Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0004609

Physical Location & Seq

Genomic Coordinates Forward (+)

54763205 .. 54771528

Gene Structure 8324 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG321900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGTCGTGGCTGAGATCGGCGGTGAACAAAGCCGTGGAGGTTGGGAACAGCAACAACCTCACCCGCACCGTCAGGAACTACGCCGATTCCGTCGTCCAGCAGGCCGGCCATGCCGTCGCTGAAGGCGCCAAGCGGTTTCAGGACCGACTGGGGAATCGGAGCTTCCGGAGCGTGAAGAAGAGTGTACAGAGATTGGAGGAAGCAGCTGTGTCGTGTAGAGGACCTGAAAGGGCTGAGATACTGAGGAGGTGGGTGATTCTGCTCAAAGAGGTGGAGAGACTGAAGCTGTCTCAGGCGGAAGAGAAGGAAAAGGCGGCGGAGCAGAGTAGTGGCGGTGGTGCTTCGGAGGATGTTAGTGATATTCGGAGGAAGATTTCGACGGTTTTGTATTATGACTCTGATGCTGGAGGCGAGCCGATGAATTTCTGCGACGTTTTTCTTCTTAGTCAGGCTCTGGAGGGCATTACATTGTCTATGATTCTTGAAGCACCAAATGATGAAGAGGTTGCCTTGCTCTCGGAGATGTTTAGGCTCTGTCTTACCGGAGGGAAAGAAGTTCACAATGCTATTGTGAGCAGCATACAGGACTTGGCAACGGCTTTTTCGAGCTACAACGATGAAGTATTGGTAAAGCGAGAGGAATTGCTTCAATTTGCACAGAGTGCAATTACAGGATTGAAGATAAATGCTGATCTTGGAAGAATAGATGATGAGGCCTCTAGGTTAAAGAAGAAGCTTGATGGAAGGACACCACTGCTGACGTCTCCTTCAACTGAAGGTCATGACAAAGTATCGGAAGAAACAAAATTGGAAACAGTACAGGCATTAAAAAAAGCACTTGCACAAATTCGAGCTTGTTCCAGATTAGAAGGGCTTTTACTGAAGAAGAAACTCTTGAACAGTGGAGATTCTTCAGAGATCCATGCTCAAAAAGTTGACAAATTGAAGGTTTTATCAGAATCTCTTGCTAGCTCCTCTGCAAAAGCGGAAAATCGTATTTCAGATAACAGAATCCAAAAGGAGGAAGCTCTAAAAGTTCGTGCGTCTAAAGCTAGTGAAGTGGGTGAAAGAGAGAAGGAAATAGAAGCTGAGGTTGCAGAGCTTGAAAGACAAAGGGATGATCTTGAGGCTCAATTGAAAAAGGTCAATATCTCCTTGGCTGCAGCTAATTCTCGCCTTCGCAATACCAGGGAAGAGAGGGACCAATTTGAGGAAGCTAATACCAAGATTGTGGCTCACTTGGAAACAAAGGAAGATGAACTGTCAAAATCCATTGCTTCATGTAAGGTCGAGGCAGATGTTCTACATACATGGATTAATTTTTTGGAAGATACTTGGGTACTCAAGTGCTCATATGCAGAGACCAAGGAGAAGCAGGTCAATGATGAATTGGAGAAACATGAGCACTATTTTGTGAACTTCGCCATTGATCTTCTCTCTGCCTACAAGAAAGAGTTGGGGCCTTCTATCAGCCGTATAGGGAAATTTGTGGAGAATCTTAAGAATTTGAGCAAGAAGTCAGGGGTGGTATCTAATGCAGAGAATGAGGATTCTAAAGCATTAAATCCATTAAGAAGTCTTGAGGAGGAATATTTGGATCATGAAACCAAGATTATTACCACCTTCAGTGTAGTTGATAATATGAAATCGCACTTTTATTCAGAACAGGCTAGGACTTCCAGGAGAGAAGACCCAAGGGTTAAGGAGCTGTTCGATGATATTGAAAAACTAAGAGCACAATTTGAAGCTGTTGAGAGACCAATTCTAGAAATAGAGACTCCAATTCCCCAAGCTGGAACTCCGTCTGATGACAAGCTGCAGAGTGCTCCATCTGATCTCTCAGCAGAGGGCTCAGCTGCACAGAAAGCTGAGACAGTGAAGCATTCAAAGTCGGGTGCAGTCAAGGTAGAGCAAGTGCTCGACCCTGAAGATGACCTAGCAAAGCTCGAATCAGAGTTTGGCAAGGTTGGTCAAGACTACTCAACAGAGGAGGTGGGTGAGTGGGAATTTGACGAGCTTGAGAGGGAACTAAGATCTGGTGATTCATCAACTACCAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

686

Amino Acids

76.65

Weight (kDa)

5.18

Isoelectric Point (pI)

45.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004609)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13560
fragaria_vesca	FvH4_7g20871 FvH4_7g20871
malus_domestica	MD07G1186500.v1.1 MD13G1157000.v1.1
prunus_persica	Prupe.2G225300_v2.0.a1
pyrus_communis	pycom01g14560 pycom07g17780
rosa_chinensis	RchiOBHm_Chr1g0365121 RchiOBHm_Chr7g0221351
rosa_laevigata	RLG00000014849 RLG00000027440 RLG00000028869
rosa_multiflora	Rmu_co8467635.1_g000001 Rmu_sc0001688.1_g000008
rosa_roxburghii	Rroxscaffold_4G00291410 Rroxscaffold_4G00291920
rosa_rugosa	Rorug01G0320000 Rorug01G0320100
rosa_samantha	Rh1AG328700 Rh1BG290300 Rh1CG307000 Rh1DG321900 Rh2DG217200 Rh3AG000700 Rh3BG000500 Rh3CG000500 Rh3DG000700 Rh7AG341600 Rh7CG359500
rosa_wichuraiana	Rw1G029170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	764
Acc36I	ACCTGC	1 cut(s)	1366
AccB1I	GGYRCC	1 cut(s)	125
AccIII	TCCGGA	1 cut(s)	165
AciI	CCGC	8 cut(s)	20, 64, 133, 296, 314, 317, 333, 986
AclWI	GGATC	2 cut(s)	913, 1605
AcoI	YGGCCR	1 cut(s)	106
AcsI	RAATTY	5 cut(s)	421, 846, 1484, 1504, 2006
AcuI	CTGAAG	7 cut(s)	141, 302, 795, 897, 902, 1609, 1947
AcyI	GRCGYC	2 cut(s)	126, 761
AdeI	CACNNNGTG	1 cut(s)	662
AfaI	GTAC	3 cut(s)	186, 819, 1341
AfiI	CCNNNNNNNGG	3 cut(s)	1021, 1210, 1793
AflII	CTTAAG	1 cut(s)	1499
AjnI	CCWGG	2 cut(s)	1187, 1679
AjuI	GAANNNNNNNTTGG	2 cut(s)	1941, 1973
Alw21I	GWGCWC	5 cut(s)	1352, 1407, 1738, 1828, 1920
Alw26I	GTCTC	7 cut(s)	271, 294, 768, 1355, 1750, 1769, 1865
AlwI	GGATC	2 cut(s)	913, 1605
AlwNI	CAGNNNCTG	1 cut(s)	454
Aor13HI	TCCGGA	1 cut(s)	165
AoxI	GGCC	4 cut(s)	102, 106, 714, 1460
ApeKI	GCWGC	6 cut(s)	203, 576, 1160, 1163, 1816, 1856
ApoI	RAATTY	5 cut(s)	421, 846, 1484, 1504, 2006
AseI	ATTAAT	1 cut(s)	1317
Asp700I	GAANNNNTTC	1 cut(s)	645
AspLEI	GCGC	1 cut(s)	128
AspS9I	GGNCC	4 cut(s)	142, 221, 1201, 1460
AsuHPI	GGTGA	6 cut(s)	34, 52, 265, 1076, 2009, 2051
AsuNHI	GCTAGC	1 cut(s)	968
AvaII	GGWCC	3 cut(s)	142, 221, 1201
BaeI	ACNNNNGTAYC	4 cut(s)	1323, 1331, 1356, 1364
BanI	GGYRCC	1 cut(s)	125
BanII	GRGCYC	1 cut(s)	1853
BarI	GAAGNNNNNNTAC	2 cut(s)	861, 893
BbsI	GAAGAC	1 cut(s)	1695
Bbv12I	GWGCWC	5 cut(s)	1352, 1407, 1738, 1828, 1920
BbvCI	CCTCAGC	1 cut(s)	1089
BbvI	GCAGC	6 cut(s)	215, 588, 1147, 1175, 1803, 1843
BccI	CCATC	2 cut(s)	734, 1837
BceAI	ACGGC	4 cut(s)	17, 98, 612, 1458
BcgI	CGANNNNNNTGC	2 cut(s)	192, 226
BciT130I	CCWGG	2 cut(s)	1189, 1681
BcoDI	GTCTC	7 cut(s)	271, 294, 768, 1355, 1750, 1769, 1865
BfaI	CTAG	6 cut(s)	720, 969, 1053, 1671, 1766, 1937
BfmI	CTRYAG	2 cut(s)	1161, 1817
BfoI	RGCGCY	1 cut(s)	129
BfrI	CTTAAG	1 cut(s)	1499
BfuAI	ACCTGC	1 cut(s)	1366
BglII	AGATCT	1 cut(s)	2033
BisI	GCNGC	7 cut(s)	204, 315, 577, 1161, 1164, 1817, 1857
BlpI	GCTNAGC	1 cut(s)	1852
BlsI	GCNGC	7 cut(s)	205, 316, 578, 1162, 1165, 1818, 1858
Bme1390I	CCNGG	2 cut(s)	1189, 1681
Bme18I	GGWCC	3 cut(s)	142, 221, 1201
BmgT120I	GGNCC	4 cut(s)	142, 221, 1201, 1460
BmiI	GGNNCC	3 cut(s)	127, 1202, 1461
BmrFI	CCNGG	2 cut(s)	1189, 1681
BmrI	ACTGGG	1 cut(s)	158
BmsI	GCATC	1 cut(s)	391
BmtI	GCTAGC	1 cut(s)	972
BmuI	ACTGGG	1 cut(s)	158
BpiI	GAAGAC	1 cut(s)	1695
BpmI	CTGGAG	2 cut(s)	426, 476
Bpu10I	CCTNAGC	1 cut(s)	1089
Bpu1102I	GCTNAGC	1 cut(s)	1852
BpuEI	CTTGAG	4 cut(s)	1145, 1328, 1601, 2039
BsaHI	GRCGYC	2 cut(s)	126, 761
BsaI	GGTCTC	2 cut(s)	1355, 1750
BsaJI	CCNNGG	5 cut(s)	33, 1155, 1188, 1365, 1694
BsaWI	WCCGGW	2 cut(s)	165, 542
Bsc4I	CCNNNNNNNGG	3 cut(s)	1021, 1210, 1793
Bse118I	RCCGGY	1 cut(s)	104
Bse1I	ACTGG	1 cut(s)	153
Bse3DI	GCAATG	1 cut(s)	1272
BseAI	TCCGGA	1 cut(s)	165
BseBI	CCWGG	2 cut(s)	1189, 1681
BseDI	CCNNGG	5 cut(s)	33, 1155, 1188, 1365, 1694
BseGI	GGATG	2 cut(s)	355, 1123
BseLI	CCNNNNNNNGG	3 cut(s)	1021, 1210, 1793
BseMI	GCAATG	1 cut(s)	1272
BseMII	CTCAG	7 cut(s)	225, 233, 305, 1080, 1854, 1860, 1866
BseNI	ACTGG	1 cut(s)	153
BseRI	GAGGAG	4 cut(s)	259, 964, 1598, 2003
BseXI	GCAGC	6 cut(s)	215, 588, 1147, 1175, 1803, 1843
BsgI	GTGCAG	2 cut(s)	1842, 1917
BshFI	GGCC	4 cut(s)	104, 108, 716, 1462
BshNI	GGYRCC	1 cut(s)	125
BsiHKAI	GWGCWC	5 cut(s)	1352, 1407, 1738, 1828, 1920
BsiSI	CCGG	3 cut(s)	105, 166, 543
BslFI	GGGAC	1 cut(s)	1214
BslI	CCNNNNNNNGG	3 cut(s)	1021, 1210, 1793
BsmAI	GTCTC	7 cut(s)	271, 294, 768, 1355, 1750, 1769, 1865
BsmBI	CGTCTC	1 cut(s)	768
BsmFI	GGGAC	1 cut(s)	1214
BsmI	GAATGC	1 cut(s)	1882
BsnI	GGCC	4 cut(s)	104, 108, 716, 1462
Bso31I	GGTCTC	2 cut(s)	1355, 1750
Bsp1286I	GDGCHC	6 cut(s)	1352, 1407, 1738, 1828, 1853, 1920
Bsp13I	TCCGGA	1 cut(s)	165
Bsp1407I	TGTACA	1 cut(s)	184
Bsp143I	GATC	8 cut(s)	14, 691, 918, 1120, 1429, 1597, 1834, 2033
Bsp1720I	GCTNAGC	1 cut(s)	1852
BspACI	CCGC	8 cut(s)	20, 64, 133, 296, 314, 317, 333, 986
BspANI	GGCC	4 cut(s)	104, 108, 716, 1462
BspCNI	CTCAG	7 cut(s)	226, 234, 304, 1081, 1853, 1861, 1865
BspEI	TCCGGA	1 cut(s)	165
BspHI	TCATGA	2 cut(s)	781, 1600
BspLI	GGNNCC	3 cut(s)	127, 1202, 1461
BspMAI	CTGCAG	2 cut(s)	1165, 1821
BspMI	ACCTGC	1 cut(s)	1366
BspOI	GCTAGC	1 cut(s)	972
BspPI	GGATC	2 cut(s)	913, 1605
BspT107I	GGYRCC	1 cut(s)	125
BspTI	CTTAAG	1 cut(s)	1499
BspTNI	GGTCTC	2 cut(s)	1355, 1750
BsrDI	GCAATG	1 cut(s)	1272
BsrFI	RCCGGY	1 cut(s)	104
BsrGI	TGTACA	1 cut(s)	184
BsrI	ACTGG	1 cut(s)	153
BssAI	RCCGGY	1 cut(s)	104
BssECI	CCNNGG	5 cut(s)	33, 1155, 1188, 1365, 1694
BssMI	GATC	8 cut(s)	14, 691, 918, 1120, 1429, 1597, 1834, 2033
BssNI	GRCGYC	2 cut(s)	126, 761
BssT1I	CCWWGG	3 cut(s)	1155, 1365, 1694
Bst2UI	CCWGG	2 cut(s)	1189, 1681
Bst4CI	ACNGT	6 cut(s)	70, 382, 817, 902, 1263, 1876
Bst6I	CTCTTC	4 cut(s)	173, 294, 495, 1188
BstACI	GRCGYC	2 cut(s)	126, 761
BstAFI	CTTAAG	1 cut(s)	1499
BstAPI	GCANNNNNTGC	1 cut(s)	662
BstAUI	TGTACA	1 cut(s)	184
BstC8I	GCNNGC	4 cut(s)	102, 106, 413, 970
BstDSI	CCRYGG	1 cut(s)	33
BstF5I	GGATG	2 cut(s)	355, 1123
BstH2I	RGCGCY	1 cut(s)	129
BstHHI	GCGC	1 cut(s)	128
BstKTI	GATC	8 cut(s)	17, 694, 921, 1123, 1432, 1600, 1837, 2036
BstMAI	GTCTC	7 cut(s)	271, 294, 768, 1355, 1750, 1769, 1865
BstMBI	GATC	8 cut(s)	14, 691, 918, 1120, 1429, 1597, 1834, 2033
BstMWI	GCNNNNNNNGC	7 cut(s)	110, 125, 168, 662, 1049, 1094, 1865
BstNI	CCWGG	2 cut(s)	1189, 1681
BstSCI	CCNGG	2 cut(s)	1187, 1679
BstSFI	CTRYAG	2 cut(s)	1161, 1817
BstV1I	GCAGC	6 cut(s)	215, 588, 1147, 1175, 1803, 1843
BstV2I	GAAGAC	1 cut(s)	1695
BstX2I	RGATCY	2 cut(s)	918, 2033
BstXI	CCANNNNNNTGG	1 cut(s)	1231
BstYI	RGATCY	2 cut(s)	918, 2033
BsuRI	GGCC	4 cut(s)	104, 108, 716, 1462
BtgI	CCRYGG	1 cut(s)	33
BtsCI	GGATG	2 cut(s)	355, 1123
BtsI	GCAGTG	1 cut(s)	752
BtsIMutI	CAGTG	4 cut(s)	752, 907, 1633, 1881
BveI	ACCTGC	1 cut(s)	1366
Cac8I	GCNNGC	4 cut(s)	102, 106, 413, 970
CaiI	CAGNNNCTG	1 cut(s)	454
CciI	TCATGA	2 cut(s)	781, 1600
CfoI	GCGC	1 cut(s)	128
Cfr10I	RCCGGY	1 cut(s)	104
Cfr13I	GGNCC	4 cut(s)	142, 221, 1201, 1460
CseI	GACGC	1 cut(s)	1032
Csp6I	GTAC	3 cut(s)	185, 818, 1340
CviAII	CATG	7 cut(s)	110, 782, 923, 1281, 1311, 1400, 1601
CviQI	GTAC	3 cut(s)	185, 818, 1340
DinI	GGCGCC	1 cut(s)	127
DpnI	GATC	8 cut(s)	16, 693, 920, 1122, 1431, 1599, 1836, 2035
DpnII	GATC	8 cut(s)	14, 691, 918, 1120, 1429, 1597, 1834, 2033
DraIII	CACNNNGTG	1 cut(s)	662
EaeI	YGGCCR	1 cut(s)	106
Eam1104I	CTCTTC	4 cut(s)	173, 294, 495, 1188
EarI	CTCTTC	4 cut(s)	173, 294, 495, 1188
EciI	GGCGGA	2 cut(s)	311, 332
Eco130I	CCWWGG	3 cut(s)	1155, 1365, 1694
Eco147I	AGGCCT	1 cut(s)	716
Eco24I	GRGCYC	1 cut(s)	1853
Eco31I	GGTCTC	2 cut(s)	1355, 1750
Eco47I	GGWCC	3 cut(s)	142, 221, 1201
Eco57I	CTGAAG	7 cut(s)	141, 302, 795, 897, 902, 1609, 1947
EcoO109I	RGGNCCY	2 cut(s)	221, 1460
EcoRII	CCWGG	2 cut(s)	1187, 1679
EcoT14I	CCWWGG	3 cut(s)	1155, 1365, 1694
EcoT38I	GRGCYC	1 cut(s)	1853
EgeI	GGCGCC	1 cut(s)	127
EheI	GGCGCC	1 cut(s)	127
ErhI	CCWWGG	3 cut(s)	1155, 1365, 1694
Esp3I	CGTCTC	1 cut(s)	768
FaeI	CATG	7 cut(s)	113, 785, 926, 1284, 1314, 1403, 1604
FalI	AAGNNNNNCTT	2 cut(s)	878, 910
FaqI	GGGAC	1 cut(s)	1214
FatI	CATG	7 cut(s)	109, 781, 922, 1280, 1310, 1399, 1600
FauI	CCCGC	1 cut(s)	71
FauNDI	CATATG	1 cut(s)	1354
Fnu4HI	GCNGC	7 cut(s)	204, 315, 577, 1161, 1164, 1817, 1857
FokI	GGATG	2 cut(s)	362, 1130
FriOI	GRGCYC	1 cut(s)	1853
FseI	GGCCGGCC	1 cut(s)	108
Fsp4HI	GCNGC	7 cut(s)	204, 315, 577, 1161, 1164, 1817, 1857
FspBI	CTAG	6 cut(s)	720, 969, 1053, 1671, 1766, 1937
GlaI	GCGC	1 cut(s)	127
GluI	GCNGC	7 cut(s)	204, 315, 577, 1161, 1164, 1817, 1857
GsuI	CTGGAG	2 cut(s)	426, 476
HaeII	RGCGCY	1 cut(s)	129
HaeIII	GGCC	4 cut(s)	104, 108, 716, 1462
HapII	CCGG	3 cut(s)	105, 166, 543
HgaI	GACGC	1 cut(s)	1032
HhaI	GCGC	1 cut(s)	128
Hin1I	GRCGYC	2 cut(s)	126, 761
Hin1II	CATG	7 cut(s)	113, 785, 926, 1284, 1314, 1403, 1604
Hin6I	GCGC	1 cut(s)	126
HinP1I	GCGC	1 cut(s)	126
HincII	GTYRAC	1 cut(s)	937
HindII	GTYRAC	1 cut(s)	937
HindIII	AAGCTT	1 cut(s)	734
HpaII	CCGG	3 cut(s)	105, 166, 543
HphI	GGTGA	6 cut(s)	34, 52, 265, 1076, 2009, 2051
Hpy166II	GTNNAC	5 cut(s)	25, 185, 559, 937, 1417
Hpy8I	GTNNAC	5 cut(s)	25, 185, 559, 937, 1417
Hpy99I	CGWCG	4 cut(s)	95, 119, 382, 434
HpyCH4III	ACNGT	6 cut(s)	70, 382, 817, 902, 1263, 1876
HpyCH4IV	ACGT	2 cut(s)	432, 761
HpyF10VI	GCNNNNNNNGC	7 cut(s)	110, 125, 168, 662, 1049, 1094, 1865
HpySE526I	ACGT	2 cut(s)	432, 761
Hsp92I	GRCGYC	2 cut(s)	126, 761
Hsp92II	CATG	7 cut(s)	113, 785, 926, 1284, 1314, 1403, 1604
HspAI	GCGC	1 cut(s)	126
KasI	GGCGCC	1 cut(s)	125
Kpn2I	TCCGGA	1 cut(s)	165
KroI	GCCGGC	1 cut(s)	104
KroNI	GCCGGC	1 cut(s)	106
Kzo9I	GATC	8 cut(s)	14, 691, 918, 1120, 1429, 1597, 1834, 2033
LmnI	GCTCC	6 cut(s)	159, 168, 319, 977, 1705, 1831
Lsp1109I	GCAGC	6 cut(s)	215, 588, 1147, 1175, 1803, 1843
LweI	GCATC	1 cut(s)	391
MaeI	CTAG	6 cut(s)	720, 969, 1053, 1671, 1766, 1937
MaeII	ACGT	2 cut(s)	432, 761
MalI	GATC	8 cut(s)	16, 693, 920, 1122, 1431, 1599, 1836, 2035
MboI	GATC	8 cut(s)	14, 691, 918, 1120, 1429, 1597, 1834, 2033
MfeI	CAATTG	1 cut(s)	1133
MflI	RGATCY	2 cut(s)	918, 2033
MhlI	GDGCHC	6 cut(s)	1352, 1407, 1738, 1828, 1853, 1920
Mly113I	GGCGCC	1 cut(s)	126
MlyI	GAGTC	2 cut(s)	389, 1771
MroI	TCCGGA	1 cut(s)	165
MroNI	GCCGGC	1 cut(s)	104
MroXI	GAANNNNTTC	1 cut(s)	645
MseI	TTAA	7 cut(s)	725, 827, 1317, 1500, 1562, 1571, 1701
MspA1I	CMGCKG	2 cut(s)	206, 1856
MspCI	CTTAAG	1 cut(s)	1499
MspI	CCGG	3 cut(s)	105, 166, 543
MspR9I	CCNGG	2 cut(s)	1189, 1681
MunI	CAATTG	1 cut(s)	1133
Mva1269I	GAATGC	1 cut(s)	1882
MvaI	CCWGG	2 cut(s)	1189, 1681
MwoI	GCNNNNNNNGC	7 cut(s)	110, 125, 168, 662, 1049, 1094, 1865
NaeI	GCCGGC	1 cut(s)	106
NarI	GGCGCC	1 cut(s)	126
NdeI	CATATG	1 cut(s)	1354
NdeII	GATC	8 cut(s)	14, 691, 918, 1120, 1429, 1597, 1834, 2033
NgoMIV	GCCGGC	1 cut(s)	104
NheI	GCTAGC	1 cut(s)	968
NlaIII	CATG	7 cut(s)	113, 785, 926, 1284, 1314, 1403, 1604
NlaIV	GGNNCC	3 cut(s)	127, 1202, 1461
PagI	TCATGA	2 cut(s)	781, 1600
PceI	AGGCCT	1 cut(s)	716
PcsI	WCGNNNNNNNCGW	2 cut(s)	87, 602
PctI	GAATGC	1 cut(s)	1882
PdiI	GCCGGC	1 cut(s)	106
PdmI	GAANNNNTTC	1 cut(s)	645
PfoI	TCCNGGA	1 cut(s)	1679
PkrI	GCNGC	7 cut(s)	205, 316, 578, 1162, 1165, 1818, 1858
PleI	GAGTC	2 cut(s)	389, 1771
PluTI	GGCGCC	1 cut(s)	129
PpsI	GAGTC	2 cut(s)	389, 1771
PpuMI	RGGWCCY	1 cut(s)	221
PshBI	ATTAAT	1 cut(s)	1317
Psp5II	RGGWCCY	1 cut(s)	221
Psp6I	CCWGG	2 cut(s)	1187, 1679
PspGI	CCWGG	2 cut(s)	1187, 1679
PspN4I	GGNNCC	3 cut(s)	127, 1202, 1461
PspPI	GGNCC	4 cut(s)	142, 221, 1201, 1460
PspPPI	RGGWCCY	1 cut(s)	221
PstI	CTGCAG	2 cut(s)	1165, 1821
PstNI	CAGNNNCTG	1 cut(s)	454
PsuI	RGATCY	2 cut(s)	918, 2033
PvuII	CAGCTG	2 cut(s)	206, 1856
RigI	GGCCGGCC	1 cut(s)	108
RsaI	GTAC	3 cut(s)	186, 819, 1341
RsaNI	GTAC	3 cut(s)	185, 818, 1340
SaqAI	TTAA	7 cut(s)	725, 827, 1317, 1500, 1562, 1571, 1701
SatI	GCNGC	7 cut(s)	204, 315, 577, 1161, 1164, 1817, 1857
Sau3AI	GATC	8 cut(s)	14, 691, 918, 1120, 1429, 1597, 1834, 2033
Sau96I	GGNCC	4 cut(s)	142, 221, 1201, 1460
SchI	GAGTC	2 cut(s)	389, 1771
ScrFI	CCNGG	2 cut(s)	1189, 1681
SduI	GDGCHC	6 cut(s)	1352, 1407, 1738, 1828, 1853, 1920
SfaNI	GCATC	1 cut(s)	391
SfcI	CTRYAG	2 cut(s)	1161, 1817
SfoI	GGCGCC	1 cut(s)	127
SinI	GGWCC	3 cut(s)	142, 221, 1201
SmlI	CTYRAG	5 cut(s)	1124, 1343, 1499, 1580, 2018
SmoI	CTYRAG	5 cut(s)	1124, 1343, 1499, 1580, 2018
SseBI	AGGCCT	1 cut(s)	716
SsiI	CCGC	8 cut(s)	20, 64, 133, 296, 314, 317, 333, 986
SspDI	GGCGCC	1 cut(s)	125
SspI	AATATT	1 cut(s)	1592
SspMI	CTAG	6 cut(s)	720, 969, 1053, 1671, 1766, 1937
StuI	AGGCCT	1 cut(s)	716
StyD4I	CCNGG	2 cut(s)	1187, 1679
StyI	CCWWGG	3 cut(s)	1155, 1365, 1694
TaaI	ACNGT	6 cut(s)	70, 382, 817, 902, 1263, 1876
TaiI	ACGT	2 cut(s)	435, 764
TaqI	TCGA	7 cut(s)	377, 605, 850, 1290, 1713, 1920, 1947
TaqII	GACCGA	1 cut(s)	159
TatI	WGTACW	2 cut(s)	184, 817
TauI	GCSGC	1 cut(s)	317
Tru1I	TTAA	7 cut(s)	725, 827, 1317, 1500, 1562, 1571, 1701
Tru9I	TTAA	7 cut(s)	725, 827, 1317, 1500, 1562, 1571, 1701
TscAI	CASTG	4 cut(s)	759, 907, 1633, 1881
TseI	GCWGC	6 cut(s)	203, 576, 1160, 1163, 1816, 1856
TspDTI	ATGAA	9 cut(s)	434, 513, 633, 1269, 1272, 1401, 1617, 1658, 2034
TspGWI	ACGGA	2 cut(s)	79, 1791
TspRI	CASTG	4 cut(s)	759, 907, 1633, 1881
Vha464I	CTTAAG	1 cut(s)	1499
VpaK11BI	GGWCC	3 cut(s)	142, 221, 1201
VspI	ATTAAT	1 cut(s)	1317
XapI	RAATTY	5 cut(s)	421, 846, 1484, 1504, 2006
XbaI	TCTAGA	1 cut(s)	1765
XmnI	GAANNNNTTC	1 cut(s)	645
XspI	CTAG	6 cut(s)	720, 969, 1053, 1671, 1766, 1937
ZraI	GACGTC	1 cut(s)	762

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.