Rh6BG091000

Belongs to the sulfotransferase 1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0002576
Physical Location & Seq
Forward (+)
14394493 .. 14398408
3916 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG091000.1

Sequence Viewer

Length: 876 bp
ATGGCTGATGATCACTGCTCTTTCACCAAGGATATATTAAAGACGCCAAAGAAATCGCCTTTGGTGCTGAGGACGATTGTCGTGTTGTTTGTAATGGTCTGTGGTGTCTATATATGCTCGATTTGTTTAAAGCAAATCAAGACCGGTACCACACTCAGATTCTTAAGCATCCCCGAGGTGATTCAAAGGCCTTGCCAGAAACCTGATATTGAACCGGAAGAAGCGCCTTATGTGCACTTCCCAAAGCCCACAACTTATAGCAGGGCTGAATGTGCGTGCAATCCTGTGAGATATTTTGCAATTTTCTCGATGCAGAGGTCTGGGAGTGGTTGGTTTGAGACGCTATTGAATAATCATACTAACATAAGCTCAAATGGGGAGGTTTTCTCTGTTAAAGTCAGGAGAAGTAACATGTCAACAATTACAGAGACTTTGGACAGAGTATACAATCTAGATTGGTTCAGTAGTGCCTCAAAGAATGAGTGCACAGCTGCAGTTGGCTTAAAGTGGATGCTTAATCAGGGATTGATGCAGAATCATGAACAAATAGTGGAGTACTTCAACACTCGAGGTGTTGCTGCTATCTTTCTCTTTCGAAGAAATCTGTTGCGTAGGTTGATCTCCGTGCTTGCAAATTCTTATGATCGAGAGGCGAAGCCACTGAACGGAACCCACAAATCTCACGTGCACTCTCATCAAGAGGCTGAGATACTTGCAAAATACAAGCCTAAAATCAATGCAACTTTGCTTATAGCCAACCTGAAGCAAGTTGAGAATACAACTGCCAAAGCATTGGAATATTTCAAGAACACCCGACATATTATCCTGTATTATGAGGATGTTGTTAAAAACCGCACTGTAAGACGCTTATATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Sulfotransfer_1

Protein Analysis

291

Amino Acids

33.47

Weight (kDa)

9.45

Isoelectric Point (pI)

43.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 146
AccB1I GGYRCC 1 cut(s) 146
AccI GTMKAC 1 cut(s) 444
AciI CCGC 1 cut(s) 853
AcsI RAATTY 1 cut(s) 634
AcuI CTGAAG 1 cut(s) 782
AcvI CACGTG 1 cut(s) 685
AcyI GRCGYC 1 cut(s) 44
AfaI GTAC 2 cut(s) 148, 557
AfiI CCNNNNNNNGG 1 cut(s) 665
AflII CTTAAG 1 cut(s) 163
AflIII ACRYGT 1 cut(s) 411
AgeI ACCGGT 1 cut(s) 143
AgsI TTSAA 5 cut(s) 185, 212, 349, 562, 805
AjuI GAANNNNNNNTTGG 2 cut(s) 44, 76
AluBI AGCT 2 cut(s) 369, 491
AluI AGCT 2 cut(s) 369, 491
Alw21I GWGCWC 3 cut(s) 237, 488, 690
Alw26I GTCTC 2 cut(s) 332, 422
Alw44I GTGCAC 3 cut(s) 233, 484, 686
Ama87I CYCGRG 2 cut(s) 173, 567
AoxI GGCC 1 cut(s) 188
ApaLI GTGCAC 3 cut(s) 233, 484, 686
ApeKI GCWGC 2 cut(s) 491, 578
ApoI RAATTY 1 cut(s) 634
AsiGI ACCGGT 1 cut(s) 143
Asp718I GGTACC 1 cut(s) 146
AspLEI GCGC 1 cut(s) 226
AsuHPI GGTGA 2 cut(s) 16, 190
AsuII TTCGAA 1 cut(s) 595
AvaI CYCGRG 2 cut(s) 173, 567
BaeGI GKGCMC 3 cut(s) 237, 488, 690
BanI GGYRCC 1 cut(s) 146
BbrPI CACGTG 1 cut(s) 685
Bbv12I GWGCWC 3 cut(s) 237, 488, 690
BbvCI CCTCAGC 1 cut(s) 68
BbvI GCAGC 2 cut(s) 478, 565
BcgI CGANNNNNNTGC 2 cut(s) 288, 322
BclI TGATCA 1 cut(s) 10
BcoDI GTCTC 2 cut(s) 332, 422
BfaI CTAG 1 cut(s) 452
BfmI CTRYAG 1 cut(s) 492
BfoI RGCGCY 1 cut(s) 227
BfrI CTTAAG 1 cut(s) 163
BisI GCNGC 2 cut(s) 492, 579
BlsI GCNGC 2 cut(s) 493, 580
BmcAI AGTACT 1 cut(s) 557
BmeT110I CYCGRG 2 cut(s) 173, 567
BmiI GGNNCC 2 cut(s) 148, 670
BmsI GCATC 4 cut(s) 177, 300, 501, 519
BoxI GACNNNNGTC 1 cut(s) 77
BplI GAGNNNNNCTC 2 cut(s) 371, 403
Bpu10I CCTNAGC 1 cut(s) 68
Bpu14I TTCGAA 1 cut(s) 595
BsaAI YACGTR 1 cut(s) 685
BsaHI GRCGYC 1 cut(s) 44
BsaJI CCNNGG 2 cut(s) 27, 174
BsaWI WCCGGW 2 cut(s) 143, 214
Bsc4I CCNNNNNNNGG 1 cut(s) 665
Bse118I RCCGGY 1 cut(s) 143
BseDI CCNNGG 2 cut(s) 27, 174
BseGI GGATG 3 cut(s) 168, 516, 844
BseLI CCNNNNNNNGG 1 cut(s) 665
BseMII CTCAG 3 cut(s) 59, 169, 696
BseSI GKGCMC 3 cut(s) 237, 488, 690
BseXI GCAGC 2 cut(s) 478, 565
BshFI GGCC 1 cut(s) 190
BshNI GGYRCC 1 cut(s) 146
BshTI ACCGGT 1 cut(s) 143
BsiHKAI GWGCWC 3 cut(s) 237, 488, 690
BsiHKCI CYCGRG 2 cut(s) 173, 567
BsiSI CCGG 2 cut(s) 144, 215
BslI CCNNNNNNNGG 1 cut(s) 665
BsmAI GTCTC 2 cut(s) 332, 422
BsmBI CGTCTC 1 cut(s) 332
BsnI GGCC 1 cut(s) 190
BsoBI CYCGRG 2 cut(s) 173, 567
Bsp119I TTCGAA 1 cut(s) 595
Bsp1286I GDGCHC 3 cut(s) 237, 488, 690
Bsp143I GATC 3 cut(s) 10, 618, 643
BspACI CCGC 1 cut(s) 853
BspANI GGCC 1 cut(s) 190
BspCNI CTCAG 3 cut(s) 60, 168, 697
BspHI TCATGA 1 cut(s) 538
BspLI GGNNCC 2 cut(s) 148, 670
BspMAI CTGCAG 1 cut(s) 496
BspT104I TTCGAA 1 cut(s) 595
BspT107I GGYRCC 1 cut(s) 146
BspTI CTTAAG 1 cut(s) 163
BsrFI RCCGGY 1 cut(s) 143
BssAI RCCGGY 1 cut(s) 143
BssECI CCNNGG 2 cut(s) 27, 174
BssMI GATC 3 cut(s) 10, 618, 643
BssNAI GTATAC 1 cut(s) 445
BssNI GRCGYC 1 cut(s) 44
BssT1I CCWWGG 1 cut(s) 27
Bst1107I GTATAC 1 cut(s) 445
Bst4CI ACNGT 1 cut(s) 859
BstACI GRCGYC 1 cut(s) 44
BstAFI CTTAAG 1 cut(s) 163
BstBAI YACGTR 1 cut(s) 685
BstBI TTCGAA 1 cut(s) 595
BstC8I GCNNGC 2 cut(s) 277, 630
BstDEI CTNAG 3 cut(s) 68, 155, 705
BstF5I GGATG 3 cut(s) 168, 516, 844
BstH2I RGCGCY 1 cut(s) 227
BstHHI GCGC 1 cut(s) 226
BstKTI GATC 3 cut(s) 13, 621, 646
BstMAI GTCTC 2 cut(s) 332, 422
BstMBI GATC 3 cut(s) 10, 618, 643
BstMWI GCNNNNNNNGC 3 cut(s) 64, 232, 272
BstNSI RCATGY 1 cut(s) 415
BstPAI GACNNNNGTC 1 cut(s) 77
BstSFI CTRYAG 1 cut(s) 492
BstSLI GKGCMC 3 cut(s) 237, 488, 690
BstV1I GCAGC 2 cut(s) 478, 565
BstXI CCANNNNNNTGG 1 cut(s) 793
BstZ17I GTATAC 1 cut(s) 445
BsuRI GGCC 1 cut(s) 190
BtsCI GGATG 3 cut(s) 168, 516, 844
BtsI GCAGTG 1 cut(s) 13
BtsIMutI CAGTG 3 cut(s) 13, 659, 855
Cac8I GCNNGC 2 cut(s) 277, 630
CciI TCATGA 1 cut(s) 538
CfoI GCGC 1 cut(s) 226
Cfr10I RCCGGY 1 cut(s) 143
CseI GACGC 2 cut(s) 52, 349
Csp6I GTAC 2 cut(s) 147, 556
CspAI ACCGGT 1 cut(s) 143
CviAII CATG 2 cut(s) 412, 539
CviQI GTAC 2 cut(s) 147, 556
DdeI CTNAG 3 cut(s) 68, 155, 705
DpnI GATC 3 cut(s) 12, 620, 645
DpnII GATC 3 cut(s) 10, 618, 643
DraI TTTAAA 1 cut(s) 129
Eco130I CCWWGG 1 cut(s) 27
Eco147I AGGCCT 1 cut(s) 190
Eco57I CTGAAG 1 cut(s) 782
Eco72I CACGTG 1 cut(s) 685
Eco88I CYCGRG 2 cut(s) 173, 567
EcoT14I CCWWGG 1 cut(s) 27
ErhI CCWWGG 1 cut(s) 27
Esp3I CGTCTC 1 cut(s) 332
FaeI CATG 2 cut(s) 415, 542
FatI CATG 2 cut(s) 411, 538
FbaI TGATCA 1 cut(s) 10
FblI GTMKAC 1 cut(s) 444
Fnu4HI GCNGC 2 cut(s) 492, 579
FokI GGATG 3 cut(s) 155, 523, 851
Fsp4HI GCNGC 2 cut(s) 492, 579
FspBI CTAG 1 cut(s) 452
GlaI GCGC 1 cut(s) 225
GluI GCNGC 2 cut(s) 492, 579
HaeII RGCGCY 1 cut(s) 227
HaeIII GGCC 1 cut(s) 190
HapII CCGG 2 cut(s) 144, 215
HgaI GACGC 2 cut(s) 52, 349
HhaI GCGC 1 cut(s) 226
Hin1I GRCGYC 1 cut(s) 44
Hin1II CATG 2 cut(s) 415, 542
Hin6I GCGC 1 cut(s) 224
HinP1I GCGC 1 cut(s) 224
HincII GTYRAC 1 cut(s) 417
HindII GTYRAC 1 cut(s) 417
HinfI GANTC 3 cut(s) 159, 181, 535
HpaII CCGG 2 cut(s) 144, 215
HphI GGTGA 2 cut(s) 16, 190
Hpy166II GTNNAC 5 cut(s) 235, 417, 445, 486, 688
Hpy188I TCNGA 1 cut(s) 158
Hpy188III TCNNGA 8 cut(s) 139, 307, 400, 452, 539, 647, 698, 805
Hpy8I GTNNAC 5 cut(s) 235, 417, 445, 486, 688
HpyCH4III ACNGT 1 cut(s) 859
HpyCH4IV ACGT 1 cut(s) 684
HpyF10VI GCNNNNNNNGC 3 cut(s) 64, 232, 272
HpyF3I CTNAG 3 cut(s) 68, 155, 705
HpySE526I ACGT 1 cut(s) 684
Hsp92I GRCGYC 1 cut(s) 44
Hsp92II CATG 2 cut(s) 415, 542
HspAI GCGC 1 cut(s) 224
KpnI GGTACC 1 cut(s) 150
Ksp22I TGATCA 1 cut(s) 10
Kzo9I GATC 3 cut(s) 10, 618, 643
Lsp1109I GCAGC 2 cut(s) 478, 565
LweI GCATC 4 cut(s) 177, 300, 501, 519
MaeI CTAG 1 cut(s) 452
MaeII ACGT 1 cut(s) 684
MaeIII GTNAC 1 cut(s) 407
MalI GATC 3 cut(s) 12, 620, 645
MboI GATC 3 cut(s) 10, 618, 643
MboII GAAGA 2 cut(s) 230, 609
MhlI GDGCHC 3 cut(s) 237, 488, 690
MluCI AATT 3 cut(s) 300, 420, 634
MnlI CCTC 9 cut(s) 63, 169, 309, 373, 481, 563, 643, 694, 829
MseI TTAA 8 cut(s) 38, 128, 164, 393, 503, 516, 846, 874
MspA1I CMGCKG 1 cut(s) 491
MspCI CTTAAG 1 cut(s) 163
MspI CCGG 2 cut(s) 144, 215
MwoI GCNNNNNNNGC 3 cut(s) 64, 232, 272
NdeII GATC 3 cut(s) 10, 618, 643
NlaIII CATG 2 cut(s) 415, 542
NlaIV GGNNCC 2 cut(s) 148, 670
NspI RCATGY 1 cut(s) 415
NspV TTCGAA 1 cut(s) 595
PaeR7I CTCGAG 1 cut(s) 567
PagI TCATGA 1 cut(s) 538
PceI AGGCCT 1 cut(s) 190
PciI ACATGT 1 cut(s) 411
PfeI GAWTC 3 cut(s) 159, 181, 535
PinAI ACCGGT 1 cut(s) 143
PkrI GCNGC 2 cut(s) 493, 580
PmaCI CACGTG 1 cut(s) 685
PmlI CACGTG 1 cut(s) 685
Ppu21I YACGTR 1 cut(s) 685
PscI ACATGT 1 cut(s) 411
PshAI GACNNNNGTC 1 cut(s) 77
PspCI CACGTG 1 cut(s) 685
PspN4I GGNNCC 2 cut(s) 148, 670
PspXI VCTCGAGB 1 cut(s) 567
PstI CTGCAG 1 cut(s) 496
PvuII CAGCTG 1 cut(s) 491
RsaI GTAC 2 cut(s) 148, 557
RsaNI GTAC 2 cut(s) 147, 556
SaqAI TTAA 8 cut(s) 38, 128, 164, 393, 503, 516, 846, 874
SatI GCNGC 2 cut(s) 492, 579
Sau3AI GATC 3 cut(s) 10, 618, 643
ScaI AGTACT 1 cut(s) 557
SduI GDGCHC 3 cut(s) 237, 488, 690
SfaNI GCATC 4 cut(s) 177, 300, 501, 519
SfcI CTRYAG 1 cut(s) 492
Sfr274I CTCGAG 1 cut(s) 567
SfuI TTCGAA 1 cut(s) 595
SlaI CTCGAG 1 cut(s) 567
SmlI CTYRAG 2 cut(s) 163, 567
SmoI CTYRAG 2 cut(s) 163, 567
Sse9I AATT 3 cut(s) 300, 420, 634
SseBI AGGCCT 1 cut(s) 190
SsiI CCGC 1 cut(s) 853
SspI AATATT 1 cut(s) 800
SspMI CTAG 1 cut(s) 452
StuI AGGCCT 1 cut(s) 190
StyI CCWWGG 1 cut(s) 27
TaaI ACNGT 1 cut(s) 859
TaiI ACGT 1 cut(s) 687
TaqI TCGA 5 cut(s) 119, 308, 568, 595, 646
TasI AATT 3 cut(s) 300, 420, 634
TatI WGTACW 1 cut(s) 555
TfiI GAWTC 3 cut(s) 159, 181, 535
Tru1I TTAA 8 cut(s) 38, 128, 164, 393, 503, 516, 846, 874
Tru9I TTAA 8 cut(s) 38, 128, 164, 393, 503, 516, 846, 874
TscAI CASTG 3 cut(s) 20, 666, 862
TseI GCWGC 2 cut(s) 491, 578
TspDTI ATGAA 1 cut(s) 555
TspGWI ACGGA 2 cut(s) 613, 681
TspRI CASTG 3 cut(s) 20, 666, 862
Vha464I CTTAAG 1 cut(s) 163
VneI GTGCAC 3 cut(s) 233, 484, 686
XapI RAATTY 1 cut(s) 634
XbaI TCTAGA 1 cut(s) 451
XceI RCATGY 1 cut(s) 415
XhoI CTCGAG 1 cut(s) 567
XmiI GTMKAC 1 cut(s) 444
XspI CTAG 1 cut(s) 452
ZrmI AGTACT 1 cut(s) 557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.