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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13560 |
| fragaria_vesca | FvH4_7g20871 FvH4_7g20871 |
| malus_domestica | MD07G1186500.v1.1 MD13G1157000.v1.1 |
| prunus_persica | Prupe.2G225300_v2.0.a1 |
| pyrus_communis | pycom01g14560 pycom07g17780 |
| rosa_chinensis | RchiOBHm_Chr1g0365121 RchiOBHm_Chr7g0221351 |
| rosa_laevigata | RLG00000014849 RLG00000027440 RLG00000028869 |
| rosa_multiflora | Rmu_co8467635.1_g000001 Rmu_sc0001688.1_g000008 |
| rosa_roxburghii | Rroxscaffold_4G00291410 Rroxscaffold_4G00291920 |
| rosa_rugosa | Rorug01G0320000 Rorug01G0320100 |
| rosa_samantha | Rh1AG328700 Rh1BG290300 Rh1CG307000 Rh1DG321900 Rh2DG217200 Rh3AG000700 Rh3BG000500 Rh3CG000500 Rh3DG000700 Rh7AG341600 Rh7CG359500 |
| rosa_wichuraiana | Rw1G029170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 165 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 92 |
| AccB1I | GGYRCC | 3 cut(s) | 1055, 1429, 1888 |
| AccI | GTMKAC | 1 cut(s) | 906 |
| AciI | CCGC | 3 cut(s) | 49, 145, 387 |
| AclI | AACGTT | 1 cut(s) | 1733 |
| AclWI | GGATC | 4 cut(s) | 368, 449, 573, 1179 |
| AcoI | YGGCCR | 2 cut(s) | 18, 106 |
| AcsI | RAATTY | 5 cut(s) | 738, 940, 1545, 1958, 2009 |
| AcuI | CTGAAG | 8 cut(s) | 141, 611, 711, 968, 1127, 1298, 1490, 1950 |
| AfaI | GTAC | 1 cut(s) | 1415 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 383, 651, 1725, 1904 |
| AflII | CTTAAG | 1 cut(s) | 263 |
| AgeI | ACCGGT | 1 cut(s) | 1031 |
| AgsI | TTSAA | 9 cut(s) | 464, 520, 585, 658, 799, 945, 1399, 1715, 1839 |
| AjiI | CACGTC | 1 cut(s) | 1281 |
| AjnI | CCWGG | 3 cut(s) | 495, 1483, 1626 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1944, 1976 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 519, 551 |
| Alw21I | GWGCWC | 1 cut(s) | 1322 |
| Alw26I | GTCTC | 5 cut(s) | 214, 767, 853, 1512, 1568 |
| AlwI | GGATC | 4 cut(s) | 368, 449, 573, 1179 |
| Ama87I | CYCGRG | 1 cut(s) | 1537 |
| AoxI | GGCC | 5 cut(s) | 18, 106, 508, 1392, 1727 |
| ApeKI | GCWGC | 6 cut(s) | 10, 203, 1130, 1133, 1705, 1901 |
| ApoI | RAATTY | 5 cut(s) | 738, 940, 1545, 1958, 2009 |
| AseI | ATTAAT | 2 cut(s) | 663, 1287 |
| AsiGI | ACCGGT | 1 cut(s) | 1031 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 624, 843 |
| AspS9I | GGNCC | 1 cut(s) | 1481 |
| AsuHPI | GGTGA | 9 cut(s) | 401, 873, 887, 1027, 1046, 1193, 1199, 1746, 1788 |
| AvaI | CYCGRG | 1 cut(s) | 1537 |
| AvaII | GGWCC | 1 cut(s) | 1481 |
| AxyI | CCTNAGG | 1 cut(s) | 1884 |
| BalI | TGGCCA | 1 cut(s) | 108 |
| BanI | GGYRCC | 3 cut(s) | 1055, 1429, 1888 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1753, 1785 |
| BauI | CACGAG | 2 cut(s) | 1008, 1974 |
| BbsI | GAAGAC | 2 cut(s) | 762, 836 |
| Bbv12I | GWGCWC | 1 cut(s) | 1322 |
| BbvI | GCAGC | 5 cut(s) | 190, 1117, 1120, 1717, 1913 |
| BccI | CCATC | 5 cut(s) | 243, 653, 1759, 1994, 1998 |
| BceAI | ACGGC | 3 cut(s) | 5, 33, 98 |
| BciT130I | CCWGG | 3 cut(s) | 497, 1485, 1628 |
| BciVI | GTATCC | 1 cut(s) | 1294 |
| BcoDI | GTCTC | 5 cut(s) | 214, 767, 853, 1512, 1568 |
| BfaI | CTAG | 4 cut(s) | 246, 1758, 1815, 1940 |
| BfmI | CTRYAG | 5 cut(s) | 204, 573, 1899, 1986, 2033 |
| BfrI | CTTAAG | 1 cut(s) | 263 |
| BfuI | GTATCC | 1 cut(s) | 1294 |
| BisI | GCNGC | 6 cut(s) | 11, 204, 1131, 1134, 1706, 1902 |
| BlpI | GCTNAGC | 1 cut(s) | 1871 |
| BlsI | GCNGC | 6 cut(s) | 12, 205, 1132, 1135, 1707, 1903 |
| Bme1390I | CCNGG | 3 cut(s) | 497, 1485, 1628 |
| Bme18I | GGWCC | 1 cut(s) | 1481 |
| BmeT110I | CYCGRG | 1 cut(s) | 1537 |
| BmgBI | CACGTC | 1 cut(s) | 1281 |
| BmgT120I | GGNCC | 1 cut(s) | 1481 |
| BmiI | GGNNCC | 6 cut(s) | 127, 1057, 1431, 1482, 1890, 1909 |
| BmrFI | CCNGG | 3 cut(s) | 497, 1485, 1628 |
| BmsI | GCATC | 2 cut(s) | 532, 676 |
| BpiI | GAAGAC | 2 cut(s) | 762, 836 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1864, 1896 |
| BpmI | CTGGAG | 4 cut(s) | 455, 518, 814, 1571 |
| Bpu10I | CCTNAGC | 1 cut(s) | 914 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1871 |
| BpuEI | CTTGAG | 3 cut(s) | 1094, 1122, 1316 |
| BsaI | GGTCTC | 1 cut(s) | 1568 |
| BsaJI | CCNNGG | 2 cut(s) | 1484, 1538 |
| BsaWI | WCCGGW | 1 cut(s) | 1031 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1544, 1574 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 383, 651, 1725, 1904 |
| Bse118I | RCCGGY | 2 cut(s) | 1031, 1662 |
| Bse1I | ACTGG | 3 cut(s) | 1650, 1911, 2025 |
| Bse21I | CCTNAGG | 1 cut(s) | 1884 |
| Bse3DI | GCAATG | 2 cut(s) | 233, 877 |
| BseBI | CCWGG | 3 cut(s) | 497, 1485, 1628 |
| BseDI | CCNNGG | 2 cut(s) | 1484, 1538 |
| BseGI | GGATG | 4 cut(s) | 601, 1228, 1393, 2009 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 383, 651, 1725, 1904 |
| BseMI | GCAATG | 2 cut(s) | 233, 877 |
| BseMII | CTCAG | 6 cut(s) | 668, 911, 928, 1862, 1865, 1898 |
| BseNI | ACTGG | 3 cut(s) | 1650, 1911, 2025 |
| BseRI | GAGGAG | 4 cut(s) | 1178, 1568, 1571, 1872 |
| BseX3I | CGGCCG | 1 cut(s) | 18 |
| BseXI | GCAGC | 5 cut(s) | 190, 1117, 1120, 1717, 1913 |
| Bsh1285I | CGRYCG | 2 cut(s) | 21, 1663 |
| BshFI | GGCC | 5 cut(s) | 20, 108, 510, 1394, 1729 |
| BshNI | GGYRCC | 3 cut(s) | 1055, 1429, 1888 |
| BshTI | ACCGGT | 1 cut(s) | 1031 |
| BsiEI | CGRYCG | 2 cut(s) | 21, 1663 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1322 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1537 |
| BsiSI | CCGG | 2 cut(s) | 1032, 1663 |
| BslFI | GGGAC | 1 cut(s) | 1759 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 383, 651, 1725, 1904 |
| BsmAI | GTCTC | 5 cut(s) | 214, 767, 853, 1512, 1568 |
| BsmFI | GGGAC | 1 cut(s) | 1759 |
| BsmI | GAATGC | 2 cut(s) | 733, 1837 |
| BsnI | GGCC | 5 cut(s) | 20, 108, 510, 1394, 1729 |
| Bso31I | GGTCTC | 1 cut(s) | 1568 |
| BsoBI | CYCGRG | 1 cut(s) | 1537 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1322 |
| Bsp1407I | TGTACA | 1 cut(s) | 1413 |
| Bsp143I | GATC | 7 cut(s) | 373, 441, 565, 1102, 1171, 1510, 1581 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1871 |
| BspACI | CCGC | 3 cut(s) | 49, 145, 387 |
| BspANI | GGCC | 5 cut(s) | 20, 108, 510, 1394, 1729 |
| BspCNI | CTCAG | 6 cut(s) | 669, 910, 927, 1863, 1864, 1897 |
| BspHI | TCATGA | 1 cut(s) | 538 |
| BspLI | GGNNCC | 6 cut(s) | 127, 1057, 1431, 1482, 1890, 1909 |
| BspMAI | CTGCAG | 4 cut(s) | 208, 1903, 1990, 2037 |
| BspPI | GGATC | 4 cut(s) | 368, 449, 573, 1179 |
| BspT107I | GGYRCC | 3 cut(s) | 1055, 1429, 1888 |
| BspTI | CTTAAG | 1 cut(s) | 263 |
| BspTNI | GGTCTC | 1 cut(s) | 1568 |
| BsrDI | GCAATG | 2 cut(s) | 233, 877 |
| BsrFI | RCCGGY | 2 cut(s) | 1031, 1662 |
| BsrGI | TGTACA | 1 cut(s) | 1413 |
| BsrI | ACTGG | 3 cut(s) | 1650, 1911, 2025 |
| BssAI | RCCGGY | 2 cut(s) | 1031, 1662 |
| BssECI | CCNNGG | 2 cut(s) | 1484, 1538 |
| BssMI | GATC | 7 cut(s) | 373, 441, 565, 1102, 1171, 1510, 1581 |
| BssSI | CACGAG | 2 cut(s) | 1008, 1974 |
| Bst2BI | CACGAG | 2 cut(s) | 1008, 1974 |
| Bst2UI | CCWGG | 3 cut(s) | 497, 1485, 1628 |
| Bst4CI | ACNGT | 3 cut(s) | 70, 290, 577 |
| Bst6I | CTCTTC | 1 cut(s) | 1103 |
| BstAFI | CTTAAG | 1 cut(s) | 263 |
| BstAUI | TGTACA | 1 cut(s) | 1413 |
| BstC8I | GCNNGC | 2 cut(s) | 102, 106 |
| BstDEI | CTNAG | 8 cut(s) | 254, 677, 866, 897, 914, 1851, 1871, 1884 |
| BstF5I | GGATG | 4 cut(s) | 601, 1228, 1393, 2009 |
| BstKTI | GATC | 7 cut(s) | 376, 444, 568, 1105, 1174, 1513, 1584 |
| BstMAI | GTCTC | 5 cut(s) | 214, 767, 853, 1512, 1568 |
| BstMBI | GATC | 7 cut(s) | 373, 441, 565, 1102, 1171, 1510, 1581 |
| BstMCI | CGRYCG | 2 cut(s) | 21, 1663 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 110, 125, 259, 641, 1004, 1064, 1139, 1824, 1940 |
| BstNI | CCWGG | 3 cut(s) | 497, 1485, 1628 |
| BstNSI | RCATGY | 1 cut(s) | 896 |
| BstSCI | CCNGG | 3 cut(s) | 495, 1483, 1626 |
| BstSFI | CTRYAG | 5 cut(s) | 204, 573, 1899, 1986, 2033 |
| BstV1I | GCAGC | 5 cut(s) | 190, 1117, 1120, 1717, 1913 |
| BstV2I | GAAGAC | 2 cut(s) | 762, 836 |
| BstX2I | RGATCY | 1 cut(s) | 565 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 104 |
| BstYI | RGATCY | 1 cut(s) | 565 |
| BstZI | CGGCCG | 1 cut(s) | 18 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1884 |
| BsuI | GTATCC | 1 cut(s) | 1294 |
| BsuRI | GGCC | 5 cut(s) | 20, 108, 510, 1394, 1729 |
| BtrI | CACGTC | 1 cut(s) | 1281 |
| BtsCI | GGATG | 4 cut(s) | 601, 1228, 1393, 2009 |
| BtsI | GCAGTG | 2 cut(s) | 1771, 1792 |
| BtsIMutI | CAGTG | 3 cut(s) | 1322, 1771, 1792 |
| Cac8I | GCNNGC | 2 cut(s) | 102, 106 |
| CciI | TCATGA | 1 cut(s) | 538 |
| Cfr10I | RCCGGY | 2 cut(s) | 1031, 1662 |
| Cfr13I | GGNCC | 1 cut(s) | 1481 |
| Csp6I | GTAC | 1 cut(s) | 1414 |
| CspAI | ACCGGT | 1 cut(s) | 1031 |
| CviAII | CATG | 8 cut(s) | 454, 473, 539, 893, 1305, 1370, 1690, 1828 |
| CviQI | GTAC | 1 cut(s) | 1414 |
| DdeI | CTNAG | 8 cut(s) | 254, 677, 866, 897, 914, 1851, 1871, 1884 |
| DpnI | GATC | 7 cut(s) | 375, 443, 567, 1104, 1173, 1512, 1583 |
| DpnII | GATC | 7 cut(s) | 373, 441, 565, 1102, 1171, 1510, 1581 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 92 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 92 |
| EaeI | YGGCCR | 2 cut(s) | 18, 106 |
| EagI | CGGCCG | 1 cut(s) | 18 |
| Eam1104I | CTCTTC | 1 cut(s) | 1103 |
| EarI | CTCTTC | 1 cut(s) | 1103 |
| EclXI | CGGCCG | 1 cut(s) | 18 |
| Eco31I | GGTCTC | 1 cut(s) | 1568 |
| Eco47I | GGWCC | 1 cut(s) | 1481 |
| Eco52I | CGGCCG | 1 cut(s) | 18 |
| Eco57I | CTGAAG | 8 cut(s) | 141, 611, 711, 968, 1127, 1298, 1490, 1950 |
| Eco81I | CCTNAGG | 1 cut(s) | 1884 |
| Eco88I | CYCGRG | 1 cut(s) | 1537 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1481 |
| EcoRI | GAATTC | 1 cut(s) | 2009 |
| EcoRII | CCWGG | 3 cut(s) | 495, 1483, 1626 |
| FaeI | CATG | 8 cut(s) | 457, 476, 542, 896, 1308, 1373, 1693, 1831 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 792, 824 |
| FaqI | GGGAC | 1 cut(s) | 1759 |
| FatI | CATG | 8 cut(s) | 453, 472, 538, 892, 1304, 1369, 1689, 1827 |
| FblI | GTMKAC | 1 cut(s) | 906 |
| Fnu4HI | GCNGC | 6 cut(s) | 11, 204, 1131, 1134, 1706, 1902 |
| FokI | GGATG | 4 cut(s) | 608, 1235, 1400, 2016 |
| Fsp4HI | GCNGC | 6 cut(s) | 11, 204, 1131, 1134, 1706, 1902 |
| FspBI | CTAG | 4 cut(s) | 246, 1758, 1815, 1940 |
| GluI | GCNGC | 6 cut(s) | 11, 204, 1131, 1134, 1706, 1902 |
| GsuI | CTGGAG | 4 cut(s) | 455, 518, 814, 1571 |
| HaeIII | GGCC | 5 cut(s) | 20, 108, 510, 1394, 1729 |
| HapII | CCGG | 2 cut(s) | 1032, 1663 |
| Hin1II | CATG | 8 cut(s) | 457, 476, 542, 896, 1308, 1373, 1693, 1831 |
| HincII | GTYRAC | 1 cut(s) | 907 |
| HindII | GTYRAC | 1 cut(s) | 907 |
| HindIII | AAGCTT | 1 cut(s) | 693 |
| HpaII | CCGG | 2 cut(s) | 1032, 1663 |
| HphI | GGTGA | 9 cut(s) | 401, 873, 887, 1027, 1046, 1193, 1199, 1746, 1788 |
| Hpy166II | GTNNAC | 3 cut(s) | 907, 1414, 1606 |
| Hpy8I | GTNNAC | 3 cut(s) | 907, 1414, 1606 |
| Hpy99I | CGWCG | 2 cut(s) | 95, 119 |
| HpyAV | CCTTC | 5 cut(s) | 116, 833, 1213, 1330, 1414 |
| HpyCH4III | ACNGT | 3 cut(s) | 70, 290, 577 |
| HpyCH4IV | ACGT | 5 cut(s) | 352, 1280, 1611, 1733, 1772 |
| HpyCH4V | TGCA | 9 cut(s) | 206, 421, 562, 812, 1067, 1508, 1901, 1988, 2035 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 110, 125, 259, 641, 1004, 1064, 1139, 1824, 1940 |
| HpyF3I | CTNAG | 8 cut(s) | 254, 677, 866, 897, 914, 1851, 1871, 1884 |
| HpySE526I | ACGT | 5 cut(s) | 352, 1280, 1611, 1733, 1772 |
| Hsp92II | CATG | 8 cut(s) | 457, 476, 542, 896, 1308, 1373, 1693, 1831 |
| Kzo9I | GATC | 7 cut(s) | 373, 441, 565, 1102, 1171, 1510, 1581 |
| LmnI | GCTCC | 2 cut(s) | 125, 833 |
| Lsp1109I | GCAGC | 5 cut(s) | 190, 1117, 1120, 1717, 1913 |
| LweI | GCATC | 2 cut(s) | 532, 676 |
| MaeI | CTAG | 4 cut(s) | 246, 1758, 1815, 1940 |
| MaeII | ACGT | 5 cut(s) | 352, 1280, 1611, 1733, 1772 |
| MaeIII | GTNAC | 3 cut(s) | 587, 875, 1768 |
| MalI | GATC | 7 cut(s) | 375, 443, 567, 1104, 1173, 1512, 1583 |
| MboI | GATC | 7 cut(s) | 373, 441, 565, 1102, 1171, 1510, 1581 |
| MboII | GAAGA | 9 cut(s) | 209, 491, 670, 767, 836, 1120, 1304, 1385, 1483 |
| MfeI | CAATTG | 1 cut(s) | 308 |
| MflI | RGATCY | 1 cut(s) | 565 |
| MhlI | GDGCHC | 1 cut(s) | 1322 |
| MlsI | TGGCCA | 1 cut(s) | 108 |
| MluNI | TGGCCA | 1 cut(s) | 108 |
| MlyI | GAGTC | 3 cut(s) | 80, 769, 872 |
| MmeI | TCCRAC | 2 cut(s) | 22, 1470 |
| Mox20I | TGGCCA | 1 cut(s) | 108 |
| MroXI | GAANNNNTTC | 2 cut(s) | 624, 843 |
| MscI | TGGCCA | 1 cut(s) | 108 |
| MseI | TTAA | 8 cut(s) | 264, 399, 609, 663, 782, 1287, 1436, 1923 |
| Msp20I | TGGCCA | 1 cut(s) | 108 |
| MspA1I | CMGCKG | 1 cut(s) | 1904 |
| MspCI | CTTAAG | 1 cut(s) | 263 |
| MspI | CCGG | 2 cut(s) | 1032, 1663 |
| MspR9I | CCNGG | 3 cut(s) | 497, 1485, 1628 |
| MunI | CAATTG | 1 cut(s) | 308 |
| Mva1269I | GAATGC | 2 cut(s) | 733, 1837 |
| MvaI | CCWGG | 3 cut(s) | 497, 1485, 1628 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 110, 125, 259, 641, 1004, 1064, 1139, 1824, 1940 |
| NdeII | GATC | 7 cut(s) | 373, 441, 565, 1102, 1171, 1510, 1581 |
| NlaIII | CATG | 8 cut(s) | 457, 476, 542, 896, 1308, 1373, 1693, 1831 |
| NlaIV | GGNNCC | 6 cut(s) | 127, 1057, 1431, 1482, 1890, 1909 |
| NmeAIII | GCCGAG | 2 cut(s) | 982, 1969 |
| NmuCI | GTSAC | 1 cut(s) | 875 |
| NspI | RCATGY | 1 cut(s) | 896 |
| PagI | TCATGA | 1 cut(s) | 538 |
| PctI | GAATGC | 2 cut(s) | 733, 1837 |
| PdmI | GAANNNNTTC | 2 cut(s) | 624, 843 |
| PfeI | GAWTC | 7 cut(s) | 817, 929, 1474, 1715, 1747, 1844, 1952 |
| PflFI | GACNNNGTC | 1 cut(s) | 89 |
| PfoI | TCCNGGA | 1 cut(s) | 495 |
| PinAI | ACCGGT | 1 cut(s) | 1031 |
| PkrI | GCNGC | 6 cut(s) | 12, 205, 1132, 1135, 1707, 1903 |
| PleI | GAGTC | 3 cut(s) | 80, 769, 872 |
| PpsI | GAGTC | 3 cut(s) | 80, 769, 872 |
| PpuMI | RGGWCCY | 1 cut(s) | 1481 |
| PshBI | ATTAAT | 2 cut(s) | 663, 1287 |
| PsiI | TTATAA | 1 cut(s) | 165 |
| Psp1406I | AACGTT | 1 cut(s) | 1733 |
| Psp5II | RGGWCCY | 1 cut(s) | 1481 |
| Psp6I | CCWGG | 3 cut(s) | 495, 1483, 1626 |
| PspGI | CCWGG | 3 cut(s) | 495, 1483, 1626 |
| PspN4I | GGNNCC | 6 cut(s) | 127, 1057, 1431, 1482, 1890, 1909 |
| PspPI | GGNCC | 1 cut(s) | 1481 |
| PspPPI | RGGWCCY | 1 cut(s) | 1481 |
| PstI | CTGCAG | 4 cut(s) | 208, 1903, 1990, 2037 |
| PsuI | RGATCY | 1 cut(s) | 565 |
| PsyI | GACNNNGTC | 1 cut(s) | 89 |
| PvuII | CAGCTG | 1 cut(s) | 1904 |
| RsaI | GTAC | 1 cut(s) | 1415 |
| RsaNI | GTAC | 1 cut(s) | 1414 |
| SalI | GTCGAC | 1 cut(s) | 905 |
| SaqAI | TTAA | 8 cut(s) | 264, 399, 609, 663, 782, 1287, 1436, 1923 |
| SatI | GCNGC | 6 cut(s) | 11, 204, 1131, 1134, 1706, 1902 |
| Sau3AI | GATC | 7 cut(s) | 373, 441, 565, 1102, 1171, 1510, 1581 |
| Sau96I | GGNCC | 1 cut(s) | 1481 |
| SchI | GAGTC | 3 cut(s) | 80, 769, 872 |
| ScrFI | CCNGG | 3 cut(s) | 497, 1485, 1628 |
| SduI | GDGCHC | 1 cut(s) | 1322 |
| SfaNI | GCATC | 2 cut(s) | 532, 676 |
| SfcI | CTRYAG | 5 cut(s) | 204, 573, 1899, 1986, 2033 |
| SinI | GGWCC | 1 cut(s) | 1481 |
| SmlI | CTYRAG | 4 cut(s) | 263, 1073, 1137, 1295 |
| SmoI | CTYRAG | 4 cut(s) | 263, 1073, 1137, 1295 |
| SsiI | CCGC | 3 cut(s) | 49, 145, 387 |
| SspMI | CTAG | 4 cut(s) | 246, 1758, 1815, 1940 |
| StyD4I | CCNGG | 3 cut(s) | 495, 1483, 1626 |
| TaaI | ACNGT | 3 cut(s) | 70, 290, 577 |
| TaiI | ACGT | 5 cut(s) | 355, 1283, 1614, 1736, 1775 |
| TaqI | TCGA | 4 cut(s) | 717, 906, 1329, 2013 |
| TatI | WGTACW | 1 cut(s) | 1413 |
| TfiI | GAWTC | 7 cut(s) | 817, 929, 1474, 1715, 1747, 1844, 1952 |
| Tru1I | TTAA | 8 cut(s) | 264, 399, 609, 663, 782, 1287, 1436, 1923 |
| Tru9I | TTAA | 8 cut(s) | 264, 399, 609, 663, 782, 1287, 1436, 1923 |
| TscAI | CASTG | 3 cut(s) | 1322, 1771, 1792 |
| TseFI | GTSAC | 1 cut(s) | 875 |
| TseI | GCWGC | 6 cut(s) | 10, 203, 1130, 1133, 1705, 1901 |
| Tsp45I | GTSAC | 1 cut(s) | 875 |
| TspDTI | ATGAA | 9 cut(s) | 164, 354, 527, 612, 740, 1041, 1386, 1844, 2031 |
| TspGWI | ACGGA | 2 cut(s) | 79, 395 |
| TspRI | CASTG | 3 cut(s) | 1322, 1771, 1792 |
| Tth111I | GACNNNGTC | 1 cut(s) | 89 |
| Vha464I | CTTAAG | 1 cut(s) | 263 |
| VpaK11BI | GGWCC | 1 cut(s) | 1481 |
| VspI | ATTAAT | 2 cut(s) | 663, 1287 |
| XapI | RAATTY | 5 cut(s) | 738, 940, 1545, 1958, 2009 |
| XceI | RCATGY | 1 cut(s) | 896 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 146 |
| XmiI | GTMKAC | 1 cut(s) | 906 |
| XmnI | GAANNNNTTC | 2 cut(s) | 624, 843 |
| XspI | CTAG | 4 cut(s) | 246, 1758, 1815, 1940 |