Rh7CG359500

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
44589606 .. 44612578
22973 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG359500.1

Sequence Viewer

Length: 1581 bp
ATGGAAAAAAGCAGCGAAACAAATGGTCAACAACAGATCCAAAGAAGCCAGCCGATCTCGGCCTTGCTGCTGTGGGGGCTTGTGCAACTGGTACGCCATACACAGGATCTGGAACCGGAACCGTATATTGCTGATAAGTTGCAGGAGCAGAACTTTCTTGTTTGCTTGGAACTAGAAGTGGATGATAGGCTAGCTCTGGAGCAGGACGCTGAAGTTCAGGCGCCAGAAGATTGTCAATCTCATGGGTATGCTCAATATAATCCATCCATGGTGGTAAAGCGAGAGGAATTGCTTCAATTTGCACAAAGAGCAATTACAGGATTGAAGATAAGTACTGATCTTGGAAGAATAGATGATGAGGCCTCTAGGTTAAAGAAGAAGCTTGATGGAAGGACACCACTGCTGACGTCTCCTTCAACTGAAGGTCATGACAAAGTATCGGAAGAAACAAAATTGGAAACAGTACAGGTTGACAAATTGAAGGTTCTATCAGAATTTCTTGCTAGCTCCTCTGCAAAAGCTGAAAATCGTATTGCAGATAACAGAATCCAAAAGGAGGAAGCTCTAAAAGTTCGTGTGTCTAAAACTAGTGAAGTGGGTGAAAGAGAGAAGGAAATAGAAGTTGAGGTTGCAGAGCTTGAAAGACAAAGGGCTGATCTTGAGGCTCAATTGAAAAAGGTCAATATCTCCTTGGCTGCAGCTAATTCTCGCCGTCGCAATACCAGGGAAGACAGGGACCAATTTGAGGAAGCTAATACCAAGATTGTGGCTCACTTGGAAACCAAGGAAGATGAACTATCAAAATCCATTGCTTCATGTAAGGTCGAGGCAGATGTTCTACATACATGGATTAATTTTTTGGAAGATACTTGGGTACTCAAGTGCTCATATGCAGAGACCAATGATGAATTGGAGAAACATGAGCACTATTTTGTGAACTTCGCCATTGATCTTCTCTCTGCCTACAAGAAAGAGTTGGGGCCGTCTATCAGCCGTATAGGGAAATTTGTGGAGAATCTTAAGAATTTGAGCAAGAAGTCAGGGGTGGTATCTAATGCAGAGAATGAGGATTCTAAAGCATTAAATCTATTAAGAAGCCTTGAGGGGGAATATTTGGATCATGAAACCAAGATTATTACCACCTTCAGTGTAGTTGGTAATATGAAAGCGCACTTTTATTCAGAACAGGCTAGAACTTCCAGGAAAGAAGACCCAAGGGTTAAGGAACTGTTTGATGATATTGAAAAATTAAGAGCACAATTTGAAGCTGTTGAGAGACCAATTCTAGAAATAGAGACTCCAATTCCCCAAGCTGAAACTCCGTCTGATGACAAGCTGCAGAGTGCTCCATCTGATCTCTCAGCAGAGGGCTCAGTTGCACGGAAAGCTGAGACAGTGAGGCATTCGGAGTCGGGTGCAGTCAAGGTAGAGCAAGTGCTCGACCCTGAAGTTGACCTAGCAAAGCTCGAATCAGAGTTTGGCAAGGTTGGTCAAGACTACTCAACAGAGGAGGTGGGTGAGTGGGAATTTGACGAACTTGAGAGGGAACTAAGATCTGGTGATTCATCAAATACCAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

526

Amino Acids

59.54

Weight (kDa)

4.86

Isoelectric Point (pI)

38.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 410
AccB1I GGYRCC 1 cut(s) 220
AclWI GGATC 3 cut(s) 31, 114, 1125
AcsI RAATTY 4 cut(s) 494, 1004, 1024, 1526
AcuI CTGAAG 4 cut(s) 231, 441, 1129, 1467
AcyI GRCGYC 2 cut(s) 221, 407
AfaI GTAC 4 cut(s) 93, 334, 465, 876
AfiI CCNNNNNNNGG 4 cut(s) 103, 556, 745, 1105
AflII CTTAAG 1 cut(s) 1019
AgsI TTSAA 8 cut(s) 296, 325, 417, 481, 641, 673, 1244, 1265
AhlI ACTAGT 1 cut(s) 587
AjnI CCWGG 2 cut(s) 722, 1199
AjuI GAANNNNNNNTTGG 2 cut(s) 1461, 1493
Alw21I GWGCWC 5 cut(s) 887, 927, 1258, 1348, 1440
Alw26I GTCTC 5 cut(s) 414, 890, 1270, 1289, 1385
AlwI GGATC 3 cut(s) 31, 114, 1125
AlwNI CAGNNNCTG 1 cut(s) 109
AoxI GGCC 3 cut(s) 60, 360, 980
ApeKI GCWGC 5 cut(s) 12, 67, 695, 698, 1336
ApoI RAATTY 4 cut(s) 494, 1004, 1024, 1526
AseI ATTAAT 1 cut(s) 852
Asp700I GAANNNNTTC 1 cut(s) 291
AspLEI GCGC 2 cut(s) 223, 1171
AspS9I GGNCC 2 cut(s) 736, 980
AsuHPI GGTGA 3 cut(s) 611, 1529, 1571
AsuNHI GCTAGC 2 cut(s) 190, 503
AvaII GGWCC 1 cut(s) 736
BaeI ACNNNNGTAYC 4 cut(s) 858, 866, 891, 899
BanI GGYRCC 1 cut(s) 220
BanII GRGCYC 1 cut(s) 1373
BbsI GAAGAC 2 cut(s) 735, 1215
Bbv12I GWGCWC 5 cut(s) 887, 927, 1258, 1348, 1440
BbvI GCAGC 5 cut(s) 24, 54, 682, 710, 1323
BccI CCATC 3 cut(s) 271, 380, 1357
BceAI ACGGC 3 cut(s) 696, 967, 978
BciT130I CCWGG 2 cut(s) 724, 1201
BcoDI GTCTC 5 cut(s) 414, 890, 1270, 1289, 1385
BcuI ACTAGT 1 cut(s) 587
BfaI CTAG 8 cut(s) 173, 191, 366, 504, 588, 1191, 1286, 1457
BfmI CTRYAG 2 cut(s) 696, 1337
BfoI RGCGCY 1 cut(s) 224
BfrI CTTAAG 1 cut(s) 1019
BglII AGATCT 1 cut(s) 1553
BisI GCNGC 5 cut(s) 13, 68, 696, 699, 1337
BlsI GCNGC 5 cut(s) 14, 69, 697, 700, 1338
BmcAI AGTACT 1 cut(s) 334
Bme1390I CCNGG 2 cut(s) 724, 1201
Bme18I GGWCC 1 cut(s) 736
BmgT120I GGNCC 2 cut(s) 736, 980
BmiI GGNNCC 5 cut(s) 114, 120, 222, 737, 981
BmrFI CCNGG 2 cut(s) 724, 1201
BmtI GCTAGC 2 cut(s) 194, 507
BpiI GAAGAC 2 cut(s) 735, 1215
BpmI CTGGAG 1 cut(s) 218
BpuEI CTTGAG 4 cut(s) 680, 863, 1121, 1559
BsaHI GRCGYC 2 cut(s) 221, 407
BsaI GGTCTC 2 cut(s) 890, 1270
BsaJI CCNNGG 5 cut(s) 267, 690, 723, 783, 1214
BsaWI WCCGGW 1 cut(s) 115
Bsc4I CCNNNNNNNGG 4 cut(s) 103, 556, 745, 1105
Bse1I ACTGG 1 cut(s) 93
Bse3DI GCAATG 1 cut(s) 807
BseBI CCWGG 2 cut(s) 724, 1201
BseDI CCNNGG 5 cut(s) 267, 690, 723, 783, 1214
BseGI GGATG 2 cut(s) 187, 263
BseLI CCNNNNNNNGG 4 cut(s) 103, 556, 745, 1105
BseMI GCAATG 1 cut(s) 807
BseMII CTCAG 3 cut(s) 1374, 1380, 1386
BseNI ACTGG 1 cut(s) 93
BseRI GAGGAG 2 cut(s) 499, 1523
BseXI GCAGC 5 cut(s) 24, 54, 682, 710, 1323
BsgI GTGCAG 1 cut(s) 1437
BshFI GGCC 3 cut(s) 62, 362, 982
BshNI GGYRCC 1 cut(s) 220
BsiHKAI GWGCWC 5 cut(s) 887, 927, 1258, 1348, 1440
BsiSI CCGG 1 cut(s) 116
BslFI GGGAC 1 cut(s) 749
BslI CCNNNNNNNGG 4 cut(s) 103, 556, 745, 1105
BsmAI GTCTC 5 cut(s) 414, 890, 1270, 1289, 1385
BsmBI CGTCTC 1 cut(s) 414
BsmFI GGGAC 1 cut(s) 749
BsmI GAATGC 1 cut(s) 1402
BsnI GGCC 3 cut(s) 62, 362, 982
Bso31I GGTCTC 2 cut(s) 890, 1270
Bsp1286I GDGCHC 6 cut(s) 887, 927, 1258, 1348, 1373, 1440
Bsp143I GATC 9 cut(s) 36, 54, 106, 337, 655, 949, 1117, 1354, 1553
Bsp19I CCATGG 1 cut(s) 267
BspANI GGCC 3 cut(s) 62, 362, 982
BspCNI CTCAG 3 cut(s) 1373, 1381, 1385
BspHI TCATGA 2 cut(s) 427, 1120
BspLI GGNNCC 5 cut(s) 114, 120, 222, 737, 981
BspMAI CTGCAG 2 cut(s) 700, 1341
BspOI GCTAGC 2 cut(s) 194, 507
BspPI GGATC 3 cut(s) 31, 114, 1125
BspT107I GGYRCC 1 cut(s) 220
BspTI CTTAAG 1 cut(s) 1019
BspTNI GGTCTC 2 cut(s) 890, 1270
BsrDI GCAATG 1 cut(s) 807
BsrI ACTGG 1 cut(s) 93
BssECI CCNNGG 5 cut(s) 267, 690, 723, 783, 1214
BssMI GATC 9 cut(s) 36, 54, 106, 337, 655, 949, 1117, 1354, 1553
BssNI GRCGYC 2 cut(s) 221, 407
BssT1I CCWWGG 4 cut(s) 267, 690, 783, 1214
Bst2UI CCWGG 2 cut(s) 724, 1201
Bst4CI ACNGT 4 cut(s) 123, 463, 1230, 1396
BstACI GRCGYC 2 cut(s) 221, 407
BstAFI CTTAAG 1 cut(s) 1019
BstC8I GCNNGC 3 cut(s) 50, 192, 505
BstDEI CTNAG 4 cut(s) 1360, 1372, 1389, 1550
BstDSI CCRYGG 1 cut(s) 267
BstF5I GGATG 2 cut(s) 187, 263
BstH2I RGCGCY 1 cut(s) 224
BstHHI GCGC 2 cut(s) 223, 1171
BstKTI GATC 9 cut(s) 39, 57, 109, 340, 658, 952, 1120, 1357, 1556
BstMAI GTCTC 5 cut(s) 414, 890, 1270, 1289, 1385
BstMBI GATC 9 cut(s) 36, 54, 106, 337, 655, 949, 1117, 1354, 1553
BstMWI GCNNNNNNNGC 3 cut(s) 76, 308, 1385
BstNI CCWGG 2 cut(s) 724, 1201
BstSCI CCNGG 2 cut(s) 722, 1199
BstSFI CTRYAG 2 cut(s) 696, 1337
BstV1I GCAGC 5 cut(s) 24, 54, 682, 710, 1323
BstV2I GAAGAC 2 cut(s) 735, 1215
BstX2I RGATCY 3 cut(s) 36, 106, 1553
BstXI CCANNNNNNTGG 1 cut(s) 766
BstYI RGATCY 3 cut(s) 36, 106, 1553
BsuRI GGCC 3 cut(s) 62, 362, 982
BtgI CCRYGG 1 cut(s) 267
BtsCI GGATG 2 cut(s) 187, 263
BtsI GCAGTG 1 cut(s) 398
BtsIMutI CAGTG 3 cut(s) 398, 1153, 1401
Cac8I GCNNGC 3 cut(s) 50, 192, 505
CaiI CAGNNNCTG 1 cut(s) 109
CciI TCATGA 2 cut(s) 427, 1120
CfoI GCGC 2 cut(s) 223, 1171
Cfr13I GGNCC 2 cut(s) 736, 980
CseI GACGC 1 cut(s) 215
Csp6I GTAC 4 cut(s) 92, 333, 464, 875
CviAII CATG 7 cut(s) 242, 268, 428, 816, 846, 920, 1121
CviQI GTAC 4 cut(s) 92, 333, 464, 875
DdeI CTNAG 4 cut(s) 1360, 1372, 1389, 1550
DinI GGCGCC 1 cut(s) 222
DpnI GATC 9 cut(s) 38, 56, 108, 339, 657, 951, 1119, 1356, 1555
DpnII GATC 9 cut(s) 36, 54, 106, 337, 655, 949, 1117, 1354, 1553
Eco130I CCWWGG 4 cut(s) 267, 690, 783, 1214
Eco147I AGGCCT 1 cut(s) 362
Eco24I GRGCYC 1 cut(s) 1373
Eco31I GGTCTC 2 cut(s) 890, 1270
Eco47I GGWCC 1 cut(s) 736
Eco57I CTGAAG 4 cut(s) 231, 441, 1129, 1467
EcoRII CCWGG 2 cut(s) 722, 1199
EcoT14I CCWWGG 4 cut(s) 267, 690, 783, 1214
EcoT38I GRGCYC 1 cut(s) 1373
EgeI GGCGCC 1 cut(s) 222
EheI GGCGCC 1 cut(s) 222
ErhI CCWWGG 4 cut(s) 267, 690, 783, 1214
Esp3I CGTCTC 1 cut(s) 414
FaeI CATG 7 cut(s) 245, 271, 431, 819, 849, 923, 1124
FaqI GGGAC 1 cut(s) 749
FatI CATG 7 cut(s) 241, 267, 427, 815, 845, 919, 1120
FauNDI CATATG 1 cut(s) 889
Fnu4HI GCNGC 5 cut(s) 13, 68, 696, 699, 1337
FokI GGATG 2 cut(s) 194, 250
FriOI GRGCYC 1 cut(s) 1373
Fsp4HI GCNGC 5 cut(s) 13, 68, 696, 699, 1337
FspBI CTAG 8 cut(s) 173, 191, 366, 504, 588, 1191, 1286, 1457
GlaI GCGC 2 cut(s) 222, 1170
GluI GCNGC 5 cut(s) 13, 68, 696, 699, 1337
GsuI CTGGAG 1 cut(s) 218
HaeII RGCGCY 1 cut(s) 224
HaeIII GGCC 3 cut(s) 62, 362, 982
HapII CCGG 1 cut(s) 116
HgaI GACGC 1 cut(s) 215
HhaI GCGC 2 cut(s) 223, 1171
Hin1I GRCGYC 2 cut(s) 221, 407
Hin1II CATG 7 cut(s) 245, 271, 431, 819, 849, 923, 1124
Hin6I GCGC 2 cut(s) 221, 1169
HinP1I GCGC 2 cut(s) 221, 1169
HincII GTYRAC 3 cut(s) 29, 472, 1453
HindII GTYRAC 3 cut(s) 29, 472, 1453
HindIII AAGCTT 1 cut(s) 380
HinfI GANTC 7 cut(s) 546, 1015, 1070, 1297, 1409, 1469, 1562
HpaII CCGG 1 cut(s) 116
HphI GGTGA 3 cut(s) 611, 1529, 1571
Hpy166II GTNNAC 4 cut(s) 29, 472, 937, 1453
Hpy188I TCNGA 7 cut(s) 442, 493, 1183, 1327, 1354, 1408, 1474
Hpy188III TCNNGA 7 cut(s) 110, 197, 428, 659, 1121, 1286, 1493
Hpy8I GTNNAC 4 cut(s) 29, 472, 937, 1453
Hpy99I CGWCG 1 cut(s) 717
HpyAV CCTTC 6 cut(s) 384, 416, 423, 475, 604, 1153
HpyCH4III ACNGT 4 cut(s) 123, 463, 1230, 1396
HpyCH4IV ACGT 1 cut(s) 407
HpyF10VI GCNNNNNNNGC 3 cut(s) 76, 308, 1385
HpyF3I CTNAG 4 cut(s) 1360, 1372, 1389, 1550
HpySE526I ACGT 1 cut(s) 407
Hsp92I GRCGYC 2 cut(s) 221, 407
Hsp92II CATG 7 cut(s) 245, 271, 431, 819, 849, 923, 1124
HspAI GCGC 2 cut(s) 221, 1169
KasI GGCGCC 1 cut(s) 220
Kzo9I GATC 9 cut(s) 36, 54, 106, 337, 655, 949, 1117, 1354, 1553
LmnI GCTCC 4 cut(s) 145, 199, 512, 1351
Lsp1109I GCAGC 5 cut(s) 24, 54, 682, 710, 1323
MaeI CTAG 8 cut(s) 173, 191, 366, 504, 588, 1191, 1286, 1457
MaeII ACGT 1 cut(s) 407
MalI GATC 9 cut(s) 38, 56, 108, 339, 657, 951, 1119, 1356, 1555
MboI GATC 9 cut(s) 36, 54, 106, 337, 655, 949, 1117, 1354, 1553
MfeI CAATTG 1 cut(s) 668
MflI RGATCY 3 cut(s) 36, 106, 1553
MhlI GDGCHC 6 cut(s) 887, 927, 1258, 1348, 1373, 1440
Mly113I GGCGCC 1 cut(s) 221
MlyI GAGTC 2 cut(s) 1291, 1418
MroXI GAANNNNTTC 1 cut(s) 291
MseI TTAA 7 cut(s) 371, 852, 1020, 1082, 1091, 1221, 1250
MslI CAYNNNNRTG 1 cut(s) 246
MspCI CTTAAG 1 cut(s) 1019
MspI CCGG 1 cut(s) 116
MspR9I CCNGG 2 cut(s) 724, 1201
MunI CAATTG 1 cut(s) 668
Mva1269I GAATGC 1 cut(s) 1402
MvaI CCWGG 2 cut(s) 724, 1201
MwoI GCNNNNNNNGC 3 cut(s) 76, 308, 1385
NarI GGCGCC 1 cut(s) 221
NcoI CCATGG 1 cut(s) 267
NdeI CATATG 1 cut(s) 889
NdeII GATC 9 cut(s) 36, 54, 106, 337, 655, 949, 1117, 1354, 1553
NheI GCTAGC 2 cut(s) 190, 503
NlaIII CATG 7 cut(s) 245, 271, 431, 819, 849, 923, 1124
NlaIV GGNNCC 5 cut(s) 114, 120, 222, 737, 981
NmeAIII GCCGAG 1 cut(s) 38
PagI TCATGA 2 cut(s) 427, 1120
PceI AGGCCT 1 cut(s) 362
PctI GAATGC 1 cut(s) 1402
PdmI GAANNNNTTC 1 cut(s) 291
PfeI GAWTC 5 cut(s) 546, 1015, 1070, 1469, 1562
PfoI TCCNGGA 1 cut(s) 1199
PkrI GCNGC 5 cut(s) 14, 69, 697, 700, 1338
PleI GAGTC 2 cut(s) 1291, 1417
PluTI GGCGCC 1 cut(s) 224
PpsI GAGTC 2 cut(s) 1291, 1417
PshBI ATTAAT 1 cut(s) 852
Psp6I CCWGG 2 cut(s) 722, 1199
PspGI CCWGG 2 cut(s) 722, 1199
PspN4I GGNNCC 5 cut(s) 114, 120, 222, 737, 981
PspPI GGNCC 2 cut(s) 736, 980
PstI CTGCAG 2 cut(s) 700, 1341
PstNI CAGNNNCTG 1 cut(s) 109
PsuI RGATCY 3 cut(s) 36, 106, 1553
RsaI GTAC 4 cut(s) 93, 334, 465, 876
RsaNI GTAC 4 cut(s) 92, 333, 464, 875
RseI CAYNNNNRTG 1 cut(s) 246
SaqAI TTAA 7 cut(s) 371, 852, 1020, 1082, 1091, 1221, 1250
SatI GCNGC 5 cut(s) 13, 68, 696, 699, 1337
Sau3AI GATC 9 cut(s) 36, 54, 106, 337, 655, 949, 1117, 1354, 1553
Sau96I GGNCC 2 cut(s) 736, 980
ScaI AGTACT 1 cut(s) 334
SchI GAGTC 2 cut(s) 1291, 1418
ScrFI CCNGG 2 cut(s) 724, 1201
SduI GDGCHC 6 cut(s) 887, 927, 1258, 1348, 1373, 1440
SfcI CTRYAG 2 cut(s) 696, 1337
SfoI GGCGCC 1 cut(s) 222
SinI GGWCC 1 cut(s) 736
SmiMI CAYNNNNRTG 1 cut(s) 246
SmlI CTYRAG 5 cut(s) 659, 878, 1019, 1100, 1538
SmoI CTYRAG 5 cut(s) 659, 878, 1019, 1100, 1538
SpeI ACTAGT 1 cut(s) 587
SseBI AGGCCT 1 cut(s) 362
SspDI GGCGCC 1 cut(s) 220
SspI AATATT 1 cut(s) 1112
SspMI CTAG 8 cut(s) 173, 191, 366, 504, 588, 1191, 1286, 1457
StuI AGGCCT 1 cut(s) 362
StyD4I CCNGG 2 cut(s) 722, 1199
StyI CCWWGG 4 cut(s) 267, 690, 783, 1214
TaaI ACNGT 4 cut(s) 123, 463, 1230, 1396
TaiI ACGT 1 cut(s) 410
TaqI TCGA 3 cut(s) 825, 1440, 1467
TatI WGTACW 2 cut(s) 332, 463
TfiI GAWTC 5 cut(s) 546, 1015, 1070, 1469, 1562
Tru1I TTAA 7 cut(s) 371, 852, 1020, 1082, 1091, 1221, 1250
Tru9I TTAA 7 cut(s) 371, 852, 1020, 1082, 1091, 1221, 1250
TscAI CASTG 3 cut(s) 405, 1153, 1401
TseI GCWGC 5 cut(s) 12, 67, 695, 698, 1336
TspDTI ATGAA 6 cut(s) 804, 807, 921, 1137, 1178, 1554
TspGWI ACGGA 2 cut(s) 1311, 1396
TspRI CASTG 3 cut(s) 405, 1153, 1401
Vha464I CTTAAG 1 cut(s) 1019
VpaK11BI GGWCC 1 cut(s) 736
VspI ATTAAT 1 cut(s) 852
XapI RAATTY 4 cut(s) 494, 1004, 1024, 1526
XbaI TCTAGA 1 cut(s) 1285
XcmI CCANNNNNNNNNTGG 1 cut(s) 907
XmnI GAANNNNTTC 1 cut(s) 291
XspI CTAG 8 cut(s) 173, 191, 366, 504, 588, 1191, 1286, 1457
ZraI GACGTC 1 cut(s) 408
ZrmI AGTACT 1 cut(s) 334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.