isoform X1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G62130 AT1G62130 AT4G24860 AT4G24860 AT4G24860 AT4G24860 |
| fragaria_vesca | FvH4_5g08070 FvH4_5g08070 |
| malus_domestica | MD06G1143300.v1.1 MD14G1158300.v1.1 |
| prunus_persica | Prupe.5G152500_v2.0.a1 Prupe.5G152500_v2.0.a1 |
| pyrus_communis | pycom06g13290 pycom06g13300 pycom14g13190 pycom14g13200 pycom14g13210 |
| rosa_chinensis | RchiOBHm_Chr7g0190401 |
| rosa_laevigata | RLG00000004536 |
| rosa_multiflora | Rmu_co8223142.1_g000001 Rmu_co8252631.1_g000001 Rmu_co8344673.1_g000001 Rmu_sc0028964.1_g000001 Rmu_sc0028964.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00264670 |
| rosa_rugosa | Rorug06G0504400 Rorug06G0504400 |
| rosa_samantha | Rh7AG110200 Rh7BG112700 Rh7CG115000 Rh7DG113200 |
| rosa_wichuraiana | Rw7G009560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1137 |
| Acc16I | TGCGCA | 2 cut(s) | 2513, 3197 |
| AccB1I | GGYRCC | 2 cut(s) | 1675, 1687 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1874 |
| AccBSI | CCGCTC | 1 cut(s) | 558 |
| AccI | GTMKAC | 2 cut(s) | 1397, 2269 |
| AccII | CGCG | 2 cut(s) | 230, 543 |
| AccIII | TCCGGA | 2 cut(s) | 1030, 2323 |
| AclWI | GGATC | 8 cut(s) | 31, 173, 604, 785, 1646, 2472, 2648, 3537 |
| AcoI | YGGCCR | 2 cut(s) | 159, 1608 |
| AcsI | RAATTY | 8 cut(s) | 136, 373, 1073, 2152, 2497, 2777, 3212, 3340 |
| AcuI | CTGAAG | 5 cut(s) | 312, 521, 780, 921, 2667 |
| AcyI | GRCGYC | 2 cut(s) | 824, 1688 |
| AdeI | CACNNNGTG | 1 cut(s) | 100 |
| AfaI | GTAC | 7 cut(s) | 906, 934, 1319, 1872, 2085, 2696, 3267 |
| AflII | CTTAAG | 1 cut(s) | 2753 |
| AflIII | ACRYGT | 1 cut(s) | 1785 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2441 |
| AjnI | CCWGG | 6 cut(s) | 892, 1464, 1719, 1873, 2260, 3175 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 654, 686, 1609, 1641, 2444, 2476, 2777, 2809 |
| Alw21I | GWGCWC | 2 cut(s) | 648, 3678 |
| Alw26I | GTCTC | 4 cut(s) | 216, 831, 832, 2449 |
| AlwI | GGATC | 8 cut(s) | 31, 173, 604, 785, 1646, 2472, 2648, 3537 |
| AlwNI | CAGNNNCTG | 6 cut(s) | 370, 899, 1454, 1664, 1874, 3014 |
| Ama87I | CYCGRG | 3 cut(s) | 652, 1881, 2968 |
| Aor13HI | TCCGGA | 2 cut(s) | 1030, 2323 |
| ApaI | GGGCCC | 1 cut(s) | 1868 |
| ApoI | RAATTY | 8 cut(s) | 136, 373, 1073, 2152, 2497, 2777, 3212, 3340 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1186, 1218 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1260, 3258 |
| AspLEI | GCGC | 7 cut(s) | 197, 230, 619, 1690, 2514, 2849, 3198 |
| AspS9I | GGNCC | 9 cut(s) | 1100, 1442, 1706, 1864, 1865, 2572, 2963, 3160, 3727 |
| AsuC2I | CCSGG | 3 cut(s) | 183, 2969, 2970 |
| AsuHPI | GGTGA | 7 cut(s) | 283, 442, 668, 1811, 2896, 3080, 3086 |
| AsuII | TTCGAA | 2 cut(s) | 140, 3313 |
| AvaI | CYCGRG | 3 cut(s) | 652, 1881, 2968 |
| AvaII | GGWCC | 4 cut(s) | 1442, 1706, 2572, 2963 |
| AxyI | CCTNAGG | 1 cut(s) | 1765 |
| BaeGI | GKGCMC | 1 cut(s) | 1868 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 924, 957 |
| BalI | TGGCCA | 1 cut(s) | 1610 |
| BanI | GGYRCC | 2 cut(s) | 1675, 1687 |
| BanII | GRGCYC | 3 cut(s) | 1868, 1882, 3678 |
| BbsI | GAAGAC | 3 cut(s) | 51, 291, 2344 |
| Bbv12I | GWGCWC | 2 cut(s) | 648, 3678 |
| BceAI | ACGGC | 3 cut(s) | 180, 241, 248 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 1327, 1361, 2447, 2481, 3410, 3444 |
| BciT130I | CCWGG | 6 cut(s) | 894, 1466, 1721, 1875, 2262, 3177 |
| BciVI | GTATCC | 1 cut(s) | 2860 |
| BclI | TGATCA | 1 cut(s) | 2061 |
| BcnI | CCSGG | 3 cut(s) | 183, 2969, 2970 |
| BcoDI | GTCTC | 4 cut(s) | 216, 831, 832, 2449 |
| BfaI | CTAG | 8 cut(s) | 1097, 1131, 1670, 2664, 3104, 3108, 3123, 3714 |
| BfmI | CTRYAG | 4 cut(s) | 1401, 1446, 3006, 3543 |
| BfoI | RGCGCY | 3 cut(s) | 198, 1691, 2850 |
| BfrI | CTTAAG | 1 cut(s) | 2753 |
| BfuI | GTATCC | 1 cut(s) | 2860 |
| BglI | GCCNNNNNGGC | 3 cut(s) | 91, 167, 206 |
| BlpI | GCTNAGC | 1 cut(s) | 2561 |
| Bme1390I | CCNGG | 9 cut(s) | 183, 894, 1466, 1721, 1875, 2262, 2969, 2970, 3177 |
| Bme18I | GGWCC | 4 cut(s) | 1442, 1706, 2572, 2963 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2441 |
| BmeT110I | CYCGRG | 3 cut(s) | 652, 1881, 2968 |
| BmgT120I | GGNCC | 9 cut(s) | 1100, 1442, 1706, 1864, 1865, 2572, 2963, 3160, 3727 |
| BmiI | GGNNCC | 7 cut(s) | 686, 1677, 1689, 1865, 1866, 1879, 2965 |
| BmrFI | CCNGG | 9 cut(s) | 183, 894, 1466, 1721, 1875, 2262, 2969, 2970, 3177 |
| BmrI | ACTGGG | 1 cut(s) | 1862 |
| BmuI | ACTGGG | 1 cut(s) | 1862 |
| BpiI | GAAGAC | 3 cut(s) | 51, 291, 2344 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1012, 1044, 1733, 1765 |
| BpmI | CTGGAG | 1 cut(s) | 1896 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2561 |
| Bpu14I | TTCGAA | 2 cut(s) | 140, 3313 |
| BpuMI | CCSGG | 3 cut(s) | 183, 2969, 2970 |
| BsaAI | YACGTR | 1 cut(s) | 1786 |
| BsaHI | GRCGYC | 2 cut(s) | 824, 1688 |
| BsaI | GGTCTC | 1 cut(s) | 832 |
| BsaWI | WCCGGW | 2 cut(s) | 1030, 2323 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1878, 1908 |
| Bse118I | RCCGGY | 4 cut(s) | 157, 200, 304, 3162 |
| Bse1I | ACTGG | 3 cut(s) | 825, 1868, 3642 |
| Bse21I | CCTNAGG | 1 cut(s) | 1765 |
| Bse3DI | GCAATG | 3 cut(s) | 441, 2011, 3198 |
| BseAI | TCCGGA | 2 cut(s) | 1030, 2323 |
| BseBI | CCWGG | 6 cut(s) | 894, 1466, 1721, 1875, 2262, 3177 |
| BseMI | GCAATG | 3 cut(s) | 441, 2011, 3198 |
| BseMII | CTCAG | 7 cut(s) | 92, 224, 884, 926, 1446, 1779, 2673 |
| BseNI | ACTGG | 3 cut(s) | 825, 1868, 3642 |
| BseRI | GAGGAG | 3 cut(s) | 28, 343, 1899 |
| BseSI | GKGCMC | 1 cut(s) | 1868 |
| BsgI | GTGCAG | 5 cut(s) | 240, 744, 752, 756, 3471 |
| Bsh1236I | CGCG | 2 cut(s) | 230, 543 |
| BshNI | GGYRCC | 2 cut(s) | 1675, 1687 |
| BsiHKAI | GWGCWC | 2 cut(s) | 648, 3678 |
| BsiHKCI | CYCGRG | 3 cut(s) | 652, 1881, 2968 |
| BslFI | GGGAC | 6 cut(s) | 1783, 2125, 2348, 2448, 2949, 2986 |
| BsmAI | GTCTC | 4 cut(s) | 216, 831, 832, 2449 |
| BsmBI | CGTCTC | 2 cut(s) | 216, 831 |
| BsmFI | GGGAC | 6 cut(s) | 1783, 2125, 2348, 2448, 2949, 2986 |
| BsmI | GAATGC | 2 cut(s) | 194, 1260 |
| Bso31I | GGTCTC | 1 cut(s) | 832 |
| BsoBI | CYCGRG | 3 cut(s) | 652, 1881, 2968 |
| Bsp119I | TTCGAA | 2 cut(s) | 140, 3313 |
| Bsp120I | GGGCCC | 1 cut(s) | 1864 |
| Bsp1286I | GDGCHC | 4 cut(s) | 648, 1868, 1882, 3678 |
| Bsp13I | TCCGGA | 2 cut(s) | 1030, 2323 |
| Bsp1407I | TGTACA | 1 cut(s) | 2083 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2561 |
| Bsp19I | CCATGG | 1 cut(s) | 344 |
| BspCNI | CTCAG | 7 cut(s) | 91, 223, 883, 925, 1447, 1778, 2674 |
| BspEI | TCCGGA | 2 cut(s) | 1030, 2323 |
| BspFNI | CGCG | 2 cut(s) | 230, 543 |
| BspHI | TCATGA | 2 cut(s) | 2121, 3625 |
| BspLI | GGNNCC | 7 cut(s) | 686, 1677, 1689, 1865, 1866, 1879, 2965 |
| BspMAI | CTGCAG | 1 cut(s) | 1450 |
| BspPI | GGATC | 8 cut(s) | 31, 173, 604, 785, 1646, 2472, 2648, 3537 |
| BspQI | GCTCTTC | 2 cut(s) | 1702, 2310 |
| BspT104I | TTCGAA | 2 cut(s) | 140, 3313 |
| BspT107I | GGYRCC | 2 cut(s) | 1675, 1687 |
| BspTI | CTTAAG | 1 cut(s) | 2753 |
| BspTNI | GGTCTC | 1 cut(s) | 832 |
| BsrBI | CCGCTC | 1 cut(s) | 558 |
| BsrDI | GCAATG | 3 cut(s) | 441, 2011, 3198 |
| BsrFI | RCCGGY | 4 cut(s) | 157, 200, 304, 3162 |
| BsrGI | TGTACA | 1 cut(s) | 2083 |
| BsrI | ACTGG | 3 cut(s) | 825, 1868, 3642 |
| BssAI | RCCGGY | 4 cut(s) | 157, 200, 304, 3162 |
| BssNAI | GTATAC | 1 cut(s) | 1398 |
| BssNI | GRCGYC | 2 cut(s) | 824, 1688 |
| BssT1I | CCWWGG | 6 cut(s) | 344, 401, 1572, 1605, 1679, 2367 |
| Bst1107I | GTATAC | 1 cut(s) | 1398 |
| Bst2UI | CCWGG | 6 cut(s) | 894, 1466, 1721, 1875, 2262, 3177 |
| Bst4CI | ACNGT | 8 cut(s) | 44, 423, 514, 571, 1417, 2518, 2715, 3494 |
| Bst6I | CTCTTC | 3 cut(s) | 993, 1702, 2310 |
| BstACI | GRCGYC | 2 cut(s) | 824, 1688 |
| BstAFI | CTTAAG | 1 cut(s) | 2753 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 639 |
| BstAUI | TGTACA | 1 cut(s) | 2083 |
| BstBAI | YACGTR | 1 cut(s) | 1786 |
| BstBI | TTCGAA | 2 cut(s) | 140, 3313 |
| BstC8I | GCNNGC | 9 cut(s) | 159, 202, 306, 410, 644, 1212, 2991, 3164, 3433 |
| BstDSI | CCRYGG | 3 cut(s) | 162, 264, 344 |
| BstEII | GGTNACC | 1 cut(s) | 271 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2943 |
| BstFNI | CGCG | 2 cut(s) | 230, 543 |
| BstH2I | RGCGCY | 3 cut(s) | 198, 1691, 2850 |
| BstHHI | GCGC | 7 cut(s) | 197, 230, 619, 1690, 2514, 2849, 3198 |
| BstMAI | GTCTC | 4 cut(s) | 216, 831, 832, 2449 |
| BstNI | CCWGG | 6 cut(s) | 894, 1466, 1721, 1875, 2262, 3177 |
| BstNSI | RCATGY | 5 cut(s) | 623, 1231, 1391, 3157, 3439 |
| BstPI | GGTNACC | 1 cut(s) | 271 |
| BstSCI | CCNGG | 9 cut(s) | 181, 892, 1464, 1719, 1873, 2260, 2967, 2968, 3175 |
| BstSFI | CTRYAG | 4 cut(s) | 1401, 1446, 3006, 3543 |
| BstSLI | GKGCMC | 1 cut(s) | 1868 |
| BstUI | CGCG | 2 cut(s) | 230, 543 |
| BstV2I | GAAGAC | 3 cut(s) | 51, 291, 2344 |
| BstX2I | RGATCY | 2 cut(s) | 23, 790 |
| BstYI | RGATCY | 2 cut(s) | 23, 790 |
| BstZ17I | GTATAC | 1 cut(s) | 1398 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1765 |
| BsuI | GTATCC | 1 cut(s) | 2860 |
| BtgI | CCRYGG | 3 cut(s) | 162, 264, 344 |
| BtgZI | GCGATG | 2 cut(s) | 1738, 3600 |
| BtsI | GCAGTG | 2 cut(s) | 599, 3586 |
| BtsIMutI | CAGTG | 5 cut(s) | 599, 1413, 2514, 3586, 3649 |
| Cac8I | GCNNGC | 9 cut(s) | 159, 202, 306, 410, 644, 1212, 2991, 3164, 3433 |
| CaiI | CAGNNNCTG | 6 cut(s) | 370, 899, 1454, 1664, 1874, 3014 |
| CciI | TCATGA | 2 cut(s) | 2121, 3625 |
| CfoI | GCGC | 7 cut(s) | 197, 230, 619, 1690, 2514, 2849, 3198 |
| Cfr10I | RCCGGY | 4 cut(s) | 157, 200, 304, 3162 |
| Cfr13I | GGNCC | 9 cut(s) | 1100, 1442, 1706, 1864, 1865, 2572, 2963, 3160, 3727 |
| Cfr9I | CCCGGG | 1 cut(s) | 2968 |
| CseI | GACGC | 1 cut(s) | 813 |
| Csp6I | GTAC | 7 cut(s) | 905, 933, 1318, 1871, 2084, 2695, 3266 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2982, 3017 |
| CviQI | GTAC | 7 cut(s) | 905, 933, 1318, 1871, 2084, 2695, 3266 |
| DinI | GGCGCC | 1 cut(s) | 1689 |
| DraI | TTTAAA | 3 cut(s) | 1252, 1792, 3616 |
| DraIII | CACNNNGTG | 1 cut(s) | 100 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2441 |
| EaeI | YGGCCR | 2 cut(s) | 159, 1608 |
| Eam1104I | CTCTTC | 3 cut(s) | 993, 1702, 2310 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2441 |
| EarI | CTCTTC | 3 cut(s) | 993, 1702, 2310 |
| EciI | GGCGGA | 1 cut(s) | 731 |
| Ecl136II | GAGCTC | 1 cut(s) | 3676 |
| Eco130I | CCWWGG | 6 cut(s) | 344, 401, 1572, 1605, 1679, 2367 |
| Eco147I | AGGCCT | 1 cut(s) | 3286 |
| Eco24I | GRGCYC | 3 cut(s) | 1868, 1882, 3678 |
| Eco31I | GGTCTC | 1 cut(s) | 832 |
| Eco47I | GGWCC | 4 cut(s) | 1442, 1706, 2572, 2963 |
| Eco53kI | GAGCTC | 1 cut(s) | 3676 |
| Eco57I | CTGAAG | 5 cut(s) | 312, 521, 780, 921, 2667 |
| Eco81I | CCTNAGG | 1 cut(s) | 1765 |
| Eco88I | CYCGRG | 3 cut(s) | 652, 1881, 2968 |
| Eco91I | GGTNACC | 1 cut(s) | 271 |
| EcoICRI | GAGCTC | 1 cut(s) | 3676 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2943 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1100, 1864, 3727 |
| EcoO65I | GGTNACC | 1 cut(s) | 271 |
| EcoRI | GAATTC | 2 cut(s) | 136, 373 |
| EcoRII | CCWGG | 6 cut(s) | 892, 1464, 1719, 1873, 2260, 3175 |
| EcoT14I | CCWWGG | 6 cut(s) | 344, 401, 1572, 1605, 1679, 2367 |
| EcoT38I | GRGCYC | 3 cut(s) | 1868, 1882, 3678 |
| EgeI | GGCGCC | 1 cut(s) | 1689 |
| EheI | GGCGCC | 1 cut(s) | 1689 |
| ErhI | CCWWGG | 6 cut(s) | 344, 401, 1572, 1605, 1679, 2367 |
| Esp3I | CGTCTC | 2 cut(s) | 216, 831 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 930, 962, 2092, 2124, 2937, 2969 |
| FaqI | GGGAC | 6 cut(s) | 1783, 2125, 2348, 2448, 2949, 2986 |
| FauI | CCCGC | 3 cut(s) | 285, 543, 3159 |
| FauNDI | CATATG | 2 cut(s) | 1714, 2418 |
| FbaI | TGATCA | 1 cut(s) | 2061 |
| FblI | GTMKAC | 2 cut(s) | 1397, 2269 |
| FriOI | GRGCYC | 3 cut(s) | 1868, 1882, 3678 |
| FspBI | CTAG | 8 cut(s) | 1097, 1131, 1670, 2664, 3104, 3108, 3123, 3714 |
| FspI | TGCGCA | 2 cut(s) | 2513, 3197 |
| GlaI | GCGC | 7 cut(s) | 196, 229, 618, 1689, 2513, 2848, 3197 |
| GsuI | CTGGAG | 1 cut(s) | 1896 |
| HaeII | RGCGCY | 3 cut(s) | 198, 1691, 2850 |
| HgaI | GACGC | 1 cut(s) | 813 |
| HhaI | GCGC | 7 cut(s) | 197, 230, 619, 1690, 2514, 2849, 3198 |
| Hin1I | GRCGYC | 2 cut(s) | 824, 1688 |
| Hin6I | GCGC | 7 cut(s) | 195, 228, 617, 1688, 2512, 2847, 3196 |
| HinP1I | GCGC | 7 cut(s) | 195, 228, 617, 1688, 2512, 2847, 3196 |
| HincII | GTYRAC | 3 cut(s) | 393, 3148, 3664 |
| HindII | GTYRAC | 3 cut(s) | 393, 3148, 3664 |
| HindIII | AAGCTT | 2 cut(s) | 249, 2192 |
| HphI | GGTGA | 7 cut(s) | 283, 442, 668, 1811, 2896, 3080, 3086 |
| Hpy99I | CGWCG | 2 cut(s) | 58, 68 |
| HpyCH4III | ACNGT | 8 cut(s) | 44, 423, 514, 571, 1417, 2518, 2715, 3494 |
| HpyCH4IV | ACGT | 3 cut(s) | 1220, 1785, 2831 |
| HpySE526I | ACGT | 3 cut(s) | 1220, 1785, 2831 |
| Hsp92I | GRCGYC | 2 cut(s) | 824, 1688 |
| HspAI | GCGC | 7 cut(s) | 195, 228, 617, 1688, 2512, 2847, 3196 |
| KasI | GGCGCC | 1 cut(s) | 1687 |
| Kpn2I | TCCGGA | 2 cut(s) | 1030, 2323 |
| KroI | GCCGGC | 4 cut(s) | 157, 200, 304, 3162 |
| KroNI | GCCGGC | 4 cut(s) | 159, 202, 306, 3164 |
| Ksp22I | TGATCA | 1 cut(s) | 2061 |
| LguI | GCTCTTC | 2 cut(s) | 1702, 2310 |
| LmnI | GCTCC | 4 cut(s) | 1877, 2908, 3181, 3358 |
| MaeI | CTAG | 8 cut(s) | 1097, 1131, 1670, 2664, 3104, 3108, 3123, 3714 |
| MaeII | ACGT | 3 cut(s) | 1220, 1785, 2831 |
| MbiI | CCGCTC | 1 cut(s) | 558 |
| MfeI | CAATTG | 3 cut(s) | 468, 2459, 3426 |
| MflI | RGATCY | 2 cut(s) | 23, 790 |
| MhlI | GDGCHC | 4 cut(s) | 648, 1868, 1882, 3678 |
| MlsI | TGGCCA | 1 cut(s) | 1610 |
| MluNI | TGGCCA | 1 cut(s) | 1610 |
| Mly113I | GGCGCC | 1 cut(s) | 1688 |
| MlyI | GAGTC | 4 cut(s) | 1030, 1742, 3387, 3665 |
| MmeI | TCCRAC | 2 cut(s) | 87, 736 |
| Mox20I | TGGCCA | 1 cut(s) | 1610 |
| MreI | CGCCGGCG | 1 cut(s) | 200 |
| MroI | TCCGGA | 2 cut(s) | 1030, 2323 |
| MroNI | GCCGGC | 4 cut(s) | 157, 200, 304, 3162 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1260, 3258 |
| MscI | TGGCCA | 1 cut(s) | 1610 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1232, 2262, 2417, 3038, 3058 |
| Msp20I | TGGCCA | 1 cut(s) | 1610 |
| MspA1I | CMGCKG | 2 cut(s) | 550, 639 |
| MspCI | CTTAAG | 1 cut(s) | 2753 |
| MspR9I | CCNGG | 9 cut(s) | 183, 894, 1466, 1721, 1875, 2262, 2969, 2970, 3177 |
| MunI | CAATTG | 3 cut(s) | 468, 2459, 3426 |
| Mva1269I | GAATGC | 2 cut(s) | 194, 1260 |
| MvaI | CCWGG | 6 cut(s) | 894, 1466, 1721, 1875, 2262, 3177 |
| MvnI | CGCG | 2 cut(s) | 230, 543 |
| NaeI | GCCGGC | 4 cut(s) | 159, 202, 306, 3164 |
| NarI | GGCGCC | 1 cut(s) | 1688 |
| NciI | CCSGG | 3 cut(s) | 183, 2969, 2970 |
| NcoI | CCATGG | 1 cut(s) | 344 |
| NdeI | CATATG | 2 cut(s) | 1714, 2418 |
| NgoMIV | GCCGGC | 4 cut(s) | 157, 200, 304, 3162 |
| NlaIV | GGNNCC | 7 cut(s) | 686, 1677, 1689, 1865, 1866, 1879, 2965 |
| NmeAIII | GCCGAG | 1 cut(s) | 1588 |
| NmuCI | GTSAC | 6 cut(s) | 271, 417, 1799, 2748, 2764, 3458 |
| NsbI | TGCGCA | 2 cut(s) | 2513, 3197 |
| NspI | RCATGY | 5 cut(s) | 623, 1231, 1391, 3157, 3439 |
| NspV | TTCGAA | 2 cut(s) | 140, 3313 |
| PagI | TCATGA | 2 cut(s) | 2121, 3625 |
| PasI | CCCWGGG | 1 cut(s) | 893 |
| PceI | AGGCCT | 1 cut(s) | 3286 |
| PciSI | GCTCTTC | 2 cut(s) | 1702, 2310 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 137 |
| PctI | GAATGC | 2 cut(s) | 194, 1260 |
| PdiI | GCCGGC | 4 cut(s) | 159, 202, 306, 3164 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1260, 3258 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1874 |
| PfoI | TCCNGGA | 1 cut(s) | 181 |
| PleI | GAGTC | 4 cut(s) | 1029, 1742, 3386, 3664 |
| PluTI | GGCGCC | 1 cut(s) | 1691 |
| PpsI | GAGTC | 4 cut(s) | 1029, 1742, 3386, 3664 |
| Ppu21I | YACGTR | 1 cut(s) | 1786 |
| PsiI | TTATAA | 1 cut(s) | 1137 |
| Psp124BI | GAGCTC | 1 cut(s) | 3678 |
| Psp6I | CCWGG | 6 cut(s) | 892, 1464, 1719, 1873, 2260, 3175 |
| PspEI | GGTNACC | 1 cut(s) | 271 |
| PspGI | CCWGG | 6 cut(s) | 892, 1464, 1719, 1873, 2260, 3175 |
| PspN4I | GGNNCC | 7 cut(s) | 686, 1677, 1689, 1865, 1866, 1879, 2965 |
| PspOMI | GGGCCC | 1 cut(s) | 1864 |
| PspPI | GGNCC | 9 cut(s) | 1100, 1442, 1706, 1864, 1865, 2572, 2963, 3160, 3727 |
| PstI | CTGCAG | 1 cut(s) | 1450 |
| PstNI | CAGNNNCTG | 6 cut(s) | 370, 899, 1454, 1664, 1874, 3014 |
| PsuI | RGATCY | 2 cut(s) | 23, 790 |
| PvuII | CAGCTG | 1 cut(s) | 639 |
| RsaI | GTAC | 7 cut(s) | 906, 934, 1319, 1872, 2085, 2696, 3267 |
| RsaNI | GTAC | 7 cut(s) | 905, 933, 1318, 1871, 2084, 2695, 3266 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1232, 2262, 2417, 3038, 3058 |
| SacI | GAGCTC | 1 cut(s) | 3678 |
| SapI | GCTCTTC | 2 cut(s) | 1702, 2310 |
| Sau96I | GGNCC | 9 cut(s) | 1100, 1442, 1706, 1864, 1865, 2572, 2963, 3160, 3727 |
| SbfI | CCTGCAGG | 1 cut(s) | 1450 |
| SchI | GAGTC | 4 cut(s) | 1030, 1742, 3387, 3665 |
| ScrFI | CCNGG | 9 cut(s) | 183, 894, 1466, 1721, 1875, 2262, 2969, 2970, 3177 |
| SdaI | CCTGCAGG | 1 cut(s) | 1450 |
| SduI | GDGCHC | 4 cut(s) | 648, 1868, 1882, 3678 |
| SfcI | CTRYAG | 4 cut(s) | 1401, 1446, 3006, 3543 |
| SfoI | GGCGCC | 1 cut(s) | 1689 |
| SfuI | TTCGAA | 2 cut(s) | 140, 3313 |
| SgrAI | CRCCGGYG | 1 cut(s) | 200 |
| SinI | GGWCC | 4 cut(s) | 1442, 1706, 2572, 2963 |
| SmaI | CCCGGG | 1 cut(s) | 2970 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1232, 2262, 2417, 3038, 3058 |
| SmlI | CTYRAG | 1 cut(s) | 2753 |
| SmoI | CTYRAG | 1 cut(s) | 2753 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1450 |
| SseBI | AGGCCT | 1 cut(s) | 3286 |
| SspDI | GGCGCC | 1 cut(s) | 1687 |
| SspI | AATATT | 2 cut(s) | 1431, 1496 |
| SspMI | CTAG | 8 cut(s) | 1097, 1131, 1670, 2664, 3104, 3108, 3123, 3714 |
| SstI | GAGCTC | 1 cut(s) | 3678 |
| StuI | AGGCCT | 1 cut(s) | 3286 |
| StyD4I | CCNGG | 9 cut(s) | 181, 892, 1464, 1719, 1873, 2260, 2967, 2968, 3175 |
| StyI | CCWWGG | 6 cut(s) | 344, 401, 1572, 1605, 1679, 2367 |
| TaaI | ACNGT | 8 cut(s) | 44, 423, 514, 571, 1417, 2518, 2715, 3494 |
| TaiI | ACGT | 3 cut(s) | 1223, 1788, 2834 |
| TaqI | TCGA | 9 cut(s) | 140, 387, 476, 925, 957, 1426, 3044, 3313, 3420 |
| TatI | WGTACW | 1 cut(s) | 2083 |
| TauI | GCSGC | 8 cut(s) | 94, 170, 173, 176, 200, 283, 869, 3542 |
| TscAI | CASTG | 5 cut(s) | 606, 1420, 2521, 3586, 3649 |
| TseFI | GTSAC | 6 cut(s) | 271, 417, 1799, 2748, 2764, 3458 |
| Tsp45I | GTSAC | 6 cut(s) | 271, 417, 1799, 2748, 2764, 3458 |
| TspGWI | ACGGA | 4 cut(s) | 146, 1754, 2712, 2783 |
| TspMI | CCCGGG | 1 cut(s) | 2968 |
| TspRI | CASTG | 5 cut(s) | 606, 1420, 2521, 3586, 3649 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1874 |
| Vha464I | CTTAAG | 1 cut(s) | 2753 |
| VpaK11BI | GGWCC | 4 cut(s) | 1442, 1706, 2572, 2963 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2943 |
| XapI | RAATTY | 8 cut(s) | 136, 373, 1073, 2152, 2497, 2777, 3212, 3340 |
| XbaI | TCTAGA | 1 cut(s) | 3713 |
| XceI | RCATGY | 5 cut(s) | 623, 1231, 1391, 3157, 3439 |
| XmaI | CCCGGG | 1 cut(s) | 2968 |
| XmiI | GTMKAC | 2 cut(s) | 1397, 2269 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1260, 3258 |
| XspI | CTAG | 8 cut(s) | 1097, 1131, 1670, 2664, 3104, 3108, 3123, 3714 |