	CCWWGG	5 cut(s)	35, 855, 1957, 2083, 2350
EcoT22I	ATGCAT	4 cut(s)	1140, 1673, 2409, 2921
EcoT38I	GRGCYC	4 cut(s)	388, 912, 1541, 2391
ErhI	CCWWGG	5 cut(s)	35, 855, 1957, 2083, 2350
Esp3I	CGTCTC	1 cut(s)	2025
FalI	AAGNNNNNCTT	2 cut(s)	2375, 2407
FaqI	GGGAC	4 cut(s)	239, 457, 1321, 2253
FauI	CCCGC	2 cut(s)	325, 2018
FbaI	TGATCA	3 cut(s)	565, 823, 2952
FblI	GTMKAC	1 cut(s)	1242
FokI	GGATG	7 cut(s)	617, 694, 2272, 2551, 2564, 2660, 2879
FriOI	GRGCYC	4 cut(s)	388, 912, 1541, 2391
FspBI	CTAG	9 cut(s)	578, 1014, 1481, 1500, 1742, 1904, 2220, 2532, 2546
GlaI	GCGC	5 cut(s)	187, 432, 1407, 1409, 1985
GsaI	CCCAGC	1 cut(s)	2250
GsuI	CTGGAG	1 cut(s)	509
HaeIII	GGCC	6 cut(s)	262, 347, 401, 747, 1280, 2017
HapII	CCGG	5 cut(s)	148, 398, 425, 596, 2360
HgaI	GACGC	1 cut(s)	230
HhaI	GCGC	5 cut(s)	188, 433, 1408, 1410, 1986
Hin1I	GRCGYC	2 cut(s)	222, 252
Hin6I	GCGC	5 cut(s)	186, 431, 1406, 1408, 1984
HinP1I	GCGC	5 cut(s)	186, 431, 1406, 1408, 1984
HincII	GTYRAC	3 cut(s)	361, 1422, 2041
HindII	GTYRAC	3 cut(s)	361, 1422, 2041
HindIII	AAGCTT	3 cut(s)	982, 1632, 2063
HpaI	GTTAAC	1 cut(s)	1422
HpaII	CCGG	5 cut(s)	148, 398, 425, 596, 2360
HphI	GGTGA	2 cut(s)	2102, 2217
Hpy99I	CGWCG	3 cut(s)	224, 254, 326
HpyAV	CCTTC	4 cut(s)	133, 1034, 1604, 2087
HpyCH4III	ACNGT	8 cut(s)	506, 888, 1196, 1514, 1761, 2045, 2605, 2695
HpyCH4IV	ACGT	3 cut(s)	252, 1121, 1529
HpyF10VI	GCNNNNNNNGC	5 cut(s)	766, 974, 1325, 1374, 2900
HpyF3I	CTNAG	8 cut(s)	582, 831, 924, 1062, 1116, 1887, 2051, 2804
HpySE526I	ACGT	3 cut(s)	252, 1121, 1529
Hsp92I	GRCGYC	2 cut(s)	222, 252
HspAI	GCGC	5 cut(s)	186, 431, 1406, 1408, 1984
Kpn2I	TCCGGA	1 cut(s)	147
KpnI	GGTACC	1 cut(s)	2328
Ksp22I	TGATCA	3 cut(s)	565, 823, 2952
KspAI	GTTAAC	1 cut(s)	1422
LguI	GCTCTTC	1 cut(s)	393
Lsp1109I	GCAGC	8 cut(s)	126, 649, 753, 1187, 1933, 2008, 2756, 2955
MaeI	CTAG	9 cut(s)	578, 1014, 1481, 1500, 1742, 1904, 2220, 2532, 2546
MaeII	ACGT	3 cut(s)	252, 1121, 1529
MaeIII	GTNAC	2 cut(s)	1104, 2731
MflI	RGATCY	7 cut(s)	273, 652, 1065, 1744, 2257, 2775, 2800
MlyI	GAGTC	5 cut(s)	566, 772, 2119, 2201, 2952
MmeI	TCCRAC	7 cut(s)	114, 192, 246, 312, 630, 984, 2814
Mph1103I	ATGCAT	4 cut(s)	1140, 1673, 2409, 2921
MroI	TCCGGA	1 cut(s)	147
MroXI	GAANNNNTTC	2 cut(s)	1488, 2669
MseI	TTAA	8 cut(s)	519, 552, 1058, 1421, 1763, 1938, 2600, 2828
MslI	CAYNNNNRTG	5 cut(s)	161, 598, 840, 1143, 1812
MspA1I	CMGCKG	1 cut(s)	2013
MspCI	CTTAAG	1 cut(s)	551
MspI	CCGG	5 cut(s)	148, 398, 425, 596, 2360
MspR9I	CCNGG	5 cut(s)	259, 398, 744, 1704, 2229
Mva1269I	GAATGC	3 cut(s)	502, 1673, 2921
MvaI	CCWGG	4 cut(s)	259, 744, 1704, 2229
MvnI	CGCG	2 cut(s)	186, 1408
MwoI	GCNNNNNNNGC	5 cut(s)	766, 974, 1325, 1374, 2900
NciI	CCSGG	1 cut(s)	398
NcoI	CCATGG	1 cut(s)	35
NmeAIII	GCCGAG	1 cut(s)	115
NsiI	ATGCAT	4 cut(s)	1140, 1673, 2409, 2921
NspI	RCATGY	4 cut(s)	575, 1222, 1264, 1414
OliI	CACNNNNGTG	2 cut(s)	598, 1812
PaeR7I	CTCGAG	2 cut(s)	534, 2876
PauI	GCGCGC	1 cut(s)	1406
PceI	AGGCCT	1 cut(s)	1280
PciI	ACATGT	1 cut(s)	1260
PciSI	GCTCTTC	1 cut(s)	393
PcsI	WCGNNNNNNNCGW	2 cut(s)	249, 541
PctI	GAATGC	3 cut(s)	502, 1673, 2921
PdmI	GAANNNNTTC	2 cut(s)	1488, 2669
PflFI	GACNNNGTC	1 cut(s)	2465
PflMI	CCANNNNNTGG	1 cut(s)	2267
PinAI	ACCGGT	1 cut(s)	595
Ple19I	CGATCG	1 cut(s)	1688
PleI	GAGTC	5 cut(s)	565, 772, 2118, 2201, 2952
PpsI	GAGTC	5 cut(s)	565, 772, 2118, 2201, 2952
PscI	ACATGT	1 cut(s)	1260
Psp124BI	GAGCTC	2 cut(s)	388, 912
Psp6I	CCWGG	4 cut(s)	257, 742, 1702, 2227
PspFI	CCCAGC	1 cut(s)	2246
PspGI	CCWGG	4 cut(s)	257, 742, 1702, 2227
PspPI	GGNCC	3 cut(s)	345, 400, 888
PspXI	VCTCGAGB	2 cut(s)	534, 2876
PstI	CTGCAG	2 cut(s)	1358, 2913
PstNI	CAGNNNCTG	1 cut(s)	2519
PsuI	RGATCY	7 cut(s)	273, 652, 1065, 1744, 2257, 2775, 2800
PsyI	GACNNNGTC	1 cut(s)	2465
PteI	GCGCGC	1 cut(s)	1406
PvuI	CGATCG	1 cut(s)	1688
RsaI	GTAC	8 cut(s)	621, 794, 1183, 1398, 2320, 2326, 2475, 2861
RsaNI	GTAC	8 cut(s)	620, 793, 1182, 1397, 2319, 2325, 2474, 2860
RseI	CAYNNNNRTG	5 cut(s)	161, 598, 840, 1143, 1812
SacI	GAGCTC	2 cut(s)	388, 912
SapI	GCTCTTC	1 cut(s)	393
SaqAI	TTAA	8 cut(s)	519, 552, 1058, 1421, 1763, 1938, 2600, 2828
Sau96I	GGNCC	3 cut(s)	345, 400, 888
SbfI	CCTGCAGG	1 cut(s)	2913
ScaI	AGTACT	2 cut(s)	794, 2320
SchI	GAGTC	5 cut(s)	566, 772, 2119, 2201, 2952
ScrFI	CCNGG	5 cut(s)	259, 398, 744, 1704, 2229
SdaI	CCTGCAGG	1 cut(s)	2913
SfcI	CTRYAG	4 cut(s)	1354, 1551, 1990, 2909
Sfr274I	CTCGAG	2 cut(s)	534, 2876
SgrAI	CRCCGGYG	1 cut(s)	595
SinI	GGWCC	1 cut(s)	888
SlaI	CTCGAG	2 cut(s)	534, 2876
SmiMI	CAYNNNNRTG	5 cut(s)	161, 598, 840, 1143, 1812
SmlI	CTYRAG	7 cut(s)	534, 551, 971, 1577, 2305, 2572, 2876
SmoI	CTYRAG	7 cut(s)	534, 551, 971, 1577, 2305, 2572, 2876
Sse8387I	CCTGCAGG	1 cut(s)	2913
SseBI	AGGCCT	1 cut(s)	1280
SspI	AATATT	1 cut(s)	1922
SspMI	CTAG	9 cut(s)	578, 1014, 1481, 1500, 1742, 1904, 2220, 2532, 2546
SstI	GAGCTC	2 cut(s)	388, 912
StuI	AGGCCT	1 cut(s)	1280
StyD4I	CCNGG	5 cut(s)	257, 396, 742, 1702, 2227
StyI	CCWWGG	5 cut(s)	35, 855, 1957, 2083, 2350
TaaI	ACNGT	8 cut(s)	506, 888, 1196, 1514, 1761, 2045, 2605, 2695
TaiI	ACGT	3 cut(s)	255, 1124, 1532
TatI	WGTACW	5 cut(s)	619, 792, 1396, 2318, 2859
TauI	GCSGC	2 cut(s)	1167, 1498
Tru1I	TTAA	8 cut(s)	519, 552, 1058, 1421, 1763, 1938, 2600, 2828
Tru9I	TTAA	8 cut(s)	519, 552, 1058, 1421, 1763, 1938, 2600, 2828
TscAI	CASTG	3 cut(s)	1116, 2700, 3013
TseI	GCWGC	8 cut(s)	139, 637, 766, 1200, 1946, 1996, 2744, 2943
TspGWI	ACGGA	2 cut(s)	397, 459
TspRI	CASTG	3 cut(s)	1116, 2700, 3013
Tth111I	GACNNNGTC	1 cut(s)	2465
Van91I	CCANNNNNTGG	1 cut(s)	2267
Vha464I	CTTAAG	1 cut(s)	551
VneI	GTGCAC	1 cut(s)	1736
VpaK11BI	GGWCC	1 cut(s)	888
XapI	RAATTY	3 cut(s)	957, 1484, 2925
XbaI	TCTAGA	3 cut(s)	1480, 1903, 2531
XceI	RCATGY	4 cut(s)	575, 1222, 1264, 1414
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1231, 2628
XhoI	CTCGAG	2 cut(s)	534, 2876
XmiI	GTMKAC	1 cut(s)	1242
XmnI	GAANNNNTTC	2 cut(s)	1488, 2669
XspI	CTAG	9 cut(s)	578, 1014, 1481, 1500, 1742, 1904, 2220, 2532, 2546
ZraI	GACGTC	1 cut(s)	253
ZrmI	AGTACT	2 cut(s)	794, 2320
Zsp2I	ATGCAT	4 cut(s)	1140, 1673, 2409, 2921

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.