Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0004609

Physical Location & Seq

Genomic Coordinates Reverse (-)

11853498 .. 11861456

Gene Structure 7959 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00291410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2091 bp

ATGTCGTGGCTGAGATCGGCGGTGAACAAAGCCGTGGAGGTTGGGCACAACAACAACCTCACTCGCACCGTCAGGAACTACGCCGATTCCGTCGTCCAGCAGGCCGGCCATGCCGTCGCTGAAGGCGCCAAGCGGTTTCAGGATCGGCTGGGGAATCGGAGCTTCCGGAGCGTTAAGAAGAGTGTACAGAGATTGGAGGAAGCAGCTGTGTCGTGTAGAGGACCTGAAAGGGCTGAGATACTGAGGAGGTGGGTGGTTCTGCTCAAAGAGGTGGAGAGACTGAAGCTGTCTCAGGCGGAAGAGAAGGAAAAGGCGGCGGAGCAGAGCAGTGGCGGTGGTGCTTCGGAGGATGTTAGTGATATTCGGAGGAAGATATCGACGGTTTTGTATTATGACTCTGATGTTGGTGGTGAGCCGATGAATTTCCGCGACGTTTTTCTTCTGAGTCAGGCTCTGGAGGGCATTACATTGTCTATGGTATGTGTTTCAATAATGAATGCTGCAAGTGTGCTTGAAATTAAATATGGCATTGCTGAGAAGGAAATGGGGATTCTTGAAGCACCAAATGATGAAGAGGTTGCCTTGCTCTCGGAGATGTTTAGGCTCTGTCTTACTGGAGGGAAAGAAGTTCACAATGCTATTGTAAGCAGCATACAGGACTTGGCAACAGCTTTTTCGAGCTACAACGATGAAGTATTGGTAAAGCGAGAGGAATTGCTTCAATTTGCACAGAGTGCAATTACAGGATTGAAGATAAATGCTGATCTTGGAAGAATAGATGATGAGGCCTCTAGGTTAAAGAAGAAGCTTGATGGAAGGACACCACTGCTGACGTCTCCTTCAACTGAAGGTCATGACAAAGTATCGGAAGAAACAAAATTGGAAACAGTACAGGCATTAAAAAAAGCACTTGCACAAATTCGAGCTTGTTCCAGATTAGAAGGGCTTTTACTGAAGAAGAAACTCTTGAACAGTGGAGATTCCTCAGAGATCCATGCTCAAAAAGTTGACAAATTGAAGGTTTTATCAGAATCTCTTGCTAGCTCCTCTGCAAAAGCGGAAAATCGTATTTCAGATAACAGAATCCAAAAGGAGGAAGCTCTAAAAGTTCGTGCGTCTAAAGCTAGTGAAGTGGGTGAAAGAGAGAAGGAAATAGAAGCCGAGGTTTCAGAGCTTGAAAGACAAAGGGATGATCTTGAGGCTCAATTGAAAAAGGTCAATATCTCCTTGGCTGCAGCTAATTCTCGCCTTCTTCGCAATACCAGGGAAGAGAGGGACCAATTTGAGGAAGCTAATACCAAGATTGTGGCTCACTTGGAAACAAAGGAAGATGAACTATCAAAATCCATTGCTTCATGTAAGGTTGAGGCAGATGTTCTACATACATGGATTAATTTTTGGAAGATACTTGGTGATGAATTGGAGAAACATGAGCACTATTTTGTGAACTTCGCCATTGATCTTCTCTCTGCCTACAAGAAAGAGTTGGGGCCTTCTATCAGCCGTATAGGGAAATTTGTGGAGAATCTTAAGAATTTGAGCAAGAAGTCAGGGGTGGTATCTAACGCAGAGAATGAGGATTCTAAGGCATTAAATCCATTAAGAAGTCTTGAGGAGGAATATTTGGATCATGAAACCAAGATTATTACCACCTTCAGTGTAGTTGATAATATGAAAGCGCACTTTTATTCAGAACAGGCTAGAACTTCCAGGAAAGAGGACCCAAGGGTTAAGGAGCTGTTCGATGATATTGAAAAACTAAGAGCACAATTTGAAGCTGTTGAGAGACCAATTCTAGAAATAGAGACTCCAATTCCCCAAGCTGGAACTCCGTCTGATGACAAGCTGCAGAGTGCTCCATCTGATCTCTCAGCAGAGGGTTCAGCTGCACAGAAAGCTGAGACAGTGAAGCATTCAAAGTCGGGTGCAGTCAAGGTAGAGCATGTGCTCGACCCTGAAGATGACCTAGCAAAGCTCGAATCAGAGTTTGGCAAGGTTGGTCAAGACTACTCAACAGAGGAGGTGGGTGAGTGGGAATTTGACGAGCTTGAGAGGGAACTAAGATCTGGTGATTCATCAACTACCAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

696

Amino Acids

77.63

Weight (kDa)

5.28

Isoelectric Point (pI)

43.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004609)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13560
fragaria_vesca	FvH4_7g20871 FvH4_7g20871
malus_domestica	MD07G1186500.v1.1 MD13G1157000.v1.1
prunus_persica	Prupe.2G225300_v2.0.a1
pyrus_communis	pycom01g14560 pycom07g17780
rosa_chinensis	RchiOBHm_Chr1g0365121 RchiOBHm_Chr7g0221351
rosa_laevigata	RLG00000014849 RLG00000027440 RLG00000028869
rosa_multiflora	Rmu_co8467635.1_g000001 Rmu_sc0001688.1_g000008
rosa_roxburghii	Rroxscaffold_4G00291410 Rroxscaffold_4G00291920
rosa_rugosa	Rorug01G0320000 Rorug01G0320100
rosa_samantha	Rh1AG328700 Rh1BG290300 Rh1CG307000 Rh1DG321900 Rh2DG217200 Rh3AG000700 Rh3BG000500 Rh3CG000500 Rh3DG000700 Rh7AG341600 Rh7CG359500
rosa_wichuraiana	Rw1G029170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	836
AccB1I	GGYRCC	1 cut(s)	125
AccII	CGCG	1 cut(s)	429
AccIII	TCCGGA	1 cut(s)	165
AciI	CCGC	8 cut(s)	20, 133, 296, 314, 317, 333, 427, 1058
AclWI	GGATC	3 cut(s)	150, 985, 1635
AcoI	YGGCCR	1 cut(s)	106
AcsI	RAATTY	5 cut(s)	421, 918, 1514, 1534, 2036
AcuI	CTGAAG	6 cut(s)	141, 302, 867, 974, 1639, 1977
AcyI	GRCGYC	2 cut(s)	126, 833
AdeI	CACNNNGTG	1 cut(s)	734
AfaI	GTAC	2 cut(s)	186, 891
AfiI	CCNNNNNNNGG	3 cut(s)	1093, 1285, 1823
AflII	CTTAAG	1 cut(s)	1529
AjnI	CCWGG	2 cut(s)	1262, 1709
AjuI	GAANNNNNNNTTGG	2 cut(s)	1971, 2003
Alw21I	GWGCWC	4 cut(s)	1437, 1768, 1858, 1950
Alw26I	GTCTC	6 cut(s)	271, 294, 840, 1780, 1799, 1895
AlwI	GGATC	3 cut(s)	150, 985, 1635
AlwNI	CAGNNNCTG	1 cut(s)	454
Aor13HI	TCCGGA	1 cut(s)	165
AoxI	GGCC	4 cut(s)	102, 106, 786, 1490
ApeKI	GCWGC	7 cut(s)	203, 500, 648, 1232, 1235, 1846, 1886
ApoI	RAATTY	5 cut(s)	421, 918, 1514, 1534, 2036
AseI	ATTAAT	1 cut(s)	1392
Asp700I	GAANNNNTTC	1 cut(s)	717
AspLEI	GCGC	2 cut(s)	128, 1681
AspS9I	GGNCC	4 cut(s)	221, 1276, 1490, 1720
AsuHPI	GGTGA	6 cut(s)	34, 422, 1148, 1424, 2039, 2081
AsuNHI	GCTAGC	1 cut(s)	1040
AvaII	GGWCC	3 cut(s)	221, 1276, 1720
BaeGI	GKGCMC	1 cut(s)	48
BanI	GGYRCC	1 cut(s)	125
BarI	GAAGNNNNNNTAC	2 cut(s)	933, 965
Bbv12I	GWGCWC	4 cut(s)	1437, 1768, 1858, 1950
BbvI	GCAGC	7 cut(s)	215, 487, 660, 1219, 1247, 1833, 1873
BccI	CCATC	2 cut(s)	806, 1867
BceAI	ACGGC	3 cut(s)	17, 98, 1488
BcgI	CGANNNNNNTGC	2 cut(s)	192, 226
BciT130I	CCWGG	2 cut(s)	1264, 1711
BcoDI	GTCTC	6 cut(s)	271, 294, 840, 1780, 1799, 1895
BfaI	CTAG	6 cut(s)	792, 1041, 1125, 1701, 1796, 1967
BfmI	CTRYAG	2 cut(s)	1233, 1847
BfoI	RGCGCY	1 cut(s)	129
BfrI	CTTAAG	1 cut(s)	1529
BglII	AGATCT	1 cut(s)	2063
BisI	GCNGC	8 cut(s)	204, 315, 501, 649, 1233, 1236, 1847, 1887
BlsI	GCNGC	8 cut(s)	205, 316, 502, 650, 1234, 1237, 1848, 1888
Bme1390I	CCNGG	2 cut(s)	1264, 1711
Bme18I	GGWCC	3 cut(s)	221, 1276, 1720
BmgT120I	GGNCC	4 cut(s)	221, 1276, 1490, 1720
BmiI	GGNNCC	4 cut(s)	127, 1277, 1491, 1722
BmrFI	CCNGG	2 cut(s)	1264, 1711
BmtI	GCTAGC	1 cut(s)	1044
BplI	GAGNNNNNCTC	2 cut(s)	436, 468
BpmI	CTGGAG	2 cut(s)	476, 636
BpuEI	CTTGAG	3 cut(s)	1217, 1631, 2069
BsaHI	GRCGYC	2 cut(s)	126, 833
BsaI	GGTCTC	1 cut(s)	1780
BsaJI	CCNNGG	5 cut(s)	33, 1161, 1227, 1263, 1724
BsaWI	WCCGGW	1 cut(s)	165
Bsc4I	CCNNNNNNNGG	3 cut(s)	1093, 1285, 1823
Bse118I	RCCGGY	1 cut(s)	104
Bse1I	ACTGG	1 cut(s)	619
Bse3DI	GCAATG	2 cut(s)	528, 1347
BseAI	TCCGGA	1 cut(s)	165
BseBI	CCWGG	2 cut(s)	1264, 1711
BseDI	CCNNGG	5 cut(s)	33, 1161, 1227, 1263, 1724
BseGI	GGATG	2 cut(s)	355, 1195
BseLI	CCNNNNNNNGG	3 cut(s)	1093, 1285, 1823
BseMI	GCAATG	2 cut(s)	528, 1347
BseMII	CTCAG	8 cut(s)	225, 233, 305, 434, 525, 999, 1884, 1890
BseNI	ACTGG	1 cut(s)	619
BseRI	GAGGAG	4 cut(s)	259, 1036, 1628, 2033
BseSI	GKGCMC	1 cut(s)	48
BseXI	GCAGC	7 cut(s)	215, 487, 660, 1219, 1247, 1833, 1873
BseYI	CCCAGC	1 cut(s)	148
BsgI	GTGCAG	2 cut(s)	1872, 1947
Bsh1236I	CGCG	1 cut(s)	429
BshFI	GGCC	4 cut(s)	104, 108, 788, 1492
BshNI	GGYRCC	1 cut(s)	125
BsiHKAI	GWGCWC	4 cut(s)	1437, 1768, 1858, 1950
BsiSI	CCGG	2 cut(s)	105, 166
BslFI	GGGAC	1 cut(s)	1289
BslI	CCNNNNNNNGG	3 cut(s)	1093, 1285, 1823
BsmAI	GTCTC	6 cut(s)	271, 294, 840, 1780, 1799, 1895
BsmBI	CGTCTC	1 cut(s)	840
BsmFI	GGGAC	1 cut(s)	1289
BsmI	GAATGC	2 cut(s)	502, 1912
BsnI	GGCC	4 cut(s)	104, 108, 788, 1492
Bso31I	GGTCTC	1 cut(s)	1780
Bsp1286I	GDGCHC	5 cut(s)	48, 1437, 1768, 1858, 1950
Bsp13I	TCCGGA	1 cut(s)	165
Bsp1407I	TGTACA	1 cut(s)	184
Bsp143I	GATC	9 cut(s)	14, 142, 763, 990, 1192, 1459, 1627, 1864, 2063
BspACI	CCGC	8 cut(s)	20, 133, 296, 314, 317, 333, 427, 1058
BspANI	GGCC	4 cut(s)	104, 108, 788, 1492
BspCNI	CTCAG	8 cut(s)	226, 234, 304, 435, 526, 998, 1883, 1891
BspEI	TCCGGA	1 cut(s)	165
BspFNI	CGCG	1 cut(s)	429
BspHI	TCATGA	2 cut(s)	853, 1630
BspLI	GGNNCC	4 cut(s)	127, 1277, 1491, 1722
BspMAI	CTGCAG	2 cut(s)	1237, 1851
BspOI	GCTAGC	1 cut(s)	1044
BspPI	GGATC	3 cut(s)	150, 985, 1635
BspT107I	GGYRCC	1 cut(s)	125
BspTI	CTTAAG	1 cut(s)	1529
BspTNI	GGTCTC	1 cut(s)	1780
BsrDI	GCAATG	2 cut(s)	528, 1347
BsrFI	RCCGGY	1 cut(s)	104
BsrGI	TGTACA	1 cut(s)	184
BsrI	ACTGG	1 cut(s)	619
BssAI	RCCGGY	1 cut(s)	104
BssECI	CCNNGG	5 cut(s)	33, 1161, 1227, 1263, 1724
BssMI	GATC	9 cut(s)	14, 142, 763, 990, 1192, 1459, 1627, 1864, 2063
BssNI	GRCGYC	2 cut(s)	126, 833
BssT1I	CCWWGG	2 cut(s)	1227, 1724
Bst2UI	CCWGG	2 cut(s)	1264, 1711
Bst4CI	ACNGT	5 cut(s)	70, 382, 889, 974, 1906
Bst6I	CTCTTC	4 cut(s)	173, 294, 567, 1263
BstACI	GRCGYC	2 cut(s)	126, 833
BstAFI	CTTAAG	1 cut(s)	1529
BstAPI	GCANNNNNTGC	1 cut(s)	734
BstAUI	TGTACA	1 cut(s)	184
BstC8I	GCNNGC	3 cut(s)	102, 106, 1042
BstDSI	CCRYGG	1 cut(s)	33
BstF5I	GGATG	2 cut(s)	355, 1195
BstFNI	CGCG	1 cut(s)	429
BstH2I	RGCGCY	1 cut(s)	129
BstHHI	GCGC	2 cut(s)	128, 1681
BstKTI	GATC	9 cut(s)	17, 145, 766, 993, 1195, 1462, 1630, 1867, 2066
BstMAI	GTCTC	6 cut(s)	271, 294, 840, 1780, 1799, 1895
BstMBI	GATC	9 cut(s)	14, 142, 763, 990, 1192, 1459, 1627, 1864, 2063
BstMWI	GCNNNNNNNGC	7 cut(s)	110, 125, 168, 734, 1121, 1254, 1895
BstNI	CCWGG	2 cut(s)	1264, 1711
BstNSI	RCATGY	1 cut(s)	1946
BstSCI	CCNGG	2 cut(s)	1262, 1709
BstSFI	CTRYAG	2 cut(s)	1233, 1847
BstSLI	GKGCMC	1 cut(s)	48
BstUI	CGCG	1 cut(s)	429
BstV1I	GCAGC	7 cut(s)	215, 487, 660, 1219, 1247, 1833, 1873
BstX2I	RGATCY	2 cut(s)	990, 2063
BstXI	CCANNNNNNTGG	1 cut(s)	1306
BstYI	RGATCY	2 cut(s)	990, 2063
BsuRI	GGCC	4 cut(s)	104, 108, 788, 1492
BtgI	CCRYGG	1 cut(s)	33
BtsCI	GGATG	2 cut(s)	355, 1195
BtsI	GCAGTG	2 cut(s)	334, 824
BtsIMutI	CAGTG	5 cut(s)	334, 824, 979, 1663, 1911
Cac8I	GCNNGC	3 cut(s)	102, 106, 1042
CaiI	CAGNNNCTG	1 cut(s)	454
CciI	TCATGA	2 cut(s)	853, 1630
CfoI	GCGC	2 cut(s)	128, 1681
Cfr10I	RCCGGY	1 cut(s)	104
Cfr13I	GGNCC	4 cut(s)	221, 1276, 1490, 1720
CseI	GACGC	1 cut(s)	1104
Csp6I	GTAC	2 cut(s)	185, 890
CviAII	CATG	8 cut(s)	110, 854, 995, 1356, 1386, 1430, 1631, 1943
CviQI	GTAC	2 cut(s)	185, 890
DinI	GGCGCC	1 cut(s)	127
DpnI	GATC	9 cut(s)	16, 144, 765, 992, 1194, 1461, 1629, 1866, 2065
DpnII	GATC	9 cut(s)	14, 142, 763, 990, 1192, 1459, 1627, 1864, 2063
DraIII	CACNNNGTG	1 cut(s)	734
EaeI	YGGCCR	1 cut(s)	106
Eam1104I	CTCTTC	4 cut(s)	173, 294, 567, 1263
EarI	CTCTTC	4 cut(s)	173, 294, 567, 1263
EciI	GGCGGA	2 cut(s)	311, 332
Eco130I	CCWWGG	2 cut(s)	1227, 1724
Eco147I	AGGCCT	1 cut(s)	788
Eco31I	GGTCTC	1 cut(s)	1780
Eco32I	GATATC	1 cut(s)	375
Eco47I	GGWCC	3 cut(s)	221, 1276, 1720
Eco57I	CTGAAG	6 cut(s)	141, 302, 867, 974, 1639, 1977
EcoO109I	RGGNCCY	3 cut(s)	221, 1490, 1720
EcoRII	CCWGG	2 cut(s)	1262, 1709
EcoRV	GATATC	1 cut(s)	375
EcoT14I	CCWWGG	2 cut(s)	1227, 1724
EgeI	GGCGCC	1 cut(s)	127
EheI	GGCGCC	1 cut(s)	127
ErhI	CCWWGG	2 cut(s)	1227, 1724
Esp3I	CGTCTC	1 cut(s)	840
FaeI	CATG	8 cut(s)	113, 857, 998, 1359, 1389, 1433, 1634, 1946
FalI	AAGNNNNNCTT	2 cut(s)	950, 982
FaqI	GGGAC	1 cut(s)	1289
FatI	CATG	8 cut(s)	109, 853, 994, 1355, 1385, 1429, 1630, 1942
Fnu4HI	GCNGC	8 cut(s)	204, 315, 501, 649, 1233, 1236, 1847, 1887
FokI	GGATG	2 cut(s)	362, 1202
FseI	GGCCGGCC	1 cut(s)	108
Fsp4HI	GCNGC	8 cut(s)	204, 315, 501, 649, 1233, 1236, 1847, 1887
FspBI	CTAG	6 cut(s)	792, 1041, 1125, 1701, 1796, 1967
GlaI	GCGC	2 cut(s)	127, 1680
GluI	GCNGC	8 cut(s)	204, 315, 501, 649, 1233, 1236, 1847, 1887
GsaI	CCCAGC	1 cut(s)	152
GsuI	CTGGAG	2 cut(s)	476, 636
HaeII	RGCGCY	1 cut(s)	129
HaeIII	GGCC	4 cut(s)	104, 108, 788, 1492
HapII	CCGG	2 cut(s)	105, 166
HgaI	GACGC	1 cut(s)	1104
HhaI	GCGC	2 cut(s)	128, 1681
Hin1I	GRCGYC	2 cut(s)	126, 833
Hin1II	CATG	8 cut(s)	113, 857, 998, 1359, 1389, 1433, 1634, 1946
Hin6I	GCGC	2 cut(s)	126, 1679
HinP1I	GCGC	2 cut(s)	126, 1679
HincII	GTYRAC	1 cut(s)	1009
HindII	GTYRAC	1 cut(s)	1009
HindIII	AAGCTT	1 cut(s)	806
HpaII	CCGG	2 cut(s)	105, 166
HphI	GGTGA	6 cut(s)	34, 422, 1148, 1424, 2039, 2081
Hpy166II	GTNNAC	5 cut(s)	25, 185, 631, 1009, 1447
Hpy8I	GTNNAC	5 cut(s)	25, 185, 631, 1009, 1447
Hpy99I	CGWCG	4 cut(s)	95, 119, 382, 434
HpyCH4III	ACNGT	5 cut(s)	70, 382, 889, 974, 1906
HpyCH4IV	ACGT	2 cut(s)	432, 833
HpyCH4V	TGCA	9 cut(s)	503, 728, 737, 914, 1052, 1235, 1849, 1889, 1928
HpyF10VI	GCNNNNNNNGC	7 cut(s)	110, 125, 168, 734, 1121, 1254, 1895
HpySE526I	ACGT	2 cut(s)	432, 833
Hsp92I	GRCGYC	2 cut(s)	126, 833
Hsp92II	CATG	8 cut(s)	113, 857, 998, 1359, 1389, 1433, 1634, 1946
HspAI	GCGC	2 cut(s)	126, 1679
KasI	GGCGCC	1 cut(s)	125
Kpn2I	TCCGGA	1 cut(s)	165
KroI	GCCGGC	1 cut(s)	104
KroNI	GCCGGC	1 cut(s)	106
Kzo9I	GATC	9 cut(s)	14, 142, 763, 990, 1192, 1459, 1627, 1864, 2063
LmnI	GCTCC	6 cut(s)	159, 168, 319, 1049, 1735, 1861
Lsp1109I	GCAGC	7 cut(s)	215, 487, 660, 1219, 1247, 1833, 1873
MaeI	CTAG	6 cut(s)	792, 1041, 1125, 1701, 1796, 1967
MaeII	ACGT	2 cut(s)	432, 833
MalI	GATC	9 cut(s)	16, 144, 765, 992, 1194, 1461, 1629, 1866, 2065
MboI	GATC	9 cut(s)	14, 142, 763, 990, 1192, 1459, 1627, 1864, 2063
MfeI	CAATTG	1 cut(s)	1205
MflI	RGATCY	2 cut(s)	990, 2063
MhlI	GDGCHC	5 cut(s)	48, 1437, 1768, 1858, 1950
Mly113I	GGCGCC	1 cut(s)	126
MlyI	GAGTC	3 cut(s)	389, 454, 1801
MroI	TCCGGA	1 cut(s)	165
MroNI	GCCGGC	1 cut(s)	104
MroXI	GAANNNNTTC	1 cut(s)	717
MseI	TTAA	9 cut(s)	174, 519, 797, 899, 1392, 1530, 1592, 1601, 1731
MspA1I	CMGCKG	2 cut(s)	206, 1886
MspCI	CTTAAG	1 cut(s)	1529
MspI	CCGG	2 cut(s)	105, 166
MspR9I	CCNGG	2 cut(s)	1264, 1711
MunI	CAATTG	1 cut(s)	1205
Mva1269I	GAATGC	2 cut(s)	502, 1912
MvaI	CCWGG	2 cut(s)	1264, 1711
MvnI	CGCG	1 cut(s)	429
MwoI	GCNNNNNNNGC	7 cut(s)	110, 125, 168, 734, 1121, 1254, 1895
NaeI	GCCGGC	1 cut(s)	106
NarI	GGCGCC	1 cut(s)	126
NdeII	GATC	9 cut(s)	14, 142, 763, 990, 1192, 1459, 1627, 1864, 2063
NgoMIV	GCCGGC	1 cut(s)	104
NheI	GCTAGC	1 cut(s)	1040
NlaIII	CATG	8 cut(s)	113, 857, 998, 1359, 1389, 1433, 1634, 1946
NlaIV	GGNNCC	4 cut(s)	127, 1277, 1491, 1722
NmeAIII	GCCGAG	1 cut(s)	1186
NspI	RCATGY	1 cut(s)	1946
PagI	TCATGA	2 cut(s)	853, 1630
PceI	AGGCCT	1 cut(s)	788
PcsI	WCGNNNNNNNCGW	1 cut(s)	87
PctI	GAATGC	2 cut(s)	502, 1912
PdiI	GCCGGC	1 cut(s)	106
PdmI	GAANNNNTTC	1 cut(s)	717
PfoI	TCCNGGA	1 cut(s)	1709
PkrI	GCNGC	8 cut(s)	205, 316, 502, 650, 1234, 1237, 1848, 1888
PleI	GAGTC	3 cut(s)	389, 453, 1801
PluTI	GGCGCC	1 cut(s)	129
PpsI	GAGTC	3 cut(s)	389, 453, 1801
PpuMI	RGGWCCY	2 cut(s)	221, 1720
PshBI	ATTAAT	1 cut(s)	1392
Psp5II	RGGWCCY	2 cut(s)	221, 1720
Psp6I	CCWGG	2 cut(s)	1262, 1709
PspFI	CCCAGC	1 cut(s)	148
PspGI	CCWGG	2 cut(s)	1262, 1709
PspN4I	GGNNCC	4 cut(s)	127, 1277, 1491, 1722
PspPI	GGNCC	4 cut(s)	221, 1276, 1490, 1720
PspPPI	RGGWCCY	2 cut(s)	221, 1720
PstI	CTGCAG	2 cut(s)	1237, 1851
PstNI	CAGNNNCTG	1 cut(s)	454
PsuI	RGATCY	2 cut(s)	990, 2063
PvuII	CAGCTG	2 cut(s)	206, 1886
RigI	GGCCGGCC	1 cut(s)	108
RsaI	GTAC	2 cut(s)	186, 891
RsaNI	GTAC	2 cut(s)	185, 890
SaqAI	TTAA	9 cut(s)	174, 519, 797, 899, 1392, 1530, 1592, 1601, 1731
SatI	GCNGC	8 cut(s)	204, 315, 501, 649, 1233, 1236, 1847, 1887
Sau3AI	GATC	9 cut(s)	14, 142, 763, 990, 1192, 1459, 1627, 1864, 2063
Sau96I	GGNCC	4 cut(s)	221, 1276, 1490, 1720
SchI	GAGTC	3 cut(s)	389, 454, 1801
ScrFI	CCNGG	2 cut(s)	1264, 1711
SduI	GDGCHC	5 cut(s)	48, 1437, 1768, 1858, 1950
SfcI	CTRYAG	2 cut(s)	1233, 1847
SfoI	GGCGCC	1 cut(s)	127
SinI	GGWCC	3 cut(s)	221, 1276, 1720
SmlI	CTYRAG	4 cut(s)	1196, 1529, 1610, 2048
SmoI	CTYRAG	4 cut(s)	1196, 1529, 1610, 2048
SseBI	AGGCCT	1 cut(s)	788
SsiI	CCGC	8 cut(s)	20, 133, 296, 314, 317, 333, 427, 1058
SspDI	GGCGCC	1 cut(s)	125
SspI	AATATT	1 cut(s)	1622
SspMI	CTAG	6 cut(s)	792, 1041, 1125, 1701, 1796, 1967
StuI	AGGCCT	1 cut(s)	788
StyD4I	CCNGG	2 cut(s)	1262, 1709
StyI	CCWWGG	2 cut(s)	1227, 1724
TaaI	ACNGT	5 cut(s)	70, 382, 889, 974, 1906
TaiI	ACGT	2 cut(s)	435, 836
TaqI	TCGA	6 cut(s)	377, 677, 922, 1743, 1950, 1977
TatI	WGTACW	2 cut(s)	184, 889
TauI	GCSGC	1 cut(s)	317
Tru1I	TTAA	9 cut(s)	174, 519, 797, 899, 1392, 1530, 1592, 1601, 1731
Tru9I	TTAA	9 cut(s)	174, 519, 797, 899, 1392, 1530, 1592, 1601, 1731
TscAI	CASTG	5 cut(s)	334, 831, 979, 1663, 1911
TseI	GCWGC	7 cut(s)	203, 500, 648, 1232, 1235, 1846, 1886
TspGWI	ACGGA	2 cut(s)	79, 1821
TspRI	CASTG	5 cut(s)	334, 831, 979, 1663, 1911
Vha464I	CTTAAG	1 cut(s)	1529
VpaK11BI	GGWCC	3 cut(s)	221, 1276, 1720
VspI	ATTAAT	1 cut(s)	1392
XapI	RAATTY	5 cut(s)	421, 918, 1514, 1534, 2036
XbaI	TCTAGA	1 cut(s)	1795
XceI	RCATGY	1 cut(s)	1946
XmnI	GAANNNNTTC	1 cut(s)	717
XspI	CTAG	6 cut(s)	792, 1041, 1125, 1701, 1796, 1967
ZraI	GACGTC	1 cut(s)	834

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.