Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0004609

Physical Location & Seq

Genomic Coordinates Reverse (-)

12277973 .. 12286080

Gene Structure 8108 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00291920.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGTCGTGGCTGAGATCGGCGGTGAACAAAGCCGTGGAGGTTGGGCACAACAACAACCTCACTCGCACCGTCAGGAACTACGCCGATTCTGTCGTCCAGCAGGCCGGCCATGCCGTCGCTGAAGGCGCCAAGCGGTTTCAGGATCGGCTGGGGAATCGGAGCTTCCGGAGCGTTAAGAAGAGTGTACAGAGATTGGAGGAAGCAGCTGTGTCGTGTAGAGGACCTGAAAGGGCTGAGATACTGAGGAGGTGGGTGGTTCTGCTCAAAGAGGTGGAGAGACTGAAGCTGTCTCAGGCGGAAGAGAAGGAAAAGGCGGCGGAGCAGAGCAGTGGCGGTGGTGCTTCGGAGGATGTTAGTGATATTCGGAGGAAGATATCGACGGTTTTGTATTATGACTCTGATGTTGGTGGTGAGCCGATGAATTTCCGCGACGTTTTTCTTCTGAGTCAGGCTCTGGAGGGCATTACATTGTCTATGGTATGTGTTTCAATAATGAATGCTGCAAGTGTGCTTGAAATTAAATATGGCATTGCTGAGAAGGAAATGGGGATTCTTGAAGCACCAAATGATGAAGAGGTTGCCTTGCTCTCGGAGATGTTTAGGCTCTGTCTTACTGGAGGGAAAGAAGTTCACAATGCTATTGTAAGCAGCATACAGGACTTGGCAACAGCTTTTTCGAGCTACAACGATGAAGTATTGGTAAAGCGAGAGGAATTGCTTCAATTTGCACAGAGTGCAATTACAGGATTGAAGATAAATGCTGATCTTGGAAGAATAGATGATGAGGCCTCTAGGTTAAAGAAGAAGCTTGATGGAAGGACACCACTGCTGACGTCTCCTTCAACTGAAGGTCATGACAAAGTATCGGAAGAAACAAAATTGGAAACAGTACAGGCATTAAAAAAAGCACTTGCACAAATTCGAGCTTGTTCCAGATTAGAAGGGCTTTTACTGAAGAAGAAACTCTTGAACAGTGGAGATTCCTCAGAGATCCATGCTCAAAAAGTTGACAAATTGAAGGTTTTATCAGAATCTCTTGCTAGCTCCTCTGCAAAAGCGGAAAATCGTATTTCAGATAACAGAATCCAAAAGGAGGAAGCTCTAAAAGTTCGTGCGTCTAAAGCTAGTGAAGTGGGTGAAAGAGAGAAGGAAATAGAAGCCGAGGTTTCAGAGCTTGAAAGACAAAGGGATGATCTTGAGGCTCAATTGAAAAAGGTCAATATCTCCTTGGCTGCAGCTAATTCTCGCCTTCGCAATACCAGGGAAGAGAGGGACCAATTTGAGGAAGCTAATACCAAGATTGTGGCTCACTTGGAAACAAAGGAAGATGAACTATCAAAATCCATTGCTTCATGTAAGGTTGAGGCAGATGTTCTACATACATGGATTAATTTTTGGAAGATACTTGGTGATGAATTGGAGAAACATGAGCACTATTTTGTGAACTTCGCCATTGATCTTCTCTCTGCCTACAAGAAAGAGTTGGGGCCTTCTATCAGCCGTATAGGGAAATTTGTGGAGAATCTTAAGAATTTGAGCAAGAAGTCAGGGGTGGTATCTAACGCAGAGAATGAGGATTCTAAGGCATTAAATCCATTAAGAAGTCTTGAGGAGGAATATTTGGATCATGAAACCAAGATTATTACCACCTTCAGTGTAGTTGATAATATGAAAGCGCACTTTTATTCAGAACAGGCTAGAACTTCCAGGAAAGAGGACCCAAGGGTTAAGGAGCTGTTCGATGATATTGAAAAACTAAGAGCACAATTTGAAGCTGTTGAGAGACCAATTCTAGAAATAGAGACTCCAATTCCCCAAGCTGGAACTCCGTCTGATGACAAGCTGCAGAGTGCTCCATCTGATCTCTCAGCAGAGGGTTCAGCTGCACAGAAAGCTGAGACAGTGAAGCATTCAAAGTCGGGTGCAGTCAAGGTAGAGCATGTGCTCGACCCTGAAGATGACCTAGCAAAGCTCGAATCAGAGTTTGGCAAGGTTGGTCAAGACTACTCAACAGAGGAGGTGGGTGAGTGGGAATTTGACGAGCTTGAGAGGGAACTAAGATCTGGTGATTCATCAACTACCAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

695

Amino Acids

77.51

Weight (kDa)

5.28

Isoelectric Point (pI)

43.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004609)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13560
fragaria_vesca	FvH4_7g20871 FvH4_7g20871
malus_domestica	MD07G1186500.v1.1 MD13G1157000.v1.1
prunus_persica	Prupe.2G225300_v2.0.a1
pyrus_communis	pycom01g14560 pycom07g17780
rosa_chinensis	RchiOBHm_Chr1g0365121 RchiOBHm_Chr7g0221351
rosa_laevigata	RLG00000014849 RLG00000027440 RLG00000028869
rosa_multiflora	Rmu_co8467635.1_g000001 Rmu_sc0001688.1_g000008
rosa_roxburghii	Rroxscaffold_4G00291410 Rroxscaffold_4G00291920
rosa_rugosa	Rorug01G0320000 Rorug01G0320100
rosa_samantha	Rh1AG328700 Rh1BG290300 Rh1CG307000 Rh1DG321900 Rh2DG217200 Rh3AG000700 Rh3BG000500 Rh3CG000500 Rh3DG000700 Rh7AG341600 Rh7CG359500
rosa_wichuraiana	Rw1G029170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	836
AccB1I	GGYRCC	1 cut(s)	125
AccII	CGCG	1 cut(s)	429
AccIII	TCCGGA	1 cut(s)	165
AciI	CCGC	8 cut(s)	20, 133, 296, 314, 317, 333, 427, 1058
AclWI	GGATC	3 cut(s)	150, 985, 1632
AcoI	YGGCCR	1 cut(s)	106
AcsI	RAATTY	5 cut(s)	421, 918, 1511, 1531, 2033
AcuI	CTGAAG	6 cut(s)	141, 302, 867, 974, 1636, 1974
AcyI	GRCGYC	2 cut(s)	126, 833
AdeI	CACNNNGTG	1 cut(s)	734
AfaI	GTAC	2 cut(s)	186, 891
AfiI	CCNNNNNNNGG	3 cut(s)	1093, 1282, 1820
AflII	CTTAAG	1 cut(s)	1526
AjnI	CCWGG	2 cut(s)	1259, 1706
AjuI	GAANNNNNNNTTGG	2 cut(s)	1968, 2000
Alw21I	GWGCWC	4 cut(s)	1434, 1765, 1855, 1947
Alw26I	GTCTC	6 cut(s)	271, 294, 840, 1777, 1796, 1892
AlwI	GGATC	3 cut(s)	150, 985, 1632
AlwNI	CAGNNNCTG	1 cut(s)	454
Aor13HI	TCCGGA	1 cut(s)	165
AoxI	GGCC	4 cut(s)	102, 106, 786, 1487
ApeKI	GCWGC	7 cut(s)	203, 500, 648, 1232, 1235, 1843, 1883
ApoI	RAATTY	5 cut(s)	421, 918, 1511, 1531, 2033
AseI	ATTAAT	1 cut(s)	1389
Asp700I	GAANNNNTTC	1 cut(s)	717
AspLEI	GCGC	2 cut(s)	128, 1678
AspS9I	GGNCC	4 cut(s)	221, 1273, 1487, 1717
AsuHPI	GGTGA	6 cut(s)	34, 422, 1148, 1421, 2036, 2078
AsuNHI	GCTAGC	1 cut(s)	1040
AvaII	GGWCC	3 cut(s)	221, 1273, 1717
BaeGI	GKGCMC	1 cut(s)	48
BanI	GGYRCC	1 cut(s)	125
BarI	GAAGNNNNNNTAC	2 cut(s)	933, 965
Bbv12I	GWGCWC	4 cut(s)	1434, 1765, 1855, 1947
BbvI	GCAGC	7 cut(s)	215, 487, 660, 1219, 1247, 1830, 1870
BccI	CCATC	2 cut(s)	806, 1864
BceAI	ACGGC	3 cut(s)	17, 98, 1485
BcgI	CGANNNNNNTGC	2 cut(s)	192, 226
BciT130I	CCWGG	2 cut(s)	1261, 1708
BcoDI	GTCTC	6 cut(s)	271, 294, 840, 1777, 1796, 1892
BfaI	CTAG	6 cut(s)	792, 1041, 1125, 1698, 1793, 1964
BfmI	CTRYAG	2 cut(s)	1233, 1844
BfoI	RGCGCY	1 cut(s)	129
BfrI	CTTAAG	1 cut(s)	1526
BglII	AGATCT	1 cut(s)	2060
BisI	GCNGC	8 cut(s)	204, 315, 501, 649, 1233, 1236, 1844, 1884
BlsI	GCNGC	8 cut(s)	205, 316, 502, 650, 1234, 1237, 1845, 1885
Bme1390I	CCNGG	2 cut(s)	1261, 1708
Bme18I	GGWCC	3 cut(s)	221, 1273, 1717
BmgT120I	GGNCC	4 cut(s)	221, 1273, 1487, 1717
BmiI	GGNNCC	4 cut(s)	127, 1274, 1488, 1719
BmrFI	CCNGG	2 cut(s)	1261, 1708
BmtI	GCTAGC	1 cut(s)	1044
BplI	GAGNNNNNCTC	2 cut(s)	436, 468
BpmI	CTGGAG	2 cut(s)	476, 636
BpuEI	CTTGAG	3 cut(s)	1217, 1628, 2066
BsaHI	GRCGYC	2 cut(s)	126, 833
BsaI	GGTCTC	1 cut(s)	1777
BsaJI	CCNNGG	5 cut(s)	33, 1161, 1227, 1260, 1721
BsaWI	WCCGGW	1 cut(s)	165
Bsc4I	CCNNNNNNNGG	3 cut(s)	1093, 1282, 1820
Bse118I	RCCGGY	1 cut(s)	104
Bse1I	ACTGG	1 cut(s)	619
Bse3DI	GCAATG	2 cut(s)	528, 1344
BseAI	TCCGGA	1 cut(s)	165
BseBI	CCWGG	2 cut(s)	1261, 1708
BseDI	CCNNGG	5 cut(s)	33, 1161, 1227, 1260, 1721
BseGI	GGATG	2 cut(s)	355, 1195
BseLI	CCNNNNNNNGG	3 cut(s)	1093, 1282, 1820
BseMI	GCAATG	2 cut(s)	528, 1344
BseMII	CTCAG	8 cut(s)	225, 233, 305, 434, 525, 999, 1881, 1887
BseNI	ACTGG	1 cut(s)	619
BseRI	GAGGAG	4 cut(s)	259, 1036, 1625, 2030
BseSI	GKGCMC	1 cut(s)	48
BseXI	GCAGC	7 cut(s)	215, 487, 660, 1219, 1247, 1830, 1870
BseYI	CCCAGC	1 cut(s)	148
BsgI	GTGCAG	2 cut(s)	1869, 1944
Bsh1236I	CGCG	1 cut(s)	429
BshFI	GGCC	4 cut(s)	104, 108, 788, 1489
BshNI	GGYRCC	1 cut(s)	125
BsiHKAI	GWGCWC	4 cut(s)	1434, 1765, 1855, 1947
BsiSI	CCGG	2 cut(s)	105, 166
BslFI	GGGAC	1 cut(s)	1286
BslI	CCNNNNNNNGG	3 cut(s)	1093, 1282, 1820
BsmAI	GTCTC	6 cut(s)	271, 294, 840, 1777, 1796, 1892
BsmBI	CGTCTC	1 cut(s)	840
BsmFI	GGGAC	1 cut(s)	1286
BsmI	GAATGC	2 cut(s)	502, 1909
BsnI	GGCC	4 cut(s)	104, 108, 788, 1489
Bso31I	GGTCTC	1 cut(s)	1777
Bsp1286I	GDGCHC	5 cut(s)	48, 1434, 1765, 1855, 1947
Bsp13I	TCCGGA	1 cut(s)	165
Bsp1407I	TGTACA	1 cut(s)	184
Bsp143I	GATC	9 cut(s)	14, 142, 763, 990, 1192, 1456, 1624, 1861, 2060
BspACI	CCGC	8 cut(s)	20, 133, 296, 314, 317, 333, 427, 1058
BspANI	GGCC	4 cut(s)	104, 108, 788, 1489
BspCNI	CTCAG	8 cut(s)	226, 234, 304, 435, 526, 998, 1880, 1888
BspEI	TCCGGA	1 cut(s)	165
BspFNI	CGCG	1 cut(s)	429
BspHI	TCATGA	2 cut(s)	853, 1627
BspLI	GGNNCC	4 cut(s)	127, 1274, 1488, 1719
BspMAI	CTGCAG	2 cut(s)	1237, 1848
BspOI	GCTAGC	1 cut(s)	1044
BspPI	GGATC	3 cut(s)	150, 985, 1632
BspT107I	GGYRCC	1 cut(s)	125
BspTI	CTTAAG	1 cut(s)	1526
BspTNI	GGTCTC	1 cut(s)	1777
BsrDI	GCAATG	2 cut(s)	528, 1344
BsrFI	RCCGGY	1 cut(s)	104
BsrGI	TGTACA	1 cut(s)	184
BsrI	ACTGG	1 cut(s)	619
BssAI	RCCGGY	1 cut(s)	104
BssECI	CCNNGG	5 cut(s)	33, 1161, 1227, 1260, 1721
BssMI	GATC	9 cut(s)	14, 142, 763, 990, 1192, 1456, 1624, 1861, 2060
BssNI	GRCGYC	2 cut(s)	126, 833
BssT1I	CCWWGG	2 cut(s)	1227, 1721
Bst2UI	CCWGG	2 cut(s)	1261, 1708
Bst4CI	ACNGT	5 cut(s)	70, 382, 889, 974, 1903
Bst6I	CTCTTC	4 cut(s)	173, 294, 567, 1260
BstACI	GRCGYC	2 cut(s)	126, 833
BstAFI	CTTAAG	1 cut(s)	1526
BstAPI	GCANNNNNTGC	1 cut(s)	734
BstAUI	TGTACA	1 cut(s)	184
BstC8I	GCNNGC	3 cut(s)	102, 106, 1042
BstDSI	CCRYGG	1 cut(s)	33
BstF5I	GGATG	2 cut(s)	355, 1195
BstFNI	CGCG	1 cut(s)	429
BstH2I	RGCGCY	1 cut(s)	129
BstHHI	GCGC	2 cut(s)	128, 1678
BstKTI	GATC	9 cut(s)	17, 145, 766, 993, 1195, 1459, 1627, 1864, 2063
BstMAI	GTCTC	6 cut(s)	271, 294, 840, 1777, 1796, 1892
BstMBI	GATC	9 cut(s)	14, 142, 763, 990, 1192, 1456, 1624, 1861, 2060
BstMWI	GCNNNNNNNGC	6 cut(s)	110, 125, 168, 734, 1121, 1892
BstNI	CCWGG	2 cut(s)	1261, 1708
BstNSI	RCATGY	1 cut(s)	1943
BstSCI	CCNGG	2 cut(s)	1259, 1706
BstSFI	CTRYAG	2 cut(s)	1233, 1844
BstSLI	GKGCMC	1 cut(s)	48
BstUI	CGCG	1 cut(s)	429
BstV1I	GCAGC	7 cut(s)	215, 487, 660, 1219, 1247, 1830, 1870
BstX2I	RGATCY	2 cut(s)	990, 2060
BstXI	CCANNNNNNTGG	1 cut(s)	1303
BstYI	RGATCY	2 cut(s)	990, 2060
BsuRI	GGCC	4 cut(s)	104, 108, 788, 1489
BtgI	CCRYGG	1 cut(s)	33
BtsCI	GGATG	2 cut(s)	355, 1195
BtsI	GCAGTG	2 cut(s)	334, 824
BtsIMutI	CAGTG	5 cut(s)	334, 824, 979, 1660, 1908
Cac8I	GCNNGC	3 cut(s)	102, 106, 1042
CaiI	CAGNNNCTG	1 cut(s)	454
CciI	TCATGA	2 cut(s)	853, 1627
CfoI	GCGC	2 cut(s)	128, 1678
Cfr10I	RCCGGY	1 cut(s)	104
Cfr13I	GGNCC	4 cut(s)	221, 1273, 1487, 1717
CseI	GACGC	1 cut(s)	1104
Csp6I	GTAC	2 cut(s)	185, 890
CviAII	CATG	8 cut(s)	110, 854, 995, 1353, 1383, 1427, 1628, 1940
CviQI	GTAC	2 cut(s)	185, 890
DinI	GGCGCC	1 cut(s)	127
DpnI	GATC	9 cut(s)	16, 144, 765, 992, 1194, 1458, 1626, 1863, 2062
DpnII	GATC	9 cut(s)	14, 142, 763, 990, 1192, 1456, 1624, 1861, 2060
DraIII	CACNNNGTG	1 cut(s)	734
EaeI	YGGCCR	1 cut(s)	106
Eam1104I	CTCTTC	4 cut(s)	173, 294, 567, 1260
EarI	CTCTTC	4 cut(s)	173, 294, 567, 1260
EciI	GGCGGA	2 cut(s)	311, 332
Eco130I	CCWWGG	2 cut(s)	1227, 1721
Eco147I	AGGCCT	1 cut(s)	788
Eco31I	GGTCTC	1 cut(s)	1777
Eco32I	GATATC	1 cut(s)	375
Eco47I	GGWCC	3 cut(s)	221, 1273, 1717
Eco57I	CTGAAG	6 cut(s)	141, 302, 867, 974, 1636, 1974
EcoO109I	RGGNCCY	3 cut(s)	221, 1487, 1717
EcoRII	CCWGG	2 cut(s)	1259, 1706
EcoRV	GATATC	1 cut(s)	375
EcoT14I	CCWWGG	2 cut(s)	1227, 1721
EgeI	GGCGCC	1 cut(s)	127
EheI	GGCGCC	1 cut(s)	127
ErhI	CCWWGG	2 cut(s)	1227, 1721
Esp3I	CGTCTC	1 cut(s)	840
FaeI	CATG	8 cut(s)	113, 857, 998, 1356, 1386, 1430, 1631, 1943
FalI	AAGNNNNNCTT	2 cut(s)	950, 982
FaqI	GGGAC	1 cut(s)	1286
FatI	CATG	8 cut(s)	109, 853, 994, 1352, 1382, 1426, 1627, 1939
Fnu4HI	GCNGC	8 cut(s)	204, 315, 501, 649, 1233, 1236, 1844, 1884
FokI	GGATG	2 cut(s)	362, 1202
FseI	GGCCGGCC	1 cut(s)	108
Fsp4HI	GCNGC	8 cut(s)	204, 315, 501, 649, 1233, 1236, 1844, 1884
FspBI	CTAG	6 cut(s)	792, 1041, 1125, 1698, 1793, 1964
GlaI	GCGC	2 cut(s)	127, 1677
GluI	GCNGC	8 cut(s)	204, 315, 501, 649, 1233, 1236, 1844, 1884
GsaI	CCCAGC	1 cut(s)	152
GsuI	CTGGAG	2 cut(s)	476, 636
HaeII	RGCGCY	1 cut(s)	129
HaeIII	GGCC	4 cut(s)	104, 108, 788, 1489
HapII	CCGG	2 cut(s)	105, 166
HgaI	GACGC	1 cut(s)	1104
HhaI	GCGC	2 cut(s)	128, 1678
Hin1I	GRCGYC	2 cut(s)	126, 833
Hin1II	CATG	8 cut(s)	113, 857, 998, 1356, 1386, 1430, 1631, 1943
Hin6I	GCGC	2 cut(s)	126, 1676
HinP1I	GCGC	2 cut(s)	126, 1676
HincII	GTYRAC	1 cut(s)	1009
HindII	GTYRAC	1 cut(s)	1009
HindIII	AAGCTT	1 cut(s)	806
HpaII	CCGG	2 cut(s)	105, 166
HphI	GGTGA	6 cut(s)	34, 422, 1148, 1421, 2036, 2078
Hpy166II	GTNNAC	5 cut(s)	25, 185, 631, 1009, 1444
Hpy8I	GTNNAC	5 cut(s)	25, 185, 631, 1009, 1444
Hpy99I	CGWCG	3 cut(s)	119, 382, 434
HpyCH4III	ACNGT	5 cut(s)	70, 382, 889, 974, 1903
HpyCH4IV	ACGT	2 cut(s)	432, 833
HpyCH4V	TGCA	9 cut(s)	503, 728, 737, 914, 1052, 1235, 1846, 1886, 1925
HpyF10VI	GCNNNNNNNGC	6 cut(s)	110, 125, 168, 734, 1121, 1892
HpySE526I	ACGT	2 cut(s)	432, 833
Hsp92I	GRCGYC	2 cut(s)	126, 833
Hsp92II	CATG	8 cut(s)	113, 857, 998, 1356, 1386, 1430, 1631, 1943
HspAI	GCGC	2 cut(s)	126, 1676
KasI	GGCGCC	1 cut(s)	125
Kpn2I	TCCGGA	1 cut(s)	165
KroI	GCCGGC	1 cut(s)	104
KroNI	GCCGGC	1 cut(s)	106
Kzo9I	GATC	9 cut(s)	14, 142, 763, 990, 1192, 1456, 1624, 1861, 2060
LmnI	GCTCC	6 cut(s)	159, 168, 319, 1049, 1732, 1858
Lsp1109I	GCAGC	7 cut(s)	215, 487, 660, 1219, 1247, 1830, 1870
MaeI	CTAG	6 cut(s)	792, 1041, 1125, 1698, 1793, 1964
MaeII	ACGT	2 cut(s)	432, 833
MalI	GATC	9 cut(s)	16, 144, 765, 992, 1194, 1458, 1626, 1863, 2062
MboI	GATC	9 cut(s)	14, 142, 763, 990, 1192, 1456, 1624, 1861, 2060
MfeI	CAATTG	1 cut(s)	1205
MflI	RGATCY	2 cut(s)	990, 2060
MhlI	GDGCHC	5 cut(s)	48, 1434, 1765, 1855, 1947
Mly113I	GGCGCC	1 cut(s)	126
MlyI	GAGTC	3 cut(s)	389, 454, 1798
MroI	TCCGGA	1 cut(s)	165
MroNI	GCCGGC	1 cut(s)	104
MroXI	GAANNNNTTC	1 cut(s)	717
MseI	TTAA	9 cut(s)	174, 519, 797, 899, 1389, 1527, 1589, 1598, 1728
MspA1I	CMGCKG	2 cut(s)	206, 1883
MspCI	CTTAAG	1 cut(s)	1526
MspI	CCGG	2 cut(s)	105, 166
MspR9I	CCNGG	2 cut(s)	1261, 1708
MunI	CAATTG	1 cut(s)	1205
Mva1269I	GAATGC	2 cut(s)	502, 1909
MvaI	CCWGG	2 cut(s)	1261, 1708
MvnI	CGCG	1 cut(s)	429
MwoI	GCNNNNNNNGC	6 cut(s)	110, 125, 168, 734, 1121, 1892
NaeI	GCCGGC	1 cut(s)	106
NarI	GGCGCC	1 cut(s)	126
NdeII	GATC	9 cut(s)	14, 142, 763, 990, 1192, 1456, 1624, 1861, 2060
NgoMIV	GCCGGC	1 cut(s)	104
NheI	GCTAGC	1 cut(s)	1040
NlaIII	CATG	8 cut(s)	113, 857, 998, 1356, 1386, 1430, 1631, 1943
NlaIV	GGNNCC	4 cut(s)	127, 1274, 1488, 1719
NmeAIII	GCCGAG	1 cut(s)	1186
NspI	RCATGY	1 cut(s)	1943
PagI	TCATGA	2 cut(s)	853, 1627
PceI	AGGCCT	1 cut(s)	788
PctI	GAATGC	2 cut(s)	502, 1909
PdiI	GCCGGC	1 cut(s)	106
PdmI	GAANNNNTTC	1 cut(s)	717
PfoI	TCCNGGA	1 cut(s)	1706
PkrI	GCNGC	8 cut(s)	205, 316, 502, 650, 1234, 1237, 1845, 1885
PleI	GAGTC	3 cut(s)	389, 453, 1798
PluTI	GGCGCC	1 cut(s)	129
PpsI	GAGTC	3 cut(s)	389, 453, 1798
PpuMI	RGGWCCY	2 cut(s)	221, 1717
PshBI	ATTAAT	1 cut(s)	1389
Psp5II	RGGWCCY	2 cut(s)	221, 1717
Psp6I	CCWGG	2 cut(s)	1259, 1706
PspFI	CCCAGC	1 cut(s)	148
PspGI	CCWGG	2 cut(s)	1259, 1706
PspN4I	GGNNCC	4 cut(s)	127, 1274, 1488, 1719
PspPI	GGNCC	4 cut(s)	221, 1273, 1487, 1717
PspPPI	RGGWCCY	2 cut(s)	221, 1717
PstI	CTGCAG	2 cut(s)	1237, 1848
PstNI	CAGNNNCTG	1 cut(s)	454
PsuI	RGATCY	2 cut(s)	990, 2060
PvuII	CAGCTG	2 cut(s)	206, 1883
RigI	GGCCGGCC	1 cut(s)	108
RsaI	GTAC	2 cut(s)	186, 891
RsaNI	GTAC	2 cut(s)	185, 890
SaqAI	TTAA	9 cut(s)	174, 519, 797, 899, 1389, 1527, 1589, 1598, 1728
SatI	GCNGC	8 cut(s)	204, 315, 501, 649, 1233, 1236, 1844, 1884
Sau3AI	GATC	9 cut(s)	14, 142, 763, 990, 1192, 1456, 1624, 1861, 2060
Sau96I	GGNCC	4 cut(s)	221, 1273, 1487, 1717
SchI	GAGTC	3 cut(s)	389, 454, 1798
ScrFI	CCNGG	2 cut(s)	1261, 1708
SduI	GDGCHC	5 cut(s)	48, 1434, 1765, 1855, 1947
SfcI	CTRYAG	2 cut(s)	1233, 1844
SfoI	GGCGCC	1 cut(s)	127
SinI	GGWCC	3 cut(s)	221, 1273, 1717
SmlI	CTYRAG	4 cut(s)	1196, 1526, 1607, 2045
SmoI	CTYRAG	4 cut(s)	1196, 1526, 1607, 2045
SseBI	AGGCCT	1 cut(s)	788
SsiI	CCGC	8 cut(s)	20, 133, 296, 314, 317, 333, 427, 1058
SspDI	GGCGCC	1 cut(s)	125
SspI	AATATT	1 cut(s)	1619
SspMI	CTAG	6 cut(s)	792, 1041, 1125, 1698, 1793, 1964
StuI	AGGCCT	1 cut(s)	788
StyD4I	CCNGG	2 cut(s)	1259, 1706
StyI	CCWWGG	2 cut(s)	1227, 1721
TaaI	ACNGT	5 cut(s)	70, 382, 889, 974, 1903
TaiI	ACGT	2 cut(s)	435, 836
TaqI	TCGA	6 cut(s)	377, 677, 922, 1740, 1947, 1974
TatI	WGTACW	2 cut(s)	184, 889
TauI	GCSGC	1 cut(s)	317
Tru1I	TTAA	9 cut(s)	174, 519, 797, 899, 1389, 1527, 1589, 1598, 1728
Tru9I	TTAA	9 cut(s)	174, 519, 797, 899, 1389, 1527, 1589, 1598, 1728
TscAI	CASTG	5 cut(s)	334, 831, 979, 1660, 1908
TseI	GCWGC	7 cut(s)	203, 500, 648, 1232, 1235, 1843, 1883
TspGWI	ACGGA	1 cut(s)	1818
TspRI	CASTG	5 cut(s)	334, 831, 979, 1660, 1908
Vha464I	CTTAAG	1 cut(s)	1526
VpaK11BI	GGWCC	3 cut(s)	221, 1273, 1717
VspI	ATTAAT	1 cut(s)	1389
XapI	RAATTY	5 cut(s)	421, 918, 1511, 1531, 2033
XbaI	TCTAGA	1 cut(s)	1792
XceI	RCATGY	1 cut(s)	1943
XmnI	GAANNNNTTC	1 cut(s)	717
XspI	CTAG	6 cut(s)	792, 1041, 1125, 1698, 1793, 1964
ZraI	GACGTC	1 cut(s)	834

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.