Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002576

Physical Location & Seq

Genomic Coordinates Forward (+)

16458068 .. 16460681

Gene Structure 2614 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G34420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1029 bp

ATGGCCGAAGACCCTTCTTTCCTCCCCAAGGATGGTTTTGTCTTGAAGCTTCCTAAAAAGTCATCACTTGTATTGAGAATGGTCGTTCTCCTCTTTGTAATGGTCTGTGCTGTGTACATTTGCTCCATTTGTCTTAAGCAAATAGGAGTTAGTCCAAACTATGGTTTCTTGAACGTTGAAGTGTTTGAGAGGCCTTGTCCTGAGCCTAACATCGAACCGTGGGACATTCCTTTTGTGCATTACCCTAAACCAAAGACATATAACAGGGATGAATGTTCTTGCCACCCGGTTAGGTACTTTGCGATTCTATCGATGCAGAGATCTGGTAGTGGCTGGTTTGAGACTTTGTTAAACAATCATACTAACATAAGCTCCAACGGGGAGATATTTTCTGTGAAAGATAGGAGGGCTAATGTTTCCACCATTTTCGAGACTCTTGACAAAGTCTATAATCTAGACTGGTTGAGTAGTGCCTCTAAGAACGAGTGCACTTCCGCTGTTGGCTTCAAGTGGATGCTTAATCAGGGTCTAATGAAACATCATGAAGAAATAGTAGAATACTTCAAAACCCGAGGCGTCTCTGCGATTTTCCTATTCAGAAAAAACCTATTGCGCCGCATGATATCAGTACTCGCAAACTCTTATGACAGAGATGCTAAGCTACTAAACGGGACTCACAAGTCTCACACCCATTCGGCCAAAGAAGCTGAGATATTAGCAGGTTACAAACCAATGATCAACACAACACTTTTAATAAATGAGCTGAGACAGATTCAAGAAATGACTTTGAAAGCTTTGACTTACTTCAATACCACTCGACATATCCTTGTCTACTACGAAGATGTTGTCAAGAACCTCACGAGACTAGACGATGTACAGGAGTTTCTAAAGGTACCAAAACGTAAGTTAAAGAGTAGGCAAGTGAAGATTCATGGAGGTTCATTGTCAAAACATGTACAGAATTGGGAAGAGGTCATGACCACACTTAAAGGAACCAATTTCGAAAATTTCTTACACCAAGAATTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sulfotransfer_1

Protein Analysis

342

Amino Acids

39.59

Weight (kDa)

9.08

Isoelectric Point (pI)

40.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002576)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15730 AT2G15730 AT2G15730 AT4G34420
fragaria_vesca	FvH4_2g06650 FvH4_2g06650 FvH4_2g34850 FvH4_2g34850 FvH4_2g34850 FvH4_2g34850 FvH4_2g34850
malus_domestica	MD00G1187600.v1.1 MD05G1076200.v1.1 MD10G1090800.v1.1
prunus_persica	Prupe.1G440400_v2.0.a1 Prupe.1G440400_v2.0.a1 Prupe.8G119400_v2.0.a1 Prupe.8G119400_v2.0.a1
pyrus_communis	pycom05g06960 pycom08g08720 pycom10g07430
rosa_chinensis	RchiOBHm_Chr6g0258691 RchiOBHm_Chr6g0307191
rosa_laevigata	RLG00000010728 RLG00000014589
rosa_multiflora	Rmu_sc0000031.1_g000004 Rmu_sc0018893.1_g000001
rosa_roxburghii	Rroxscaffold_7G00161090 Rroxscaffold_7G00206020
rosa_rugosa	Rorug05G0582800 Rorug06G0357600
rosa_samantha	Rh6AG099300 Rh6AG468200 Rh6BG091000 Rh6BG432300 Rh6CG088300 Rh6CG483400 Rh6DG082600 Rh6DG470000
rosa_wichuraiana	Rw6G008620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	679
Acc36I	ACCTGC	1 cut(s)	710
Acc65I	GGTACC	1 cut(s)	892
AccB1I	GGYRCC	1 cut(s)	892
AccB7I	CCANNNNNTGG	1 cut(s)	161
AccI	GTMKAC	1 cut(s)	831
AciI	CCGC	2 cut(s)	495, 616
AclI	AACGTT	1 cut(s)	174
AcoI	YGGCCR	2 cut(s)	3, 696
AcsI	RAATTY	2 cut(s)	1006, 1022
AcyI	GRCGYC	1 cut(s)	576
AfaI	GTAC	6 cut(s)	116, 296, 630, 876, 894, 957
AfiI	CCNNNNNNNGG	3 cut(s)	28, 32, 161
AflII	CTTAAG	1 cut(s)	134
AflIII	ACRYGT	1 cut(s)	952
AgsI	TTSAA	8 cut(s)	46, 172, 179, 508, 565, 776, 790, 808
AluBI	AGCT	6 cut(s)	49, 372, 661, 707, 763, 794
AluI	AGCT	6 cut(s)	49, 372, 661, 707, 763, 794
Alw21I	GWGCWC	1 cut(s)	491
Alw26I	GTCTC	6 cut(s)	335, 425, 583, 687, 760, 856
Alw44I	GTGCAC	1 cut(s)	487
Ama87I	CYCGRG	1 cut(s)	570
AoxI	GGCC	3 cut(s)	3, 191, 696
ApaLI	GTGCAC	1 cut(s)	487
ApoI	RAATTY	2 cut(s)	1006, 1022
ArsI	GACNNNNNNTTYG	4 cut(s)	215, 247, 831, 863
Asp718I	GGTACC	1 cut(s)	892
AspLEI	GCGC	1 cut(s)	615
AsuC2I	CCSGG	1 cut(s)	287
AsuII	TTCGAA	1 cut(s)	1002
AvaI	CYCGRG	1 cut(s)	570
BaeGI	GKGCMC	1 cut(s)	491
BanI	GGYRCC	1 cut(s)	892
BauI	CACGAG	1 cut(s)	859
BbsI	GAAGAC	1 cut(s)	15
Bbv12I	GWGCWC	1 cut(s)	491
BccI	CCATC	1 cut(s)	26
BclI	TGATCA	1 cut(s)	735
BcnI	CCSGG	1 cut(s)	287
BcoDI	GTCTC	6 cut(s)	335, 425, 583, 687, 760, 856
BfaI	CTAG	2 cut(s)	455, 866
BfrI	CTTAAG	1 cut(s)	134
BfuAI	ACCTGC	1 cut(s)	710
BglII	AGATCT	1 cut(s)	320
BisI	GCNGC	1 cut(s)	616
BlpI	GCTNAGC	1 cut(s)	657
BlsI	GCNGC	1 cut(s)	617
BmcAI	AGTACT	1 cut(s)	630
Bme1390I	CCNGG	1 cut(s)	287
BmeT110I	CYCGRG	1 cut(s)	570
BmiI	GGNNCC	2 cut(s)	894, 994
BmrFI	CCNGG	1 cut(s)	287
BmsI	GCATC	3 cut(s)	303, 504, 643
BpiI	GAAGAC	1 cut(s)	15
Bpu10I	CCTNAGC	1 cut(s)	201
Bpu1102I	GCTNAGC	1 cut(s)	657
Bpu14I	TTCGAA	1 cut(s)	1002
BpuMI	CCSGG	1 cut(s)	287
Bsa29I	ATCGAT	1 cut(s)	311
BsaHI	GRCGYC	1 cut(s)	576
BsaJI	CCNNGG	3 cut(s)	27, 218, 571
BsaXI	ACNNNNNCTCC	4 cut(s)	107, 137, 356, 386
Bsc4I	CCNNNNNNNGG	3 cut(s)	28, 32, 161
Bse1I	ACTGG	1 cut(s)	464
BseCI	ATCGAT	1 cut(s)	311
BseDI	CCNNGG	3 cut(s)	27, 218, 571
BseGI	GGATG	3 cut(s)	37, 274, 519
BseLI	CCNNNNNNNGG	3 cut(s)	28, 32, 161
BseMII	CTCAG	3 cut(s)	192, 699, 755
BseNI	ACTGG	1 cut(s)	464
BseRI	GAGGAG	1 cut(s)	80
BseSI	GKGCMC	1 cut(s)	491
BshFI	GGCC	3 cut(s)	5, 193, 698
BshNI	GGYRCC	1 cut(s)	892
BshVI	ATCGAT	1 cut(s)	311
BsiHKAI	GWGCWC	1 cut(s)	491
BsiHKCI	CYCGRG	1 cut(s)	570
BsiSI	CCGG	1 cut(s)	287
BslFI	GGGAC	2 cut(s)	236, 685
BslI	CCNNNNNNNGG	3 cut(s)	28, 32, 161
BsmAI	GTCTC	6 cut(s)	335, 425, 583, 687, 760, 856
BsmBI	CGTCTC	1 cut(s)	583
BsmFI	GGGAC	2 cut(s)	236, 685
BsnI	GGCC	3 cut(s)	5, 193, 698
BsoBI	CYCGRG	1 cut(s)	570
Bsp119I	TTCGAA	1 cut(s)	1002
Bsp1286I	GDGCHC	1 cut(s)	491
Bsp1407I	TGTACA	3 cut(s)	114, 874, 955
Bsp143I	GATC	2 cut(s)	320, 735
Bsp1720I	GCTNAGC	1 cut(s)	657
BspACI	CCGC	2 cut(s)	495, 616
BspANI	GGCC	3 cut(s)	5, 193, 698
BspCNI	CTCAG	3 cut(s)	193, 700, 756
BspDI	ATCGAT	1 cut(s)	311
BspHI	TCATGA	2 cut(s)	541, 975
BspLI	GGNNCC	2 cut(s)	894, 994
BspMI	ACCTGC	1 cut(s)	710
BspT104I	TTCGAA	1 cut(s)	1002
BspT107I	GGYRCC	1 cut(s)	892
BspTI	CTTAAG	1 cut(s)	134
BsrGI	TGTACA	3 cut(s)	114, 874, 955
BsrI	ACTGG	1 cut(s)	464
BssECI	CCNNGG	3 cut(s)	27, 218, 571
BssMI	GATC	2 cut(s)	320, 735
BssNI	GRCGYC	1 cut(s)	576
BssSI	CACGAG	1 cut(s)	859
BssT1I	CCWWGG	1 cut(s)	27
Bst2BI	CACGAG	1 cut(s)	859
Bst4CI	ACNGT	1 cut(s)	219
Bst6I	CTCTTC	1 cut(s)	963
BstACI	GRCGYC	1 cut(s)	576
BstAFI	CTTAAG	1 cut(s)	134
BstAUI	TGTACA	3 cut(s)	114, 874, 955
BstBI	TTCGAA	1 cut(s)	1002
BstDEI	CTNAG	5 cut(s)	201, 477, 657, 708, 764
BstDSI	CCRYGG	1 cut(s)	218
BstENI	CCTNNNNNAGG	1 cut(s)	26
BstF5I	GGATG	3 cut(s)	37, 274, 519
BstHHI	GCGC	1 cut(s)	615
BstKTI	GATC	2 cut(s)	323, 738
BstMAI	GTCTC	6 cut(s)	335, 425, 583, 687, 760, 856
BstMBI	GATC	2 cut(s)	320, 735
BstMWI	GCNNNNNNNGC	1 cut(s)	704
BstNSI	RCATGY	1 cut(s)	956
BstSCI	CCNGG	1 cut(s)	285
BstSLI	GKGCMC	1 cut(s)	491
BstV2I	GAAGAC	1 cut(s)	15
BstX2I	RGATCY	1 cut(s)	320
BstYI	RGATCY	1 cut(s)	320
Bsu15I	ATCGAT	1 cut(s)	311
BsuRI	GGCC	3 cut(s)	5, 193, 698
BsuTUI	ATCGAT	1 cut(s)	311
BtgI	CCRYGG	1 cut(s)	218
BtsCI	GGATG	3 cut(s)	37, 274, 519
BveI	ACCTGC	1 cut(s)	710
CciI	TCATGA	2 cut(s)	541, 975
CfoI	GCGC	1 cut(s)	615
ClaI	ATCGAT	1 cut(s)	311
CseI	GACGC	1 cut(s)	565
Csp6I	GTAC	6 cut(s)	115, 295, 629, 875, 893, 956
CviAII	CATG	5 cut(s)	542, 619, 932, 953, 976
CviQI	GTAC	6 cut(s)	115, 295, 629, 875, 893, 956
DdeI	CTNAG	5 cut(s)	201, 477, 657, 708, 764
DpnI	GATC	2 cut(s)	322, 737
DpnII	GATC	2 cut(s)	320, 735
DrdI	GACNNNNNNGTC	1 cut(s)	679
DseDI	GACNNNNNNGTC	1 cut(s)	679
EaeI	YGGCCR	2 cut(s)	3, 696
Eam1104I	CTCTTC	1 cut(s)	963
EarI	CTCTTC	1 cut(s)	963
Eco130I	CCWWGG	1 cut(s)	27
Eco147I	AGGCCT	1 cut(s)	193
Eco32I	GATATC	1 cut(s)	624
Eco88I	CYCGRG	1 cut(s)	570
EcoNI	CCTNNNNNAGG	1 cut(s)	26
EcoRV	GATATC	1 cut(s)	624
EcoT14I	CCWWGG	1 cut(s)	27
ErhI	CCWWGG	1 cut(s)	27
Esp3I	CGTCTC	1 cut(s)	583
FaeI	CATG	5 cut(s)	545, 622, 935, 956, 979
FaqI	GGGAC	2 cut(s)	236, 685
FatI	CATG	5 cut(s)	541, 618, 931, 952, 975
FbaI	TGATCA	1 cut(s)	735
FblI	GTMKAC	1 cut(s)	831
Fnu4HI	GCNGC	1 cut(s)	616
FokI	GGATG	3 cut(s)	44, 281, 526
Fsp4HI	GCNGC	1 cut(s)	616
FspBI	CTAG	2 cut(s)	455, 866
GlaI	GCGC	1 cut(s)	614
GluI	GCNGC	1 cut(s)	616
HaeIII	GGCC	3 cut(s)	5, 193, 698
HapII	CCGG	1 cut(s)	287
HgaI	GACGC	1 cut(s)	565
HhaI	GCGC	1 cut(s)	615
Hin1I	GRCGYC	1 cut(s)	576
Hin1II	CATG	5 cut(s)	545, 622, 935, 956, 979
Hin6I	GCGC	1 cut(s)	613
HinP1I	GCGC	1 cut(s)	613
HindIII	AAGCTT	2 cut(s)	47, 792
HinfI	GANTC	5 cut(s)	304, 433, 673, 772, 928
HpaII	CCGG	1 cut(s)	287
Hpy166II	GTNNAC	3 cut(s)	115, 489, 832
Hpy188I	TCNGA	1 cut(s)	599
Hpy8I	GTNNAC	3 cut(s)	115, 489, 832
HpyAV	CCTTC	1 cut(s)	24
HpyCH4III	ACNGT	1 cut(s)	219
HpyCH4IV	ACGT	2 cut(s)	174, 901
HpyCH4V	TGCA	3 cut(s)	238, 316, 489
HpyF10VI	GCNNNNNNNGC	1 cut(s)	704
HpyF3I	CTNAG	5 cut(s)	201, 477, 657, 708, 764
HpySE526I	ACGT	2 cut(s)	174, 901
Hsp92I	GRCGYC	1 cut(s)	576
Hsp92II	CATG	5 cut(s)	545, 622, 935, 956, 979
HspAI	GCGC	1 cut(s)	613
KpnI	GGTACC	1 cut(s)	896
Ksp22I	TGATCA	1 cut(s)	735
Kzo9I	GATC	2 cut(s)	320, 735
LmnI	GCTCC	2 cut(s)	128, 377
LpnPI	CCDG	9 cut(s)	213, 250, 300, 309, 319, 445, 509, 705, 863
LweI	GCATC	3 cut(s)	303, 504, 643
MaeI	CTAG	2 cut(s)	455, 866
MaeII	ACGT	2 cut(s)	174, 901
MaeIII	GTNAC	1 cut(s)	722
MalI	GATC	2 cut(s)	322, 737
MboI	GATC	2 cut(s)	320, 735
MboII	GAAGA	5 cut(s)	20, 557, 851, 937, 980
MflI	RGATCY	1 cut(s)	320
MhlI	GDGCHC	1 cut(s)	491
MluCI	AATT	4 cut(s)	961, 997, 1006, 1022
MlyI	GAGTC	2 cut(s)	427, 667
MmeI	TCCRAC	1 cut(s)	399
MnlI	CCTC	9 cut(s)	32, 101, 183, 399, 484, 566, 866, 929, 964
MseI	TTAA	7 cut(s)	135, 350, 519, 752, 908, 987, 1027
MspA1I	CMGCKG	1 cut(s)	497
MspCI	CTTAAG	1 cut(s)	134
MspI	CCGG	1 cut(s)	287
MspR9I	CCNGG	1 cut(s)	287
MwoI	GCNNNNNNNGC	1 cut(s)	704
NciI	CCSGG	1 cut(s)	287
NdeII	GATC	2 cut(s)	320, 735
NlaIII	CATG	5 cut(s)	545, 622, 935, 956, 979
NlaIV	GGNNCC	2 cut(s)	894, 994
NspI	RCATGY	1 cut(s)	956
NspV	TTCGAA	1 cut(s)	1002
PagI	TCATGA	2 cut(s)	541, 975
PceI	AGGCCT	1 cut(s)	193
PciI	ACATGT	1 cut(s)	952
PfeI	GAWTC	3 cut(s)	304, 772, 928
PflFI	GACNNNGTC	1 cut(s)	443
PflMI	CCANNNNNTGG	1 cut(s)	161
PkrI	GCNGC	1 cut(s)	617
PleI	GAGTC	2 cut(s)	427, 667
PpsI	GAGTC	2 cut(s)	427, 667
PscI	ACATGT	1 cut(s)	952
Psp1406I	AACGTT	1 cut(s)	174
PspN4I	GGNNCC	2 cut(s)	894, 994
PsuI	RGATCY	1 cut(s)	320
PsyI	GACNNNGTC	1 cut(s)	443
RsaI	GTAC	6 cut(s)	116, 296, 630, 876, 894, 957
RsaNI	GTAC	6 cut(s)	115, 295, 629, 875, 893, 956
SaqAI	TTAA	7 cut(s)	135, 350, 519, 752, 908, 987, 1027
SatI	GCNGC	1 cut(s)	616
Sau3AI	GATC	2 cut(s)	320, 735
ScaI	AGTACT	1 cut(s)	630
SchI	GAGTC	2 cut(s)	427, 667
ScrFI	CCNGG	1 cut(s)	287
SduI	GDGCHC	1 cut(s)	491
SfaNI	GCATC	3 cut(s)	303, 504, 643
SfuI	TTCGAA	1 cut(s)	1002
SmlI	CTYRAG	1 cut(s)	134
SmoI	CTYRAG	1 cut(s)	134
Sse9I	AATT	4 cut(s)	961, 997, 1006, 1022
SseBI	AGGCCT	1 cut(s)	193
SsiI	CCGC	2 cut(s)	495, 616
SspMI	CTAG	2 cut(s)	455, 866
StuI	AGGCCT	1 cut(s)	193
StyD4I	CCNGG	1 cut(s)	285
StyI	CCWWGG	1 cut(s)	27
TaaI	ACNGT	1 cut(s)	219
TaiI	ACGT	2 cut(s)	177, 904
TaqI	TCGA	5 cut(s)	213, 311, 429, 817, 1002
TasI	AATT	4 cut(s)	961, 997, 1006, 1022
TatI	WGTACW	4 cut(s)	114, 628, 874, 955
TauI	GCSGC	1 cut(s)	618
TfiI	GAWTC	3 cut(s)	304, 772, 928
Tru1I	TTAA	7 cut(s)	135, 350, 519, 752, 908, 987, 1027
Tru9I	TTAA	7 cut(s)	135, 350, 519, 752, 908, 987, 1027
TspDTI	ATGAA	5 cut(s)	285, 548, 558, 920, 930
Tth111I	GACNNNGTC	1 cut(s)	443
Van91I	CCANNNNNTGG	1 cut(s)	161
Vha464I	CTTAAG	1 cut(s)	134
VneI	GTGCAC	1 cut(s)	487
XagI	CCTNNNNNAGG	1 cut(s)	26
XapI	RAATTY	2 cut(s)	1006, 1022
XbaI	TCTAGA	1 cut(s)	454
XceI	RCATGY	1 cut(s)	956
XmiI	GTMKAC	1 cut(s)	831
XspI	CTAG	2 cut(s)	455, 866
ZrmI	AGTACT	1 cut(s)	630

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.