Rh7CG115000

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0004286
Physical Location & Seq
Forward (+)
8868591 .. 8878948
10358 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG115000.1

Sequence Viewer

Length: 3594 bp
ATGGTTTCAACGAGGAGAAGTGGATCTCTCTCCGGCAATAACAGTAAAAGATCGTCGTCTTCCGACGACAACAAGCCTCAGTCGCCGAAGCGGCAGAAGGTGGATAACAATGGAGTTGGTTCGGAGAAAACGGAGAATTCGAAGGAAGTTTGTACGCCGGCCACGGCGGCGGCTGATCCCGGAGAATGCAGCGCCGCCGGCGAGGCTCAGACGGCCGGAGACGGCGCGACTTCTGTAAAGACTGAAGCTTCTGCACAAGCCGTGGCGGTGACCCCGCCGCCTGTGGCTGAAGGTGCTGCAGGGTCTTCGCCGGCAGCTGTGCTGGATAAGGCGAGGACTTCCTTTTTGGCATGGAGTTCCTATCAGAAGCAGAGCCTGAATTCGGGGAGTTTCGAGTTGACAACACCTTGGTGCAAGCTTCTGTCACAGTCTGGACAGAATCTAAACATTGCTATCACCACATCGATTTTTACAATTGGTTCGAGTAGAAGCAGCAATTTCCCTCTGAAGGATAGTACTGTTAGTGCGTGTCTGTGCAAGATCAAACGCGAACAGCGGGAGAGCGGTGCTGTAACGATTATAGAAAGTATGGGAAACAAGGGATCACTGCAAGTAAATGGGGCGCATGTGAAGAAAGGCAACAGCTGCGTGCTCAACTCAGGTGATGAAGTGGTATTTGGTTCTCTGGGGAACCATGCTTATATTTTTCAACTACTTGTGGCGGAGGGTGCGGTCAAGGGTGCAGAGGTTCAAAGTGGTGTTGGAAAATATCTGCACCTTGACAGGAGAGCCGGAGATCCTTCAGATGTGGATGGGGCTTCCATACTGGCTTCTCTTAGCATGAGACCAGAACTATCACGATGGAAGTCTGCGGCTCAGACCACCAATAAAGTCCACCCAGGGGCTGAAGTACCAGCTCAGTCTGTTATTCGAGAAGGTACAGAAGTTGAGCTTGAAGAACTCGAAGGCAGCTTGACCCCAAACAGAACAACTGACAAAACAGAAGAGATTGGAGGAATCAACAAGAGTCTTACTCCAGACTGCAACCCAGATTCGGGTGTAGAGGCAGACAATGTAAAATTCTCTGGGATGAATGATTTGCTAGGGCCTTTATTGAGGATGTTAGCACGAACACCTAGTTATAAACTGAAATTGAGCAAAGGTATCTGTAAACAGGTATTGGAAGAAAAAAATGAGTGGACGAGGGATTCGCTGCCAGCATCAACGTCAGGCATGTCTGTGCGGTGTGCTGTTTTTAAAGAAGGCATTCATGCAGCAATTCTTGAAGGCAATAGCATGGATGTTTCATTTGATGATTTCCCGTACTATTTGAGTGAGAATACGAAGAATGTGCTGATTGCAGCTTCATTTATACACTTGAAACATAAAGAACATGCAAAGTATACTACAGAGCTTACCACTGTGAATCCTCGAATATTGCTCTCTGGTCCTGCAGGGTCTGAGATATACCAGGAGATGTTGGCAAAGGCACTTGCTCAATATTTCGGGGCTAAGTTGCTCATATTTGATAGCCAATCACTTTTGGGTGGTTTGTCATCAAAGGAAGCCGAGCTGCCCAAGGATGGGTCTAATGGAGATAAAATAAGCACCTTGGCCAAACCAAGTCCTGTTTCCACAGACTTGTCTAAGAGCATTGATCCATCAGTTTCTGAGCTAGAGGCACCAAGGTTGGCGCCAAGCTCTTCAAATGGACCTTCATATGGCCTGGAATCCCAACCTAAGACGGAGATTGACTCCATCGCTACATCCTCAGGGACATCTAAGAATTACGTGTTTAAAATAGGTGACAGAGTAAAGTTTATTGGTTTATCTTCGGGCAACTTATATCCTACAACATCTTCACGGGGCCCAGTACCTGGAGCCCGAGGAGAGGTTGCGTTGGTTTTTGAGGACAATCCTTTGTCAAAAATTGGTGTGAGGTTTGATAAACAAGTATTTGATGGTGTTGATCTTGGGGGTCTTTGTAAAGGAAATGGATTCTTCTGCAATGCCTCCGATCTTCGTTCAGAAAACACAGGTGCGGATGATCTGGATAAATTACTGATCAATACATTGTTTGAGGCTGTACATAGTGAGAGCAGAGGTTCTCCTTTCATTTTGTTCATGAAAGATGCGGAGAAGTCCCTTGTAGGAAATTCAGATTCATATTCCACATTCAGAGGCAGACTTGATAAGCTTCCTGATAATGTGGTTGTAATTGGCTCTCATACTCATACTGACAATCGCAAGGAGAAGTCGCATCCTGGTGGTCTACTTTTCACAAAGTTCGGTAGCAATCAAACTGCTCTTCTTGATTTGGCTTTTCCGGATAGTTTTGGAAGACTGCATGAAAGAGGGAAGGAAGTCCCCAAGGCAACAAAACTTCTGACGAAACTTTTTCCTAATAAAGTAACCATTCATATGCCACAGGATGAGGGACTTCTTGTCTCATGGAAACAGCAATTGGATCGTGATGCCGAAACCCTCAAAATGAAGGGAAATTTGAACCACTTGCGCACTGTTCTGGGTCGGTGTGGGATGGAATGTGAAGGACTTGATACGCTAAGCATCAAGGACCAAACACTTACAAATGAAAGTTCAGAGAAGGTAGTAGGATGGGCATTAAGCCATCATTTAATGGAGAATCCTGAAGCTGATCCAGAAACTAGAGTTGTTTTGTCTGCTGAGAGCATCAAGTACGGACTTGGAATCTTACAGTCTATCCAGAATGAAAATAAGAGCTTGAAGAAGTCACTTAAGGATGTTGTCACGGAAAATGAATTTGAGAAAAGGCTTTTGGCTGATGTTATCCCACCTACTGACATTGGAGTTACATTTGATGATATTGGCGCTCTTGAAAATGTGAAGGATACATTGAAAGAATTGGTGATGCTGCCTTTACAAAGGCCGGAGCTTTTCTGCAAAGGGCAATTAACCAAGCCTTGCAAAGGCATCCTTTTATTTGGTCCCCCGGGGACAGGCAAGACAATGCTGGCAAAGGCTGTGGCTACAGAAGCTGGTGCAAACTTCATCAACATATCCATGTCGAGCATCACATCTAAGTGGTTTGGTGAGGGTGAGAAGTATGTGAAAGCTGTTTTCTCTCTAGCTAGTAAAATTGCCCCTAGTGTCGTATTTGTTGATGAAGTTGACAGCATGTTGGGCCGGCGGGAAAATCCAGGGGAGCATGAGGCAATGCGCAAGATGAAAAATGAATTTATGGTAAATTGGGATGGGCTACGAACAAAAGAAGCAGAACGAGTTCTGGTACTTGCAGCCACAAATAGGCCTTTTGACCTTGATGAAGCTGTCATTCGAAGGCTGCCCCGAAGGTTGATGGTAAATTTGCCAGATGCTCCCAATAGGGCAAAGATATTAAGAGTCATATTGGCAAAAGAGGACTTATCTCCCGATGTTGATTTCGAGGCAATTGCGAGCATGTCAGATGGATATTCTGGAAGTGACCTTAAAAATCTATGCGTGGCTGCTGCACACCGTCCAATTAAAGAGATTTTGGAAAAGGAAAAGAAGGTATGTGTTTCTTTTTTCATTAGACATTTGAAAGCAAACTTAACTGTTGTCTTAAATTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA FHA

Protein Analysis

1197

Amino Acids

129.24

Weight (kDa)

6.44

Isoelectric Point (pI)

37.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FHA PF00498 158 - 227 3.2e-06 FHA domain
DUF7751 PF24933 847 - 906 1.3e-18 Domain of unknown function (DUF7751)
AAA PF00004 985 - 1115 1.4e-37 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 1138 - 1174 5.1e-12 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1143
Acc16I TGCGCA 2 cut(s) 2516, 3200
AccB1I GGYRCC 2 cut(s) 1681, 1693
AccB7I CCANNNNNTGG 1 cut(s) 1877
AccBSI CCGCTC 1 cut(s) 564
AccI GTMKAC 2 cut(s) 1403, 2272
AccII CGCG 2 cut(s) 227, 549
AccIII TCCGGA 1 cut(s) 2326
AclWI GGATC 7 cut(s) 31, 170, 610, 791, 1652, 2475, 2651
AcoI YGGCCR 3 cut(s) 159, 213, 1614
AcsI RAATTY 8 cut(s) 136, 379, 1079, 2155, 2500, 2780, 3215, 3343
AcuI CTGAAG 6 cut(s) 264, 309, 527, 786, 927, 2670
AcyI GRCGYC 1 cut(s) 1694
AfaI GTAC 9 cut(s) 154, 517, 912, 940, 1325, 1875, 2088, 2699, 3270
AflII CTTAAG 1 cut(s) 2756
AflIII ACRYGT 1 cut(s) 1791
AhdI GACNNNNNGTC 1 cut(s) 2444
AjnI CCWGG 6 cut(s) 898, 1470, 1725, 1876, 2263, 3178
AjuI GAANNNNNNNTTGG 8 cut(s) 660, 692, 1615, 1647, 2447, 2479, 2780, 2812
AleI CACNNNNGTG 1 cut(s) 409
Alw21I GWGCWC 1 cut(s) 654
Alw26I GTCTC 3 cut(s) 213, 838, 2452
AlwI GGATC 7 cut(s) 31, 170, 610, 791, 1652, 2475, 2651
AlwNI CAGNNNCTG 6 cut(s) 376, 905, 1460, 1670, 1877, 3017
Ama87I CYCGRG 2 cut(s) 1884, 2971
Aor13HI TCCGGA 1 cut(s) 2326
AoxI GGCC 9 cut(s) 159, 213, 1106, 1614, 1723, 1867, 2906, 3163, 3287
ApaI GGGCCC 1 cut(s) 1871
ApoI RAATTY 8 cut(s) 136, 379, 1079, 2155, 2500, 2780, 3215, 3343
ArsI GACNNNNNNTTYG 4 cut(s) 328, 360, 1192, 1224
Asp700I GAANNNNTTC 2 cut(s) 1266, 3261
AspLEI GCGC 7 cut(s) 194, 227, 625, 1696, 2517, 2852, 3201
AspS9I GGNCC 8 cut(s) 1106, 1448, 1712, 1867, 1868, 2575, 2966, 3163
AsuC2I CCSGG 3 cut(s) 180, 2972, 2973
AsuHPI GGTGA 7 cut(s) 280, 448, 674, 1817, 2899, 3083, 3089
AsuII TTCGAA 2 cut(s) 140, 3316
AvaI CYCGRG 2 cut(s) 1884, 2971
AvaII GGWCC 4 cut(s) 1448, 1712, 2575, 2966
AxyI CCTNAGG 1 cut(s) 1771
BaeGI GKGCMC 1 cut(s) 1871
BaeI ACNNNNGTAYC 2 cut(s) 930, 963
BalI TGGCCA 1 cut(s) 1616
BanI GGYRCC 2 cut(s) 1681, 1693
BanII GRGCYC 2 cut(s) 1871, 1885
BbsI GAAGAC 3 cut(s) 51, 297, 2347
Bbv12I GWGCWC 1 cut(s) 654
BceAI ACGGC 4 cut(s) 180, 228, 238, 245
BcgI CGANNNNNNTGC 8 cut(s) 288, 322, 1333, 1367, 2450, 2484, 3413, 3447
BciT130I CCWGG 6 cut(s) 900, 1472, 1727, 1878, 2265, 3180
BciVI GTATCC 1 cut(s) 2863
BclI TGATCA 1 cut(s) 2064
BcnI CCSGG 3 cut(s) 180, 2972, 2973
BcoDI GTCTC 3 cut(s) 213, 838, 2452
BfaI CTAG 7 cut(s) 1103, 1137, 1676, 2667, 3107, 3111, 3126
BfmI CTRYAG 4 cut(s) 297, 1407, 1452, 3009
BfoI RGCGCY 3 cut(s) 195, 1697, 2853
BfrI CTTAAG 1 cut(s) 2756
BfuI GTATCC 1 cut(s) 2863
BglI GCCNNNNNGGC 3 cut(s) 91, 167, 203
BlpI GCTNAGC 1 cut(s) 2564
BmcAI AGTACT 1 cut(s) 517
Bme1390I CCNGG 9 cut(s) 180, 900, 1472, 1727, 1878, 2265, 2972, 2973, 3180
Bme18I GGWCC 4 cut(s) 1448, 1712, 2575, 2966
BmeRI GACNNNNNGTC 1 cut(s) 2444
BmeT110I CYCGRG 2 cut(s) 1884, 2971
BmgT120I GGNCC 8 cut(s) 1106, 1448, 1712, 1867, 1868, 2575, 2966, 3163
BmiI GGNNCC 7 cut(s) 692, 1683, 1695, 1868, 1869, 1882, 2968
BmrFI CCNGG 9 cut(s) 180, 900, 1472, 1727, 1878, 2265, 2972, 2973, 3180
BmrI ACTGGG 1 cut(s) 1865
BmuI ACTGGG 1 cut(s) 1865
BpiI GAAGAC 3 cut(s) 51, 297, 2347
BplI GAGNNNNNCTC 4 cut(s) 1018, 1050, 1739, 1771
BpmI CTGGAG 2 cut(s) 1020, 1899
Bpu1102I GCTNAGC 1 cut(s) 2564
Bpu14I TTCGAA 2 cut(s) 140, 3316
BpuMI CCSGG 3 cut(s) 180, 2972, 2973
Bsa29I ATCGAT 1 cut(s) 464
BsaAI YACGTR 1 cut(s) 1792
BsaHI GRCGYC 1 cut(s) 1694
BsaI GGTCTC 1 cut(s) 838
BsaWI WCCGGW 1 cut(s) 2326
Bse118I RCCGGY 4 cut(s) 157, 197, 310, 3165
Bse1I ACTGG 2 cut(s) 831, 1871
Bse21I CCTNAGG 1 cut(s) 1771
Bse3DI GCAATG 3 cut(s) 447, 2014, 3201
BseAI TCCGGA 1 cut(s) 2326
BseBI CCWGG 6 cut(s) 900, 1472, 1727, 1878, 2265, 3180
BseCI ATCGAT 1 cut(s) 464
BseMI GCAATG 3 cut(s) 447, 2014, 3201
BseMII CTCAG 9 cut(s) 92, 221, 672, 890, 932, 1452, 1662, 1785, 2676
BseNI ACTGG 2 cut(s) 831, 1871
BseRI GAGGAG 2 cut(s) 28, 1902
BseSI GKGCMC 1 cut(s) 1871
BseX3I CGGCCG 1 cut(s) 213
BsgI GTGCAG 4 cut(s) 237, 758, 762, 3474
Bsh1236I CGCG 2 cut(s) 227, 549
Bsh1285I CGRYCG 1 cut(s) 216
BshFI GGCC 9 cut(s) 161, 215, 1108, 1616, 1725, 1869, 2908, 3165, 3289
BshNI GGYRCC 2 cut(s) 1681, 1693
BshVI ATCGAT 1 cut(s) 464
BsiEI CGRYCG 1 cut(s) 216
BsiHKAI GWGCWC 1 cut(s) 654
BsiHKCI CYCGRG 2 cut(s) 1884, 2971
BslFI GGGAC 6 cut(s) 1789, 2128, 2351, 2451, 2952, 2989
BsmAI GTCTC 3 cut(s) 213, 838, 2452
BsmBI CGTCTC 1 cut(s) 213
BsmFI GGGAC 6 cut(s) 1789, 2128, 2351, 2451, 2952, 2989
BsmI GAATGC 2 cut(s) 191, 1266
BsnI GGCC 9 cut(s) 161, 215, 1108, 1616, 1725, 1869, 2908, 3165, 3289
Bso31I GGTCTC 1 cut(s) 838
BsoBI CYCGRG 2 cut(s) 1884, 2971
Bsp119I TTCGAA 2 cut(s) 140, 3316
Bsp120I GGGCCC 1 cut(s) 1867
Bsp1286I GDGCHC 3 cut(s) 654, 1871, 1885
Bsp13I TCCGGA 1 cut(s) 2326
Bsp1407I TGTACA 1 cut(s) 2086
Bsp1720I GCTNAGC 1 cut(s) 2564
BspANI GGCC 9 cut(s) 161, 215, 1108, 1616, 1725, 1869, 2908, 3165, 3289
BspCNI CTCAG 9 cut(s) 91, 220, 671, 889, 931, 1453, 1663, 1784, 2677
BspDI ATCGAT 1 cut(s) 464
BspEI TCCGGA 1 cut(s) 2326
BspFNI CGCG 2 cut(s) 227, 549
BspHI TCATGA 1 cut(s) 2124
BspLI GGNNCC 7 cut(s) 692, 1683, 1695, 1868, 1869, 1882, 2968
BspMAI CTGCAG 2 cut(s) 301, 1456
BspPI GGATC 7 cut(s) 31, 170, 610, 791, 1652, 2475, 2651
BspQI GCTCTTC 2 cut(s) 1708, 2313
BspT104I TTCGAA 2 cut(s) 140, 3316
BspT107I GGYRCC 2 cut(s) 1681, 1693
BspTI CTTAAG 1 cut(s) 2756
BspTNI GGTCTC 1 cut(s) 838
BsrBI CCGCTC 1 cut(s) 564
BsrDI GCAATG 3 cut(s) 447, 2014, 3201
BsrFI RCCGGY 4 cut(s) 157, 197, 310, 3165
BsrGI TGTACA 1 cut(s) 2086
BsrI ACTGG 2 cut(s) 831, 1871
BssAI RCCGGY 4 cut(s) 157, 197, 310, 3165
BssNAI GTATAC 1 cut(s) 1404
BssNI GRCGYC 1 cut(s) 1694
BssT1I CCWWGG 5 cut(s) 407, 1578, 1611, 1685, 2370
Bst1107I GTATAC 1 cut(s) 1404
Bst2UI CCWGG 6 cut(s) 900, 1472, 1727, 1878, 2265, 3180
Bst4CI ACNGT 8 cut(s) 44, 429, 520, 1423, 2521, 2718, 3497, 3577
Bst6I CTCTTC 3 cut(s) 999, 1708, 2313
BstACI GRCGYC 1 cut(s) 1694
BstAFI CTTAAG 1 cut(s) 2756
BstAPI GCANNNNNTGC 1 cut(s) 645
BstAUI TGTACA 1 cut(s) 2086
BstBAI YACGTR 1 cut(s) 1792
BstBI TTCGAA 2 cut(s) 140, 3316
BstC8I GCNNGC 9 cut(s) 159, 199, 312, 416, 650, 1218, 2994, 3167, 3436
BstDSI CCRYGG 2 cut(s) 162, 261
BstEII GGTNACC 1 cut(s) 268
BstENI CCTNNNNNAGG 1 cut(s) 2946
BstFNI CGCG 2 cut(s) 227, 549
BstH2I RGCGCY 3 cut(s) 195, 1697, 2853
BstHHI GCGC 7 cut(s) 194, 227, 625, 1696, 2517, 2852, 3201
BstMAI GTCTC 3 cut(s) 213, 838, 2452
BstMCI CGRYCG 1 cut(s) 216
BstNI CCWGG 6 cut(s) 900, 1472, 1727, 1878, 2265, 3180
BstNSI RCATGY 5 cut(s) 629, 1237, 1397, 3160, 3442
BstPI GGTNACC 1 cut(s) 268
BstSCI CCNGG 9 cut(s) 178, 898, 1470, 1725, 1876, 2263, 2970, 2971, 3178
BstSFI CTRYAG 4 cut(s) 297, 1407, 1452, 3009
BstSLI GKGCMC 1 cut(s) 1871
BstUI CGCG 2 cut(s) 227, 549
BstV2I GAAGAC 3 cut(s) 51, 297, 2347
BstX2I RGATCY 2 cut(s) 23, 796
BstYI RGATCY 2 cut(s) 23, 796
BstZ17I GTATAC 1 cut(s) 1404
BstZI CGGCCG 1 cut(s) 213
Bsu15I ATCGAT 1 cut(s) 464
Bsu36I CCTNAGG 1 cut(s) 1771
BsuI GTATCC 1 cut(s) 2863
BsuRI GGCC 9 cut(s) 161, 215, 1108, 1616, 1725, 1869, 2908, 3165, 3289
BsuTUI ATCGAT 1 cut(s) 464
BtgI CCRYGG 2 cut(s) 162, 261
BtgZI GCGATG 1 cut(s) 1744
BtsI GCAGTG 1 cut(s) 605
BtsIMutI CAGTG 3 cut(s) 605, 1419, 2517
Cac8I GCNNGC 9 cut(s) 159, 199, 312, 416, 650, 1218, 2994, 3167, 3436
CaiI CAGNNNCTG 6 cut(s) 376, 905, 1460, 1670, 1877, 3017
CciI TCATGA 1 cut(s) 2124
CfoI GCGC 7 cut(s) 194, 227, 625, 1696, 2517, 2852, 3201
Cfr10I RCCGGY 4 cut(s) 157, 197, 310, 3165
Cfr13I GGNCC 8 cut(s) 1106, 1448, 1712, 1867, 1868, 2575, 2966, 3163
Cfr9I CCCGGG 1 cut(s) 2971
ClaI ATCGAT 1 cut(s) 464
Csp6I GTAC 9 cut(s) 153, 516, 911, 939, 1324, 1874, 2087, 2698, 3269
CspCI CAANNNNNGTGG 2 cut(s) 2985, 3020
CviQI GTAC 9 cut(s) 153, 516, 911, 939, 1324, 1874, 2087, 2698, 3269
DinI GGCGCC 1 cut(s) 1695
DraI TTTAAA 2 cut(s) 1258, 1798
DriI GACNNNNNGTC 1 cut(s) 2444
EaeI YGGCCR 3 cut(s) 159, 213, 1614
EagI CGGCCG 1 cut(s) 213
Eam1104I CTCTTC 3 cut(s) 999, 1708, 2313
Eam1105I GACNNNNNGTC 1 cut(s) 2444
EarI CTCTTC 3 cut(s) 999, 1708, 2313
EciI GGCGGA 1 cut(s) 737
EclXI CGGCCG 1 cut(s) 213
Eco130I CCWWGG 5 cut(s) 407, 1578, 1611, 1685, 2370
Eco147I AGGCCT 1 cut(s) 3289
Eco24I GRGCYC 2 cut(s) 1871, 1885
Eco31I GGTCTC 1 cut(s) 838
Eco47I GGWCC 4 cut(s) 1448, 1712, 2575, 2966
Eco52I CGGCCG 1 cut(s) 213
Eco57I CTGAAG 6 cut(s) 264, 309, 527, 786, 927, 2670
Eco81I CCTNAGG 1 cut(s) 1771
Eco88I CYCGRG 2 cut(s) 1884, 2971
Eco91I GGTNACC 1 cut(s) 268
EcoNI CCTNNNNNAGG 1 cut(s) 2946
EcoO109I RGGNCCY 2 cut(s) 1106, 1867
EcoO65I GGTNACC 1 cut(s) 268
EcoRI GAATTC 2 cut(s) 136, 379
EcoRII CCWGG 6 cut(s) 898, 1470, 1725, 1876, 2263, 3178
EcoT14I CCWWGG 5 cut(s) 407, 1578, 1611, 1685, 2370
EcoT38I GRGCYC 2 cut(s) 1871, 1885
EgeI GGCGCC 1 cut(s) 1695
EheI GGCGCC 1 cut(s) 1695
ErhI CCWWGG 5 cut(s) 407, 1578, 1611, 1685, 2370
Esp3I CGTCTC 1 cut(s) 213
FalI AAGNNNNNCTT 4 cut(s) 936, 968, 2940, 2972
FaqI GGGAC 6 cut(s) 1789, 2128, 2351, 2451, 2952, 2989
FauI CCCGC 3 cut(s) 282, 549, 3162
FauNDI CATATG 2 cut(s) 1720, 2421
FbaI TGATCA 1 cut(s) 2064
FblI GTMKAC 2 cut(s) 1403, 2272
FriOI GRGCYC 2 cut(s) 1871, 1885
FspBI CTAG 7 cut(s) 1103, 1137, 1676, 2667, 3107, 3111, 3126
FspI TGCGCA 2 cut(s) 2516, 3200
GlaI GCGC 7 cut(s) 193, 226, 624, 1695, 2516, 2851, 3200
GsuI CTGGAG 2 cut(s) 1020, 1899
HaeII RGCGCY 3 cut(s) 195, 1697, 2853
HaeIII GGCC 9 cut(s) 161, 215, 1108, 1616, 1725, 1869, 2908, 3165, 3289
HhaI GCGC 7 cut(s) 194, 227, 625, 1696, 2517, 2852, 3201
Hin1I GRCGYC 1 cut(s) 1694
Hin6I GCGC 7 cut(s) 192, 225, 623, 1694, 2515, 2850, 3199
HinP1I GCGC 7 cut(s) 192, 225, 623, 1694, 2515, 2850, 3199
HincII GTYRAC 2 cut(s) 399, 3151
HindII GTYRAC 2 cut(s) 399, 3151
HindIII AAGCTT 3 cut(s) 246, 416, 2195
HphI GGTGA 7 cut(s) 280, 448, 674, 1817, 2899, 3083, 3089
Hpy166II GTNNAC 7 cut(s) 399, 895, 1172, 1200, 1404, 2273, 3151
Hpy8I GTNNAC 7 cut(s) 399, 895, 1172, 1200, 1404, 2273, 3151
Hpy99I CGWCG 2 cut(s) 58, 68
HpyCH4III ACNGT 8 cut(s) 44, 429, 520, 1423, 2521, 2718, 3497, 3577
HpyCH4IV ACGT 2 cut(s) 1226, 1791
HpySE526I ACGT 2 cut(s) 1226, 1791
Hsp92I GRCGYC 1 cut(s) 1694
HspAI GCGC 7 cut(s) 192, 225, 623, 1694, 2515, 2850, 3199
KasI GGCGCC 1 cut(s) 1693
Kpn2I TCCGGA 1 cut(s) 2326
KroI GCCGGC 4 cut(s) 157, 197, 310, 3165
KroNI GCCGGC 4 cut(s) 159, 199, 312, 3167
Ksp22I TGATCA 1 cut(s) 2064
LguI GCTCTTC 2 cut(s) 1708, 2313
LmnI GCTCC 4 cut(s) 1880, 2911, 3184, 3361
MaeI CTAG 7 cut(s) 1103, 1137, 1676, 2667, 3107, 3111, 3126
MaeII ACGT 2 cut(s) 1226, 1791
MaeIII GTNAC 9 cut(s) 268, 423, 571, 1805, 2410, 2751, 2767, 2830, 3461
MbiI CCGCTC 1 cut(s) 564
MfeI CAATTG 3 cut(s) 474, 2462, 3429
MflI RGATCY 2 cut(s) 23, 796
MhlI GDGCHC 3 cut(s) 654, 1871, 1885
MlsI TGGCCA 1 cut(s) 1616
MluNI TGGCCA 1 cut(s) 1616
Mly113I GGCGCC 1 cut(s) 1694
MlyI GAGTC 3 cut(s) 1036, 1748, 3390
MmeI TCCRAC 2 cut(s) 87, 742
Mox20I TGGCCA 1 cut(s) 1616
MreI CGCCGGCG 1 cut(s) 197
MroI TCCGGA 1 cut(s) 2326
MroNI GCCGGC 4 cut(s) 157, 197, 310, 3165
MroXI GAANNNNTTC 2 cut(s) 1266, 3261
MscI TGGCCA 1 cut(s) 1616
MslI CAYNNNNRTG 6 cut(s) 409, 1238, 2265, 2420, 3041, 3061
Msp20I TGGCCA 1 cut(s) 1616
MspA1I CMGCKG 3 cut(s) 317, 556, 645
MspCI CTTAAG 1 cut(s) 2756
MspR9I CCNGG 9 cut(s) 180, 900, 1472, 1727, 1878, 2265, 2972, 2973, 3180
MunI CAATTG 3 cut(s) 474, 2462, 3429
Mva1269I GAATGC 2 cut(s) 191, 1266
MvaI CCWGG 6 cut(s) 900, 1472, 1727, 1878, 2265, 3180
MvnI CGCG 2 cut(s) 227, 549
NaeI GCCGGC 4 cut(s) 159, 199, 312, 3167
NarI GGCGCC 1 cut(s) 1694
NciI CCSGG 3 cut(s) 180, 2972, 2973
NdeI CATATG 2 cut(s) 1720, 2421
NgoMIV GCCGGC 4 cut(s) 157, 197, 310, 3165
NlaIV GGNNCC 7 cut(s) 692, 1683, 1695, 1868, 1869, 1882, 2968
NmeAIII GCCGAG 1 cut(s) 1594
NmuCI GTSAC 6 cut(s) 268, 423, 1805, 2751, 2767, 3461
NsbI TGCGCA 2 cut(s) 2516, 3200
NspI RCATGY 5 cut(s) 629, 1237, 1397, 3160, 3442
NspV TTCGAA 2 cut(s) 140, 3316
OliI CACNNNNGTG 1 cut(s) 409
PagI TCATGA 1 cut(s) 2124
PasI CCCWGGG 1 cut(s) 899
PceI AGGCCT 1 cut(s) 3289
PciSI GCTCTTC 2 cut(s) 1708, 2313
PcsI WCGNNNNNNNCGW 1 cut(s) 137
PctI GAATGC 2 cut(s) 191, 1266
PdiI GCCGGC 4 cut(s) 159, 199, 312, 3167
PdmI GAANNNNTTC 2 cut(s) 1266, 3261
PflMI CCANNNNNTGG 1 cut(s) 1877
PfoI TCCNGGA 1 cut(s) 178
PleI GAGTC 3 cut(s) 1035, 1748, 3389
PluTI GGCGCC 1 cut(s) 1697
PpsI GAGTC 3 cut(s) 1035, 1748, 3389
Ppu21I YACGTR 1 cut(s) 1792
PsiI TTATAA 1 cut(s) 1143
Psp6I CCWGG 6 cut(s) 898, 1470, 1725, 1876, 2263, 3178
PspEI GGTNACC 1 cut(s) 268
PspGI CCWGG 6 cut(s) 898, 1470, 1725, 1876, 2263, 3178
PspN4I GGNNCC 7 cut(s) 692, 1683, 1695, 1868, 1869, 1882, 2968
PspOMI GGGCCC 1 cut(s) 1867
PspPI GGNCC 8 cut(s) 1106, 1448, 1712, 1867, 1868, 2575, 2966, 3163
PstI CTGCAG 2 cut(s) 301, 1456
PstNI CAGNNNCTG 6 cut(s) 376, 905, 1460, 1670, 1877, 3017
PsuI RGATCY 2 cut(s) 23, 796
PvuII CAGCTG 2 cut(s) 317, 645
RsaI GTAC 9 cut(s) 154, 517, 912, 940, 1325, 1875, 2088, 2699, 3270
RsaNI GTAC 9 cut(s) 153, 516, 911, 939, 1324, 1874, 2087, 2698, 3269
RseI CAYNNNNRTG 6 cut(s) 409, 1238, 2265, 2420, 3041, 3061
SapI GCTCTTC 2 cut(s) 1708, 2313
Sau96I GGNCC 8 cut(s) 1106, 1448, 1712, 1867, 1868, 2575, 2966, 3163
SbfI CCTGCAGG 1 cut(s) 1456
ScaI AGTACT 1 cut(s) 517
SchI GAGTC 3 cut(s) 1036, 1748, 3390
ScrFI CCNGG 9 cut(s) 180, 900, 1472, 1727, 1878, 2265, 2972, 2973, 3180
SdaI CCTGCAGG 1 cut(s) 1456
SduI GDGCHC 3 cut(s) 654, 1871, 1885
SfcI CTRYAG 4 cut(s) 297, 1407, 1452, 3009
SfoI GGCGCC 1 cut(s) 1695
SfuI TTCGAA 2 cut(s) 140, 3316
SgrAI CRCCGGYG 1 cut(s) 197
SinI GGWCC 4 cut(s) 1448, 1712, 2575, 2966
SmaI CCCGGG 1 cut(s) 2973
SmiMI CAYNNNNRTG 6 cut(s) 409, 1238, 2265, 2420, 3041, 3061
SmlI CTYRAG 1 cut(s) 2756
SmoI CTYRAG 1 cut(s) 2756
Sse8387I CCTGCAGG 1 cut(s) 1456
SseBI AGGCCT 1 cut(s) 3289
SspDI GGCGCC 1 cut(s) 1693
SspI AATATT 2 cut(s) 1437, 1502
SspMI CTAG 7 cut(s) 1103, 1137, 1676, 2667, 3107, 3111, 3126
StuI AGGCCT 1 cut(s) 3289
StyD4I CCNGG 9 cut(s) 178, 898, 1470, 1725, 1876, 2263, 2970, 2971, 3178
StyI CCWWGG 5 cut(s) 407, 1578, 1611, 1685, 2370
TaaI ACNGT 8 cut(s) 44, 429, 520, 1423, 2521, 2718, 3497, 3577
TaiI ACGT 2 cut(s) 1229, 1794
TatI WGTACW 2 cut(s) 515, 2086
TauI GCSGC 6 cut(s) 94, 170, 173, 197, 280, 875
TscAI CASTG 3 cut(s) 612, 1426, 2524
TseFI GTSAC 6 cut(s) 268, 423, 1805, 2751, 2767, 3461
Tsp45I GTSAC 6 cut(s) 268, 423, 1805, 2751, 2767, 3461
TspGWI ACGGA 4 cut(s) 146, 1760, 2715, 2786
TspMI CCCGGG 1 cut(s) 2971
TspRI CASTG 3 cut(s) 612, 1426, 2524
Van91I CCANNNNNTGG 1 cut(s) 1877
Vha464I CTTAAG 1 cut(s) 2756
VpaK11BI GGWCC 4 cut(s) 1448, 1712, 2575, 2966
XagI CCTNNNNNAGG 1 cut(s) 2946
XapI RAATTY 8 cut(s) 136, 379, 1079, 2155, 2500, 2780, 3215, 3343
XceI RCATGY 5 cut(s) 629, 1237, 1397, 3160, 3442
XmaI CCCGGG 1 cut(s) 2971
XmiI GTMKAC 2 cut(s) 1403, 2272
XmnI GAANNNNTTC 2 cut(s) 1266, 3261
XspI CTAG 7 cut(s) 1103, 1137, 1676, 2667, 3107, 3111, 3126
ZrmI AGTACT 1 cut(s) 517
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.