Rh7AG110200

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0004286
Physical Location & Seq
Forward (+)
8661405 .. 8671263
9859 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG110200.1

Sequence Viewer

Length: 3741 bp
ATGGTTTCAACGAGGAGAAGTGGATCTCTCTCCGGCAATAACAGTAAAAGATCGTCGTCTTCCGACGACAACAAGCCTCAGTCGCCGAAGCGGCAGAAGGTGGATAACAATGGCGTTGGTTCGGAGAAAACGGAGAATTCGAAGGAGGTTTGTACGCCGGCCACGGCGGCGGCTGATCCCGGAGAATGCAGCGCCGCCGGCGAGGCTCAGACGGCCGGAGACGGCGCGACTTCTGTAAAGACTGAAGCTTCTGCACAAGCGGTGGCGGTGACCCCGCCGCCTGTGGCTGAAGGTGCTGAAGGGTCTTCGCCGGCAGCTGTGCTGGATAAGGCGAGGACTTCCTTTTTGGCATGGAGTTCCTATCAGAAGCAGAGCCTGAATTCGGGGAGTTTCGAGTTGACAACACCTTGGTGCAAGCTTCTGTCACAGTCTGGACAGAATCAAAACATTGCTATCACCACATCGATTTTTACAATTGGTTCGAGTAGAAGCAGCAATTTCCCTCTGAAGGATAGTACCGTTAGTGCGTGTCTGTGCAAGATCAAACGCGAACAGCGGGAGAGCGGTGCTGTAACGATTATAGAAAGTATGGGAAACAAGGGATCACTGCAAGTAAATGGGGCGCATGTGAAGAAAGGCAACAGCTGCGTGCTCAACTCGGGTGATGAAGTGGTATTTGGTTCTCTGGGGAACCATGCTTATATTTTTCAACTACTTGTGGCGGAGGGTGCAGTCAAGGGTGCAGAGGTTCAAAGTGGTGTTGGAAAATATCTGCACCTTGACAGGAGAGCCGGAGATCCTTCAGATGTGGATGGGGCTTCCATACTGGCTTCTCTTAGCATGAGACCAGAACTATCACGATGGAAGTCTGCGGCTCAGACCACCAATAAAGTCCACCCAGGGGCTGAAGTACCAGCTCAGTCTGTTATTCGAGAAGGTACAGAAGTTGAGCTTGAAGAACTCCAAGGCAGCTTGACCCCAAACAGAACAACTGACAAAACAGAAGAGATCGGAGGAATCAACAAGAGTCTTACTCCGGACTGCAACCCAGATTCGGGTGTAGAGGCAGACAATGTAAAATTCTCTGGGATGAATGATTTGCTAGGGCCTTTATTGAGGATGTTAGCACGAACACCTAGTTATAAACTGAAATTGAGCAAAGGTATCTGTAAACAGGTATTGGAAGAAAAAAATGAGTGGACGAGGGATTCGCTGCCAGCATCAACGTCAGGCATGTCTGTGCGGTGTGCTGTTTTTAAAGAAGGCATTCATGCAGCAATTCTTGAAGGCAATAGCATGGATGTTTCATTTGATGATTTCCCGTACTATTTGAGTGAGAATACGAAGAATGTGCTGATTGCAGCTTCATTTATACACTTGAAACATAAAGAACATGCAAAGTATACTACAGAGCTTACCACTGTGAATCCTCGAATATTGCTCTCTGGTCCTGCAGGGTCTGAGATATACCAGGAGATGTTGGCAAAGGCACTTGCTCAATATTTCGGGGCTAAGTTGCTCATATTTGATAGCCAATCACTTTTGGGTGGTTTGTCATCAAAGGAAGCCGAGCTGCCCAAGGATGGGTCTAATGGAGATAAAATAAGCACCTTGGCCAAACCAAGTCCTGTTTCCACAGACTTGTCTAAGAGCATTGATCCATCAGTTTCTGAGCTAGAGGCACCAAGGTTGGCGCCAAGCTCTTCATATGGCCTGGAATCCCAACCTAAGACGGAGATTGACTCCATCGCTACATCCTCAGGGACATCTAAGAATTACGTGTTTAAAATAGGTGACAGAGTAAAGTTTATTGGTTTATCTTCGGGCAACTTATATCCTACAACATCTTCTTCACGGGGCCCAGTACCTGGAGCCCGAGGAGAGATTGCGTTGGTTTTTGAGGACAATCCTTTGTCAAAAATTGGTGTGAGGTTTGATAAACAAGTATTTGATGGTGTTGATCTTGGGGGTCTTTGTAAAGGAAATGGATTCTTCTGCAATGCCTCCGATCTTCGTTCAGAAAACACAGGTGCGGATGATCTGGATAAATTACTGATCAATACATTGTTTGAGGCTGTACATAGTGAGAGCAGAGGTTCTCCTTTCATTTTGTTCATGAAAGATGCGGAGAAGTCCCTTGTAGGAAATTCAGATTCATATTCCACATTCAGGGGCAGACTTGATAAGCTTCCTGATAATGTGGTTGTAATTGGCTCTCATACTCATACCGACAATCGCAAGGAGAAGTCGCATCCTGGTGGTCTACTTTTCACAAAGTTCGGTAGCAATCAAACTGCTCTTCTTGATTTGGCTTTTCCGGATAGTTTTGGAAGACTGCATGAAAGAGGGAAGGAAGTCCCCAAGGCAACAAAACTTCTGACGAAACTTTTTCCTAATAAAGTAACCATTCATATGCCACAGGATGAGGGACTTCTTGTCTCATGGAAACAGCAATTGGATCGTGATGCCGAAACCCTCAAAATGAAGGGAAATTTGAACCACTTGCGCACTGTTCTGGGTCGGTGTGGGATGGAATGTGAAGGACTTGATACGCTAAGCATCAAGGACCAAACACTTACAAATGAAAGTTCAGAGAAGGTAGTAGGATGGGCATTAAGCCATCATTTAATGGAGAATCCTGAAGCTGATCCAGAAACTAGAGTTGTTTTGTCTGCTGAGAGCATCAAGTACGGACTTGGAATCTTACAGTCTATCCAGAATGAAAATAAGAGCTTGAAGAAGTCACTTAAGGATGTTGTCACGGAAAATGAATTTGAGAAAAGGCTTTTGGCTGATGTTATCCCACCTACTGACATTGGAGTTACGTTTGATGATATTGGCGCTCTTGAAAATGTCAAGGATACATTGAAAGAATTGGTGATGCTGCCTTTACAAAGGCCGGAGCTTTTCTGCAAAGGGCAATTAACCAAGCCCTGCAAAGGCATCCTTTTATTTGGTCCCCCGGGGACAGGCAAGACAATGCTGGCAAAGGCTGTGGCTACAGAAGCTGGTGCAAACTTCATCAACATATCCATGTCGAGCATCACATCTAAGTGGTTTGGTGAGGGTGAGAAGTATGTGAAAGCTGTTTTCTCTCTAGCTAGTAAAATAGCCCCTAGTGTCGTATTTGTTGATGAAGTTGACAGCATGTTGGGCCGGCGGGAAAATCCAGGGGAGCATGAGGCAATGCGCAAGATGAAAAATGAATTTATGGTAAATTGGGATGGGCTACGAACAAAAGAAGCTGAACGAGTTCTGGTACTTGCAGCCACAAATAGGCCTTTTGACCTTGATGAAGCTGTCATTCGAAGGCTGCCCCGAAGGTTGATGGTAAATTTGCCAGATGCTCCCAATAGGGCAAAGATATTAAGAGTCATATTGGCAAAAGAGGACTTATCTCCCGATGTTGATTTCGAGACAATTGCGAGCATGTCAGATGGATATTCTGGAAGTGACCTTAAAAATCTATGCGTGGCTGCTGCACACCGTCCAATTAAAGAGATTTTGGAAAAGGAAAAGAAGGATCGTGCTGCAGCTATAGCAGAAGGTAAACCTATTCCAGCATTGAGTAGCAGTGGCGATGTTCGGCCTGTGAACATGGATGATTTTAAATATGCTCATGAACAGGTATGTGCCAGTGTATCATCGGAGTCTGTCAACATGACAGAGCTCTTACAATGGAATGAACTATATGGAGAAGGGGGTTCTAGAAGAAAGAAGGCCCTTAGTTACTTCATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA FHA

Protein Analysis

1246

Amino Acids

134.72

Weight (kDa)

6.16

Isoelectric Point (pI)

38.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FHA PF00498 158 - 227 3.4e-06 FHA domain
DUF7751 PF24933 844 - 903 1.4e-18 Domain of unknown function (DUF7751)
AAA PF00004 982 - 1112 1.4e-37 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 1135 - 1171 5.5e-12 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1143
Acc16I TGCGCA 2 cut(s) 2507, 3191
AccB1I GGYRCC 2 cut(s) 1681, 1693
AccB7I CCANNNNNTGG 1 cut(s) 1868
AccBSI CCGCTC 1 cut(s) 564
AccI GTMKAC 2 cut(s) 1403, 2263
AccII CGCG 2 cut(s) 227, 549
AccIII TCCGGA 2 cut(s) 1036, 2317
AclWI GGATC 8 cut(s) 31, 170, 610, 791, 1652, 2466, 2642, 3531
AcoI YGGCCR 3 cut(s) 159, 213, 1614
AcsI RAATTY 8 cut(s) 136, 379, 1079, 2146, 2491, 2771, 3206, 3334
AcuI CTGAAG 7 cut(s) 264, 309, 318, 527, 786, 927, 2661
AcyI GRCGYC 1 cut(s) 1694
AfaI GTAC 9 cut(s) 154, 517, 912, 940, 1325, 1866, 2079, 2690, 3261
AflII CTTAAG 1 cut(s) 2747
AflIII ACRYGT 1 cut(s) 1779
AhdI GACNNNNNGTC 1 cut(s) 2435
AjnI CCWGG 6 cut(s) 898, 1470, 1713, 1867, 2254, 3169
AjuI GAANNNNNNNTTGG 8 cut(s) 660, 692, 1615, 1647, 2438, 2470, 2771, 2803
AleI CACNNNNGTG 1 cut(s) 409
Alw21I GWGCWC 2 cut(s) 654, 3672
Alw26I GTCTC 4 cut(s) 213, 838, 2443, 3410
AlwI GGATC 8 cut(s) 31, 170, 610, 791, 1652, 2466, 2642, 3531
AlwNI CAGNNNCTG 6 cut(s) 376, 905, 1460, 1670, 1868, 3008
Ama87I CYCGRG 3 cut(s) 658, 1875, 2962
Aor13HI TCCGGA 2 cut(s) 1036, 2317
ApaI GGGCCC 1 cut(s) 1862
ApoI RAATTY 8 cut(s) 136, 379, 1079, 2146, 2491, 2771, 3206, 3334
ArsI GACNNNNNNTTYG 4 cut(s) 328, 360, 1192, 1224
Asp700I GAANNNNTTC 2 cut(s) 1266, 3252
AspLEI GCGC 7 cut(s) 194, 227, 625, 1696, 2508, 2843, 3192
AspS9I GGNCC 8 cut(s) 1106, 1448, 1858, 1859, 2566, 2957, 3154, 3721
AsuC2I CCSGG 3 cut(s) 180, 2963, 2964
AsuHPI GGTGA 7 cut(s) 280, 448, 674, 1805, 2890, 3074, 3080
AsuII TTCGAA 2 cut(s) 140, 3307
AvaI CYCGRG 3 cut(s) 658, 1875, 2962
AvaII GGWCC 3 cut(s) 1448, 2566, 2957
AxyI CCTNAGG 1 cut(s) 1759
BaeGI GKGCMC 1 cut(s) 1862
BaeI ACNNNNGTAYC 2 cut(s) 930, 963
BalI TGGCCA 1 cut(s) 1616
BanI GGYRCC 2 cut(s) 1681, 1693
BanII GRGCYC 3 cut(s) 1862, 1876, 3672
BbsI GAAGAC 3 cut(s) 51, 297, 2338
Bbv12I GWGCWC 2 cut(s) 654, 3672
BceAI ACGGC 3 cut(s) 180, 228, 238
BcgI CGANNNNNNTGC 6 cut(s) 1333, 1367, 2441, 2475, 3404, 3438
BciT130I CCWGG 6 cut(s) 900, 1472, 1715, 1869, 2256, 3171
BciVI GTATCC 1 cut(s) 2854
BclI TGATCA 1 cut(s) 2055
BcnI CCSGG 3 cut(s) 180, 2963, 2964
BcoDI GTCTC 4 cut(s) 213, 838, 2443, 3410
BfaI CTAG 8 cut(s) 1103, 1137, 1676, 2658, 3098, 3102, 3117, 3708
BfmI CTRYAG 5 cut(s) 1407, 1452, 3000, 3531, 3537
BfoI RGCGCY 3 cut(s) 195, 1697, 2844
BfrI CTTAAG 1 cut(s) 2747
BfuI GTATCC 1 cut(s) 2854
BglI GCCNNNNNGGC 3 cut(s) 91, 167, 203
BlpI GCTNAGC 1 cut(s) 2555
Bme1390I CCNGG 9 cut(s) 180, 900, 1472, 1715, 1869, 2256, 2963, 2964, 3171
Bme18I GGWCC 3 cut(s) 1448, 2566, 2957
BmeRI GACNNNNNGTC 1 cut(s) 2435
BmeT110I CYCGRG 3 cut(s) 658, 1875, 2962
BmgT120I GGNCC 8 cut(s) 1106, 1448, 1858, 1859, 2566, 2957, 3154, 3721
BmiI GGNNCC 7 cut(s) 692, 1683, 1695, 1859, 1860, 1873, 2959
BmrFI CCNGG 9 cut(s) 180, 900, 1472, 1715, 1869, 2256, 2963, 2964, 3171
BmrI ACTGGG 1 cut(s) 1856
BmuI ACTGGG 1 cut(s) 1856
BpiI GAAGAC 3 cut(s) 51, 297, 2338
BplI GAGNNNNNCTC 4 cut(s) 1018, 1050, 1727, 1759
BpmI CTGGAG 1 cut(s) 1890
Bpu1102I GCTNAGC 1 cut(s) 2555
Bpu14I TTCGAA 2 cut(s) 140, 3307
BpuMI CCSGG 3 cut(s) 180, 2963, 2964
Bsa29I ATCGAT 1 cut(s) 464
BsaAI YACGTR 1 cut(s) 1780
BsaHI GRCGYC 1 cut(s) 1694
BsaI GGTCTC 1 cut(s) 838
BsaWI WCCGGW 2 cut(s) 1036, 2317
Bse118I RCCGGY 4 cut(s) 157, 197, 310, 3156
Bse1I ACTGG 3 cut(s) 831, 1862, 3636
Bse21I CCTNAGG 1 cut(s) 1759
Bse3DI GCAATG 3 cut(s) 447, 2005, 3192
BseAI TCCGGA 2 cut(s) 1036, 2317
BseBI CCWGG 6 cut(s) 900, 1472, 1715, 1869, 2256, 3171
BseCI ATCGAT 1 cut(s) 464
BseMI GCAATG 3 cut(s) 447, 2005, 3192
BseMII CTCAG 8 cut(s) 92, 221, 890, 932, 1452, 1662, 1773, 2667
BseNI ACTGG 3 cut(s) 831, 1862, 3636
BseRI GAGGAG 2 cut(s) 28, 1893
BseSI GKGCMC 1 cut(s) 1862
BseX3I CGGCCG 1 cut(s) 213
BsgI GTGCAG 5 cut(s) 237, 750, 758, 762, 3465
Bsh1236I CGCG 2 cut(s) 227, 549
Bsh1285I CGRYCG 1 cut(s) 216
BshNI GGYRCC 2 cut(s) 1681, 1693
BshVI ATCGAT 1 cut(s) 464
BsiEI CGRYCG 1 cut(s) 216
BsiHKAI GWGCWC 2 cut(s) 654, 3672
BsiHKCI CYCGRG 3 cut(s) 658, 1875, 2962
BslFI GGGAC 6 cut(s) 1777, 2119, 2342, 2442, 2943, 2980
BsmAI GTCTC 4 cut(s) 213, 838, 2443, 3410
BsmBI CGTCTC 1 cut(s) 213
BsmFI GGGAC 6 cut(s) 1777, 2119, 2342, 2442, 2943, 2980
BsmI GAATGC 2 cut(s) 191, 1266
Bso31I GGTCTC 1 cut(s) 838
BsoBI CYCGRG 3 cut(s) 658, 1875, 2962
Bsp119I TTCGAA 2 cut(s) 140, 3307
Bsp120I GGGCCC 1 cut(s) 1858
Bsp1286I GDGCHC 4 cut(s) 654, 1862, 1876, 3672
Bsp13I TCCGGA 2 cut(s) 1036, 2317
Bsp1407I TGTACA 1 cut(s) 2077
Bsp1720I GCTNAGC 1 cut(s) 2555
BspCNI CTCAG 8 cut(s) 91, 220, 889, 931, 1453, 1663, 1772, 2668
BspDI ATCGAT 1 cut(s) 464
BspEI TCCGGA 2 cut(s) 1036, 2317
BspFNI CGCG 2 cut(s) 227, 549
BspHI TCATGA 2 cut(s) 2115, 3619
BspLI GGNNCC 7 cut(s) 692, 1683, 1695, 1859, 1860, 1873, 2959
BspMAI CTGCAG 2 cut(s) 1456, 3535
BspPI GGATC 8 cut(s) 31, 170, 610, 791, 1652, 2466, 2642, 3531
BspQI GCTCTTC 2 cut(s) 1708, 2304
BspT104I TTCGAA 2 cut(s) 140, 3307
BspT107I GGYRCC 2 cut(s) 1681, 1693
BspTI CTTAAG 1 cut(s) 2747
BspTNI GGTCTC 1 cut(s) 838
BsrBI CCGCTC 1 cut(s) 564
BsrDI GCAATG 3 cut(s) 447, 2005, 3192
BsrFI RCCGGY 4 cut(s) 157, 197, 310, 3156
BsrGI TGTACA 1 cut(s) 2077
BsrI ACTGG 3 cut(s) 831, 1862, 3636
BssAI RCCGGY 4 cut(s) 157, 197, 310, 3156
BssNAI GTATAC 1 cut(s) 1404
BssNI GRCGYC 1 cut(s) 1694
BssT1I CCWWGG 6 cut(s) 407, 964, 1578, 1611, 1685, 2361
Bst1107I GTATAC 1 cut(s) 1404
Bst2UI CCWGG 6 cut(s) 900, 1472, 1715, 1869, 2256, 3171
Bst4CI ACNGT 7 cut(s) 44, 429, 520, 1423, 2512, 2709, 3488
Bst6I CTCTTC 3 cut(s) 999, 1708, 2304
BstACI GRCGYC 1 cut(s) 1694
BstAFI CTTAAG 1 cut(s) 2747
BstAPI GCANNNNNTGC 1 cut(s) 645
BstAUI TGTACA 1 cut(s) 2077
BstBAI YACGTR 1 cut(s) 1780
BstBI TTCGAA 2 cut(s) 140, 3307
BstC8I GCNNGC 9 cut(s) 159, 199, 312, 416, 650, 1218, 2985, 3158, 3427
BstDSI CCRYGG 1 cut(s) 162
BstEII GGTNACC 1 cut(s) 268
BstFNI CGCG 2 cut(s) 227, 549
BstH2I RGCGCY 3 cut(s) 195, 1697, 2844
BstHHI GCGC 7 cut(s) 194, 227, 625, 1696, 2508, 2843, 3192
BstMAI GTCTC 4 cut(s) 213, 838, 2443, 3410
BstMCI CGRYCG 1 cut(s) 216
BstNI CCWGG 6 cut(s) 900, 1472, 1715, 1869, 2256, 3171
BstNSI RCATGY 5 cut(s) 629, 1237, 1397, 3151, 3433
BstPI GGTNACC 1 cut(s) 268
BstSCI CCNGG 9 cut(s) 178, 898, 1470, 1713, 1867, 2254, 2961, 2962, 3169
BstSFI CTRYAG 5 cut(s) 1407, 1452, 3000, 3531, 3537
BstSLI GKGCMC 1 cut(s) 1862
BstUI CGCG 2 cut(s) 227, 549
BstV2I GAAGAC 3 cut(s) 51, 297, 2338
BstX2I RGATCY 2 cut(s) 23, 796
BstYI RGATCY 2 cut(s) 23, 796
BstZ17I GTATAC 1 cut(s) 1404
BstZI CGGCCG 1 cut(s) 213
Bsu15I ATCGAT 1 cut(s) 464
Bsu36I CCTNAGG 1 cut(s) 1759
BsuI GTATCC 1 cut(s) 2854
BsuTUI ATCGAT 1 cut(s) 464
BtgI CCRYGG 1 cut(s) 162
BtgZI GCGATG 2 cut(s) 1732, 3594
BtsI GCAGTG 2 cut(s) 605, 3580
BtsIMutI CAGTG 5 cut(s) 605, 1419, 2508, 3580, 3643
Cac8I GCNNGC 9 cut(s) 159, 199, 312, 416, 650, 1218, 2985, 3158, 3427
CaiI CAGNNNCTG 6 cut(s) 376, 905, 1460, 1670, 1868, 3008
CciI TCATGA 2 cut(s) 2115, 3619
CfoI GCGC 7 cut(s) 194, 227, 625, 1696, 2508, 2843, 3192
Cfr10I RCCGGY 4 cut(s) 157, 197, 310, 3156
Cfr13I GGNCC 8 cut(s) 1106, 1448, 1858, 1859, 2566, 2957, 3154, 3721
Cfr9I CCCGGG 1 cut(s) 2962
ClaI ATCGAT 1 cut(s) 464
Csp6I GTAC 9 cut(s) 153, 516, 911, 939, 1324, 1865, 2078, 2689, 3260
CspCI CAANNNNNGTGG 2 cut(s) 2976, 3011
CviQI GTAC 9 cut(s) 153, 516, 911, 939, 1324, 1865, 2078, 2689, 3260
DinI GGCGCC 1 cut(s) 1695
DraI TTTAAA 3 cut(s) 1258, 1786, 3610
DriI GACNNNNNGTC 1 cut(s) 2435
EaeI YGGCCR 3 cut(s) 159, 213, 1614
EagI CGGCCG 1 cut(s) 213
Eam1104I CTCTTC 3 cut(s) 999, 1708, 2304
Eam1105I GACNNNNNGTC 1 cut(s) 2435
EarI CTCTTC 3 cut(s) 999, 1708, 2304
EciI GGCGGA 1 cut(s) 737
Ecl136II GAGCTC 1 cut(s) 3670
EclXI CGGCCG 1 cut(s) 213
Eco130I CCWWGG 6 cut(s) 407, 964, 1578, 1611, 1685, 2361
Eco147I AGGCCT 1 cut(s) 3280
Eco24I GRGCYC 3 cut(s) 1862, 1876, 3672
Eco31I GGTCTC 1 cut(s) 838
Eco47I GGWCC 3 cut(s) 1448, 2566, 2957
Eco52I CGGCCG 1 cut(s) 213
Eco53kI GAGCTC 1 cut(s) 3670
Eco57I CTGAAG 7 cut(s) 264, 309, 318, 527, 786, 927, 2661
Eco81I CCTNAGG 1 cut(s) 1759
Eco88I CYCGRG 3 cut(s) 658, 1875, 2962
Eco91I GGTNACC 1 cut(s) 268
EcoICRI GAGCTC 1 cut(s) 3670
EcoO109I RGGNCCY 3 cut(s) 1106, 1858, 3721
EcoO65I GGTNACC 1 cut(s) 268
EcoRI GAATTC 2 cut(s) 136, 379
EcoRII CCWGG 6 cut(s) 898, 1470, 1713, 1867, 2254, 3169
EcoT14I CCWWGG 6 cut(s) 407, 964, 1578, 1611, 1685, 2361
EcoT38I GRGCYC 3 cut(s) 1862, 1876, 3672
EgeI GGCGCC 1 cut(s) 1695
EheI GGCGCC 1 cut(s) 1695
ErhI CCWWGG 6 cut(s) 407, 964, 1578, 1611, 1685, 2361
Esp3I CGTCTC 1 cut(s) 213
FalI AAGNNNNNCTT 4 cut(s) 936, 968, 2931, 2963
FaqI GGGAC 6 cut(s) 1777, 2119, 2342, 2442, 2943, 2980
FauI CCCGC 3 cut(s) 282, 549, 3153
FauNDI CATATG 2 cut(s) 1708, 2412
FbaI TGATCA 1 cut(s) 2055
FblI GTMKAC 2 cut(s) 1403, 2263
FriOI GRGCYC 3 cut(s) 1862, 1876, 3672
FspBI CTAG 8 cut(s) 1103, 1137, 1676, 2658, 3098, 3102, 3117, 3708
FspI TGCGCA 2 cut(s) 2507, 3191
GlaI GCGC 7 cut(s) 193, 226, 624, 1695, 2507, 2842, 3191
GsuI CTGGAG 1 cut(s) 1890
HaeII RGCGCY 3 cut(s) 195, 1697, 2844
HhaI GCGC 7 cut(s) 194, 227, 625, 1696, 2508, 2843, 3192
Hin1I GRCGYC 1 cut(s) 1694
Hin6I GCGC 7 cut(s) 192, 225, 623, 1694, 2506, 2841, 3190
HinP1I GCGC 7 cut(s) 192, 225, 623, 1694, 2506, 2841, 3190
HincII GTYRAC 3 cut(s) 399, 3142, 3658
HindII GTYRAC 3 cut(s) 399, 3142, 3658
HindIII AAGCTT 3 cut(s) 246, 416, 2186
HphI GGTGA 7 cut(s) 280, 448, 674, 1805, 2890, 3074, 3080
Hpy99I CGWCG 2 cut(s) 58, 68
HpyCH4III ACNGT 7 cut(s) 44, 429, 520, 1423, 2512, 2709, 3488
HpyCH4IV ACGT 3 cut(s) 1226, 1779, 2825
HpySE526I ACGT 3 cut(s) 1226, 1779, 2825
Hsp92I GRCGYC 1 cut(s) 1694
HspAI GCGC 7 cut(s) 192, 225, 623, 1694, 2506, 2841, 3190
KasI GGCGCC 1 cut(s) 1693
Kpn2I TCCGGA 2 cut(s) 1036, 2317
KroI GCCGGC 4 cut(s) 157, 197, 310, 3156
KroNI GCCGGC 4 cut(s) 159, 199, 312, 3158
Ksp22I TGATCA 1 cut(s) 2055
LguI GCTCTTC 2 cut(s) 1708, 2304
LmnI GCTCC 4 cut(s) 1871, 2902, 3175, 3352
MaeI CTAG 8 cut(s) 1103, 1137, 1676, 2658, 3098, 3102, 3117, 3708
MaeII ACGT 3 cut(s) 1226, 1779, 2825
MbiI CCGCTC 1 cut(s) 564
MfeI CAATTG 3 cut(s) 474, 2453, 3420
MflI RGATCY 2 cut(s) 23, 796
MhlI GDGCHC 4 cut(s) 654, 1862, 1876, 3672
MlsI TGGCCA 1 cut(s) 1616
MluNI TGGCCA 1 cut(s) 1616
Mly113I GGCGCC 1 cut(s) 1694
MlyI GAGTC 4 cut(s) 1036, 1736, 3381, 3659
MmeI TCCRAC 2 cut(s) 87, 742
Mox20I TGGCCA 1 cut(s) 1616
MreI CGCCGGCG 1 cut(s) 197
MroI TCCGGA 2 cut(s) 1036, 2317
MroNI GCCGGC 4 cut(s) 157, 197, 310, 3156
MroXI GAANNNNTTC 2 cut(s) 1266, 3252
MscI TGGCCA 1 cut(s) 1616
MslI CAYNNNNRTG 6 cut(s) 409, 1238, 2256, 2411, 3032, 3052
Msp20I TGGCCA 1 cut(s) 1616
MspA1I CMGCKG 3 cut(s) 317, 556, 645
MspCI CTTAAG 1 cut(s) 2747
MspR9I CCNGG 9 cut(s) 180, 900, 1472, 1715, 1869, 2256, 2963, 2964, 3171
MunI CAATTG 3 cut(s) 474, 2453, 3420
Mva1269I GAATGC 2 cut(s) 191, 1266
MvaI CCWGG 6 cut(s) 900, 1472, 1715, 1869, 2256, 3171
MvnI CGCG 2 cut(s) 227, 549
NaeI GCCGGC 4 cut(s) 159, 199, 312, 3158
NarI GGCGCC 1 cut(s) 1694
NciI CCSGG 3 cut(s) 180, 2963, 2964
NdeI CATATG 2 cut(s) 1708, 2412
NgoMIV GCCGGC 4 cut(s) 157, 197, 310, 3156
NlaIV GGNNCC 7 cut(s) 692, 1683, 1695, 1859, 1860, 1873, 2959
NmeAIII GCCGAG 1 cut(s) 1594
NmuCI GTSAC 6 cut(s) 268, 423, 1793, 2742, 2758, 3452
NsbI TGCGCA 2 cut(s) 2507, 3191
NspI RCATGY 5 cut(s) 629, 1237, 1397, 3151, 3433
NspV TTCGAA 2 cut(s) 140, 3307
OliI CACNNNNGTG 1 cut(s) 409
PagI TCATGA 2 cut(s) 2115, 3619
PasI CCCWGGG 1 cut(s) 899
PceI AGGCCT 1 cut(s) 3280
PciSI GCTCTTC 2 cut(s) 1708, 2304
PcsI WCGNNNNNNNCGW 1 cut(s) 137
PctI GAATGC 2 cut(s) 191, 1266
PdiI GCCGGC 4 cut(s) 159, 199, 312, 3158
PdmI GAANNNNTTC 2 cut(s) 1266, 3252
PflMI CCANNNNNTGG 1 cut(s) 1868
PfoI TCCNGGA 1 cut(s) 178
PleI GAGTC 4 cut(s) 1035, 1736, 3380, 3658
PluTI GGCGCC 1 cut(s) 1697
PpsI GAGTC 4 cut(s) 1035, 1736, 3380, 3658
Ppu21I YACGTR 1 cut(s) 1780
PsiI TTATAA 1 cut(s) 1143
Psp124BI GAGCTC 1 cut(s) 3672
Psp6I CCWGG 6 cut(s) 898, 1470, 1713, 1867, 2254, 3169
PspEI GGTNACC 1 cut(s) 268
PspGI CCWGG 6 cut(s) 898, 1470, 1713, 1867, 2254, 3169
PspN4I GGNNCC 7 cut(s) 692, 1683, 1695, 1859, 1860, 1873, 2959
PspOMI GGGCCC 1 cut(s) 1858
PspPI GGNCC 8 cut(s) 1106, 1448, 1858, 1859, 2566, 2957, 3154, 3721
PstI CTGCAG 2 cut(s) 1456, 3535
PstNI CAGNNNCTG 6 cut(s) 376, 905, 1460, 1670, 1868, 3008
PsuI RGATCY 2 cut(s) 23, 796
PvuII CAGCTG 2 cut(s) 317, 645
RsaI GTAC 9 cut(s) 154, 517, 912, 940, 1325, 1866, 2079, 2690, 3261
RsaNI GTAC 9 cut(s) 153, 516, 911, 939, 1324, 1865, 2078, 2689, 3260
RseI CAYNNNNRTG 6 cut(s) 409, 1238, 2256, 2411, 3032, 3052
SacI GAGCTC 1 cut(s) 3672
SapI GCTCTTC 2 cut(s) 1708, 2304
Sau96I GGNCC 8 cut(s) 1106, 1448, 1858, 1859, 2566, 2957, 3154, 3721
SbfI CCTGCAGG 1 cut(s) 1456
SchI GAGTC 4 cut(s) 1036, 1736, 3381, 3659
ScrFI CCNGG 9 cut(s) 180, 900, 1472, 1715, 1869, 2256, 2963, 2964, 3171
SdaI CCTGCAGG 1 cut(s) 1456
SduI GDGCHC 4 cut(s) 654, 1862, 1876, 3672
SfcI CTRYAG 5 cut(s) 1407, 1452, 3000, 3531, 3537
SfoI GGCGCC 1 cut(s) 1695
SfuI TTCGAA 2 cut(s) 140, 3307
SgrAI CRCCGGYG 1 cut(s) 197
SinI GGWCC 3 cut(s) 1448, 2566, 2957
SmaI CCCGGG 1 cut(s) 2964
SmiMI CAYNNNNRTG 6 cut(s) 409, 1238, 2256, 2411, 3032, 3052
SmlI CTYRAG 1 cut(s) 2747
SmoI CTYRAG 1 cut(s) 2747
Sse8387I CCTGCAGG 1 cut(s) 1456
SseBI AGGCCT 1 cut(s) 3280
SspDI GGCGCC 1 cut(s) 1693
SspI AATATT 2 cut(s) 1437, 1502
SspMI CTAG 8 cut(s) 1103, 1137, 1676, 2658, 3098, 3102, 3117, 3708
SstI GAGCTC 1 cut(s) 3672
StuI AGGCCT 1 cut(s) 3280
StyD4I CCNGG 9 cut(s) 178, 898, 1470, 1713, 1867, 2254, 2961, 2962, 3169
StyI CCWWGG 6 cut(s) 407, 964, 1578, 1611, 1685, 2361
TaaI ACNGT 7 cut(s) 44, 429, 520, 1423, 2512, 2709, 3488
TaiI ACGT 3 cut(s) 1229, 1782, 2828
TaqI TCGA 9 cut(s) 140, 393, 464, 482, 931, 1432, 3038, 3307, 3414
TatI WGTACW 1 cut(s) 2077
TauI GCSGC 6 cut(s) 94, 170, 173, 197, 280, 875
TscAI CASTG 5 cut(s) 612, 1426, 2515, 3580, 3643
TseFI GTSAC 6 cut(s) 268, 423, 1793, 2742, 2758, 3452
Tsp45I GTSAC 6 cut(s) 268, 423, 1793, 2742, 2758, 3452
TspGWI ACGGA 4 cut(s) 146, 1748, 2706, 2777
TspMI CCCGGG 1 cut(s) 2962
TspRI CASTG 5 cut(s) 612, 1426, 2515, 3580, 3643
Van91I CCANNNNNTGG 1 cut(s) 1868
Vha464I CTTAAG 1 cut(s) 2747
VpaK11BI GGWCC 3 cut(s) 1448, 2566, 2957
XapI RAATTY 8 cut(s) 136, 379, 1079, 2146, 2491, 2771, 3206, 3334
XbaI TCTAGA 1 cut(s) 3707
XceI RCATGY 5 cut(s) 629, 1237, 1397, 3151, 3433
XmaI CCCGGG 1 cut(s) 2962
XmiI GTMKAC 2 cut(s) 1403, 2263
XmnI GAANNNNTTC 2 cut(s) 1266, 3252
XspI CTAG 8 cut(s) 1103, 1137, 1676, 2658, 3098, 3102, 3117, 3708
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.