Rroxscaffold_3G00264670

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0004286
Physical Location & Seq
Reverse (-)
58236325 .. 58239315
2991 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00264670.1

Sequence Viewer

Length: 1548 bp
ATGGTTTCAACGAGGAGAAGTGGATCTCTCTCCGGCAATAACAGTAAAAGATCGTCGTCTTCCGACGACAACAAGCCTCAGTCGCCGAAGCGGCAGAAGGTGGATAACAATGGCGTTGGTTCGGAGAAAACGGAGAATTCGAAGGAGGTTTGTACGCCGGCCACGGCGGCGGCTGATCCCGGAGAATGCAGCGCCGCCGGAGAGGCTCAGACAGCCGGAGACGGCGCGACTTCTGTAAAGAGTGAAGCTTCTGCACAAGCCGTGGCGGTGACCCCGCCTCCTGTGGCTGAAGGTAGTGCAGGGTCTTCGCCGGCTGCTGTGCTGGATAAGACTAGGAGTTCGATTTTGGCATGGAGTTCATATCAGAAGCAGAGCCTGAATTCGGGGAGTTTCGAGTTGACAACACCTTGGTGCAGGCTTCTGTCACAGTCTGGACAGAATCTAAACATTGCTATCACCACATCGATTTTTACAATTGGTTCGAGTAGAAGCAGCAATTTCCCTCTGAAGGATAGTACCATTAGTGCGTATCTGTGCAAGATCAAACGCGAACAGCGGGAGAGCGGTGTTGTAACGATTATAGAAAGTATGGGAAACAAGGGATCACTGCAAGTAAATGGGGGGCATGTGAAGAAAGGCAACAGCTGCGTGCTCAACTCGGGTGATGAAGTGGTATTTGGTTCTCTGGGGAACCATGCTTATATTTTTCAACTACTTGTGGCGGAGGGTGCAGTCAAGGGTGCAGACGTTCAAAGTGGTGTCGGAAAATATCTGCACCTTGACAGGAGAGCCGGGGATCCTTCAGATGTGGATGGGGCTTCCATACTGGCTTCTCTTAGCATGAGACCAGAACTATCACGATGGAAGTCTGCGGCTCAGACCACCAATAAAGTCCACCCAGGGGCTGAAGTACCAGCTCAGTCTGTTATTCGAGAAGGTACAGAAGTTGAGCTTGAAGAACACGAAGGCAGCTTGACCCCAAACAGAATGACTGACAAAACAGAAGAGATCGGAGGAATCAACAAGAGTCTTACTCCGGACTGCAACCCAGATTCGGGTGTAGAGGCAGACAATGTATTGGAAGAAAAAAATGAGTGGACAAGGGATTCGCTGCCAGCATCAACGTCAGGCATGTCTGTGCGGTGTGCTGTTTTTAAAGAAGGCATTCATGCAGCAATTCTTGAAGGCAATAGCATGGATGTTTCATTTGATAATTTCCCGTACTATTTGAGTGAGAATACGAAGAATGTGCTGATTGCAGCTTCATTTATACACTTGAAACATAAAGAACATGCAAAGTATACTTCAGAGCTGACCACTGTGAATCCTCGAATATTGCTCTCTGGTCCTGCAGGGTCTGAGATATACCAGGAGATGTTGGCAAAGGCACTTGCTCAATATTTCGGGGCTAAGTTGCTCATATTTGATAGCCAATCACTTTTGGGTGGTTTGTCATCAAAGGAAGCCGAGCTGCCCAAGGATGGAGGCACCAAGGTTGGCGCCAAGCTCTTCAAATGGACCTTCATATGGCCTGGAATCCCAACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA FHA

Protein Analysis

515

Amino Acids

54.59

Weight (kDa)

5.94

Isoelectric Point (pI)

44.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FHA PF00498 158 - 227 1.6e-06 FHA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1487, 1499
AccBSI CCGCTC 1 cut(s) 564
AccI GTMKAC 1 cut(s) 1301
AccII CGCG 2 cut(s) 227, 549
AccIII TCCGGA 1 cut(s) 1036
AclWI GGATC 5 cut(s) 31, 170, 610, 791, 804
AcoI YGGCCR 1 cut(s) 159
AcsI RAATTY 2 cut(s) 136, 379
AcuI CTGAAG 5 cut(s) 309, 527, 786, 927, 1290
AcyI GRCGYC 1 cut(s) 1500
AfaI GTAC 5 cut(s) 154, 517, 912, 940, 1223
AfiI CCNNNNNNNGG 7 cut(s) 382, 508, 901, 1054, 1055, 1481, 1527
AgsI TTSAA 7 cut(s) 9, 710, 752, 956, 1184, 1279, 1513
AjnI CCWGG 3 cut(s) 898, 1368, 1531
AjuI GAANNNNNNNTTGG 2 cut(s) 660, 692
AleI CACNNNNGTG 1 cut(s) 409
AluBI AGCT 9 cut(s) 248, 645, 917, 952, 972, 1262, 1312, 1471, 1507
AluI AGCT 9 cut(s) 248, 645, 917, 952, 972, 1262, 1312, 1471, 1507
Alw21I GWGCWC 1 cut(s) 654
Alw26I GTCTC 2 cut(s) 213, 838
AlwI GGATC 5 cut(s) 31, 170, 610, 791, 804
AlwNI CAGNNNCTG 3 cut(s) 376, 905, 1358
Ama87I CYCGRG 1 cut(s) 658
Aor13HI TCCGGA 1 cut(s) 1036
AoxI GGCC 2 cut(s) 159, 1529
ApeKI GCWGC 9 cut(s) 189, 314, 492, 645, 969, 1111, 1172, 1259, 1471
ApoI RAATTY 2 cut(s) 136, 379
ArsI GACNNNNNNTTYG 4 cut(s) 322, 354, 1090, 1122
Asp700I GAANNNNTTC 1 cut(s) 1164
AspLEI GCGC 3 cut(s) 194, 227, 1502
AspS9I GGNCC 2 cut(s) 1346, 1518
AsuC2I CCSGG 2 cut(s) 180, 793
AsuHPI GGTGA 3 cut(s) 280, 448, 674
AsuII TTCGAA 1 cut(s) 140
AvaI CYCGRG 1 cut(s) 658
AvaII GGWCC 2 cut(s) 1346, 1518
BaeI ACNNNNGTAYC 2 cut(s) 930, 963
BamHI GGATCC 1 cut(s) 796
BanI GGYRCC 2 cut(s) 1487, 1499
BbsI GAAGAC 2 cut(s) 51, 297
Bbv12I GWGCWC 1 cut(s) 654
BbvI GCAGC 9 cut(s) 201, 301, 504, 632, 981, 1098, 1184, 1271, 1458
BccI CCATC 3 cut(s) 806, 855, 1475
BceAI ACGGC 3 cut(s) 180, 238, 245
BcgI CGANNNNNNTGC 4 cut(s) 288, 322, 1231, 1265
BciT130I CCWGG 3 cut(s) 900, 1370, 1533
BcnI CCSGG 2 cut(s) 180, 793
BcoDI GTCTC 2 cut(s) 213, 838
BfaI CTAG 1 cut(s) 333
BfmI CTRYAG 1 cut(s) 1350
BfoI RGCGCY 2 cut(s) 195, 1503
BglI GCCNNNNNGGC 3 cut(s) 91, 167, 203
Bme1390I CCNGG 5 cut(s) 180, 793, 900, 1370, 1533
Bme18I GGWCC 2 cut(s) 1346, 1518
BmeT110I CYCGRG 1 cut(s) 658
BmgT120I GGNCC 2 cut(s) 1346, 1518
BmiI GGNNCC 4 cut(s) 692, 798, 1489, 1501
BmrFI CCNGG 5 cut(s) 180, 793, 900, 1370, 1533
BmsI GCATC 1 cut(s) 1127
BpiI GAAGAC 2 cut(s) 51, 297
BplI GAGNNNNNCTC 2 cut(s) 1018, 1050
Bpu14I TTCGAA 1 cut(s) 140
BpuMI CCSGG 2 cut(s) 180, 793
Bsa29I ATCGAT 1 cut(s) 464
BsaHI GRCGYC 1 cut(s) 1500
BsaI GGTCTC 1 cut(s) 838
BsaJI CCNNGG 8 cut(s) 162, 261, 407, 792, 898, 899, 1476, 1491
BsaWI WCCGGW 1 cut(s) 1036
BsaXI ACNNNNNCTCC 2 cut(s) 262, 292
Bsc4I CCNNNNNNNGG 7 cut(s) 382, 508, 901, 1054, 1055, 1481, 1527
Bse118I RCCGGY 2 cut(s) 157, 310
Bse1I ACTGG 1 cut(s) 831
Bse3DI GCAATG 1 cut(s) 447
BseAI TCCGGA 1 cut(s) 1036
BseBI CCWGG 3 cut(s) 900, 1370, 1533
BseCI ATCGAT 1 cut(s) 464
BseDI CCNNGG 8 cut(s) 162, 261, 407, 792, 898, 899, 1476, 1491
BseGI GGATG 3 cut(s) 817, 1204, 1486
BseLI CCNNNNNNNGG 7 cut(s) 382, 508, 901, 1054, 1055, 1481, 1527
BseMI GCAATG 1 cut(s) 447
BseMII CTCAG 5 cut(s) 92, 221, 890, 932, 1350
BseNI ACTGG 1 cut(s) 831
BseRI GAGGAG 1 cut(s) 28
BseXI GCAGC 9 cut(s) 201, 301, 504, 632, 981, 1098, 1184, 1271, 1458
BsgI GTGCAG 6 cut(s) 237, 318, 433, 750, 758, 762
Bsh1236I CGCG 2 cut(s) 227, 549
BshFI GGCC 2 cut(s) 161, 1531
BshNI GGYRCC 2 cut(s) 1487, 1499
BshVI ATCGAT 1 cut(s) 464
BsiHKAI GWGCWC 1 cut(s) 654
BsiHKCI CYCGRG 1 cut(s) 658
BsiSI CCGG 8 cut(s) 33, 158, 180, 198, 216, 311, 792, 1037
BslI CCNNNNNNNGG 7 cut(s) 382, 508, 901, 1054, 1055, 1481, 1527
BsmAI GTCTC 2 cut(s) 213, 838
BsmBI CGTCTC 1 cut(s) 213
BsmI GAATGC 2 cut(s) 191, 1164
BsnI GGCC 2 cut(s) 161, 1531
Bso31I GGTCTC 1 cut(s) 838
BsoBI CYCGRG 1 cut(s) 658
Bsp119I TTCGAA 1 cut(s) 140
Bsp1286I GDGCHC 1 cut(s) 654
Bsp13I TCCGGA 1 cut(s) 1036
Bsp143I GATC 7 cut(s) 23, 50, 175, 540, 602, 796, 1008
BspANI GGCC 2 cut(s) 161, 1531
BspCNI CTCAG 5 cut(s) 91, 220, 889, 931, 1351
BspDI ATCGAT 1 cut(s) 464
BspEI TCCGGA 1 cut(s) 1036
BspFNI CGCG 2 cut(s) 227, 549
BspLI GGNNCC 4 cut(s) 692, 798, 1489, 1501
BspMAI CTGCAG 1 cut(s) 1354
BspPI GGATC 5 cut(s) 31, 170, 610, 791, 804
BspQI GCTCTTC 1 cut(s) 1514
BspT104I TTCGAA 1 cut(s) 140
BspT107I GGYRCC 2 cut(s) 1487, 1499
BspTNI GGTCTC 1 cut(s) 838
BsrBI CCGCTC 1 cut(s) 564
BsrDI GCAATG 1 cut(s) 447
BsrFI RCCGGY 2 cut(s) 157, 310
BsrI ACTGG 1 cut(s) 831
BssAI RCCGGY 2 cut(s) 157, 310
BssECI CCNNGG 8 cut(s) 162, 261, 407, 792, 898, 899, 1476, 1491
BssMI GATC 7 cut(s) 23, 50, 175, 540, 602, 796, 1008
BssNAI GTATAC 1 cut(s) 1302
BssNI GRCGYC 1 cut(s) 1500
BssT1I CCWWGG 3 cut(s) 407, 1476, 1491
Bst1107I GTATAC 1 cut(s) 1302
Bst2UI CCWGG 3 cut(s) 900, 1370, 1533
Bst4CI ACNGT 3 cut(s) 44, 429, 1321
Bst6I CTCTTC 2 cut(s) 999, 1514
BstACI GRCGYC 1 cut(s) 1500
BstAPI GCANNNNNTGC 1 cut(s) 645
BstBI TTCGAA 1 cut(s) 140
BstC8I GCNNGC 5 cut(s) 159, 312, 416, 650, 1116
BstDEI CTNAG 7 cut(s) 78, 207, 836, 876, 918, 1359, 1410
BstDSI CCRYGG 2 cut(s) 162, 261
BstEII GGTNACC 1 cut(s) 268
BstF5I GGATG 3 cut(s) 817, 1204, 1486
BstFNI CGCG 2 cut(s) 227, 549
BstH2I RGCGCY 2 cut(s) 195, 1503
BstHHI GCGC 3 cut(s) 194, 227, 1502
BstKTI GATC 7 cut(s) 26, 53, 178, 543, 605, 799, 1011
BstMAI GTCTC 2 cut(s) 213, 838
BstMBI GATC 7 cut(s) 23, 50, 175, 540, 602, 796, 1008
BstMWI GCNNNNNNNGC 7 cut(s) 82, 91, 167, 203, 212, 645, 728
BstNI CCWGG 3 cut(s) 900, 1370, 1533
BstNSI RCATGY 3 cut(s) 629, 1135, 1295
BstPI GGTNACC 1 cut(s) 268
BstSCI CCNGG 5 cut(s) 178, 791, 898, 1368, 1531
BstSFI CTRYAG 1 cut(s) 1350
BstUI CGCG 2 cut(s) 227, 549
BstV1I GCAGC 9 cut(s) 201, 301, 504, 632, 981, 1098, 1184, 1271, 1458
BstV2I GAAGAC 2 cut(s) 51, 297
BstX2I RGATCY 2 cut(s) 23, 796
BstYI RGATCY 2 cut(s) 23, 796
BstZ17I GTATAC 1 cut(s) 1302
Bsu15I ATCGAT 1 cut(s) 464
BsuRI GGCC 2 cut(s) 161, 1531
BsuTUI ATCGAT 1 cut(s) 464
BtgI CCRYGG 2 cut(s) 162, 261
BtsCI GGATG 3 cut(s) 817, 1204, 1486
BtsI GCAGTG 1 cut(s) 605
BtsIMutI CAGTG 2 cut(s) 605, 1317
Cac8I GCNNGC 5 cut(s) 159, 312, 416, 650, 1116
CaiI CAGNNNCTG 3 cut(s) 376, 905, 1358
CfoI GCGC 3 cut(s) 194, 227, 1502
Cfr10I RCCGGY 2 cut(s) 157, 310
Cfr13I GGNCC 2 cut(s) 1346, 1518
ClaI ATCGAT 1 cut(s) 464
Csp6I GTAC 5 cut(s) 153, 516, 911, 939, 1222
CviAII CATG 8 cut(s) 351, 626, 695, 841, 1132, 1169, 1195, 1292
CviQI GTAC 5 cut(s) 153, 516, 911, 939, 1222
DdeI CTNAG 7 cut(s) 78, 207, 836, 876, 918, 1359, 1410
DinI GGCGCC 1 cut(s) 1501
DpnI GATC 7 cut(s) 25, 52, 177, 542, 604, 798, 1010
DpnII GATC 7 cut(s) 23, 50, 175, 540, 602, 796, 1008
DraI TTTAAA 1 cut(s) 1156
EaeI YGGCCR 1 cut(s) 159
Eam1104I CTCTTC 2 cut(s) 999, 1514
EarI CTCTTC 2 cut(s) 999, 1514
EciI GGCGGA 1 cut(s) 737
Eco130I CCWWGG 3 cut(s) 407, 1476, 1491
Eco31I GGTCTC 1 cut(s) 838
Eco47I GGWCC 2 cut(s) 1346, 1518
Eco57I CTGAAG 5 cut(s) 309, 527, 786, 927, 1290
Eco88I CYCGRG 1 cut(s) 658
Eco91I GGTNACC 1 cut(s) 268
EcoO65I GGTNACC 1 cut(s) 268
EcoRI GAATTC 2 cut(s) 136, 379
EcoRII CCWGG 3 cut(s) 898, 1368, 1531
EcoT14I CCWWGG 3 cut(s) 407, 1476, 1491
EgeI GGCGCC 1 cut(s) 1501
EheI GGCGCC 1 cut(s) 1501
ErhI CCWWGG 3 cut(s) 407, 1476, 1491
Esp3I CGTCTC 1 cut(s) 213
FaeI CATG 8 cut(s) 354, 629, 698, 844, 1135, 1172, 1198, 1295
FalI AAGNNNNNCTT 2 cut(s) 936, 968
FatI CATG 8 cut(s) 350, 625, 694, 840, 1131, 1168, 1194, 1291
FauI CCCGC 2 cut(s) 282, 549
FauNDI CATATG 1 cut(s) 1526
FblI GTMKAC 1 cut(s) 1301
FokI GGATG 3 cut(s) 824, 1211, 1493
FspBI CTAG 1 cut(s) 333
GlaI GCGC 3 cut(s) 193, 226, 1501
HaeII RGCGCY 2 cut(s) 195, 1503
HaeIII GGCC 2 cut(s) 161, 1531
HapII CCGG 8 cut(s) 33, 158, 180, 198, 216, 311, 792, 1037
HhaI GCGC 3 cut(s) 194, 227, 1502
Hin1I GRCGYC 1 cut(s) 1500
Hin1II CATG 8 cut(s) 354, 629, 698, 844, 1135, 1172, 1198, 1295
Hin6I GCGC 3 cut(s) 192, 225, 1500
HinP1I GCGC 3 cut(s) 192, 225, 1500
HincII GTYRAC 1 cut(s) 399
HindII GTYRAC 1 cut(s) 399
HindIII AAGCTT 1 cut(s) 246
HinfI GANTC 7 cut(s) 439, 1017, 1027, 1052, 1106, 1324, 1536
HpaII CCGG 8 cut(s) 33, 158, 180, 198, 216, 311, 792, 1037
HphI GGTGA 3 cut(s) 280, 448, 674
Hpy166II GTNNAC 4 cut(s) 399, 895, 1098, 1302
Hpy188III TCNNGA 5 cut(s) 432, 858, 932, 1037, 1181
Hpy8I GTNNAC 4 cut(s) 399, 895, 1098, 1302
Hpy99I CGWCG 2 cut(s) 58, 68
HpyCH4III ACNGT 3 cut(s) 44, 429, 1321
HpyCH4IV ACGT 2 cut(s) 747, 1124
HpyF10VI GCNNNNNNNGC 7 cut(s) 82, 91, 167, 203, 212, 645, 728
HpyF3I CTNAG 7 cut(s) 78, 207, 836, 876, 918, 1359, 1410
HpySE526I ACGT 2 cut(s) 747, 1124
Hsp92I GRCGYC 1 cut(s) 1500
Hsp92II CATG 8 cut(s) 354, 629, 698, 844, 1135, 1172, 1198, 1295
HspAI GCGC 3 cut(s) 192, 225, 1500
KasI GGCGCC 1 cut(s) 1499
Kpn2I TCCGGA 1 cut(s) 1036
KroI GCCGGC 2 cut(s) 157, 310
KroNI GCCGGC 2 cut(s) 159, 312
Kzo9I GATC 7 cut(s) 23, 50, 175, 540, 602, 796, 1008
LguI GCTCTTC 1 cut(s) 1514
Lsp1109I GCAGC 9 cut(s) 201, 301, 504, 632, 981, 1098, 1184, 1271, 1458
LweI GCATC 1 cut(s) 1127
MaeI CTAG 1 cut(s) 333
MaeII ACGT 2 cut(s) 747, 1124
MaeIII GTNAC 3 cut(s) 268, 423, 571
MalI GATC 7 cut(s) 25, 52, 177, 542, 604, 798, 1010
MbiI CCGCTC 1 cut(s) 564
MboI GATC 7 cut(s) 23, 50, 175, 540, 602, 796, 1008
MboII GAAGA 8 cut(s) 51, 297, 643, 968, 1016, 1094, 1255, 1501
MfeI CAATTG 1 cut(s) 474
MflI RGATCY 2 cut(s) 23, 796
MhlI GDGCHC 1 cut(s) 654
MluCI AATT 6 cut(s) 136, 379, 474, 496, 1176, 1213
Mly113I GGCGCC 1 cut(s) 1500
MlyI GAGTC 1 cut(s) 1036
MmeI TCCRAC 2 cut(s) 87, 742
MroI TCCGGA 1 cut(s) 1036
MroNI GCCGGC 2 cut(s) 157, 310
MroXI GAANNNNTTC 1 cut(s) 1164
MseI TTAA 1 cut(s) 1155
MslI CAYNNNNRTG 2 cut(s) 409, 1136
MspA1I CMGCKG 2 cut(s) 556, 645
MspI CCGG 8 cut(s) 33, 158, 180, 198, 216, 311, 792, 1037
MspR9I CCNGG 5 cut(s) 180, 793, 900, 1370, 1533
MunI CAATTG 1 cut(s) 474
Mva1269I GAATGC 2 cut(s) 191, 1164
MvaI CCWGG 3 cut(s) 900, 1370, 1533
MvnI CGCG 2 cut(s) 227, 549
MwoI GCNNNNNNNGC 7 cut(s) 82, 91, 167, 203, 212, 645, 728
NaeI GCCGGC 2 cut(s) 159, 312
NarI GGCGCC 1 cut(s) 1500
NciI CCSGG 2 cut(s) 180, 793
NdeI CATATG 1 cut(s) 1526
NdeII GATC 7 cut(s) 23, 50, 175, 540, 602, 796, 1008
NgoMIV GCCGGC 2 cut(s) 157, 310
NlaIII CATG 8 cut(s) 354, 629, 698, 844, 1135, 1172, 1198, 1295
NlaIV GGNNCC 4 cut(s) 692, 798, 1489, 1501
NmeAIII GCCGAG 1 cut(s) 1492
NmuCI GTSAC 2 cut(s) 268, 423
NspI RCATGY 3 cut(s) 629, 1135, 1295
NspV TTCGAA 1 cut(s) 140
OliI CACNNNNGTG 1 cut(s) 409
PasI CCCWGGG 1 cut(s) 899
PciSI GCTCTTC 1 cut(s) 1514
PcsI WCGNNNNNNNCGW 1 cut(s) 137
PctI GAATGC 2 cut(s) 191, 1164
PdiI GCCGGC 2 cut(s) 159, 312
PdmI GAANNNNTTC 1 cut(s) 1164
PfeI GAWTC 6 cut(s) 439, 1017, 1052, 1106, 1324, 1536
PfoI TCCNGGA 1 cut(s) 178
PleI GAGTC 1 cut(s) 1035
PluTI GGCGCC 1 cut(s) 1503
PpsI GAGTC 1 cut(s) 1035
Psp6I CCWGG 3 cut(s) 898, 1368, 1531
PspEI GGTNACC 1 cut(s) 268
PspGI CCWGG 3 cut(s) 898, 1368, 1531
PspN4I GGNNCC 4 cut(s) 692, 798, 1489, 1501
PspPI GGNCC 2 cut(s) 1346, 1518
PstI CTGCAG 1 cut(s) 1354
PstNI CAGNNNCTG 3 cut(s) 376, 905, 1358
PsuI RGATCY 2 cut(s) 23, 796
PvuII CAGCTG 1 cut(s) 645
RsaI GTAC 5 cut(s) 154, 517, 912, 940, 1223
RsaNI GTAC 5 cut(s) 153, 516, 911, 939, 1222
RseI CAYNNNNRTG 2 cut(s) 409, 1136
SapI GCTCTTC 1 cut(s) 1514
SaqAI TTAA 1 cut(s) 1155
Sau3AI GATC 7 cut(s) 23, 50, 175, 540, 602, 796, 1008
Sau96I GGNCC 2 cut(s) 1346, 1518
SbfI CCTGCAGG 1 cut(s) 1354
SchI GAGTC 1 cut(s) 1036
ScrFI CCNGG 5 cut(s) 180, 793, 900, 1370, 1533
SdaI CCTGCAGG 1 cut(s) 1354
SduI GDGCHC 1 cut(s) 654
SfaNI GCATC 1 cut(s) 1127
SfcI CTRYAG 1 cut(s) 1350
SfoI GGCGCC 1 cut(s) 1501
SfuI TTCGAA 1 cut(s) 140
SinI GGWCC 2 cut(s) 1346, 1518
SmiMI CAYNNNNRTG 2 cut(s) 409, 1136
Sse8387I CCTGCAGG 1 cut(s) 1354
Sse9I AATT 6 cut(s) 136, 379, 474, 496, 1176, 1213
SspDI GGCGCC 1 cut(s) 1499
SspI AATATT 2 cut(s) 1335, 1400
SspMI CTAG 1 cut(s) 333
StyD4I CCNGG 5 cut(s) 178, 791, 898, 1368, 1531
StyI CCWWGG 3 cut(s) 407, 1476, 1491
TaaI ACNGT 3 cut(s) 44, 429, 1321
TaiI ACGT 2 cut(s) 750, 1127
TaqI TCGA 7 cut(s) 140, 341, 393, 464, 482, 931, 1330
TasI AATT 6 cut(s) 136, 379, 474, 496, 1176, 1213
TauI GCSGC 5 cut(s) 94, 170, 173, 197, 875
TfiI GAWTC 6 cut(s) 439, 1017, 1052, 1106, 1324, 1536
Tru1I TTAA 1 cut(s) 1155
Tru9I TTAA 1 cut(s) 1155
TscAI CASTG 2 cut(s) 612, 1324
TseFI GTSAC 2 cut(s) 268, 423
TseI GCWGC 9 cut(s) 189, 314, 492, 645, 969, 1111, 1172, 1259, 1471
Tsp45I GTSAC 2 cut(s) 268, 423
TspDTI ATGAA 6 cut(s) 348, 681, 1157, 1194, 1254, 1513
TspGWI ACGGA 1 cut(s) 146
TspRI CASTG 2 cut(s) 612, 1324
VpaK11BI GGWCC 2 cut(s) 1346, 1518
XapI RAATTY 2 cut(s) 136, 379
XceI RCATGY 3 cut(s) 629, 1135, 1295
XmiI GTMKAC 1 cut(s) 1301
XmnI GAANNNNTTC 1 cut(s) 1164
XspI CTAG 1 cut(s) 333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.