AAA-type ATPase family protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G62130 AT1G62130 AT4G24860 AT4G24860 AT4G24860 AT4G24860 |
| fragaria_vesca | FvH4_5g08070 FvH4_5g08070 |
| malus_domestica | MD06G1143300.v1.1 MD14G1158300.v1.1 |
| prunus_persica | Prupe.5G152500_v2.0.a1 Prupe.5G152500_v2.0.a1 |
| pyrus_communis | pycom06g13290 pycom06g13300 pycom14g13190 pycom14g13200 pycom14g13210 |
| rosa_chinensis | RchiOBHm_Chr7g0190401 |
| rosa_laevigata | RLG00000004536 |
| rosa_multiflora | Rmu_co8223142.1_g000001 Rmu_co8252631.1_g000001 Rmu_co8344673.1_g000001 Rmu_sc0028964.1_g000001 Rmu_sc0028964.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00264670 |
| rosa_rugosa | Rorug06G0504400 Rorug06G0504400 |
| rosa_samantha | Rh7AG110200 Rh7BG112700 Rh7CG115000 Rh7DG113200 |
| rosa_wichuraiana | Rw7G009560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 2154, 2185 |
| AatII | GACGTC | 1 cut(s) | 239 |
| AbsI | CCTCGAGG | 1 cut(s) | 1112 |
| Acc16I | TGCGCA | 2 cut(s) | 258, 2135 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 121, 194 |
| AccII | CGCG | 1 cut(s) | 2818 |
| AccIII | TCCGGA | 1 cut(s) | 3335 |
| AclWI | GGATC | 7 cut(s) | 676, 1749, 2094, 2214, 2282, 3327, 3340 |
| AcoI | YGGCCR | 1 cut(s) | 2727 |
| AcsI | RAATTY | 6 cut(s) | 392, 438, 747, 922, 2324, 2571 |
| AcuI | CTGAAG | 3 cut(s) | 1007, 1596, 2222 |
| AcvI | CACGTG | 1 cut(s) | 2801 |
| AcyI | GRCGYC | 1 cut(s) | 236 |
| AfaI | GTAC | 2 cut(s) | 306, 1862 |
| AfeI | AGCGCT | 1 cut(s) | 3297 |
| AflII | CTTAAG | 1 cut(s) | 3086 |
| AflIII | ACRYGT | 2 cut(s) | 2878, 3363 |
| AjiI | CACGTC | 2 cut(s) | 2153, 2184 |
| AjnI | CCWGG | 2 cut(s) | 595, 2590 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2226, 2258 |
| AleI | CACNNNNGTG | 2 cut(s) | 2799, 3250 |
| Alw21I | GWGCWC | 3 cut(s) | 1311, 2016, 2372 |
| AlwI | GGATC | 7 cut(s) | 676, 1749, 2094, 2214, 2282, 3327, 3340 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1067, 3281 |
| Ama87I | CYCGRG | 3 cut(s) | 1112, 1729, 2310 |
| Aor13HI | TCCGGA | 1 cut(s) | 3335 |
| Aor51HI | AGCGCT | 1 cut(s) | 3297 |
| AoxI | GGCC | 4 cut(s) | 2525, 2727, 2782, 2906 |
| ApeKI | GCWGC | 9 cut(s) | 63, 227, 587, 956, 1376, 2894, 3107, 3161, 3343 |
| ApoI | RAATTY | 6 cut(s) | 392, 438, 747, 922, 2324, 2571 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2099, 2131 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 751, 873, 2880 |
| AspLEI | GCGC | 5 cut(s) | 259, 447, 712, 2136, 3298 |
| AspS9I | GGNCC | 5 cut(s) | 724, 1055, 1559, 2585, 2887 |
| AsuC2I | CCSGG | 1 cut(s) | 12 |
| AsuHPI | GGTGA | 7 cut(s) | 563, 817, 1679, 1957, 2702, 2708, 3056 |
| AsuII | TTCGAA | 1 cut(s) | 2105 |
| AvaI | CYCGRG | 3 cut(s) | 1112, 1729, 2310 |
| AvaII | GGWCC | 5 cut(s) | 724, 1055, 1559, 2585, 2887 |
| BaeGI | GKGCMC | 1 cut(s) | 2473 |
| BalI | TGGCCA | 1 cut(s) | 2729 |
| BamHI | GGATCC | 1 cut(s) | 3332 |
| BanII | GRGCYC | 3 cut(s) | 1311, 2016, 2372 |
| BbrPI | CACGTG | 1 cut(s) | 2801 |
| BbsI | GAAGAC | 3 cut(s) | 379, 1966, 3024 |
| Bbv12I | GWGCWC | 3 cut(s) | 1311, 2016, 2372 |
| BbvI | GCAGC | 9 cut(s) | 75, 214, 599, 943, 1363, 2906, 3094, 3148, 3355 |
| BccI | CCATC | 9 cut(s) | 88, 112, 122, 288, 715, 1253, 1646, 2241, 2950 |
| BceAI | ACGGC | 2 cut(s) | 751, 2540 |
| BciT130I | CCWGG | 2 cut(s) | 597, 2592 |
| BciVI | GTATCC | 2 cut(s) | 369, 1518 |
| BclI | TGATCA | 1 cut(s) | 1315 |
| BcnI | CCSGG | 1 cut(s) | 12 |
| BfmI | CTRYAG | 4 cut(s) | 579, 615, 1403, 1575 |
| BfoI | RGCGCY | 2 cut(s) | 713, 3299 |
| BfrI | CTTAAG | 1 cut(s) | 3086 |
| BfuI | GTATCC | 2 cut(s) | 369, 1518 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 221 |
| BglII | AGATCT | 1 cut(s) | 74 |
| Bme1390I | CCNGG | 3 cut(s) | 12, 597, 2592 |
| Bme18I | GGWCC | 5 cut(s) | 724, 1055, 1559, 2585, 2887 |
| BmeT110I | CYCGRG | 3 cut(s) | 1112, 1729, 2310 |
| BmgBI | CACGTC | 2 cut(s) | 2153, 2184 |
| BmgT120I | GGNCC | 5 cut(s) | 724, 1055, 1559, 2585, 2887 |
| BmiI | GGNNCC | 5 cut(s) | 612, 1057, 1413, 1560, 3334 |
| BmrFI | CCNGG | 3 cut(s) | 12, 597, 2592 |
| BmrI | ACTGGG | 1 cut(s) | 2430 |
| BmuI | ACTGGG | 1 cut(s) | 2430 |
| BpiI | GAAGAC | 3 cut(s) | 379, 1966, 3024 |
| BpmI | CTGGAG | 1 cut(s) | 216 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1236, 2295 |
| Bpu14I | TTCGAA | 1 cut(s) | 2105 |
| BpuEI | CTTGAG | 4 cut(s) | 1925, 2195, 2495, 3156 |
| BpuMI | CCSGG | 1 cut(s) | 12 |
| BsaAI | YACGTR | 2 cut(s) | 2801, 3366 |
| BsaBI | GATNNNNATC | 4 cut(s) | 79, 340, 1605, 2286 |
| BsaHI | GRCGYC | 1 cut(s) | 236 |
| BsaI | GGTCTC | 1 cut(s) | 467 |
| BsaJI | CCNNGG | 5 cut(s) | 326, 477, 519, 1037, 3319 |
| BsaWI | WCCGGW | 1 cut(s) | 3335 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 130, 160 |
| Bse118I | RCCGGY | 1 cut(s) | 1343 |
| Bse1I | ACTGG | 5 cut(s) | 693, 2436, 2508, 2602, 2730 |
| Bse3DI | GCAATG | 2 cut(s) | 460, 847 |
| Bse8I | GATNNNNATC | 4 cut(s) | 79, 340, 1605, 2286 |
| BseAI | TCCGGA | 1 cut(s) | 3335 |
| BseBI | CCWGG | 2 cut(s) | 597, 2592 |
| BseDI | CCNNGG | 5 cut(s) | 326, 477, 519, 1037, 3319 |
| BseGI | GGATG | 8 cut(s) | 104, 689, 796, 1264, 2056, 2168, 2199, 2252 |
| BseJI | GATNNNNATC | 4 cut(s) | 79, 340, 1605, 2286 |
| BseMI | GCAATG | 2 cut(s) | 460, 847 |
| BseMII | CTCAG | 7 cut(s) | 424, 1244, 1779, 1821, 1944, 2088, 2879 |
| BseNI | ACTGG | 5 cut(s) | 693, 2436, 2508, 2602, 2730 |
| BseRI | GAGGAG | 1 cut(s) | 1365 |
| BseSI | GKGCMC | 1 cut(s) | 2473 |
| BseXI | GCAGC | 9 cut(s) | 75, 214, 599, 943, 1363, 2906, 3094, 3148, 3355 |
| BsgI | GTGCAG | 1 cut(s) | 336 |
| Bsh1236I | CGCG | 1 cut(s) | 2818 |
| BshFI | GGCC | 4 cut(s) | 2527, 2729, 2784, 2908 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1311, 2016, 2372 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1112, 1729, 2310 |
| BsiSI | CCGG | 5 cut(s) | 11, 33, 1344, 1415, 3336 |
| BslFI | GGGAC | 9 cut(s) | 27, 1041, 1572, 1585, 1970, 2725, 2864, 2976, 3010 |
| BsmBI | CGTCTC | 4 cut(s) | 1076, 2171, 3234, 3274 |
| BsmFI | GGGAC | 9 cut(s) | 27, 1041, 1572, 1585, 1970, 2725, 2864, 2976, 3010 |
| BsnI | GGCC | 4 cut(s) | 2527, 2729, 2784, 2908 |
| Bso31I | GGTCTC | 1 cut(s) | 467 |
| BsoBI | CYCGRG | 3 cut(s) | 1112, 1729, 2310 |
| Bsp119I | TTCGAA | 1 cut(s) | 2105 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1311, 2016, 2372, 2473 |
| Bsp13I | TCCGGA | 1 cut(s) | 3335 |
| Bsp1407I | TGTACA | 1 cut(s) | 304 |
| Bsp19I | CCATGG | 1 cut(s) | 477 |
| BspANI | GGCC | 4 cut(s) | 2527, 2729, 2784, 2908 |
| BspCNI | CTCAG | 7 cut(s) | 423, 1245, 1780, 1822, 1943, 2089, 2878 |
| BspEI | TCCGGA | 1 cut(s) | 3335 |
| BspFNI | CGCG | 1 cut(s) | 2818 |
| BspHI | TCATGA | 1 cut(s) | 2838 |
| BspLI | GGNNCC | 5 cut(s) | 612, 1057, 1413, 1560, 3334 |
| BspMAI | CTGCAG | 1 cut(s) | 619 |
| BspPI | GGATC | 7 cut(s) | 676, 1749, 2094, 2214, 2282, 3327, 3340 |
| BspT104I | TTCGAA | 1 cut(s) | 2105 |
| BspTI | CTTAAG | 1 cut(s) | 3086 |
| BspTNI | GGTCTC | 1 cut(s) | 467 |
| BsrDI | GCAATG | 2 cut(s) | 460, 847 |
| BsrFI | RCCGGY | 1 cut(s) | 1343 |
| BsrGI | TGTACA | 1 cut(s) | 304 |
| BsrI | ACTGG | 5 cut(s) | 693, 2436, 2508, 2602, 2730 |
| BssAI | RCCGGY | 1 cut(s) | 1343 |
| BssECI | CCNNGG | 5 cut(s) | 326, 477, 519, 1037, 3319 |
| BssNI | GRCGYC | 1 cut(s) | 236 |
| BssT1I | CCWWGG | 2 cut(s) | 477, 1037 |
| Bst2UI | CCWGG | 2 cut(s) | 597, 2592 |
| Bst4CI | ACNGT | 8 cut(s) | 311, 348, 357, 1407, 2228, 2855, 2940, 3116 |
| Bst6I | CTCTTC | 2 cut(s) | 2402, 2782 |
| BstACI | GRCGYC | 1 cut(s) | 236 |
| BstAFI | CTTAAG | 1 cut(s) | 3086 |
| BstAUI | TGTACA | 1 cut(s) | 304 |
| BstBAI | YACGTR | 2 cut(s) | 2801, 3366 |
| BstBI | TTCGAA | 1 cut(s) | 2105 |
| BstC8I | GCNNGC | 5 cut(s) | 261, 1460, 2613, 2777, 3265 |
| BstDSI | CCRYGG | 3 cut(s) | 326, 477, 3319 |
| BstEII | GGTNACC | 1 cut(s) | 2258 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 2565, 2921 |
| BstF5I | GGATG | 8 cut(s) | 104, 689, 796, 1264, 2056, 2168, 2199, 2252 |
| BstFNI | CGCG | 1 cut(s) | 2818 |
| BstH2I | RGCGCY | 2 cut(s) | 713, 3299 |
| BstHHI | GCGC | 5 cut(s) | 259, 447, 712, 2136, 3298 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 174, 221, 227, 878, 1232, 2633, 2781, 3167 |
| BstNI | CCWGG | 2 cut(s) | 597, 2592 |
| BstNSI | RCATGY | 3 cut(s) | 1462, 1994, 2779 |
| BstPI | GGTNACC | 1 cut(s) | 2258 |
| BstSCI | CCNGG | 3 cut(s) | 10, 595, 2590 |
| BstSFI | CTRYAG | 4 cut(s) | 579, 615, 1403, 1575 |
| BstSLI | GKGCMC | 1 cut(s) | 2473 |
| BstUI | CGCG | 1 cut(s) | 2818 |
| BstV1I | GCAGC | 9 cut(s) | 75, 214, 599, 943, 1363, 2906, 3094, 3148, 3355 |
| BstV2I | GAAGAC | 3 cut(s) | 379, 1966, 3024 |
| BstX2I | RGATCY | 4 cut(s) | 74, 1741, 2206, 3332 |
| BstYI | RGATCY | 4 cut(s) | 74, 1741, 2206, 3332 |
| BsuI | GTATCC | 2 cut(s) | 369, 1518 |
| BsuRI | GGCC | 4 cut(s) | 2527, 2729, 2784, 2908 |
| BtgI | CCRYGG | 3 cut(s) | 326, 477, 3319 |
| BtgZI | GCGATG | 1 cut(s) | 651 |
| BtrI | CACGTC | 2 cut(s) | 2153, 2184 |
| BtsCI | GGATG | 8 cut(s) | 104, 689, 796, 1264, 2056, 2168, 2199, 2252 |
| BtsI | GCAGTG | 1 cut(s) | 2628 |
| BtsIMutI | CAGTG | 5 cut(s) | 1250, 1440, 2233, 2443, 2628 |
| Cac8I | GCNNGC | 5 cut(s) | 261, 1460, 2613, 2777, 3265 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1067, 3281 |
| CciI | TCATGA | 1 cut(s) | 2838 |
| CfoI | GCGC | 5 cut(s) | 259, 447, 712, 2136, 3298 |
| Cfr10I | RCCGGY | 1 cut(s) | 1343 |
| Cfr13I | GGNCC | 5 cut(s) | 724, 1055, 1559, 2585, 2887 |
| CseI | GACGC | 2 cut(s) | 3251, 3256 |
| CsiI | ACCWGGT | 1 cut(s) | 595 |
| Csp6I | GTAC | 2 cut(s) | 305, 1861 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2604, 2639 |
| CviQI | GTAC | 2 cut(s) | 305, 1861 |
| DraI | TTTAAA | 1 cut(s) | 3222 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 2154, 2185 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 2154, 2185 |
| EaeI | YGGCCR | 1 cut(s) | 2727 |
| Eam1104I | CTCTTC | 2 cut(s) | 2402, 2782 |
| EarI | CTCTTC | 2 cut(s) | 2402, 2782 |
| Ecl136II | GAGCTC | 3 cut(s) | 1309, 2014, 2370 |
| Eco130I | CCWWGG | 2 cut(s) | 477, 1037 |
| Eco24I | GRGCYC | 3 cut(s) | 1311, 2016, 2372 |
| Eco31I | GGTCTC | 1 cut(s) | 467 |
| Eco32I | GATATC | 1 cut(s) | 2491 |
| Eco47I | GGWCC | 5 cut(s) | 724, 1055, 1559, 2585, 2887 |
| Eco47III | AGCGCT | 1 cut(s) | 3297 |
| Eco53kI | GAGCTC | 3 cut(s) | 1309, 2014, 2370 |
| Eco57I | CTGAAG | 3 cut(s) | 1007, 1596, 2222 |
| Eco72I | CACGTG | 1 cut(s) | 2801 |
| Eco88I | CYCGRG | 3 cut(s) | 1112, 1729, 2310 |
| Eco91I | GGTNACC | 1 cut(s) | 2258 |
| EcoICRI | GAGCTC | 3 cut(s) | 1309, 2014, 2370 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 2565, 2921 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1559 |
| EcoO65I | GGTNACC | 1 cut(s) | 2258 |
| EcoRI | GAATTC | 2 cut(s) | 438, 2571 |
| EcoRII | CCWGG | 2 cut(s) | 595, 2590 |
| EcoRV | GATATC | 1 cut(s) | 2491 |
| EcoT14I | CCWWGG | 2 cut(s) | 477, 1037 |
| EcoT22I | ATGCAT | 2 cut(s) | 691, 2847 |
| EcoT38I | GRGCYC | 3 cut(s) | 1311, 2016, 2372 |
| ErhI | CCWWGG | 2 cut(s) | 477, 1037 |
| Esp3I | CGTCTC | 4 cut(s) | 1076, 2171, 3234, 3274 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 944, 976, 2105, 2137, 2559, 2591 |
| FaqI | GGGAC | 9 cut(s) | 27, 1041, 1572, 1585, 1970, 2725, 2864, 2976, 3010 |
| FauI | CCCGC | 3 cut(s) | 57, 97, 1066 |
| FauNDI | CATATG | 2 cut(s) | 301, 495 |
| FbaI | TGATCA | 1 cut(s) | 1315 |
| FokI | GGATG | 8 cut(s) | 91, 676, 803, 1271, 2063, 2175, 2206, 2259 |
| FriOI | GRGCYC | 3 cut(s) | 1311, 2016, 2372 |
| FspI | TGCGCA | 2 cut(s) | 258, 2135 |
| GlaI | GCGC | 5 cut(s) | 258, 446, 711, 2135, 3297 |
| GsuI | CTGGAG | 1 cut(s) | 216 |
| HaeII | RGCGCY | 2 cut(s) | 713, 3299 |
| HaeIII | GGCC | 4 cut(s) | 2527, 2729, 2784, 2908 |
| HapII | CCGG | 5 cut(s) | 11, 33, 1344, 1415, 3336 |
| HgaI | GACGC | 2 cut(s) | 3251, 3256 |
| HhaI | GCGC | 5 cut(s) | 259, 447, 712, 2136, 3298 |
| Hin1I | GRCGYC | 1 cut(s) | 236 |
| Hin6I | GCGC | 5 cut(s) | 257, 445, 710, 2134, 3296 |
| HinP1I | GCGC | 5 cut(s) | 257, 445, 710, 2134, 3296 |
| HincII | GTYRAC | 3 cut(s) | 733, 760, 1762 |
| HindII | GTYRAC | 3 cut(s) | 733, 760, 1762 |
| HindIII | AAGCTT | 2 cut(s) | 825, 1286 |
| HpaI | GTTAAC | 2 cut(s) | 760, 1762 |
| HpaII | CCGG | 5 cut(s) | 11, 33, 1344, 1415, 3336 |
| HphI | GGTGA | 7 cut(s) | 563, 817, 1679, 1957, 2702, 2708, 3056 |
| Hpy99I | CGWCG | 6 cut(s) | 59, 238, 241, 2151, 2154, 2185 |
| HpyCH4III | ACNGT | 8 cut(s) | 311, 348, 357, 1407, 2228, 2855, 2940, 3116 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 174, 221, 227, 878, 1232, 2633, 2781, 3167 |
| Hsp92I | GRCGYC | 1 cut(s) | 236 |
| HspAI | GCGC | 5 cut(s) | 257, 445, 710, 2134, 3296 |
| Kpn2I | TCCGGA | 1 cut(s) | 3335 |
| Ksp22I | TGATCA | 1 cut(s) | 1315 |
| KspAI | GTTAAC | 2 cut(s) | 760, 1762 |
| LmnI | GCTCC | 2 cut(s) | 1411, 2011 |
| Lsp1109I | GCAGC | 9 cut(s) | 75, 214, 599, 943, 1363, 2906, 3094, 3148, 3355 |
| MabI | ACCWGGT | 1 cut(s) | 595 |
| MflI | RGATCY | 4 cut(s) | 74, 1741, 2206, 3332 |
| MhlI | GDGCHC | 4 cut(s) | 1311, 2016, 2372, 2473 |
| MlsI | TGGCCA | 1 cut(s) | 2729 |
| MluNI | TGGCCA | 1 cut(s) | 2729 |
| MlyI | GAGTC | 7 cut(s) | 194, 725, 1256, 1388, 2331, 2857, 3287 |
| MmeI | TCCRAC | 4 cut(s) | 102, 212, 1041, 1389 |
| Mox20I | TGGCCA | 1 cut(s) | 2729 |
| Mph1103I | ATGCAT | 2 cut(s) | 691, 2847 |
| MroI | TCCGGA | 1 cut(s) | 3335 |
| MroXI | GAANNNNTTC | 3 cut(s) | 751, 873, 2880 |
| MscI | TGGCCA | 1 cut(s) | 2729 |
| MseI | TTAA | 9 cut(s) | 759, 1737, 1761, 2495, 2552, 2826, 2996, 3087, 3221 |
| MslI | CAYNNNNRTG | 4 cut(s) | 2660, 2680, 2799, 3250 |
| Msp20I | TGGCCA | 1 cut(s) | 2729 |
| MspA1I | CMGCKG | 1 cut(s) | 66 |
| MspCI | CTTAAG | 1 cut(s) | 3086 |
| MspI | CCGG | 5 cut(s) | 11, 33, 1344, 1415, 3336 |
| MspR9I | CCNGG | 3 cut(s) | 12, 597, 2592 |
| MvaI | CCWGG | 2 cut(s) | 597, 2592 |
| MvnI | CGCG | 1 cut(s) | 2818 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 174, 221, 227, 878, 1232, 2633, 2781, 3167 |
| NciI | CCSGG | 1 cut(s) | 12 |
| NcoI | CCATGG | 1 cut(s) | 477 |
| NdeI | CATATG | 2 cut(s) | 301, 495 |
| NlaIV | GGNNCC | 5 cut(s) | 612, 1057, 1413, 1560, 3334 |
| NmeAIII | GCCGAG | 1 cut(s) | 544 |
| NmuCI | GTSAC | 6 cut(s) | 6, 551, 805, 1106, 1248, 2438 |
| NsbI | TGCGCA | 2 cut(s) | 258, 2135 |
| NsiI | ATGCAT | 2 cut(s) | 691, 2847 |
| NspI | RCATGY | 3 cut(s) | 1462, 1994, 2779 |
| NspV | TTCGAA | 1 cut(s) | 2105 |
| OliI | CACNNNNGTG | 2 cut(s) | 2799, 3250 |
| PaeI | GCATGC | 2 cut(s) | 1462, 2779 |
| PaeR7I | CTCGAG | 3 cut(s) | 1112, 1729, 2310 |
| PagI | TCATGA | 1 cut(s) | 2838 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2944 |
| PdmI | GAANNNNTTC | 3 cut(s) | 751, 873, 2880 |
| PfeI | GAWTC | 9 cut(s) | 23, 155, 770, 1033, 1388, 1438, 1489, 1606, 3091 |
| PflFI | GACNNNGTC | 2 cut(s) | 2154, 2185 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 121, 194 |
| PfoI | TCCNGGA | 1 cut(s) | 2590 |
| PleI | GAGTC | 7 cut(s) | 194, 724, 1255, 1388, 2331, 2857, 3286 |
| PmaCI | CACGTG | 1 cut(s) | 2801 |
| PmlI | CACGTG | 1 cut(s) | 2801 |
| PpsI | GAGTC | 7 cut(s) | 194, 724, 1255, 1388, 2331, 2857, 3286 |
| Ppu21I | YACGTR | 2 cut(s) | 2801, 3366 |
| PpuMI | RGGWCCY | 1 cut(s) | 1559 |
| Psp124BI | GAGCTC | 3 cut(s) | 1311, 2016, 2372 |
| Psp5II | RGGWCCY | 1 cut(s) | 1559 |
| Psp6I | CCWGG | 2 cut(s) | 595, 2590 |
| PspCI | CACGTG | 1 cut(s) | 2801 |
| PspEI | GGTNACC | 1 cut(s) | 2258 |
| PspGI | CCWGG | 2 cut(s) | 595, 2590 |
| PspN4I | GGNNCC | 5 cut(s) | 612, 1057, 1413, 1560, 3334 |
| PspPI | GGNCC | 5 cut(s) | 724, 1055, 1559, 2585, 2887 |
| PspPPI | RGGWCCY | 1 cut(s) | 1559 |
| PspXI | VCTCGAGB | 2 cut(s) | 1112, 1729 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1853, 1885 |
| PstI | CTGCAG | 1 cut(s) | 619 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1067, 3281 |
| PsuI | RGATCY | 4 cut(s) | 74, 1741, 2206, 3332 |
| PsyI | GACNNNGTC | 2 cut(s) | 2154, 2185 |
| RsaI | GTAC | 2 cut(s) | 306, 1862 |
| RsaNI | GTAC | 2 cut(s) | 305, 1861 |
| RseI | CAYNNNNRTG | 4 cut(s) | 2660, 2680, 2799, 3250 |
| SacI | GAGCTC | 3 cut(s) | 1311, 2016, 2372 |
| SaqAI | TTAA | 9 cut(s) | 759, 1737, 1761, 2495, 2552, 2826, 2996, 3087, 3221 |
| Sau96I | GGNCC | 5 cut(s) | 724, 1055, 1559, 2585, 2887 |
| SbfI | CCTGCAGG | 1 cut(s) | 619 |
| SchI | GAGTC | 7 cut(s) | 194, 725, 1256, 1388, 2331, 2857, 3287 |
| ScrFI | CCNGG | 3 cut(s) | 12, 597, 2592 |
| SdaI | CCTGCAGG | 1 cut(s) | 619 |
| SduI | GDGCHC | 4 cut(s) | 1311, 2016, 2372, 2473 |
| SexAI | ACCWGGT | 1 cut(s) | 595 |
| SfcI | CTRYAG | 4 cut(s) | 579, 615, 1403, 1575 |
| Sfr274I | CTCGAG | 3 cut(s) | 1112, 1729, 2310 |
| SfuI | TTCGAA | 1 cut(s) | 2105 |
| SinI | GGWCC | 5 cut(s) | 724, 1055, 1559, 2585, 2887 |
| SlaI | CTCGAG | 3 cut(s) | 1112, 1729, 2310 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 2660, 2680, 2799, 3250 |
| SmlI | CTYRAG | 8 cut(s) | 1112, 1729, 1940, 2174, 2310, 2474, 3086, 3171 |
| SmoI | CTYRAG | 8 cut(s) | 1112, 1729, 1940, 2174, 2310, 2474, 3086, 3171 |
| SphI | GCATGC | 2 cut(s) | 1462, 2779 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 619 |
| SspI | AATATT | 2 cut(s) | 861, 1131 |
| SstI | GAGCTC | 3 cut(s) | 1311, 2016, 2372 |
| StyD4I | CCNGG | 3 cut(s) | 10, 595, 2590 |
| StyI | CCWWGG | 2 cut(s) | 477, 1037 |
| TaaI | ACNGT | 8 cut(s) | 311, 348, 357, 1407, 2228, 2855, 2940, 3116 |
| TaqI | TCGA | 7 cut(s) | 334, 719, 1113, 1730, 1854, 2105, 2311 |
| TatI | WGTACW | 2 cut(s) | 304, 1860 |
| TauI | GCSGC | 4 cut(s) | 69, 135, 224, 227 |
| TfiI | GAWTC | 9 cut(s) | 23, 155, 770, 1033, 1388, 1438, 1489, 1606, 3091 |
| Tru1I | TTAA | 9 cut(s) | 759, 1737, 1761, 2495, 2552, 2826, 2996, 3087, 3221 |
| Tru9I | TTAA | 9 cut(s) | 759, 1737, 1761, 2495, 2552, 2826, 2996, 3087, 3221 |
| TscAI | CASTG | 5 cut(s) | 1257, 1440, 2233, 2443, 2628 |
| TseFI | GTSAC | 6 cut(s) | 6, 551, 805, 1106, 1248, 2438 |
| TseI | GCWGC | 9 cut(s) | 63, 227, 587, 956, 1376, 2894, 3107, 3161, 3343 |
| Tsp45I | GTSAC | 6 cut(s) | 6, 551, 805, 1106, 1248, 2438 |
| TspDTI | ATGAA | 8 cut(s) | 405, 903, 963, 1046, 1520, 2638, 2823, 2827 |
| TspGWI | ACGGA | 6 cut(s) | 31, 72, 417, 522, 1707, 1794 |
| TspRI | CASTG | 5 cut(s) | 1257, 1440, 2233, 2443, 2628 |
| Tth111I | GACNNNGTC | 2 cut(s) | 2154, 2185 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 121, 194 |
| Vha464I | CTTAAG | 1 cut(s) | 3086 |
| VpaK11BI | GGWCC | 5 cut(s) | 724, 1055, 1559, 2585, 2887 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 2565, 2921 |
| XapI | RAATTY | 6 cut(s) | 392, 438, 747, 922, 2324, 2571 |
| XbaI | TCTAGA | 2 cut(s) | 469, 628 |
| XceI | RCATGY | 3 cut(s) | 1462, 1994, 2779 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3326 |
| XhoI | CTCGAG | 3 cut(s) | 1112, 1729, 2310 |
| XmnI | GAANNNNTTC | 3 cut(s) | 751, 873, 2880 |
| ZraI | GACGTC | 1 cut(s) | 237 |
| Zsp2I | ATGCAT | 2 cut(s) | 691, 2847 |