Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005842

Physical Location & Seq

Genomic Coordinates Reverse (-)

4733658 .. 4736645

Gene Structure 2988 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G14690.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 654 bp

ATGGAGGAAAACCCGCATCGAGTTTCACGTAGAAACCATGGCGGGACCCACTGTCAAAACGACGCCGTGGACGAAGAGAACCGTCGACGACGGCATAACCACCACACTCACGGCGACGAAGTCAAATGCTCCAGTAAGAGATGCCGATCGTGGGCGGCTGCGGCGATTGCTGACTGTGTAGCGCTTTGTTGCTGTCCATGTGCGATCATCAACCTTCTTACTCTTACTCTCGTCAAAGTCCCGTGGATGATCGGACGGCGATGTCTCGGCGGCGGCGGTCGGAATAAGAAGAAGCGGAGAGTAATACACAGGAGGAAACGCCGCGGGAATATCAACGGTGAAGATGAGTTTTATCATCATAATAACCATCACCGCCGGTTTGAGACAGCCGAGGAGGGTGAGAAATGCGGCTGCGGCGGTGGCGGAGGAGGATGTTATGGCGGCGGAGATTATGATGATCACCGGTTTGTGGTAGAGAGAGATGGGAGTTTAACGAAGGAGGAGGAGGAGGAGGAGAGAACGACGTCGTGTAAAGGAGAAGATCATGATGAGTCGCGAATAAGTGCAAGAGTTGAAGCCGAGAGAGTGTGGTTAGAGTTGTATCAGATTGGTCATCTTGGATTTGGTAGAGTCTCTTTCACTGGAATTCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

217

Amino Acids

24.65

Weight (kDa)

8.23

Isoelectric Point (pI)

71.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005842)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01516 AT3G01516 AT5G14690 AT5G14690
fragaria_vesca	FvH4_6g50860
malus_domestica	MD09G1031300.v1.1 MD17G1033200.v1.1
prunus_persica	Prupe.3G286300_v2.0.a1
pyrus_communis	pycom111g02500
rosa_chinensis	RchiOBHm_Chr2g0172251
rosa_laevigata	RLG00000014670
rosa_multiflora	Rmu_sc0009513.1_g000004 Rmu_sc0024549.1_g000007 Rmu_sc0041056.1_g000001
rosa_roxburghii	Rroxscaffold_2G00080030 Rroxscaffold_2G00082460
rosa_rugosa	Rorug02G0558100
rosa_samantha	Rh2CG613700 Rh2DG661600 Rh4DG100700 Rh5AG268800 Rh5AG346300 Rh5BG357000 Rh5DG372400 Rh7AG115100 Rh7CG120300
rosa_wichuraiana	Rw2G052420 Rw5G032700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	261
AatII	GACGTC	1 cut(s)	527
AccI	GTMKAC	1 cut(s)	85
AccII	CGCG	2 cut(s)	324, 556
AcsI	RAATTY	1 cut(s)	645
AcyI	GRCGYC	2 cut(s)	63, 524
AfeI	AGCGCT	1 cut(s)	183
AfiI	CCNNNNNNNGG	2 cut(s)	151, 469
AgeI	ACCGGT	1 cut(s)	462
AgsI	TTSAA	2 cut(s)	575, 650
AhdI	GACNNNNNGTC	1 cut(s)	51
Alw26I	GTCTC	3 cut(s)	269, 377, 637
Aor51HI	AGCGCT	1 cut(s)	183
ApeKI	GCWGC	2 cut(s)	158, 411
ApoI	RAATTY	1 cut(s)	645
AsiGI	ACCGGT	1 cut(s)	462
AspLEI	GCGC	1 cut(s)	184
AspS9I	GGNCC	1 cut(s)	45
AsuHPI	GGTGA	4 cut(s)	350, 362, 410, 452
AvaII	GGWCC	1 cut(s)	45
BbvI	GCAGC	2 cut(s)	145, 398
BccI	CCATC	2 cut(s)	375, 476
BceAI	ACGGC	4 cut(s)	50, 107, 127, 272
BclI	TGATCA	1 cut(s)	457
BcoDI	GTCTC	3 cut(s)	269, 377, 637
BfoI	RGCGCY	1 cut(s)	185
Bme18I	GGWCC	1 cut(s)	45
BmeRI	GACNNNNNGTC	1 cut(s)	51
BmgT120I	GGNCC	1 cut(s)	45
BmiI	GGNNCC	2 cut(s)	46, 47
BmsI	GCATC	2 cut(s)	25, 131
BpmI	CTGGAG	1 cut(s)	115
BsaAI	YACGTR	1 cut(s)	29
BsaBI	GATNNNNATC	1 cut(s)	145
BsaHI	GRCGYC	2 cut(s)	63, 524
BsaJI	CCNNGG	5 cut(s)	37, 66, 242, 322, 390
BsaWI	WCCGGW	1 cut(s)	462
Bsc4I	CCNNNNNNNGG	2 cut(s)	151, 469
Bse118I	RCCGGY	2 cut(s)	375, 462
Bse1I	ACTGG	2 cut(s)	132, 646
Bse8I	GATNNNNATC	1 cut(s)	145
BseDI	CCNNGG	5 cut(s)	37, 66, 242, 322, 390
BseGI	GGATG	2 cut(s)	252, 437
BseJI	GATNNNNATC	1 cut(s)	145
BseLI	CCNNNNNNNGG	2 cut(s)	151, 469
BseNI	ACTGG	2 cut(s)	132, 646
BseRI	GAGGAG	7 cut(s)	407, 441, 515, 518, 521, 524, 527
BseXI	GCAGC	2 cut(s)	145, 398
Bsh1236I	CGCG	2 cut(s)	324, 556
Bsh1285I	CGRYCG	2 cut(s)	149, 280
BshTI	ACCGGT	1 cut(s)	462
BsiEI	CGRYCG	2 cut(s)	149, 280
BsiSI	CCGG	2 cut(s)	376, 463
BslFI	GGGAC	2 cut(s)	58, 224
BslI	CCNNNNNNNGG	2 cut(s)	151, 469
BsmAI	GTCTC	3 cut(s)	269, 377, 637
BsmFI	GGGAC	2 cut(s)	58, 224
Bsp143I	GATC	5 cut(s)	146, 204, 249, 457, 541
Bsp19I	CCATGG	1 cut(s)	37
Bsp68I	TCGCGA	1 cut(s)	556
BspFNI	CGCG	2 cut(s)	324, 556
BspHI	TCATGA	1 cut(s)	544
BspLI	GGNNCC	2 cut(s)	46, 47
BsrFI	RCCGGY	2 cut(s)	375, 462
BsrI	ACTGG	2 cut(s)	132, 646
BssAI	RCCGGY	2 cut(s)	375, 462
BssECI	CCNNGG	5 cut(s)	37, 66, 242, 322, 390
BssMI	GATC	5 cut(s)	146, 204, 249, 457, 541
BssNI	GRCGYC	2 cut(s)	63, 524
BssT1I	CCWWGG	1 cut(s)	37
Bst4CI	ACNGT	4 cut(s)	53, 83, 176, 338
Bst6I	CTCTTC	1 cut(s)	69
BstACI	GRCGYC	2 cut(s)	63, 524
BstBAI	YACGTR	1 cut(s)	29
BstDSI	CCRYGG	4 cut(s)	37, 66, 242, 322
BstF5I	GGATG	2 cut(s)	252, 437
BstFNI	CGCG	2 cut(s)	324, 556
BstH2I	RGCGCY	1 cut(s)	185
BstHHI	GCGC	1 cut(s)	184
BstKTI	GATC	5 cut(s)	149, 207, 252, 460, 544
BstMAI	GTCTC	3 cut(s)	269, 377, 637
BstMBI	GATC	5 cut(s)	146, 204, 249, 457, 541
BstMCI	CGRYCG	2 cut(s)	149, 280
BstMWI	GCNNNNNNNGC	4 cut(s)	161, 167, 414, 420
BstUI	CGCG	2 cut(s)	324, 556
BstV1I	GCAGC	2 cut(s)	145, 398
BtgI	CCRYGG	4 cut(s)	37, 66, 242, 322
BtgZI	GCGATG	1 cut(s)	274
BtsCI	GGATG	2 cut(s)	252, 437
BtsIMutI	CAGTG	2 cut(s)	49, 639
BtuMI	TCGCGA	1 cut(s)	556
CciI	TCATGA	1 cut(s)	544
CfoI	GCGC	1 cut(s)	184
Cfr10I	RCCGGY	2 cut(s)	375, 462
Cfr13I	GGNCC	1 cut(s)	45
Cfr42I	CCGCGG	1 cut(s)	325
CseI	GACGC	1 cut(s)	71
CspAI	ACCGGT	1 cut(s)	462
CviAII	CATG	3 cut(s)	38, 198, 545
CviJI	RGCY	4 cut(s)	158, 389, 411, 578
CviKI_1	RGCY	4 cut(s)	158, 389, 411, 578
DpnI	GATC	5 cut(s)	148, 206, 251, 459, 543
DpnII	GATC	5 cut(s)	146, 204, 249, 457, 541
DrdI	GACNNNNNNGTC	1 cut(s)	261
DriI	GACNNNNNGTC	1 cut(s)	51
DseDI	GACNNNNNNGTC	1 cut(s)	261
Eam1104I	CTCTTC	1 cut(s)	69
Eam1105I	GACNNNNNGTC	1 cut(s)	51
EarI	CTCTTC	1 cut(s)	69
EciI	GGCGGA	2 cut(s)	438, 459
Eco130I	CCWWGG	1 cut(s)	37
Eco47I	GGWCC	1 cut(s)	45
Eco47III	AGCGCT	1 cut(s)	183
EcoO109I	RGGNCCY	1 cut(s)	45
EcoRI	GAATTC	1 cut(s)	645
EcoT14I	CCWWGG	1 cut(s)	37
ErhI	CCWWGG	1 cut(s)	37
FaeI	CATG	3 cut(s)	41, 201, 548
FaiI	YATR	7 cut(s)	39, 96, 199, 360, 438, 453, 546
FaqI	GGGAC	2 cut(s)	58, 224
FatI	CATG	3 cut(s)	37, 197, 544
FauI	CCCGC	3 cut(s)	21, 35, 317
FbaI	TGATCA	1 cut(s)	457
FblI	GTMKAC	1 cut(s)	85
FokI	GGATG	2 cut(s)	259, 444
GlaI	GCGC	1 cut(s)	183
GsuI	CTGGAG	1 cut(s)	115
HaeII	RGCGCY	1 cut(s)	185
HapII	CCGG	2 cut(s)	376, 463
HgaI	GACGC	1 cut(s)	71
HhaI	GCGC	1 cut(s)	184
Hin1I	GRCGYC	2 cut(s)	63, 524
Hin1II	CATG	3 cut(s)	41, 201, 548
Hin6I	GCGC	1 cut(s)	182
HinP1I	GCGC	1 cut(s)	182
HincII	GTYRAC	1 cut(s)	86
HindII	GTYRAC	1 cut(s)	86
HinfI	GANTC	2 cut(s)	551, 630
HpaII	CCGG	2 cut(s)	376, 463
HphI	GGTGA	4 cut(s)	350, 362, 410, 452
Hpy166II	GTNNAC	2 cut(s)	70, 86
Hpy188I	TCNGA	3 cut(s)	254, 282, 606
Hpy188III	TCNNGA	2 cut(s)	545, 555
Hpy8I	GTNNAC	2 cut(s)	70, 86
Hpy99I	CGWCG	7 cut(s)	65, 87, 90, 93, 119, 526, 529
HpyAV	CCTTC	2 cut(s)	224, 490
HpyCH4III	ACNGT	4 cut(s)	53, 83, 176, 338
HpyCH4IV	ACGT	2 cut(s)	28, 524
HpyCH4V	TGCA	1 cut(s)	566
HpyF10VI	GCNNNNNNNGC	4 cut(s)	161, 167, 414, 420
HpySE526I	ACGT	2 cut(s)	28, 524
Hsp92I	GRCGYC	2 cut(s)	63, 524
Hsp92II	CATG	3 cut(s)	41, 201, 548
HspAI	GCGC	1 cut(s)	182
KflI	GGGWCCC	1 cut(s)	45
Ksp22I	TGATCA	1 cut(s)	457
KspI	CCGCGG	1 cut(s)	325
Kzo9I	GATC	5 cut(s)	146, 204, 249, 457, 541
LmnI	GCTCC	1 cut(s)	134
LpnPI	CCDG	5 cut(s)	145, 295, 389, 476, 627
Lsp1109I	GCAGC	2 cut(s)	145, 398
LweI	GCATC	2 cut(s)	25, 131
MaeII	ACGT	2 cut(s)	28, 524
MalI	GATC	5 cut(s)	148, 206, 251, 459, 543
MboI	GATC	5 cut(s)	146, 204, 249, 457, 541
MboII	GAAGA	4 cut(s)	86, 301, 353, 551
MluCI	AATT	1 cut(s)	645
MlyI	GAGTC	2 cut(s)	560, 639
MmeI	TCCRAC	1 cut(s)	260
MseI	TTAA	1 cut(s)	491
MspA1I	CMGCKG	1 cut(s)	324
MspI	CCGG	2 cut(s)	376, 463
MvnI	CGCG	2 cut(s)	324, 556
MwoI	GCNNNNNNNGC	4 cut(s)	161, 167, 414, 420
NcoI	CCATGG	1 cut(s)	37
NdeII	GATC	5 cut(s)	146, 204, 249, 457, 541
NlaIII	CATG	3 cut(s)	41, 201, 548
NlaIV	GGNNCC	2 cut(s)	46, 47
NmeAIII	GCCGAG	3 cut(s)	246, 415, 604
NruI	TCGCGA	1 cut(s)	556
PagI	TCATGA	1 cut(s)	544
PcsI	WCGNNNNNNNCGW	2 cut(s)	25, 69
PflFI	GACNNNGTC	1 cut(s)	119
PinAI	ACCGGT	1 cut(s)	462
Ple19I	CGATCG	1 cut(s)	149
PleI	GAGTC	2 cut(s)	559, 638
PpsI	GAGTC	2 cut(s)	559, 638
Ppu21I	YACGTR	1 cut(s)	29
PpuMI	RGGWCCY	1 cut(s)	45
Psp5II	RGGWCCY	1 cut(s)	45
PspN4I	GGNNCC	2 cut(s)	46, 47
PspPI	GGNCC	1 cut(s)	45
PspPPI	RGGWCCY	1 cut(s)	45
PsyI	GACNNNGTC	1 cut(s)	119
PvuI	CGATCG	1 cut(s)	149
RruI	TCGCGA	1 cut(s)	556
SacII	CCGCGG	1 cut(s)	325
SalI	GTCGAC	1 cut(s)	84
SaqAI	TTAA	1 cut(s)	491
Sau3AI	GATC	5 cut(s)	146, 204, 249, 457, 541
Sau96I	GGNCC	1 cut(s)	45
SchI	GAGTC	2 cut(s)	560, 639
SetI	ASST	3 cut(s)	31, 216, 527
SfaNI	GCATC	2 cut(s)	25, 131
Sfr303I	CCGCGG	1 cut(s)	325
SgrBI	CCGCGG	1 cut(s)	325
SgrDI	CGTCGACG	1 cut(s)	84
SinI	GGWCC	1 cut(s)	45
Sse9I	AATT	1 cut(s)	645
StyI	CCWWGG	1 cut(s)	37
TaaI	ACNGT	4 cut(s)	53, 83, 176, 338
TaiI	ACGT	2 cut(s)	31, 527
TaqI	TCGA	2 cut(s)	19, 85
TasI	AATT	1 cut(s)	645
TauI	GCSGC	8 cut(s)	158, 164, 273, 276, 324, 411, 417, 444
Tru1I	TTAA	1 cut(s)	491
Tru9I	TTAA	1 cut(s)	491
TscAI	CASTG	2 cut(s)	56, 646
TseI	GCWGC	2 cut(s)	158, 411
TspRI	CASTG	2 cut(s)	56, 646
Tth111I	GACNNNGTC	1 cut(s)	119
VpaK11BI	GGWCC	1 cut(s)	45
XapI	RAATTY	1 cut(s)	645
XmiI	GTMKAC	1 cut(s)	85
ZraI	GACGTC	1 cut(s)	525

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.